Warning: Permanently added '13.221.213.247' (ED25519) to the list of known hosts.

You can reproduce this build on your computer by running:

  sudo dnf install copr-rpmbuild
  /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/10611969-fedora-44-aarch64 --chroot fedora-44-aarch64


Version: 1.8
PID: 9569
Logging PID: 9571
Task:
{'allow_user_ssh': False,
 'appstream': False,
 'background': False,
 'build_id': 10611969,
 'buildroot_pkgs': [],
 'chroot': 'fedora-44-aarch64',
 'enable_net': False,
 'fedora_review': False,
 'git_hash': '8bf31e476de0a5f40798c63fcec26e0e54c4e73a',
 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/mhough/neurofedora/compucell3d',
 'isolation': 'default',
 'memory_reqs': 2048,
 'package_name': 'compucell3d',
 'package_version': '4.9.0-0.1.rc.20260615git780374e',
 'project_dirname': 'neurofedora',
 'project_name': 'neurofedora',
 'project_owner': 'mhough',
 'repo_priority': None,
 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/mhough/neurofedora/fedora-44-aarch64/',
            'id': 'copr_base',
            'name': 'Copr repository',
            'priority': None}],
 'sandbox': 'mhough/neurofedora--mhough',
 'source_json': {},
 'source_type': None,
 'ssh_public_keys': None,
 'storage': 0,
 'submitter': 'mhough',
 'tags': [],
 'task_id': '10611969-fedora-44-aarch64',
 'timeout': 18000,
 'uses_devel_repo': False,
 'with_opts': [],
 'without_opts': []}

Running: git clone https://copr-dist-git.fedorainfracloud.org/git/mhough/neurofedora/compucell3d /var/lib/copr-rpmbuild/workspace/workdir-y4thbh3h/compucell3d --depth 500 --no-single-branch --recursive

cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/mhough/neurofedora/compucell3d', '/var/lib/copr-rpmbuild/workspace/workdir-y4thbh3h/compucell3d', '--depth', '500', '--no-single-branch', '--recursive']
cwd: .
rc: 0
stdout: 
stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-y4thbh3h/compucell3d'...

Running: git checkout 8bf31e476de0a5f40798c63fcec26e0e54c4e73a --

cmd: ['git', 'checkout', '8bf31e476de0a5f40798c63fcec26e0e54c4e73a', '--']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-y4thbh3h/compucell3d
rc: 0
stdout: 
stderr: Note: switching to '8bf31e476de0a5f40798c63fcec26e0e54c4e73a'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:

  git switch -c <new-branch-name>

Or undo this operation with:

  git switch -

Turn off this advice by setting config variable advice.detachedHead to false

HEAD is now at 8bf31e4 automatic import of compucell3d

Running: dist-git-client sources

cmd: ['dist-git-client', 'sources']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-y4thbh3h/compucell3d
rc: 0
stdout: 
stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD
INFO: Reading stdout from command: git rev-parse HEAD
INFO: Reading sources specification file: sources
INFO: Downloading CompuCell3D-780374e5e17145de12452aeabd224710134fa53f.tar.gz
INFO: Reading stdout from command: curl --help all
INFO: Calling: curl -H Pragma: -H 'Accept-Encoding: identity' -o CompuCell3D-780374e5e17145de12452aeabd224710134fa53f.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/mhough/neurofedora/compucell3d/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f.tar.gz/md5/9d01ecf33c65877bdc9f30554b69dbbc/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f.tar.gz
  % Total    % Received % Xferd  Average Speed  Time    Time    Time   Current
                                 Dload  Upload  Total   Spent   Left   Speed
100  7.11M 100  7.11M   0      0 252.3M      0                              0
INFO: Reading stdout from command: md5sum CompuCell3D-780374e5e17145de12452aeabd224710134fa53f.tar.gz

tail: /var/lib/copr-rpmbuild/main.log: file truncated
Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-y4thbh3h/compucell3d/compucell3d.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-y4thbh3h/compucell3d --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1781709347.325201 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 6.7 starting (python version = 3.14.5, NVR = mock-6.7-1.fc44), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-y4thbh3h/compucell3d/compucell3d.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-y4thbh3h/compucell3d --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1781709347.325201 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
Start(bootstrap): init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish(bootstrap): init plugins
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-y4thbh3h/compucell3d/compucell3d.spec)  Config(fedora-44-aarch64)
Start: clean chroot
Finish: clean chroot
Mock Version: 6.7
INFO: Mock Version: 6.7
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-44-aarch64-bootstrap-1781709347.325201/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
INFO: Guessed host environment type: unknown
INFO: Using container image: registry.fedoraproject.org/fedora:44
INFO: Pulling image: registry.fedoraproject.org/fedora:44
INFO: Tagging container image as mock-bootstrap-667dd853-c700-4fd8-92df-4d884462b022
INFO: Checking that 9929ce941fd785c890e0cf9f321ef537663fb93c527265de0fe6474fed90d8db image matches host's architecture
INFO: Copy content of container 9929ce941fd785c890e0cf9f321ef537663fb93c527265de0fe6474fed90d8db to /var/lib/mock/fedora-44-aarch64-bootstrap-1781709347.325201/root
INFO: mounting 9929ce941fd785c890e0cf9f321ef537663fb93c527265de0fe6474fed90d8db with podman image mount
INFO: image 9929ce941fd785c890e0cf9f321ef537663fb93c527265de0fe6474fed90d8db as /var/lib/containers/storage/overlay/ec05b245ed33cc98128603f83e9988d6383540023619eec794e412b90243a859/merged
INFO: umounting image 9929ce941fd785c890e0cf9f321ef537663fb93c527265de0fe6474fed90d8db (/var/lib/containers/storage/overlay/ec05b245ed33cc98128603f83e9988d6383540023619eec794e412b90243a859/merged) with podman image umount
INFO: Removing image mock-bootstrap-667dd853-c700-4fd8-92df-4d884462b022
INFO: Package manager dnf5 detected and used (fallback)
INFO: Not updating bootstrap chroot, bootstrap_image_ready=True
Start(bootstrap): creating root cache
Finish(bootstrap): creating root cache
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-44-aarch64-1781709347.325201/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Package manager dnf5 detected and used (direct choice)
INFO: Buildroot is handled by package management downloaded with a bootstrap image:
  rpm-6.0.1-2.fc44.aarch64
  rpm-sequoia-1.10.2-2.fc44.aarch64
  dnf5-5.4.2.1-1.fc44.aarch64
  dnf5-plugins-5.4.2.1-1.fc44.aarch64
Start: installing minimal buildroot with dnf5
Updating and loading repositories:
 updates                                100% |   3.1 MiB/s |   8.9 MiB |  00m03s
 Copr repository                        100% |  49.2 KiB/s | 181.1 KiB |  00m04s
 fedora                                 100% |   1.1 MiB/s |  36.1 MiB |  00m32s
Repositories loaded.
Package                            Arch    Version                      Repository      Size
Installing group/module packages:
 bash                              aarch64 0:5.3.9-3.fc44               fedora       8.4 MiB
 bzip2                             aarch64 0:1.0.8-23.fc44              fedora     171.1 KiB
 coreutils                         aarch64 0:9.10-4.fc44                updates      8.2 MiB
 cpio                              aarch64 0:2.15-9.fc44                fedora       1.1 MiB
 diffutils                         aarch64 0:3.12-5.fc44                fedora       1.6 MiB
 fedora-release-common             noarch  0:44-18                      updates     20.6 KiB
 findutils                         aarch64 1:4.10.0-7.fc44              fedora       1.9 MiB
 gawk                              aarch64 0:5.3.2-3.fc44               fedora       2.6 MiB
 glibc-minimal-langpack            aarch64 0:2.43-6.fc44                updates      0.0   B
 grep                              aarch64 0:3.12-3.fc44                fedora       1.0 MiB
 gzip                              aarch64 0:1.14-2.fc44                fedora     437.5 KiB
 info                              aarch64 0:7.2-9.fc44                 fedora     421.5 KiB
 patch                             aarch64 0:2.8-4.fc44                 fedora     262.4 KiB
 redhat-rpm-config                 noarch  0:344-2.fc44                 updates    183.7 KiB
 rpm-build                         aarch64 0:6.0.1-2.fc44               fedora     598.3 KiB
 sed                               aarch64 0:4.9-7.fc44                 fedora     873.1 KiB
 shadow-utils                      aarch64 2:4.19.0-7.fc44              updates      4.4 MiB
 tar                               aarch64 2:1.35-8.fc44                fedora       3.0 MiB
 unzip                             aarch64 0:6.0-69.fc44                fedora     533.8 KiB
 util-linux                        aarch64 0:2.41.4-8.fc44              updates      6.8 MiB
 which                             aarch64 0:2.25-1.fc44                updates    123.6 KiB
 xz                                aarch64 1:5.8.2-2.fc44               fedora       1.4 MiB
Installing dependencies:
 R-srpm-macros                     noarch  0:1.3.7-2.fc44               updates      3.5 KiB
 add-determinism                   aarch64 0:0.7.3-2.fc44               updates      2.0 MiB
 alternatives                      aarch64 0:1.33-5.fc44                fedora      90.1 KiB
 ansible-srpm-macros               noarch  0:1-20.1.fc44                fedora      35.7 KiB
 audit-libs                        aarch64 0:4.1.4-1.fc44               fedora     486.7 KiB
 binutils                          aarch64 0:2.46-3.fc44                updates     30.5 MiB
 build-reproducibility-srpm-macros noarch  0:0.7.3-2.fc44               updates      1.2 KiB
 bzip2-libs                        aarch64 0:1.0.8-23.fc44              fedora      72.5 KiB
 ca-certificates                   noarch  0:2025.2.80_v9.0.304-7.fc44  updates      2.7 MiB
 cmake-srpm-macros                 noarch  0:4.3.0-1.fc44               fedora     524.0   B
 coreutils-common                  aarch64 0:9.10-4.fc44                updates     10.7 MiB
 crypto-policies                   noarch  0:20251128-3.git19878fe.fc44 fedora     132.6 KiB
 curl                              aarch64 0:8.18.0-6.fc44              updates    464.1 KiB
 cyrus-sasl-lib                    aarch64 0:2.1.28-35.fc44             fedora       2.4 MiB
 debugedit                         aarch64 0:5.3-2.fc44                 updates    320.9 KiB
 dwz                               aarch64 0:0.16-3.fc44                fedora     322.4 KiB
 ed                                aarch64 0:1.22.5-2.fc44              fedora     157.8 KiB
 efi-srpm-macros                   noarch  0:6-6.fc44                   fedora      40.2 KiB
 elfutils                          aarch64 0:0.195-1.fc44               updates      3.6 MiB
 elfutils-debuginfod-client        aarch64 0:0.195-1.fc44               updates    143.9 KiB
 elfutils-default-yama-scope       noarch  0:0.195-1.fc44               updates      1.8 KiB
 elfutils-libelf                   aarch64 0:0.195-1.fc44               updates      1.2 MiB
 elfutils-libs                     aarch64 0:0.195-1.fc44               updates    746.5 KiB
 erlang-srpm-macros                noarch  0:0.3.11-1.fc44              fedora       1.9 KiB
 fedora-gpg-keys                   noarch  0:44-1                       fedora     133.4 KiB
 fedora-release                    noarch  0:44-18                      updates      0.0   B
 fedora-release-identity-basic     noarch  0:44-18                      updates    629.0   B
 fedora-repos                      noarch  0:44-1                       fedora       4.9 KiB
 file                              aarch64 0:5.46-10.fc44               updates    140.1 KiB
 file-libs                         aarch64 0:5.46-10.fc44               updates     11.9 MiB
 filesystem                        aarch64 0:3.18-52.fc44               fedora     112.0   B
 filesystem-srpm-macros            noarch  0:3.18-52.fc44               fedora      38.2 KiB
 fonts-srpm-macros                 noarch  1:5.0.0-2.fc44               fedora      55.8 KiB
 forge-srpm-macros                 noarch  0:0.4.0-4.fc44               fedora      38.9 KiB
 fpc-srpm-macros                   noarch  0:1.3-16.fc44                fedora     144.0   B
 gap-srpm-macros                   noarch  0:2-2.fc44                   fedora       2.1 KiB
 gdb-minimal                       aarch64 0:17.1-6.fc44                updates     13.5 MiB
 gdbm-libs                         aarch64 1:1.23-11.fc44               fedora     233.7 KiB
 ghc-srpm-macros                   noarch  0:1.10-1.fc44                fedora     792.0   B
 glibc                             aarch64 0:2.43-6.fc44                updates      6.4 MiB
 glibc-common                      aarch64 0:2.43-6.fc44                updates      1.3 MiB
 glibc-gconv-extra                 aarch64 0:2.43-6.fc44                updates     18.5 MiB
 gmp                               aarch64 1:6.3.0-5.fc44               fedora     657.9 KiB
 gnat-srpm-macros                  noarch  0:7-2.fc44                   fedora       1.0 KiB
 gnome-srpm-macros                 noarch  0:1.0-1.fc44                 updates      3.5 KiB
 gnulib-l10n                       noarch  0:20241231-2.fc44            fedora     655.0 KiB
 gnupg2                            aarch64 0:2.4.9-16.fc44              updates      6.4 MiB
 gnupg2-dirmngr                    aarch64 0:2.4.9-16.fc44              updates    646.1 KiB
 gnupg2-gpg-agent                  aarch64 0:2.4.9-16.fc44              updates    846.9 KiB
 gnupg2-gpgconf                    aarch64 0:2.4.9-16.fc44              updates    321.8 KiB
 gnupg2-keyboxd                    aarch64 0:2.4.9-16.fc44              updates    233.3 KiB
 gnupg2-verify                     aarch64 0:2.4.9-16.fc44              updates    364.3 KiB
 gnutls                            aarch64 0:3.8.13-1.fc44              updates      3.7 MiB
 go-srpm-macros                    noarch  0:3.8.0-2.fc44               fedora      61.9 KiB
 gpgverify                         noarch  0:2.2-4.fc44                 fedora       8.7 KiB
 ima-evm-utils-libs                aarch64 0:1.6.2-8.fc44               fedora      92.6 KiB
 jansson                           aarch64 0:2.14-4.fc44                fedora      93.0 KiB
 java-srpm-macros                  noarch  0:1-8.fc44                   fedora     870.0   B
 json-c                            aarch64 0:0.18-8.fc44                fedora     138.5 KiB
 kernel-srpm-macros                noarch  0:1.0-28.fc44                fedora       1.9 KiB
 keyutils-libs                     aarch64 0:1.6.3-7.fc44               fedora      98.2 KiB
 krb5-libs                         aarch64 0:1.22.2-4.fc44              updates      2.5 MiB
 libacl                            aarch64 0:2.3.2-6.fc44               fedora      67.8 KiB
 libarchive                        aarch64 0:3.8.7-1.fc44               updates    975.5 KiB
 libassuan                         aarch64 0:2.5.7-5.fc44               fedora     215.8 KiB
 libattr                           aarch64 0:2.5.2-8.fc44               fedora      68.3 KiB
 libblkid                          aarch64 0:2.41.4-8.fc44              updates    290.4 KiB
 libbrotli                         aarch64 0:1.2.0-3.fc44               fedora     909.1 KiB
 libcap                            aarch64 0:2.78-1.fc44                updates    508.4 KiB
 libcap-ng                         aarch64 0:0.9.3-1.fc44               updates    160.9 KiB
 libcbor                           aarch64 0:0.13.0-2.fc44              fedora     139.5 KiB
 libcom_err                        aarch64 0:1.47.3-4.fc44              fedora     111.0 KiB
 libcurl                           aarch64 0:8.18.0-6.fc44              updates    980.9 KiB
 libeconf                          aarch64 0:0.7.9-3.fc44               fedora      80.8 KiB
 libevent                          aarch64 0:2.1.12-17.fc44             fedora       1.1 MiB
 libfdisk                          aarch64 0:2.41.4-8.fc44              updates    418.8 KiB
 libffi                            aarch64 0:3.5.2-2.fc44               fedora     155.7 KiB
 libfido2                          aarch64 0:1.16.0-5.fc44              fedora     278.6 KiB
 libfsverity                       aarch64 0:1.6-4.fc44                 fedora      68.4 KiB
 libgcc                            aarch64 0:16.1.1-2.fc44              updates    222.3 KiB
 libgcrypt                         aarch64 0:1.12.2-1.fc44              updates      1.2 MiB
 libgomp                           aarch64 0:16.1.1-2.fc44              updates    592.8 KiB
 libgpg-error                      aarch64 0:1.58-2.fc44                fedora     989.6 KiB
 libidn2                           aarch64 0:2.3.8-3.fc44               fedora     560.4 KiB
 libksba                           aarch64 0:1.6.7-5.fc44               fedora     398.3 KiB
 liblastlog2                       aarch64 0:2.41.4-8.fc44              updates    137.8 KiB
 libmount                          aarch64 0:2.41.4-8.fc44              updates    420.1 KiB
 libnghttp2                        aarch64 0:1.68.0-4.fc44              updates    197.9 KiB
 libnghttp3                        aarch64 0:1.16.0-1.fc44              updates    206.6 KiB
 libpkgconf                        aarch64 0:2.5.1-1.fc44               fedora     134.1 KiB
 libpsl                            aarch64 0:0.21.5-7.fc44              fedora     132.3 KiB
 libselinux                        aarch64 0:3.10-1.fc44                fedora     201.0 KiB
 libselinux-utils                  aarch64 0:3.10-1.fc44                fedora       1.3 MiB
 libsemanage                       aarch64 0:3.10-1.fc44                fedora     360.0 KiB
 libsepol                          aarch64 0:3.10-1.fc44                fedora     810.0 KiB
 libsmartcols                      aarch64 0:2.41.4-8.fc44              updates    224.4 KiB
 libssh                            aarch64 0:0.12.0-1.fc44              fedora     718.9 KiB
 libssh-config                     noarch  0:0.12.0-1.fc44              fedora     277.0   B
 libstdc++                         aarch64 0:16.1.1-2.fc44              updates      3.0 MiB
 libtasn1                          aarch64 0:4.21.0-1.fc44              fedora     220.7 KiB
 libtool-ltdl                      aarch64 0:2.5.4-10.fc44              fedora      93.9 KiB
 libunistring                      aarch64 0:1.1-11.fc44                fedora       1.7 MiB
 libusb1                           aarch64 0:1.0.30-1.fc44              updates    179.7 KiB
 libuuid                           aarch64 0:2.41.4-8.fc44              updates     69.3 KiB
 libverto                          aarch64 0:0.3.2-12.fc44              fedora      69.3 KiB
 libxcrypt                         aarch64 0:4.5.2-3.fc44               fedora     273.2 KiB
 libxml2                           aarch64 0:2.12.10-6.fc44             fedora       1.9 MiB
 libzstd                           aarch64 0:1.5.7-5.fc44               fedora     860.2 KiB
 linkdupes                         aarch64 0:0.7.3-2.fc44               updates    713.7 KiB
 lua-libs                          aarch64 0:5.4.8-5.fc44               fedora     329.8 KiB
 lua-srpm-macros                   noarch  0:1-17.fc44                  fedora       1.3 KiB
 lz4-libs                          aarch64 0:1.10.0-4.fc44              fedora     197.3 KiB
 mpfr                              aarch64 0:4.2.2-3.fc44               fedora     755.4 KiB
 ncurses-base                      noarch  0:6.6-1.fc44                 fedora     329.7 KiB
 ncurses-libs                      aarch64 0:6.6-1.fc44                 fedora       1.2 MiB
 nettle                            aarch64 0:3.10.1-3.fc44              fedora     765.0 KiB
 ngtcp2                            aarch64 0:1.22.1-1.fc44              updates    341.1 KiB
 ngtcp2-crypto-ossl                aarch64 0:1.22.1-1.fc44              updates     67.5 KiB
 npth                              aarch64 0:1.8-4.fc44                 fedora      93.3 KiB
 ocaml-srpm-macros                 noarch  0:11-3.fc44                  fedora       1.9 KiB
 openblas-srpm-macros              noarch  0:2-21.fc44                  fedora     112.0   B
 openldap                          aarch64 0:2.6.13-1.fc44              fedora     764.2 KiB
 openssl-libs                      aarch64 1:3.5.7-1.fc44               updates      7.4 MiB
 p11-kit                           aarch64 0:0.26.2-1.fc44              fedora       2.7 MiB
 p11-kit-trust                     aarch64 0:0.26.2-1.fc44              fedora     530.1 KiB
 package-notes-srpm-macros         noarch  0:0.19-1.fc44                updates      1.6 KiB
 pam-libs                          aarch64 0:1.7.2-1.fc44               fedora     222.6 KiB
 pcre2                             aarch64 0:10.47-1.fc44.1             fedora     714.3 KiB
 pcre2-syntax                      noarch  0:10.47-1.fc44.1             fedora     281.9 KiB
 perl-srpm-macros                  noarch  0:1-61.fc44                  fedora     861.0   B
 pkgconf                           aarch64 0:2.5.1-1.fc44               fedora     116.8 KiB
 pkgconf-m4                        noarch  0:2.5.1-1.fc44               fedora      14.3 KiB
 pkgconf-pkg-config                aarch64 0:2.5.1-1.fc44               fedora     990.0   B
 policycoreutils                   aarch64 0:3.10-4.fc44                updates      1.5 MiB
 popt                              aarch64 0:1.19-10.fc44               fedora     144.6 KiB
 publicsuffix-list-dafsa           noarch  0:20260116-1.fc44            fedora      70.4 KiB
 pyproject-srpm-macros             noarch  0:1.22.2-1.fc44              updates      3.2 KiB
 python-srpm-macros                noarch  0:3.14-12.fc44               fedora      51.6 KiB
 qt5-srpm-macros                   noarch  0:5.15.18-2.fc44             fedora     500.0   B
 qt6-srpm-macros                   noarch  0:6.11.1-1.fc44              updates    472.0   B
 readline                          aarch64 0:8.3-4.fc44                 fedora     563.5 KiB
 rpm                               aarch64 0:6.0.1-2.fc44               fedora       3.3 MiB
 rpm-build-libs                    aarch64 0:6.0.1-2.fc44               fedora     264.0 KiB
 rpm-libs                          aarch64 0:6.0.1-2.fc44               fedora     995.0 KiB
 rpm-plugin-selinux                aarch64 0:6.0.1-2.fc44               fedora      67.9 KiB
 rpm-sequoia                       aarch64 0:1.10.2-2.fc44              updates      2.2 MiB
 rpm-sign-libs                     aarch64 0:6.0.1-2.fc44               fedora      67.6 KiB
 rust-srpm-macros                  noarch  0:28.4-3.fc44                fedora       5.5 KiB
 selinux-policy                    noarch  0:44.3-1.fc44                updates     32.1 KiB
 selinux-policy-targeted           noarch  0:44.3-1.fc44                updates     18.6 MiB
 setup                             noarch  0:2.15.0-28.fc44             fedora     724.9 KiB
 sqlite-libs                       aarch64 0:3.51.2-1.fc44              fedora       1.6 MiB
 systemd-libs                      aarch64 0:259.6-1.fc44               updates      2.5 MiB
 systemd-standalone-sysusers       aarch64 0:259.6-1.fc44               updates    329.6 KiB
 tpm2-tss                          aarch64 0:4.1.3-9.fc44               fedora       2.1 MiB
 tree-sitter-srpm-macros           noarch  0:0.4.2-2.fc44               fedora       8.3 KiB
 util-linux-core                   aarch64 0:2.41.4-8.fc44              updates      2.4 MiB
 xxhash-libs                       aarch64 0:0.8.3-4.fc44               fedora      85.8 KiB
 xz-libs                           aarch64 1:5.8.2-2.fc44               fedora     265.4 KiB
 zig-srpm-macros                   noarch  0:1-8.fc44                   fedora       1.3 KiB
 zip                               aarch64 0:3.0-45.fc44                fedora     762.0 KiB
 zlib-ng-compat                    aarch64 0:2.3.3-3.fc44               fedora     133.4 KiB
 zstd                              aarch64 0:1.5.7-5.fc44               fedora     562.2 KiB
Installing groups:
 Buildsystem building group                                                                 

Transaction Summary:
 Installing:       185 packages

Total size of inbound packages is 66 MiB. Need to download 66 MiB.
After this operation, 249 MiB extra will be used (install 249 MiB, remove 0 B).
[  1/185] bzip2-0:1.0.8-23.fc44.aarch64 100% |  76.9 KiB/s |  51.9 KiB |  00m01s
[  2/185] cpio-0:2.15-9.fc44.aarch64    100% | 326.6 KiB/s | 289.7 KiB |  00m01s
[  3/185] diffutils-0:3.12-5.fc44.aarch 100% | 728.5 KiB/s | 391.9 KiB |  00m01s
[  4/185] findutils-1:4.10.0-7.fc44.aar 100% | 911.0 KiB/s | 552.0 KiB |  00m01s
[  5/185] grep-0:3.12-3.fc44.aarch64    100% | 881.8 KiB/s | 296.3 KiB |  00m00s
[  6/185] gzip-0:1.14-2.fc44.aarch64    100% | 640.0 KiB/s | 172.8 KiB |  00m00s
[  7/185] bash-0:5.3.9-3.fc44.aarch64   100% | 796.0 KiB/s |   1.8 MiB |  00m02s
[  8/185] info-0:7.2-9.fc44.aarch64     100% | 665.6 KiB/s | 179.0 KiB |  00m00s
[  9/185] gawk-0:5.3.2-3.fc44.aarch64   100% | 943.7 KiB/s |   1.1 MiB |  00m01s
[ 10/185] rpm-build-0:6.0.1-2.fc44.aarc 100% | 670.3 KiB/s | 132.0 KiB |  00m00s
[ 11/185] patch-0:2.8-4.fc44.aarch64    100% | 550.0 KiB/s | 111.1 KiB |  00m00s
[ 12/185] sed-0:4.9-7.fc44.aarch64      100% | 934.2 KiB/s | 314.8 KiB |  00m00s
[ 13/185] unzip-0:6.0-69.fc44.aarch64   100% | 766.8 KiB/s | 200.9 KiB |  00m00s
[ 14/185] coreutils-0:9.10-4.fc44.aarch 100% |  17.6 MiB/s |   1.1 MiB |  00m00s
[ 15/185] fedora-release-common-0:44-18 100% |   3.3 MiB/s |  23.6 KiB |  00m00s
[ 16/185] glibc-minimal-langpack-0:2.43 100% |   9.9 MiB/s |  81.5 KiB |  00m00s
[ 17/185] redhat-rpm-config-0:344-2.fc4 100% |   9.5 MiB/s |  78.1 KiB |  00m00s
[ 18/185] shadow-utils-2:4.19.0-7.fc44. 100% |  86.0 MiB/s |   1.3 MiB |  00m00s
[ 19/185] util-linux-0:2.41.4-8.fc44.aa 100% |  91.3 MiB/s |   1.2 MiB |  00m00s
[ 20/185] which-0:2.25-1.fc44.aarch64   100% |   5.1 MiB/s |  41.6 KiB |  00m00s
[ 21/185] xz-1:5.8.2-2.fc44.aarch64     100% |   1.1 MiB/s | 606.6 KiB |  00m01s
[ 22/185] tar-2:1.35-8.fc44.aarch64     100% | 907.5 KiB/s | 854.9 KiB |  00m01s
[ 23/185] ncurses-libs-0:6.6-1.fc44.aar 100% | 966.6 KiB/s | 324.8 KiB |  00m00s
[ 24/185] bzip2-libs-0:1.0.8-23.fc44.aa 100% | 305.4 KiB/s |  41.2 KiB |  00m00s
[ 25/185] libselinux-0:3.10-1.fc44.aarc 100% | 483.3 KiB/s |  97.6 KiB |  00m00s
[ 26/185] gmp-1:6.3.0-5.fc44.aarch64    100% | 809.1 KiB/s | 271.0 KiB |  00m00s
[ 27/185] mpfr-0:4.2.2-3.fc44.aarch64   100% | 790.0 KiB/s | 320.0 KiB |  00m00s
[ 28/185] readline-0:8.3-4.fc44.aarch64 100% | 819.0 KiB/s | 221.1 KiB |  00m00s
[ 29/185] filesystem-0:3.18-52.fc44.aar 100% | 994.9 KiB/s |   1.3 MiB |  00m01s
[ 30/185] ed-0:1.22.5-2.fc44.aarch64    100% | 417.6 KiB/s |  83.5 KiB |  00m00s
[ 31/185] libattr-0:2.5.2-8.fc44.aarch6 100% | 134.0 KiB/s |  17.8 KiB |  00m00s
[ 32/185] pcre2-0:10.47-1.fc44.1.aarch6 100% | 742.6 KiB/s | 250.2 KiB |  00m00s
[ 33/185] pkgconf-pkg-config-0:2.5.1-1. 100% |  71.0 KiB/s |   9.4 KiB |  00m00s
[ 34/185] popt-0:1.19-10.fc44.aarch64   100% | 490.5 KiB/s |  65.2 KiB |  00m00s
[ 35/185] rpm-build-libs-0:6.0.1-2.fc44 100% | 598.5 KiB/s | 117.3 KiB |  00m00s
[ 36/185] rpm-libs-0:6.0.1-2.fc44.aarch 100% | 936.2 KiB/s | 378.2 KiB |  00m00s
[ 37/185] zstd-0:1.5.7-5.fc44.aarch64   100% | 696.2 KiB/s | 183.1 KiB |  00m00s
[ 38/185] libacl-0:2.3.2-6.fc44.aarch64 100% | 182.2 KiB/s |  24.0 KiB |  00m00s
[ 39/185] coreutils-common-0:9.10-4.fc4 100% | 133.3 MiB/s |   2.1 MiB |  00m00s
[ 40/185] xz-libs-1:5.8.2-2.fc44.aarch6 100% | 555.5 KiB/s | 111.7 KiB |  00m00s
[ 41/185] rpm-0:6.0.1-2.fc44.aarch64    100% | 858.6 KiB/s | 577.8 KiB |  00m01s
[ 42/185] fedora-repos-0:44-1.noarch    100% |  70.0 KiB/s |   9.2 KiB |  00m00s
[ 43/185] gnome-srpm-macros-0:1.0-1.fc4 100% | 541.1 KiB/s |   8.7 KiB |  00m00s
[ 44/185] glibc-0:2.43-6.fc44.aarch64   100% |  31.9 MiB/s |   1.9 MiB |  00m00s
[ 45/185] glibc-common-0:2.43-6.fc44.aa 100% |   6.6 MiB/s | 356.4 KiB |  00m00s
[ 46/185] ansible-srpm-macros-0:1-20.1. 100% | 150.0 KiB/s |  20.1 KiB |  00m00s
[ 47/185] cmake-srpm-macros-0:4.3.0-1.f 100% |  79.7 KiB/s |  10.4 KiB |  00m00s
[ 48/185] dwz-0:0.16-3.fc44.aarch64     100% | 650.2 KiB/s | 131.3 KiB |  00m00s
[ 49/185] erlang-srpm-macros-0:0.3.11-1 100% |  76.0 KiB/s |  10.0 KiB |  00m00s
[ 50/185] efi-srpm-macros-0:6-6.fc44.no 100% | 168.3 KiB/s |  22.6 KiB |  00m00s
[ 51/185] filesystem-srpm-macros-0:3.18 100% | 198.7 KiB/s |  26.6 KiB |  00m00s
[ 52/185] fonts-srpm-macros-1:5.0.0-2.f 100% | 209.0 KiB/s |  27.4 KiB |  00m00s
[ 53/185] forge-srpm-macros-0:0.4.0-4.f 100% | 148.0 KiB/s |  20.0 KiB |  00m00s
[ 54/185] fpc-srpm-macros-0:1.3-16.fc44 100% |  58.8 KiB/s |   7.9 KiB |  00m00s
[ 55/185] gap-srpm-macros-0:2-2.fc44.no 100% |  69.8 KiB/s |   9.1 KiB |  00m00s
[ 56/185] ghc-srpm-macros-0:1.10-1.fc44 100% |  64.6 KiB/s |   8.8 KiB |  00m00s
[ 57/185] gnat-srpm-macros-0:7-2.fc44.n 100% |  65.2 KiB/s |   8.7 KiB |  00m00s
[ 58/185] go-srpm-macros-0:3.8.0-2.fc44 100% | 215.4 KiB/s |  28.2 KiB |  00m00s
[ 59/185] java-srpm-macros-0:1-8.fc44.n 100% |  60.1 KiB/s |   8.1 KiB |  00m00s
[ 60/185] kernel-srpm-macros-0:1.0-28.f 100% |  67.5 KiB/s |   9.0 KiB |  00m00s
[ 61/185] lua-srpm-macros-0:1-17.fc44.n 100% |  67.8 KiB/s |   8.9 KiB |  00m00s
[ 62/185] ocaml-srpm-macros-0:11-3.fc44 100% |  68.7 KiB/s |   9.3 KiB |  00m00s
[ 63/185] openblas-srpm-macros-0:2-21.f 100% |  57.8 KiB/s |   7.8 KiB |  00m00s
[ 64/185] perl-srpm-macros-0:1-61.fc44. 100% |  64.3 KiB/s |   8.4 KiB |  00m00s
[ 65/185] python-srpm-macros-0:3.14-12. 100% | 178.1 KiB/s |  24.0 KiB |  00m00s
[ 66/185] qt5-srpm-macros-0:5.15.18-2.f 100% |  64.8 KiB/s |   8.7 KiB |  00m00s
[ 67/185] rust-srpm-macros-0:28.4-3.fc4 100% |  84.4 KiB/s |  11.1 KiB |  00m00s
[ 68/185] tree-sitter-srpm-macros-0:0.4 100% |  99.8 KiB/s |  13.5 KiB |  00m00s
[ 69/185] zig-srpm-macros-0:1-8.fc44.no 100% |  65.8 KiB/s |   8.8 KiB |  00m00s
[ 70/185] zip-0:3.0-45.fc44.aarch64     100% |   1.3 MiB/s | 265.6 KiB |  00m00s
[ 71/185] audit-libs-0:4.1.4-1.fc44.aar 100% | 690.7 KiB/s | 140.2 KiB |  00m00s
[ 72/185] libeconf-0:0.7.9-3.fc44.aarch 100% | 261.3 KiB/s |  35.0 KiB |  00m00s
[ 73/185] libxcrypt-0:4.5.2-3.fc44.aarc 100% | 948.0 KiB/s | 125.1 KiB |  00m00s
[ 74/185] pam-libs-0:1.7.2-1.fc44.aarch 100% | 420.8 KiB/s |  56.8 KiB |  00m00s
[ 75/185] libblkid-0:2.41.4-8.fc44.aarc 100% |   9.9 MiB/s | 122.2 KiB |  00m00s
[ 76/185] libfdisk-0:2.41.4-8.fc44.aarc 100% |  16.8 MiB/s | 154.9 KiB |  00m00s
[ 77/185] libsemanage-0:3.10-1.fc44.aar 100% | 589.5 KiB/s | 119.1 KiB |  00m00s
[ 78/185] liblastlog2-0:2.41.4-8.fc44.a 100% |   3.0 MiB/s |  24.2 KiB |  00m00s
[ 79/185] libsmartcols-0:2.41.4-8.fc44. 100% |   9.0 MiB/s |  82.9 KiB |  00m00s
[ 80/185] libmount-0:2.41.4-8.fc44.aarc 100% |   9.7 MiB/s | 158.3 KiB |  00m00s
[ 81/185] libuuid-0:2.41.4-8.fc44.aarch 100% |   2.8 MiB/s |  26.2 KiB |  00m00s
[ 82/185] util-linux-core-0:2.41.4-8.fc 100% |  25.2 MiB/s | 542.7 KiB |  00m00s
[ 83/185] zlib-ng-compat-0:2.3.3-3.fc44 100% | 553.0 KiB/s |  72.4 KiB |  00m00s
[ 84/185] setup-0:2.15.0-28.fc44.noarch 100% | 582.1 KiB/s | 157.2 KiB |  00m00s
[ 85/185] ncurses-base-0:6.6-1.fc44.noa 100% | 437.8 KiB/s |  88.0 KiB |  00m00s
[ 86/185] libsepol-0:3.10-1.fc44.aarch6 100% |   2.4 MiB/s | 327.1 KiB |  00m00s
[ 87/185] pkgconf-0:2.5.1-1.fc44.aarch6 100% | 368.1 KiB/s |  48.2 KiB |  00m00s
[ 88/185] pkgconf-m4-0:2.5.1-1.fc44.noa 100% | 101.9 KiB/s |  13.8 KiB |  00m00s
[ 89/185] pcre2-syntax-0:10.47-1.fc44.1 100% | 612.3 KiB/s | 164.7 KiB |  00m00s
[ 90/185] lua-libs-0:5.4.8-5.fc44.aarch 100% | 980.6 KiB/s | 129.4 KiB |  00m00s
[ 91/185] rpm-sign-libs-0:6.0.1-2.fc44. 100% | 203.9 KiB/s |  27.1 KiB |  00m00s
[ 92/185] sqlite-libs-0:3.51.2-1.fc44.a 100% |   3.7 MiB/s | 750.9 KiB |  00m00s
[ 93/185] gnulib-l10n-0:20241231-2.fc44 100% | 558.8 KiB/s | 150.3 KiB |  00m00s
[ 94/185] fedora-gpg-keys-0:44-1.noarch 100% |   1.0 MiB/s | 141.4 KiB |  00m00s
[ 95/185] libzstd-0:1.5.7-5.fc44.aarch6 100% | 815.0 KiB/s | 329.2 KiB |  00m00s
[ 96/185] libpkgconf-0:2.5.1-1.fc44.aar 100% | 308.1 KiB/s |  40.7 KiB |  00m00s
[ 97/185] ima-evm-utils-libs-0:1.6.2-8. 100% | 219.9 KiB/s |  29.5 KiB |  00m00s
[ 98/185] libfsverity-0:1.6-4.fc44.aarc 100% | 143.1 KiB/s |  18.7 KiB |  00m00s
[ 99/185] json-c-0:0.18-8.fc44.aarch64  100% | 342.8 KiB/s |  44.9 KiB |  00m00s
[100/185] glibc-gconv-extra-0:2.43-6.fc 100% |   4.1 MiB/s |   1.7 MiB |  00m00s
[101/185] libstdc++-0:16.1.1-2.fc44.aar 100% |  81.0 MiB/s | 912.2 KiB |  00m00s
[102/185] libusb1-0:1.0.30-1.fc44.aarch 100% |   9.6 MiB/s |  79.0 KiB |  00m00s
[103/185] openssl-libs-1:3.5.7-1.fc44.a 100% | 137.1 MiB/s |   2.5 MiB |  00m00s
[104/185] crypto-policies-0:20251128-3. 100% | 739.1 KiB/s |  98.3 KiB |  00m00s
[105/185] gnupg2-0:2.4.9-16.fc44.aarch6 100% |  67.1 MiB/s |   1.6 MiB |  00m00s
[106/185] libgcc-0:16.1.1-2.fc44.aarch6 100% | 477.4 KiB/s | 112.7 KiB |  00m00s
[107/185] gnupg2-dirmngr-0:2.4.9-16.fc4 100% |  19.7 MiB/s | 262.9 KiB |  00m00s
[108/185] gnupg2-gpg-agent-0:2.4.9-16.f 100% |  20.0 MiB/s | 265.8 KiB |  00m00s
[109/185] gnupg2-gpgconf-0:2.4.9-16.fc4 100% |  13.9 MiB/s | 113.5 KiB |  00m00s
[110/185] gnupg2-keyboxd-0:2.4.9-16.fc4 100% |  12.6 MiB/s |  90.6 KiB |  00m00s
[111/185] tpm2-tss-0:4.1.3-9.fc44.aarch 100% | 850.0 KiB/s | 401.2 KiB |  00m00s
[112/185] gnupg2-verify-0:2.4.9-16.fc44 100% |  13.2 MiB/s | 162.8 KiB |  00m00s
[113/185] gpgverify-0:2.2-4.fc44.noarch 100% |  85.1 KiB/s |  11.2 KiB |  00m00s
[114/185] libassuan-0:2.5.7-5.fc44.aarc 100% | 495.3 KiB/s |  66.9 KiB |  00m00s
[115/185] libgpg-error-0:1.58-2.fc44.aa 100% |   1.8 MiB/s | 248.3 KiB |  00m00s
[116/185] npth-0:1.8-4.fc44.aarch64     100% | 185.5 KiB/s |  25.0 KiB |  00m00s
[117/185] openldap-0:2.6.13-1.fc44.aarc 100% |   1.9 MiB/s | 252.2 KiB |  00m00s
[118/185] libksba-0:1.6.7-5.fc44.aarch6 100% | 586.6 KiB/s | 157.8 KiB |  00m00s
[119/185] libevent-0:2.1.12-17.fc44.aar 100% |   2.0 MiB/s | 270.5 KiB |  00m00s
[120/185] libtool-ltdl-0:2.5.4-10.fc44. 100% | 265.7 KiB/s |  35.6 KiB |  00m00s
[121/185] gdbm-libs-1:1.23-11.fc44.aarc 100% | 430.1 KiB/s |  56.3 KiB |  00m00s
[122/185] libcap-0:2.78-1.fc44.aarch64  100% |   2.5 MiB/s |  87.8 KiB |  00m00s
[123/185] elfutils-libelf-0:0.195-1.fc4 100% |  25.3 MiB/s | 207.1 KiB |  00m00s
[124/185] elfutils-libs-0:0.195-1.fc44. 100% |   4.4 MiB/s | 263.8 KiB |  00m00s
[125/185] elfutils-0:0.195-1.fc44.aarch 100% |  61.8 MiB/s | 569.1 KiB |  00m00s
[126/185] elfutils-debuginfod-client-0: 100% |   6.3 MiB/s |  45.5 KiB |  00m00s
[127/185] file-libs-0:5.46-10.fc44.aarc 100% |  82.8 MiB/s | 848.0 KiB |  00m00s
[128/185] file-0:5.46-10.fc44.aarch64   100% |   6.8 MiB/s |  48.8 KiB |  00m00s
[129/185] libgomp-0:16.1.1-2.fc44.aarch 100% |  40.7 MiB/s | 375.2 KiB |  00m00s
[130/185] binutils-0:2.46-3.fc44.aarch6 100% | 167.2 MiB/s |   6.4 MiB |  00m00s
[131/185] rpm-sequoia-0:1.10.2-2.fc44.a 100% |   3.6 MiB/s | 856.2 KiB |  00m00s
[132/185] alternatives-0:1.33-5.fc44.aa 100% | 299.2 KiB/s |  40.4 KiB |  00m00s
[133/185] debugedit-0:5.3-2.fc44.aarch6 100% |  10.6 MiB/s |  86.7 KiB |  00m00s
[134/185] libarchive-0:3.8.7-1.fc44.aar 100% |  45.1 MiB/s | 416.0 KiB |  00m00s
[135/185] jansson-0:2.14-4.fc44.aarch64 100% | 355.0 KiB/s |  46.5 KiB |  00m00s
[136/185] lz4-libs-0:1.10.0-4.fc44.aarc 100% | 585.0 KiB/s |  76.6 KiB |  00m00s
[137/185] curl-0:8.18.0-6.fc44.aarch64  100% |  25.5 MiB/s | 234.7 KiB |  00m00s
[138/185] libcap-ng-0:0.9.3-1.fc44.aarc 100% |   4.8 MiB/s |  34.6 KiB |  00m00s
[139/185] cyrus-sasl-lib-0:2.1.28-35.fc 100% | 882.3 KiB/s | 772.9 KiB |  00m01s
[140/185] systemd-libs-0:259.6-1.fc44.a 100% |  59.7 MiB/s | 794.8 KiB |  00m00s
[141/185] build-reproducibility-srpm-ma 100% |   2.2 MiB/s |  13.3 KiB |  00m00s
[142/185] add-determinism-0:0.7.3-2.fc4 100% |  71.1 MiB/s | 800.6 KiB |  00m00s
[143/185] linkdupes-0:0.7.3-2.fc44.aarc 100% |  24.6 MiB/s | 328.1 KiB |  00m00s
[144/185] R-srpm-macros-0:1.3.7-2.fc44. 100% | 296.3 KiB/s |  11.0 KiB |  00m00s
[145/185] package-notes-srpm-macros-0:0 100% |   1.7 MiB/s |  10.2 KiB |  00m00s
[146/185] qt6-srpm-macros-0:6.11.1-1.fc 100% |   1.3 MiB/s |   9.2 KiB |  00m00s
[147/185] ca-certificates-0:2025.2.80_v 100% |  86.5 MiB/s | 974.8 KiB |  00m00s
[148/185] pyproject-srpm-macros-0:1.22. 100% | 407.7 KiB/s |  15.5 KiB |  00m00s
[149/185] libffi-0:3.5.2-2.fc44.aarch64 100% | 297.4 KiB/s |  39.6 KiB |  00m00s
[150/185] p11-kit-trust-0:0.26.2-1.fc44 100% |   1.0 MiB/s | 140.0 KiB |  00m00s
[151/185] libtasn1-0:4.21.0-1.fc44.aarc 100% | 555.9 KiB/s |  73.4 KiB |  00m00s
[152/185] libgcrypt-0:1.12.2-1.fc44.aar 100% |  47.6 MiB/s | 535.9 KiB |  00m00s
[153/185] gnutls-0:3.8.13-1.fc44.aarch6 100% | 108.4 MiB/s |   1.3 MiB |  00m00s
[154/185] libxml2-0:2.12.10-6.fc44.aarc 100% | 920.3 KiB/s | 682.0 KiB |  00m01s
[155/185] p11-kit-0:0.26.2-1.fc44.aarch 100% | 984.0 KiB/s | 528.4 KiB |  00m01s
[156/185] libidn2-0:2.3.8-3.fc44.aarch6 100% |   1.3 MiB/s | 174.6 KiB |  00m00s
[157/185] elfutils-default-yama-scope-0 100% |   1.4 MiB/s |  11.2 KiB |  00m00s
[158/185] fedora-release-0:44-18.noarch 100% |   2.0 MiB/s |  12.5 KiB |  00m00s
[159/185] systemd-standalone-sysusers-0 100% |  17.2 MiB/s | 141.3 KiB |  00m00s
[160/185] gdb-minimal-0:17.1-6.fc44.aar 100% |  42.5 MiB/s |   4.3 MiB |  00m00s
[161/185] nettle-0:3.10.1-3.fc44.aarch6 100% |   3.1 MiB/s | 425.5 KiB |  00m00s
[162/185] fedora-release-identity-basic 100% |   1.8 MiB/s |  13.2 KiB |  00m00s
[163/185] libcurl-0:8.18.0-6.fc44.aarch 100% |  41.4 MiB/s | 423.5 KiB |  00m00s
[164/185] xxhash-libs-0:0.8.3-4.fc44.aa 100% | 259.0 KiB/s |  34.5 KiB |  00m00s
[165/185] libpsl-0:0.21.5-7.fc44.aarch6 100% | 492.0 KiB/s |  64.9 KiB |  00m00s
[166/185] libssh-0:0.12.0-1.fc44.aarch6 100% |   2.0 MiB/s | 274.8 KiB |  00m00s
[167/185] libunistring-0:1.1-11.fc44.aa 100% | 889.8 KiB/s | 538.3 KiB |  00m01s
[168/185] libbrotli-0:1.2.0-3.fc44.aarc 100% | 865.2 KiB/s | 348.7 KiB |  00m00s
[169/185] publicsuffix-list-dafsa-0:202 100% | 443.2 KiB/s |  60.3 KiB |  00m00s
[170/185] libfido2-0:1.16.0-5.fc44.aarc 100% | 734.5 KiB/s |  96.2 KiB |  00m00s
[171/185] libssh-config-0:0.12.0-1.fc44 100% |  69.8 KiB/s |   9.4 KiB |  00m00s
[172/185] selinux-policy-0:44.3-1.fc44. 100% |   2.1 MiB/s |  23.2 KiB |  00m00s
[173/185] selinux-policy-targeted-0:44. 100% | 205.3 MiB/s |   6.8 MiB |  00m00s
[174/185] krb5-libs-0:1.22.2-4.fc44.aar 100% |  62.0 MiB/s | 761.3 KiB |  00m00s
[175/185] libcbor-0:0.13.0-2.fc44.aarch 100% | 256.9 KiB/s |  34.4 KiB |  00m00s
[176/185] rpm-plugin-selinux-0:6.0.1-2. 100% | 146.8 KiB/s |  19.2 KiB |  00m00s
[177/185] keyutils-libs-0:1.6.3-7.fc44. 100% | 233.1 KiB/s |  31.5 KiB |  00m00s
[178/185] policycoreutils-0:3.10-4.fc44 100% |   7.1 MiB/s | 260.2 KiB |  00m00s
[179/185] libcom_err-0:1.47.3-4.fc44.aa 100% | 201.2 KiB/s |  27.0 KiB |  00m00s
[180/185] libnghttp2-0:1.68.0-4.fc44.aa 100% |   9.0 MiB/s |  74.0 KiB |  00m00s
[181/185] libnghttp3-0:1.16.0-1.fc44.aa 100% |   9.6 MiB/s |  69.1 KiB |  00m00s
[182/185] ngtcp2-0:1.22.1-1.fc44.aarch6 100% |  18.0 MiB/s | 147.2 KiB |  00m00s
[183/185] libverto-0:0.3.2-12.fc44.aarc 100% | 156.6 KiB/s |  20.5 KiB |  00m00s
[184/185] ngtcp2-crypto-ossl-0:1.22.1-1 100% |   3.6 MiB/s |  26.0 KiB |  00m00s
[185/185] libselinux-utils-0:3.10-1.fc4 100% | 605.2 KiB/s | 122.3 KiB |  00m00s
--------------------------------------------------------------------------------
[185/185] Total                         100% |   6.0 MiB/s |  66.3 MiB |  00m11s
Running transaction
Importing OpenPGP key 0x6D9F90A6:
 UserID     : "Fedora (44) <fedora-44-primary@fedoraproject.org>"
 Fingerprint: 36F612DCF27F7D1A48A835E4DBFCF71C6D9F90A6
 From       : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-44-primary
The key was successfully imported.
[  1/187] Verify package files          100% | 764.0   B/s | 185.0   B |  00m00s
[  2/187] Prepare transaction           100% |   2.4 KiB/s | 185.0   B |  00m00s
[  3/187] Installing libgcc-0:16.1.1-2. 100% | 218.7 MiB/s | 224.0 KiB |  00m00s
[  4/187] Installing libssh-config-0:0. 100% |   0.0   B/s | 816.0   B |  00m00s
[  5/187] Installing publicsuffix-list- 100% |  69.4 MiB/s |  71.1 KiB |  00m00s
[  6/187] Installing fedora-release-ide 100% | 867.2 KiB/s | 888.0   B |  00m00s
[  7/187] Installing fedora-gpg-keys-0: 100% |  29.6 MiB/s | 182.1 KiB |  00m00s
[  8/187] Installing fedora-repos-0:44- 100% |   0.0   B/s |   5.7 KiB |  00m00s
[  9/187] Installing fedora-release-com 100% |  24.3 MiB/s |  24.9 KiB |  00m00s
[ 10/187] Installing fedora-release-0:4 100% |  17.3 KiB/s | 124.0   B |  00m00s
>>> Running sysusers scriptlet: setup-0:2.15.0-28.fc44.noarch
>>> Finished sysusers scriptlet: setup-0:2.15.0-28.fc44.noarch
>>> Scriptlet output:
>>> Creating group 'adm' with GID 4.
>>> Creating group 'audio' with GID 63.
>>> Creating group 'cdrom' with GID 11.
>>> Creating group 'clock' with GID 103.
>>> Creating group 'dialout' with GID 18.
>>> Creating group 'disk' with GID 6.
>>> Creating group 'floppy' with GID 19.
>>> Creating group 'ftp' with GID 50.
>>> Creating group 'games' with GID 20.
>>> Creating group 'input' with GID 104.
>>> Creating group 'kmem' with GID 9.
>>> Creating group 'kvm' with GID 36.
>>> Creating group 'lock' with GID 54.
>>> Creating group 'lp' with GID 7.
>>> Creating group 'mail' with GID 12.
>>> Creating group 'man' with GID 15.
>>> Creating group 'mem' with GID 8.
>>> Creating group 'nobody' with GID 65534.
>>> Creating group 'render' with GID 105.
>>> Creating group 'root' with GID 0.
>>> Creating group 'sgx' with GID 106.
>>> Creating group 'sys' with GID 3.
>>> Creating group 'tape' with GID 33.
>>> Creating group 'tty' with GID 5.
>>> Creating group 'users' with GID 100.
>>> Creating group 'utmp' with GID 22.
>>> Creating group 'video' with GID 39.
>>> Creating group 'wheel' with GID 10.
>>> Creating user 'adm' (adm) with UID 3 and GID 4.
>>> Creating group 'bin' with GID 1.
>>> Creating user 'bin' (bin) with UID 1 and GID 1.
>>> Creating group 'daemon' with GID 2.
>>> Creating user 'daemon' (daemon) with UID 2 and GID 2.
>>> Creating user 'ftp' (FTP User) with UID 14 and GID 50.
>>> Creating user 'games' (games) with UID 12 and GID 100.
>>> Creating user 'halt' (halt) with UID 7 and GID 0.
>>> Creating user 'lp' (lp) with UID 4 and GID 7.
>>> Creating user 'mail' (mail) with UID 8 and GID 12.
>>> Creating user 'nobody' (Kernel Overflow User) with UID 65534 and GID 65534.
>>> Creating user 'operator' (operator) with UID 11 and GID 0.
>>> Creating user 'root' (Super User) with UID 0 and GID 0.
>>> Creating user 'shutdown' (shutdown) with UID 6 and GID 0.
>>> Creating user 'sync' (sync) with UID 5 and GID 0.
>>> 
[ 11/187] Installing setup-0:2.15.0-28. 100% |  39.6 MiB/s | 730.6 KiB |  00m00s
>>> [RPM] /etc/hosts created as /etc/hosts.rpmnew
[ 12/187] Installing filesystem-0:3.18- 100% |   2.0 MiB/s | 212.8 KiB |  00m00s
[ 13/187] Installing qt6-srpm-macros-0: 100% |   0.0   B/s | 748.0   B |  00m00s
[ 14/187] Installing package-notes-srpm 100% |   0.0   B/s |   2.1 KiB |  00m00s
[ 15/187] Installing gnulib-l10n-0:2024 100% | 129.3 MiB/s | 661.9 KiB |  00m00s
[ 16/187] Installing coreutils-common-0 100% | 323.8 MiB/s |  10.7 MiB |  00m00s
[ 17/187] Installing pkgconf-m4-0:2.5.1 100% |   0.0   B/s |  14.7 KiB |  00m00s
[ 18/187] Installing pcre2-syntax-0:10. 100% | 138.8 MiB/s | 284.3 KiB |  00m00s
[ 19/187] Installing ncurses-base-0:6.6 100% |  57.8 MiB/s | 355.3 KiB |  00m00s
[ 20/187] Installing bash-0:5.3.9-3.fc4 100% | 216.2 MiB/s |   8.4 MiB |  00m00s
[ 21/187] Installing glibc-common-0:2.4 100% |  60.3 MiB/s |   1.3 MiB |  00m00s
[ 22/187] Installing glibc-gconv-extra- 100% | 396.5 MiB/s |  18.6 MiB |  00m00s
[ 23/187] Installing glibc-0:2.43-6.fc4 100% | 152.0 MiB/s |   6.4 MiB |  00m00s
[ 24/187] Installing ncurses-libs-0:6.6 100% | 249.2 MiB/s |   1.2 MiB |  00m00s
[ 25/187] Installing glibc-minimal-lang 100% |   0.0   B/s | 124.0   B |  00m00s
[ 26/187] Installing zlib-ng-compat-0:2 100% | 131.1 MiB/s | 134.2 KiB |  00m00s
[ 27/187] Installing bzip2-libs-0:1.0.8 100% |  71.9 MiB/s |  73.6 KiB |  00m00s
[ 28/187] Installing libgpg-error-0:1.5 100% |  48.6 MiB/s | 995.5 KiB |  00m00s
[ 29/187] Installing libstdc++-0:16.1.1 100% | 330.1 MiB/s |   3.0 MiB |  00m00s
[ 30/187] Installing libassuan-0:2.5.7- 100% | 212.6 MiB/s | 217.7 KiB |  00m00s
[ 31/187] Installing libgcrypt-0:1.12.2 100% | 240.0 MiB/s |   1.2 MiB |  00m00s
[ 32/187] Installing readline-0:8.3-4.f 100% | 276.2 MiB/s | 565.6 KiB |  00m00s
[ 33/187] Installing gmp-1:6.3.0-5.fc44 100% | 214.9 MiB/s | 660.1 KiB |  00m00s
[ 34/187] Installing xz-libs-1:5.8.2-2. 100% | 260.2 MiB/s | 266.5 KiB |  00m00s
[ 35/187] Installing libuuid-0:2.41.4-8 100% |  68.7 MiB/s |  70.3 KiB |  00m00s
[ 36/187] Installing libzstd-0:1.5.7-5. 100% | 280.4 MiB/s | 861.5 KiB |  00m00s
[ 37/187] Installing elfutils-libelf-0: 100% | 294.4 MiB/s |   1.2 MiB |  00m00s
[ 38/187] Installing popt-0:1.19-10.fc4 100% |  49.2 MiB/s | 151.3 KiB |  00m00s
[ 39/187] Installing npth-0:1.8-4.fc44. 100% |  92.2 MiB/s |  94.4 KiB |  00m00s
[ 40/187] Installing systemd-libs-0:259 100% | 307.7 MiB/s |   2.5 MiB |  00m00s
[ 41/187] Installing libblkid-0:2.41.4- 100% | 284.5 MiB/s | 291.3 KiB |  00m00s
[ 42/187] Installing libxcrypt-0:4.5.2- 100% | 134.7 MiB/s | 275.9 KiB |  00m00s
[ 43/187] Installing libsepol-0:3.10-1. 100% | 264.0 MiB/s | 810.9 KiB |  00m00s
[ 44/187] Installing sqlite-libs-0:3.51 100% | 261.2 MiB/s |   1.6 MiB |  00m00s
[ 45/187] Installing gnupg2-gpgconf-0:2 100% |  18.6 MiB/s | 323.9 KiB |  00m00s
[ 46/187] Installing pcre2-0:10.47-1.fc 100% | 233.0 MiB/s | 715.7 KiB |  00m00s
[ 47/187] Installing libselinux-0:3.10- 100% | 197.5 MiB/s | 202.2 KiB |  00m00s
[ 48/187] Installing grep-0:3.12-3.fc44 100% |  49.4 MiB/s |   1.0 MiB |  00m00s
[ 49/187] Installing findutils-1:4.10.0 100% |  83.5 MiB/s |   1.9 MiB |  00m00s
[ 50/187] Installing libattr-0:2.5.2-8. 100% |  67.6 MiB/s |  69.3 KiB |  00m00s
[ 51/187] Installing libacl-0:2.3.2-6.f 100% |  67.0 MiB/s |  68.6 KiB |  00m00s
[ 52/187] Installing sed-0:4.9-7.fc44.a 100% |  43.0 MiB/s | 881.3 KiB |  00m00s
[ 53/187] Installing libtasn1-0:4.21.0- 100% | 217.3 MiB/s | 222.5 KiB |  00m00s
[ 54/187] Installing libunistring-0:1.1 100% | 291.0 MiB/s |   1.7 MiB |  00m00s
[ 55/187] Installing libidn2-0:2.3.8-3. 100% |  55.3 MiB/s | 566.6 KiB |  00m00s
[ 56/187] Installing crypto-policies-0: 100% |  22.0 MiB/s | 157.7 KiB |  00m00s
[ 57/187] Installing xz-1:5.8.2-2.fc44. 100% |  60.3 MiB/s |   1.4 MiB |  00m00s
[ 58/187] Installing libmount-0:2.41.4- 100% | 205.7 MiB/s | 421.3 KiB |  00m00s
[ 59/187] Installing gnupg2-verify-0:2. 100% |  21.0 MiB/s | 365.7 KiB |  00m00s
[ 60/187] Installing dwz-0:0.16-3.fc44. 100% |  19.8 MiB/s | 323.8 KiB |  00m00s
[ 61/187] Installing mpfr-0:4.2.2-3.fc4 100% | 246.4 MiB/s | 757.1 KiB |  00m00s
[ 62/187] Installing gawk-0:5.3.2-3.fc4 100% | 107.5 MiB/s |   2.6 MiB |  00m00s
[ 63/187] Installing libksba-0:1.6.7-5. 100% | 195.7 MiB/s | 400.8 KiB |  00m00s
[ 64/187] Installing unzip-0:6.0-69.fc4 100% |  29.2 MiB/s | 537.3 KiB |  00m00s
[ 65/187] Installing file-libs-0:5.46-1 100% | 625.5 MiB/s |  11.9 MiB |  00m00s
[ 66/187] Installing file-0:5.46-10.fc4 100% |   8.1 MiB/s | 141.6 KiB |  00m00s
[ 67/187] Installing diffutils-0:3.12-5 100% |  73.8 MiB/s |   1.6 MiB |  00m00s
[ 68/187] Installing libeconf-0:0.7.9-3 100% |  80.5 MiB/s |  82.5 KiB |  00m00s
[ 69/187] Installing libsmartcols-0:2.4 100% | 220.2 MiB/s | 225.5 KiB |  00m00s
[ 70/187] Installing lua-libs-0:5.4.8-5 100% | 161.7 MiB/s | 331.3 KiB |  00m00s
[ 71/187] Installing json-c-0:0.18-8.fc 100% | 136.5 MiB/s | 139.7 KiB |  00m00s
[ 72/187] Installing alternatives-0:1.3 100% |   5.6 MiB/s |  91.6 KiB |  00m00s
[ 73/187] Installing libcap-ng-0:0.9.3- 100% | 159.0 MiB/s | 162.8 KiB |  00m00s
[ 74/187] Installing audit-libs-0:4.1.4 100% | 238.9 MiB/s | 489.2 KiB |  00m00s
[ 75/187] Installing pam-libs-0:1.7.2-1 100% | 109.8 MiB/s | 225.0 KiB |  00m00s
[ 76/187] Installing libcap-0:2.78-1.fc 100% |  27.9 MiB/s | 513.5 KiB |  00m00s
[ 77/187] Installing libsemanage-0:3.10 100% | 176.6 MiB/s | 361.7 KiB |  00m00s
[ 78/187] Installing libffi-0:3.5.2-2.f 100% | 153.4 MiB/s | 157.1 KiB |  00m00s
[ 79/187] Installing p11-kit-0:0.26.2-1 100% | 102.3 MiB/s |   2.8 MiB |  00m00s
[ 80/187] Installing p11-kit-trust-0:0. 100% |  22.6 MiB/s | 531.8 KiB |  00m00s
[ 81/187] Installing ngtcp2-0:1.22.1-1. 100% | 167.3 MiB/s | 342.7 KiB |  00m00s
[ 82/187] Installing openssl-libs-1:3.5 100% | 337.3 MiB/s |   7.4 MiB |  00m00s
[ 83/187] Installing coreutils-0:9.10-4 100% | 186.9 MiB/s |   8.2 MiB |  00m00s
[ 84/187] Installing ca-certificates-0: 100% |   1.4 MiB/s |   2.5 MiB |  00m02s
[ 85/187] Installing gzip-0:1.14-2.fc44 100% |  22.8 MiB/s | 443.0 KiB |  00m00s
[ 86/187] Installing libfsverity-0:1.6- 100% |  67.7 MiB/s |  69.3 KiB |  00m00s
[ 87/187] Installing libevent-0:2.1.12- 100% | 271.2 MiB/s |   1.1 MiB |  00m00s
[ 88/187] Installing rpm-sequoia-0:1.10 100% | 278.4 MiB/s |   2.2 MiB |  00m00s
[ 89/187] Installing ngtcp2-crypto-ossl 100% |  66.7 MiB/s |  68.3 KiB |  00m00s
[ 90/187] Installing liblastlog2-0:2.41 100% |  19.5 MiB/s | 139.9 KiB |  00m00s
[ 91/187] Installing util-linux-core-0: 100% |  91.3 MiB/s |   2.5 MiB |  00m00s
[ 92/187] Installing zip-0:3.0-45.fc44. 100% |  37.4 MiB/s | 765.8 KiB |  00m00s
[ 93/187] Installing gnupg2-keyboxd-0:2 100% |  32.7 MiB/s | 234.5 KiB |  00m00s
[ 94/187] Installing libpsl-0:0.21.5-7. 100% | 130.3 MiB/s | 133.4 KiB |  00m00s
[ 95/187] Installing tar-2:1.35-8.fc44. 100% | 111.3 MiB/s |   3.0 MiB |  00m00s
[ 96/187] Installing linkdupes-0:0.7.3- 100% |  36.8 MiB/s | 715.1 KiB |  00m00s
[ 97/187] Installing libselinux-utils-0 100% |  64.6 MiB/s |   1.4 MiB |  00m00s
[ 98/187] Installing systemd-standalone 100% |  19.0 MiB/s | 330.2 KiB |  00m00s
[ 99/187] Installing rpm-libs-0:6.0.1-2 100% | 243.3 MiB/s | 996.5 KiB |  00m00s
[100/187] Installing libfdisk-0:2.41.4- 100% | 136.7 MiB/s | 419.9 KiB |  00m00s
[101/187] Installing util-linux-0:2.41. 100% | 142.9 MiB/s |   6.9 MiB |  00m00s
[102/187] Installing policycoreutils-0: 100% |  45.0 MiB/s |   1.5 MiB |  00m00s
[103/187] Installing selinux-policy-0:4 100% |   1.5 MiB/s |  34.5 KiB |  00m00s
[104/187] Installing selinux-policy-tar 100% | 139.2 MiB/s |  14.9 MiB |  00m00s
[105/187] Installing libusb1-0:1.0.30-1 100% |  17.7 MiB/s | 181.4 KiB |  00m00s
>>> Running sysusers scriptlet: tpm2-tss-0:4.1.3-9.fc44.aarch64
>>> Finished sysusers scriptlet: tpm2-tss-0:4.1.3-9.fc44.aarch64
>>> Scriptlet output:
>>> Creating group 'tss' with GID 59.
>>> Creating user 'tss' (Account used for TPM access) with UID 59 and GID 59.
>>> 
[106/187] Installing tpm2-tss-0:4.1.3-9 100% | 239.7 MiB/s |   2.2 MiB |  00m00s
[107/187] Installing ima-evm-utils-libs 100% |  91.7 MiB/s |  93.9 KiB |  00m00s
[108/187] Installing gnupg2-gpg-agent-0 100% |  32.0 MiB/s | 850.9 KiB |  00m00s
[109/187] Installing zstd-0:1.5.7-5.fc4 100% |  29.1 MiB/s | 565.8 KiB |  00m00s
[110/187] Installing libxml2-0:2.12.10- 100% |  82.2 MiB/s |   1.9 MiB |  00m00s
[111/187] Installing nettle-0:3.10.1-3. 100% | 250.1 MiB/s | 768.2 KiB |  00m00s
[112/187] Installing gnutls-0:3.8.13-1. 100% | 309.1 MiB/s |   3.7 MiB |  00m00s
[113/187] Installing bzip2-0:1.0.8-23.f 100% |  10.1 MiB/s | 175.6 KiB |  00m00s
[114/187] Installing add-determinism-0: 100% |  89.6 MiB/s |   2.0 MiB |  00m00s
[115/187] Installing build-reproducibil 100% |   1.5 MiB/s |   1.5 KiB |  00m00s
[116/187] Installing cpio-0:2.15-9.fc44 100% |  52.2 MiB/s |   1.1 MiB |  00m00s
[117/187] Installing ed-0:1.22.5-2.fc44 100% |   9.2 MiB/s | 160.1 KiB |  00m00s
[118/187] Installing patch-0:2.8-4.fc44 100% |  15.2 MiB/s | 263.9 KiB |  00m00s
[119/187] Installing libpkgconf-0:2.5.1 100% | 132.0 MiB/s | 135.2 KiB |  00m00s
[120/187] Installing pkgconf-0:2.5.1-1. 100% |   6.5 MiB/s | 119.3 KiB |  00m00s
[121/187] Installing pkgconf-pkg-config 100% | 110.8 KiB/s |   1.8 KiB |  00m00s
[122/187] Installing libtool-ltdl-0:2.5 100% |  92.8 MiB/s |  95.0 KiB |  00m00s
[123/187] Installing gdbm-libs-1:1.23-1 100% | 229.9 MiB/s | 235.4 KiB |  00m00s
[124/187] Installing cyrus-sasl-lib-0:2 100% | 100.7 MiB/s |   2.4 MiB |  00m00s
[125/187] Installing openldap-0:2.6.13- 100% | 187.5 MiB/s | 768.0 KiB |  00m00s
[126/187] Installing gnupg2-dirmngr-0:2 100% |  25.3 MiB/s | 648.9 KiB |  00m00s
[127/187] Installing gnupg2-0:2.4.9-16. 100% | 174.5 MiB/s |   6.5 MiB |  00m00s
[128/187] Installing rpm-sign-libs-0:6. 100% |  66.8 MiB/s |  68.5 KiB |  00m00s
[129/187] Installing gpgverify-0:2.2-4. 100% |   9.2 MiB/s |   9.4 KiB |  00m00s
[130/187] Installing libgomp-0:16.1.1-2 100% | 290.1 MiB/s | 594.2 KiB |  00m00s
[131/187] Installing jansson-0:2.14-4.f 100% |  92.2 MiB/s |  94.4 KiB |  00m00s
[132/187] Installing lz4-libs-0:1.10.0- 100% | 193.7 MiB/s | 198.4 KiB |  00m00s
[133/187] Installing libarchive-0:3.8.7 100% | 238.7 MiB/s | 977.5 KiB |  00m00s
[134/187] Installing xxhash-libs-0:0.8. 100% |  85.1 MiB/s |  87.2 KiB |  00m00s
[135/187] Installing libbrotli-0:1.2.0- 100% | 222.5 MiB/s | 911.3 KiB |  00m00s
[136/187] Installing libcbor-0:0.13.0-2 100% | 137.6 MiB/s | 140.9 KiB |  00m00s
[137/187] Installing libfido2-0:1.16.0- 100% | 136.8 MiB/s | 280.1 KiB |  00m00s
[138/187] Installing keyutils-libs-0:1. 100% |  97.3 MiB/s |  99.6 KiB |  00m00s
[139/187] Installing libcom_err-0:1.47. 100% | 109.5 MiB/s | 112.1 KiB |  00m00s
[140/187] Installing libverto-0:0.3.2-1 100% |  69.4 MiB/s |  71.1 KiB |  00m00s
[141/187] Installing krb5-libs-0:1.22.2 100% | 253.4 MiB/s |   2.5 MiB |  00m00s
[142/187] Installing libssh-0:0.12.0-1. 100% | 234.7 MiB/s | 721.0 KiB |  00m00s
[143/187] Installing libnghttp2-0:1.68. 100% | 194.4 MiB/s | 199.1 KiB |  00m00s
[144/187] Installing libnghttp3-0:1.16. 100% | 203.2 MiB/s | 208.1 KiB |  00m00s
[145/187] Installing libcurl-0:8.18.0-6 100% | 239.7 MiB/s | 982.0 KiB |  00m00s
[146/187] Installing curl-0:8.18.0-6.fc 100% |  17.5 MiB/s | 466.8 KiB |  00m00s
[147/187] Installing rpm-0:6.0.1-2.fc44 100% |  66.5 MiB/s |   2.8 MiB |  00m00s
[148/187] Installing cmake-srpm-macros- 100% | 785.2 KiB/s | 804.0   B |  00m00s
[149/187] Installing efi-srpm-macros-0: 100% |  40.2 MiB/s |  41.2 KiB |  00m00s
[150/187] Installing java-srpm-macros-0 100% |   0.0   B/s |   1.1 KiB |  00m00s
[151/187] Installing lua-srpm-macros-0: 100% |   0.0   B/s |   1.9 KiB |  00m00s
[152/187] Installing tree-sitter-srpm-m 100% |   9.1 MiB/s |   9.3 KiB |  00m00s
[153/187] Installing zig-srpm-macros-0: 100% |   0.0   B/s |   1.9 KiB |  00m00s
[154/187] Installing filesystem-srpm-ma 100% |  38.0 MiB/s |  38.9 KiB |  00m00s
[155/187] Installing elfutils-default-y 100% | 408.6 KiB/s |   2.0 KiB |  00m00s
[156/187] Installing elfutils-libs-0:0. 100% | 243.6 MiB/s | 748.4 KiB |  00m00s
[157/187] Installing elfutils-debuginfo 100% |   7.9 MiB/s | 146.2 KiB |  00m00s
[158/187] Installing elfutils-0:0.195-1 100% | 138.0 MiB/s |   3.6 MiB |  00m00s
[159/187] Installing binutils-0:2.46-3. 100% | 299.0 MiB/s |  30.5 MiB |  00m00s
[160/187] Installing gdb-minimal-0:17.1 100% | 246.1 MiB/s |  13.5 MiB |  00m00s
[161/187] Installing debugedit-0:5.3-2. 100% |  17.6 MiB/s | 324.2 KiB |  00m00s
[162/187] Installing rpm-build-libs-0:6 100% | 129.3 MiB/s | 264.8 KiB |  00m00s
[163/187] Installing rust-srpm-macros-0 100% |   6.2 MiB/s |   6.4 KiB |  00m00s
[164/187] Installing qt5-srpm-macros-0: 100% |   0.0   B/s | 776.0   B |  00m00s
[165/187] Installing perl-srpm-macros-0 100% |   0.0   B/s |   1.1 KiB |  00m00s
[166/187] Installing openblas-srpm-macr 100% |   0.0   B/s | 392.0   B |  00m00s
[167/187] Installing ocaml-srpm-macros- 100% |   0.0   B/s |   2.1 KiB |  00m00s
[168/187] Installing kernel-srpm-macros 100% |   0.0   B/s |   2.3 KiB |  00m00s
[169/187] Installing gnat-srpm-macros-0 100% |   0.0   B/s |   1.3 KiB |  00m00s
[170/187] Installing ghc-srpm-macros-0: 100% |   0.0   B/s |   1.0 KiB |  00m00s
[171/187] Installing gap-srpm-macros-0: 100% |   0.0   B/s |   2.7 KiB |  00m00s
[172/187] Installing fpc-srpm-macros-0: 100% |   0.0   B/s | 420.0   B |  00m00s
[173/187] Installing ansible-srpm-macro 100% |  35.4 MiB/s |  36.2 KiB |  00m00s
[174/187] Installing gnome-srpm-macros- 100% |   4.0 MiB/s |   4.1 KiB |  00m00s
[175/187] Installing redhat-rpm-config- 100% |  92.7 MiB/s | 189.9 KiB |  00m00s
[176/187] Installing forge-srpm-macros- 100% |  39.3 MiB/s |  40.3 KiB |  00m00s
[177/187] Installing rpm-build-0:6.0.1- 100% |  31.2 MiB/s | 607.4 KiB |  00m00s
[178/187] Installing erlang-srpm-macros 100% |   2.4 MiB/s |   2.5 KiB |  00m00s
[179/187] Installing pyproject-srpm-mac 100% |   3.7 MiB/s |   3.8 KiB |  00m00s
[180/187] Installing fonts-srpm-macros- 100% |   9.3 MiB/s |  57.0 KiB |  00m00s
[181/187] Installing go-srpm-macros-0:3 100% |  61.6 MiB/s |  63.0 KiB |  00m00s
[182/187] Installing python-srpm-macros 100% |  51.7 MiB/s |  52.9 KiB |  00m00s
[183/187] Installing R-srpm-macros-0:1. 100% |   0.0   B/s |   4.4 KiB |  00m00s
[184/187] Installing rpm-plugin-selinux 100% |  67.3 MiB/s |  68.9 KiB |  00m00s
[185/187] Installing which-0:2.25-1.fc4 100% |   6.5 MiB/s | 125.8 KiB |  00m00s
[186/187] Installing shadow-utils-2:4.1 100% | 112.3 MiB/s |   4.5 MiB |  00m00s
[187/187] Installing info-0:7.2-9.fc44. 100% |  50.7 KiB/s | 421.9 KiB |  00m08s
Complete!
Finish: installing minimal buildroot with dnf5
Start: creating root cache
Finish: creating root cache
Finish: chroot init
INFO: Installed packages:
INFO: R-srpm-macros-1.3.7-2.fc44.noarch
add-determinism-0.7.3-2.fc44.aarch64
alternatives-1.33-5.fc44.aarch64
ansible-srpm-macros-1-20.1.fc44.noarch
audit-libs-4.1.4-1.fc44.aarch64
bash-5.3.9-3.fc44.aarch64
binutils-2.46-3.fc44.aarch64
build-reproducibility-srpm-macros-0.7.3-2.fc44.noarch
bzip2-1.0.8-23.fc44.aarch64
bzip2-libs-1.0.8-23.fc44.aarch64
ca-certificates-2025.2.80_v9.0.304-7.fc44.noarch
cmake-srpm-macros-4.3.0-1.fc44.noarch
coreutils-9.10-4.fc44.aarch64
coreutils-common-9.10-4.fc44.aarch64
cpio-2.15-9.fc44.aarch64
crypto-policies-20251128-3.git19878fe.fc44.noarch
curl-8.18.0-6.fc44.aarch64
cyrus-sasl-lib-2.1.28-35.fc44.aarch64
debugedit-5.3-2.fc44.aarch64
diffutils-3.12-5.fc44.aarch64
dwz-0.16-3.fc44.aarch64
ed-1.22.5-2.fc44.aarch64
efi-srpm-macros-6-6.fc44.noarch
elfutils-0.195-1.fc44.aarch64
elfutils-debuginfod-client-0.195-1.fc44.aarch64
elfutils-default-yama-scope-0.195-1.fc44.noarch
elfutils-libelf-0.195-1.fc44.aarch64
elfutils-libs-0.195-1.fc44.aarch64
erlang-srpm-macros-0.3.11-1.fc44.noarch
fedora-gpg-keys-44-1.noarch
fedora-release-44-18.noarch
fedora-release-common-44-18.noarch
fedora-release-identity-basic-44-18.noarch
fedora-repos-44-1.noarch
file-5.46-10.fc44.aarch64
file-libs-5.46-10.fc44.aarch64
filesystem-3.18-52.fc44.aarch64
filesystem-srpm-macros-3.18-52.fc44.noarch
findutils-4.10.0-7.fc44.aarch64
fonts-srpm-macros-5.0.0-2.fc44.noarch
forge-srpm-macros-0.4.0-4.fc44.noarch
fpc-srpm-macros-1.3-16.fc44.noarch
gap-srpm-macros-2-2.fc44.noarch
gawk-5.3.2-3.fc44.aarch64
gdb-minimal-17.1-6.fc44.aarch64
gdbm-libs-1.23-11.fc44.aarch64
ghc-srpm-macros-1.10-1.fc44.noarch
glibc-2.43-6.fc44.aarch64
glibc-common-2.43-6.fc44.aarch64
glibc-gconv-extra-2.43-6.fc44.aarch64
glibc-minimal-langpack-2.43-6.fc44.aarch64
gmp-6.3.0-5.fc44.aarch64
gnat-srpm-macros-7-2.fc44.noarch
gnome-srpm-macros-1.0-1.fc44.noarch
gnulib-l10n-20241231-2.fc44.noarch
gnupg2-2.4.9-16.fc44.aarch64
gnupg2-dirmngr-2.4.9-16.fc44.aarch64
gnupg2-gpg-agent-2.4.9-16.fc44.aarch64
gnupg2-gpgconf-2.4.9-16.fc44.aarch64
gnupg2-keyboxd-2.4.9-16.fc44.aarch64
gnupg2-verify-2.4.9-16.fc44.aarch64
gnutls-3.8.13-1.fc44.aarch64
go-srpm-macros-3.8.0-2.fc44.noarch
gpg-pubkey-36f612dcf27f7d1a48a835e4dbfcf71c6d9f90a6-6786af3b
gpgverify-2.2-4.fc44.noarch
grep-3.12-3.fc44.aarch64
gzip-1.14-2.fc44.aarch64
ima-evm-utils-libs-1.6.2-8.fc44.aarch64
info-7.2-9.fc44.aarch64
jansson-2.14-4.fc44.aarch64
java-srpm-macros-1-8.fc44.noarch
json-c-0.18-8.fc44.aarch64
kernel-srpm-macros-1.0-28.fc44.noarch
keyutils-libs-1.6.3-7.fc44.aarch64
krb5-libs-1.22.2-4.fc44.aarch64
libacl-2.3.2-6.fc44.aarch64
libarchive-3.8.7-1.fc44.aarch64
libassuan-2.5.7-5.fc44.aarch64
libattr-2.5.2-8.fc44.aarch64
libblkid-2.41.4-8.fc44.aarch64
libbrotli-1.2.0-3.fc44.aarch64
libcap-2.78-1.fc44.aarch64
libcap-ng-0.9.3-1.fc44.aarch64
libcbor-0.13.0-2.fc44.aarch64
libcom_err-1.47.3-4.fc44.aarch64
libcurl-8.18.0-6.fc44.aarch64
libeconf-0.7.9-3.fc44.aarch64
libevent-2.1.12-17.fc44.aarch64
libfdisk-2.41.4-8.fc44.aarch64
libffi-3.5.2-2.fc44.aarch64
libfido2-1.16.0-5.fc44.aarch64
libfsverity-1.6-4.fc44.aarch64
libgcc-16.1.1-2.fc44.aarch64
libgcrypt-1.12.2-1.fc44.aarch64
libgomp-16.1.1-2.fc44.aarch64
libgpg-error-1.58-2.fc44.aarch64
libidn2-2.3.8-3.fc44.aarch64
libksba-1.6.7-5.fc44.aarch64
liblastlog2-2.41.4-8.fc44.aarch64
libmount-2.41.4-8.fc44.aarch64
libnghttp2-1.68.0-4.fc44.aarch64
libnghttp3-1.16.0-1.fc44.aarch64
libpkgconf-2.5.1-1.fc44.aarch64
libpsl-0.21.5-7.fc44.aarch64
libselinux-3.10-1.fc44.aarch64
libselinux-utils-3.10-1.fc44.aarch64
libsemanage-3.10-1.fc44.aarch64
libsepol-3.10-1.fc44.aarch64
libsmartcols-2.41.4-8.fc44.aarch64
libssh-0.12.0-1.fc44.aarch64
libssh-config-0.12.0-1.fc44.noarch
libstdc++-16.1.1-2.fc44.aarch64
libtasn1-4.21.0-1.fc44.aarch64
libtool-ltdl-2.5.4-10.fc44.aarch64
libunistring-1.1-11.fc44.aarch64
libusb1-1.0.30-1.fc44.aarch64
libuuid-2.41.4-8.fc44.aarch64
libverto-0.3.2-12.fc44.aarch64
libxcrypt-4.5.2-3.fc44.aarch64
libxml2-2.12.10-6.fc44.aarch64
libzstd-1.5.7-5.fc44.aarch64
linkdupes-0.7.3-2.fc44.aarch64
lua-libs-5.4.8-5.fc44.aarch64
lua-srpm-macros-1-17.fc44.noarch
lz4-libs-1.10.0-4.fc44.aarch64
mpfr-4.2.2-3.fc44.aarch64
ncurses-base-6.6-1.fc44.noarch
ncurses-libs-6.6-1.fc44.aarch64
nettle-3.10.1-3.fc44.aarch64
ngtcp2-1.22.1-1.fc44.aarch64
ngtcp2-crypto-ossl-1.22.1-1.fc44.aarch64
npth-1.8-4.fc44.aarch64
ocaml-srpm-macros-11-3.fc44.noarch
openblas-srpm-macros-2-21.fc44.noarch
openldap-2.6.13-1.fc44.aarch64
openssl-libs-3.5.7-1.fc44.aarch64
p11-kit-0.26.2-1.fc44.aarch64
p11-kit-trust-0.26.2-1.fc44.aarch64
package-notes-srpm-macros-0.19-1.fc44.noarch
pam-libs-1.7.2-1.fc44.aarch64
patch-2.8-4.fc44.aarch64
pcre2-10.47-1.fc44.1.aarch64
pcre2-syntax-10.47-1.fc44.1.noarch
perl-srpm-macros-1-61.fc44.noarch
pkgconf-2.5.1-1.fc44.aarch64
pkgconf-m4-2.5.1-1.fc44.noarch
pkgconf-pkg-config-2.5.1-1.fc44.aarch64
policycoreutils-3.10-4.fc44.aarch64
popt-1.19-10.fc44.aarch64
publicsuffix-list-dafsa-20260116-1.fc44.noarch
pyproject-srpm-macros-1.22.2-1.fc44.noarch
python-srpm-macros-3.14-12.fc44.noarch
qt5-srpm-macros-5.15.18-2.fc44.noarch
qt6-srpm-macros-6.11.1-1.fc44.noarch
readline-8.3-4.fc44.aarch64
redhat-rpm-config-344-2.fc44.noarch
rpm-6.0.1-2.fc44.aarch64
rpm-build-6.0.1-2.fc44.aarch64
rpm-build-libs-6.0.1-2.fc44.aarch64
rpm-libs-6.0.1-2.fc44.aarch64
rpm-plugin-selinux-6.0.1-2.fc44.aarch64
rpm-sequoia-1.10.2-2.fc44.aarch64
rpm-sign-libs-6.0.1-2.fc44.aarch64
rust-srpm-macros-28.4-3.fc44.noarch
sed-4.9-7.fc44.aarch64
selinux-policy-44.3-1.fc44.noarch
selinux-policy-targeted-44.3-1.fc44.noarch
setup-2.15.0-28.fc44.noarch
shadow-utils-4.19.0-7.fc44.aarch64
sqlite-libs-3.51.2-1.fc44.aarch64
systemd-libs-259.6-1.fc44.aarch64
systemd-standalone-sysusers-259.6-1.fc44.aarch64
tar-1.35-8.fc44.aarch64
tpm2-tss-4.1.3-9.fc44.aarch64
tree-sitter-srpm-macros-0.4.2-2.fc44.noarch
unzip-6.0-69.fc44.aarch64
util-linux-2.41.4-8.fc44.aarch64
util-linux-core-2.41.4-8.fc44.aarch64
which-2.25-1.fc44.aarch64
xxhash-libs-0.8.3-4.fc44.aarch64
xz-5.8.2-2.fc44.aarch64
xz-libs-5.8.2-2.fc44.aarch64
zig-srpm-macros-1-8.fc44.noarch
zip-3.0-45.fc44.aarch64
zlib-ng-compat-2.3.3-3.fc44.aarch64
zstd-1.5.7-5.fc44.aarch64
Start: buildsrpm
Start: rpmbuild -bs
Building target platforms: aarch64
Building for target aarch64
setting SOURCE_DATE_EPOCH=1781481600
Wrote: /builddir/build/SRPMS/compucell3d-4.9.0-0.1.rc.20260615git780374e.fc44.src.rpm
Finish: rpmbuild -bs
INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-44-aarch64-1781709347.325201/root/var/log/dnf5.log
INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz
/bin/tar: Removing leading `/' from member names
Finish: buildsrpm
INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-y4thbh3h/compucell3d/compucell3d.spec) Config(child) 1 minutes 21 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
INFO: Start(/var/lib/copr-rpmbuild/results/compucell3d-4.9.0-0.1.rc.20260615git780374e.fc44.src.rpm)  Config(fedora-44-aarch64)
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-44-aarch64-bootstrap-1781709347.325201/root.
INFO: reusing tmpfs at /var/lib/mock/fedora-44-aarch64-bootstrap-1781709347.325201/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-44-aarch64-1781709347.325201/root.
INFO: calling preinit hooks
INFO: enabled root cache
Start: unpacking root cache
Finish: unpacking root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Buildroot is handled by package management downloaded with a bootstrap image:
  rpm-6.0.1-2.fc44.aarch64
  rpm-sequoia-1.10.2-2.fc44.aarch64
  dnf5-5.4.2.1-1.fc44.aarch64
  dnf5-plugins-5.4.2.1-1.fc44.aarch64
Finish: chroot init
Start: build phase for compucell3d-4.9.0-0.1.rc.20260615git780374e.fc44.src.rpm
Start: build setup for compucell3d-4.9.0-0.1.rc.20260615git780374e.fc44.src.rpm
Building target platforms: aarch64
Building for target aarch64
setting SOURCE_DATE_EPOCH=1781481600
Wrote: /builddir/build/SRPMS/compucell3d-4.9.0-0.1.rc.20260615git780374e.fc44.src.rpm
Updating and loading repositories:
 updates                                100% |  20.9 KiB/s |  10.8 KiB |  00m01s
 fedora                                 100% |  30.0 KiB/s |  13.0 KiB |  00m00s
 Copr repository                        100% |   9.4 KiB/s |   1.5 KiB |  00m00s
Repositories loaded.
Package                      Arch    Version                   Repository      Size
Installing:
 PEGTL-devel                 aarch64 0:2.8.3-15.fc44           fedora     678.1 KiB
 boost-devel                 aarch64 0:1.90.0-7.fc44           fedora     142.7 MiB
 cgnslib-devel               aarch64 0:4.5.1-3.fc44            fedora     159.7 KiB
 chrpath                     aarch64 0:0.16-28.fc44            fedora     102.2 KiB
 cmake                       aarch64 0:4.3.0-1.fc44            fedora      32.9 MiB
 double-conversion-devel     aarch64 0:3.4.0-3.fc44            fedora     103.7 KiB
 expat-devel                 aarch64 0:2.8.1-1.fc44            updates    234.5 KiB
 fmt-devel                   aarch64 0:11.2.0-4.fc44           fedora     570.1 KiB
 freetype-devel              aarch64 0:2.14.3-1.fc44           updates      8.6 MiB
 gcc-c++                     aarch64 0:16.1.1-2.fc44           updates     44.8 MiB
 gdal-devel                  aarch64 0:3.12.4-1.fc44           updates      1.7 MiB
 glew-devel                  aarch64 0:2.2.0-12.fc44           fedora       1.8 MiB
 hdf5-devel                  aarch64 0:1.14.6-7.fc44           fedora       3.3 MiB
 json-devel                  aarch64 0:3.12.0-2.fc44           fedora       1.0 MiB
 jsoncpp-devel               aarch64 0:1.9.6-3.fc44            fedora      82.2 KiB
 libX11-devel                aarch64 0:1.8.13-1.fc44           fedora       1.0 MiB
 libXcursor-devel            aarch64 0:1.2.3-4.fc44            fedora      20.5 KiB
 libXext-devel               aarch64 0:1.3.6-5.fc44            fedora      97.7 KiB
 libXt-devel                 aarch64 0:1.3.1-4.fc44            fedora       1.6 MiB
 libarchive-devel            aarch64 0:3.8.7-1.fc44            updates    183.0 KiB
 libharu-devel               aarch64 0:2.4.5-2.fc44            fedora     190.6 KiB
 libjpeg-turbo-devel         aarch64 0:3.1.3-1.fc44            fedora     353.9 KiB
 libogg-devel                aarch64 2:1.3.6-2.fc44            fedora      27.0 KiB
 libpng-devel                aarch64 2:1.6.58-1.fc44           updates    978.0 KiB
 libpq-devel                 aarch64 0:18.0-4.fc44             fedora     433.3 KiB
 libtheora-devel             aarch64 1:1.1.1-41.fc44           fedora      98.7 KiB
 libtiff-devel               aarch64 0:4.7.1-2.fc44            fedora     805.0 KiB
 libxml2-devel               aarch64 0:2.12.10-6.fc44          fedora       3.4 MiB
 lz4-devel                   aarch64 0:1.10.0-4.fc44           fedora     102.2 KiB
 mariadb-connector-c-devel   aarch64 0:3.4.8-3.fc44            fedora     246.5 KiB
 mesa-libGL-devel            aarch64 0:26.0.8-1.fc44           updates     80.8 KiB
 netcdf-cxx-devel            aarch64 0:4.2-43.fc44             fedora       1.5 MiB
 ninja-build                 aarch64 0:1.13.2-2.fc44           fedora     467.8 KiB
 openslide-devel             aarch64 0:4.0.0-14.fc44           updates    427.5 KiB
 patchelf                    aarch64 0:0.18.0-9.fc43           fedora     307.0 KiB
 proj-devel                  aarch64 0:9.8.1-1.fc44            updates    564.8 KiB
 pugixml-devel               aarch64 0:1.15-2.fc44             fedora      67.2 KiB
 python3-devel               aarch64 0:3.14.5-1.fc44           updates      2.0 MiB
 python3-numpy               aarch64 1:2.4.6-1.fc44            updates     36.3 MiB
 qt5-qtwebkit-devel          aarch64 0:5.212.0-0.98alpha4.fc44 fedora     199.6 KiB
 qt6-qtdeclarative-devel     aarch64 0:6.11.1-2.fc44           updates     25.2 MiB
 sqlite-devel                aarch64 0:3.51.2-1.fc44           fedora     694.0 KiB
 swig                        aarch64 0:4.4.1-4.fc44            updates      6.0 MiB
 utf8cpp-devel               noarch  0:4.1.0-1.fc44            updates    138.6 KiB
 vtk-devel                   aarch64 0:9.6.2-11.fc44           copr_base   32.0 MiB
 zlib-ng-compat-devel        aarch64 0:2.3.3-3.fc44            fedora     107.0 KiB
Installing dependencies:
 SDL3                        aarch64 0:3.4.10-1.fc44           updates      3.1 MiB
 abattis-cantarell-vf-fonts  noarch  0:0.301-17.fc44           fedora     192.7 KiB
 abseil-cpp                  aarch64 0:20260107.1-1.fc44       fedora       6.5 MiB
 adwaita-cursor-theme        noarch  0:50.0-1.fc44             fedora      11.4 MiB
 adwaita-icon-theme          noarch  0:50.0-1.fc44             fedora       1.1 MiB
 adwaita-icon-theme-legacy   noarch  0:46.2-7.fc44             fedora       2.1 MiB
 alsa-lib                    aarch64 0:1.2.16.1-1.fc44         updates      1.5 MiB
 annobin-docs                noarch  0:13.14-1.fc44            updates     99.3 KiB
 annobin-plugin-gcc          aarch64 0:13.14-1.fc44            updates    711.3 KiB
 armadillo                   aarch64 0:12.8.1-9.fc44           fedora     145.9 KiB
 arpack                      aarch64 0:3.9.1-9.fc44            fedora     553.6 KiB
 at-spi2-atk                 aarch64 0:2.60.4-1.fc44           updates    359.7 KiB
 at-spi2-core                aarch64 0:2.60.4-1.fc44           updates      1.7 MiB
 atk                         aarch64 0:2.60.4-1.fc44           updates    296.7 KiB
 autoconf                    noarch  0:2.72-10.fc44            fedora       2.8 MiB
 automake                    noarch  0:1.18.1-4.fc44           fedora       1.8 MiB
 avahi-glib                  aarch64 0:0.9~rc2-8.fc44          fedora      67.4 KiB
 avahi-libs                  aarch64 0:0.9~rc2-8.fc44          fedora     229.9 KiB
 blosc                       aarch64 0:1.21.6-10.fc44          fedora     129.8 KiB
 boost                       aarch64 0:1.90.0-7.fc44           fedora       1.3 KiB
 boost-atomic                aarch64 0:1.90.0-7.fc44           fedora      68.7 KiB
 boost-charconv              aarch64 0:1.90.0-7.fc44           fedora     197.6 KiB
 boost-chrono                aarch64 0:1.90.0-7.fc44           fedora      69.3 KiB
 boost-cobalt                aarch64 0:1.90.0-7.fc44           fedora     667.0 KiB
 boost-container             aarch64 0:1.90.0-7.fc44           fedora      69.3 KiB
 boost-context               aarch64 0:1.90.0-7.fc44           fedora      68.4 KiB
 boost-contract              aarch64 0:1.90.0-7.fc44           fedora     134.5 KiB
 boost-coroutine             aarch64 0:1.90.0-7.fc44           fedora      68.9 KiB
 boost-date-time             aarch64 0:1.90.0-7.fc44           fedora      68.1 KiB
 boost-fiber                 aarch64 0:1.90.0-7.fc44           fedora     134.5 KiB
 boost-filesystem            aarch64 0:1.90.0-7.fc44           fedora     198.9 KiB
 boost-graph                 aarch64 0:1.90.0-7.fc44           fedora     333.5 KiB
 boost-iostreams             aarch64 0:1.90.0-7.fc44           fedora     134.0 KiB
 boost-json                  aarch64 0:1.90.0-7.fc44           fedora     391.9 KiB
 boost-locale                aarch64 0:1.90.0-7.fc44           fedora     659.7 KiB
 boost-log                   aarch64 0:1.90.0-7.fc44           fedora       1.4 MiB
 boost-math                  aarch64 0:1.90.0-7.fc44           fedora     796.1 KiB
 boost-nowide                aarch64 0:1.90.0-7.fc44           fedora      68.7 KiB
 boost-numpy3                aarch64 0:1.90.0-7.fc44           fedora      69.3 KiB
 boost-process               aarch64 0:1.90.0-7.fc44           fedora      69.7 KiB
 boost-program-options       aarch64 0:1.90.0-7.fc44           fedora     267.1 KiB
 boost-python3               aarch64 0:1.90.0-7.fc44           fedora     268.0 KiB
 boost-random                aarch64 0:1.90.0-7.fc44           fedora      69.4 KiB
 boost-regex                 aarch64 0:1.90.0-7.fc44           fedora     265.9 KiB
 boost-serialization         aarch64 0:1.90.0-7.fc44           fedora     467.1 KiB
 boost-stacktrace            aarch64 0:1.90.0-7.fc44           fedora     203.5 KiB
 boost-test                  aarch64 0:1.90.0-7.fc44           fedora     664.9 KiB
 boost-thread                aarch64 0:1.90.0-7.fc44           fedora     135.4 KiB
 boost-timer                 aarch64 0:1.90.0-7.fc44           fedora      68.8 KiB
 boost-type_erasure          aarch64 0:1.90.0-7.fc44           fedora      69.9 KiB
 boost-url                   aarch64 0:1.90.0-7.fc44           fedora     330.3 KiB
 boost-wave                  aarch64 0:1.90.0-7.fc44           fedora     917.9 KiB
 brotli                      aarch64 0:1.2.0-3.fc44            fedora      69.5 KiB
 brotli-devel                aarch64 0:1.2.0-3.fc44            fedora      65.9 KiB
 bubblewrap                  aarch64 0:0.11.0-4.fc44           fedora     182.7 KiB
 bzip2-devel                 aarch64 0:1.0.8-23.fc44           fedora     309.8 KiB
 cairo                       aarch64 0:1.18.4-6.fc44           fedora       1.8 MiB
 cairo-devel                 aarch64 0:1.18.4-6.fc44           fedora       2.3 MiB
 cairo-gobject               aarch64 0:1.18.4-6.fc44           fedora      67.0 KiB
 cdparanoia-libs             aarch64 0:10.2-50.fc44            fedora     137.3 KiB
 cfitsio                     aarch64 0:4.6.3-2.fc44            fedora       1.7 MiB
 cgnslib                     aarch64 0:4.5.1-3.fc44            fedora       2.1 MiB
 cgnslib-common              noarch  0:4.5.1-3.fc44            fedora     508.9 KiB
 cgnslib-libs                aarch64 0:4.5.1-3.fc44            fedora     920.0 KiB
 cli11-devel                 noarch  0:2.6.2-1.fc44            fedora     701.2 KiB
 cmake-data                  noarch  0:4.3.0-1.fc44            fedora       9.4 MiB
 cmake-filesystem            aarch64 0:4.3.0-1.fc44            fedora       0.0   B
 cmake-rpm-macros            noarch  0:4.3.0-1.fc44            fedora       8.4 KiB
 colord-libs                 aarch64 0:1.4.8-4.fc44            fedora     969.8 KiB
 cpp                         aarch64 0:16.1.1-2.fc44           updates     40.8 MiB
 cups-filesystem             noarch  1:2.4.19-3.fc44           updates      0.0   B
 cups-libs                   aarch64 1:2.4.19-3.fc44           updates    730.8 KiB
 dbus                        aarch64 1:1.16.2-1.fc44           fedora       0.0   B
 dbus-libs                   aarch64 1:1.16.2-1.fc44           fedora     397.5 KiB
 default-fonts-core-sans     noarch  0:4.3-1.fc44              fedora      11.9 KiB
 double-conversion           aarch64 0:3.4.0-3.fc44            fedora     141.1 KiB
 duktape                     aarch64 0:2.7.0-11.fc44           fedora     671.6 KiB
 emacs-filesystem            aarch64 1:30.2-2.fc44             fedora       0.0   B
 expat                       aarch64 0:2.8.1-1.fc44            updates    371.5 KiB
 flexiblas                   aarch64 0:3.5.0-2.fc44            fedora      38.0 KiB
 flexiblas-netlib            aarch64 0:3.5.0-2.fc44            fedora      14.2 MiB
 flexiblas-netlib64          aarch64 0:3.5.0-2.fc44            fedora      14.0 MiB
 flexiblas-openblas-openmp   aarch64 0:3.5.0-2.fc44            fedora      67.2 KiB
 flexiblas-openblas-openmp64 aarch64 0:3.5.0-2.fc44            fedora      67.2 KiB
 fmt                         aarch64 0:11.2.0-4.fc44           fedora     262.3 KiB
 fontconfig                  aarch64 0:2.17.0-4.fc44           fedora       1.2 MiB
 fontconfig-devel            aarch64 0:2.17.0-4.fc44           fedora     123.6 KiB
 fonts-filesystem            noarch  1:5.0.0-2.fc44            fedora       0.0   B
 freetype                    aarch64 0:2.14.3-1.fc44           updates    878.6 KiB
 freexl                      aarch64 0:2.0.0-20.fc44           fedora      93.3 KiB
 fribidi                     aarch64 0:1.0.16-4.fc44           fedora     246.0 KiB
 gcc                         aarch64 0:16.1.1-2.fc44           updates    112.5 MiB
 gcc-gfortran                aarch64 0:16.1.1-2.fc44           updates     43.1 MiB
 gcc-plugin-annobin          aarch64 0:16.1.1-2.fc44           updates     69.2 KiB
 gdal-libs                   aarch64 0:3.12.4-1.fc44           updates     30.3 MiB
 gdk-pixbuf2                 aarch64 0:2.44.4-2.fc44           fedora       2.6 MiB
 gdk-pixbuf2-devel           aarch64 0:2.44.4-2.fc44           fedora       2.3 MiB
 geos                        aarch64 0:3.14.1-2.fc44           fedora       4.0 MiB
 gettext                     aarch64 0:0.26-5.fc44             updates     13.5 MiB
 gettext-common-devel        noarch  0:0.26-5.fc44             updates    593.4 KiB
 gettext-devel               aarch64 0:0.26-5.fc44             updates      1.5 MiB
 gettext-envsubst            aarch64 0:0.26-5.fc44             updates    107.5 KiB
 gettext-libs                aarch64 0:0.26-5.fc44             updates      2.4 MiB
 gettext-runtime             aarch64 0:0.26-5.fc44             updates    906.3 KiB
 giflib                      aarch64 0:6.1.3-2.fc44            updates    138.2 KiB
 glfw                        aarch64 1:3.4-6.fc44              fedora     421.1 KiB
 glib-networking             aarch64 0:2.80.1-4.fc44           fedora     886.8 KiB
 glib2                       aarch64 0:2.88.1-1.fc44           updates     15.8 MiB
 glib2-devel                 aarch64 0:2.88.1-1.fc44           updates     16.0 MiB
 glibc-devel                 aarch64 0:2.43-6.fc44             updates      2.3 MiB
 glx-utils                   aarch64 0:9.0.0-11.fc44           fedora     590.1 KiB
 glycin-devel                aarch64 0:2.1.1-1.fc44            fedora     126.2 KiB
 glycin-libs                 aarch64 0:2.1.1-1.fc44            fedora       4.1 MiB
 glycin-loaders              aarch64 0:2.1.1-1.fc44            fedora      13.0 MiB
 google-noto-fonts-common    noarch  0:20251201-2.fc44         fedora      17.7 KiB
 google-noto-sans-vf-fonts   noarch  0:20251201-2.fc44         fedora       1.4 MiB
 gpgme                       aarch64 0:2.0.1-4.fc44            updates    761.5 KiB
 gpgmepp                     aarch64 0:2.0.1-4.fc44            updates    458.5 KiB
 graphene                    aarch64 0:1.10.8-4.fc44           fedora     178.5 KiB
 graphite2                   aarch64 0:1.3.14-20.fc44          fedora     239.3 KiB
 graphite2-devel             aarch64 0:1.3.14-20.fc44          fedora      49.3 KiB
 groff-base                  aarch64 0:1.23.0-12.fc44          fedora       4.2 MiB
 gsettings-desktop-schemas   aarch64 0:50.1-1.fc44             updates      6.1 MiB
 gstreamer1                  aarch64 0:1.28.4-1.fc44           updates      5.8 MiB
 gstreamer1-plugins-base     aarch64 0:1.28.4-1.fc44           updates      8.5 MiB
 gtk-update-icon-cache       aarch64 0:3.24.52-1.fc44          fedora      94.0 KiB
 gtk3                        aarch64 0:3.24.52-1.fc44          fedora      23.1 MiB
 harfbuzz                    aarch64 0:14.1.0-2.fc44           updates      2.7 MiB
 harfbuzz-cairo              aarch64 0:14.1.0-2.fc44           updates     68.2 KiB
 harfbuzz-devel              aarch64 0:14.1.0-2.fc44           updates      6.3 MiB
 harfbuzz-gpu                aarch64 0:14.1.0-2.fc44           updates    131.8 KiB
 harfbuzz-icu                aarch64 0:14.1.0-2.fc44           updates     67.3 KiB
 harfbuzz-raster             aarch64 0:14.1.0-2.fc44           updates    197.9 KiB
 harfbuzz-vector             aarch64 0:14.1.0-2.fc44           updates    133.1 KiB
 hdf-libs                    aarch64 0:4.3.0-5.fc44            fedora     722.6 KiB
 hdf5                        aarch64 0:1.14.6-7.fc44           fedora       7.0 MiB
 hicolor-icon-theme          noarch  0:0.18-3.fc44             fedora      72.4 KiB
 highway                     aarch64 0:1.3.0-2.fc44            fedora       1.5 MiB
 hwdata                      noarch  0:0.408-1.fc44            updates     10.0 MiB
 hyphen                      aarch64 0:2.8.8-28.fc44           fedora      91.5 KiB
 imath                       aarch64 0:3.1.12-6.fc44           fedora     387.6 KiB
 iso-codes                   noarch  0:4.20.1-3.fc44           fedora      22.3 MiB
 jbigkit-libs                aarch64 0:2.1-33.fc44             fedora     181.2 KiB
 json-glib                   aarch64 0:1.10.8-5.fc44           fedora     616.2 KiB
 jsoncpp                     aarch64 0:1.9.6-3.fc44            fedora     271.7 KiB
 kernel-headers              aarch64 0:7.0.6-200.fc44          updates      6.8 MiB
 keyutils-libs-devel         aarch64 0:1.6.3-7.fc44            fedora      48.2 KiB
 krb5-devel                  aarch64 0:1.22.2-4.fc44           updates    709.9 KiB
 lcms2                       aarch64 0:2.16-7.fc44             fedora     484.7 KiB
 lcms2-devel                 aarch64 0:2.16-7.fc44             fedora     135.7 KiB
 libGLEW                     aarch64 0:2.2.0-12.fc44           fedora     840.3 KiB
 libICE                      aarch64 0:1.1.2-4.fc44            fedora     222.2 KiB
 libICE-devel                aarch64 0:1.1.2-4.fc44            fedora     261.8 KiB
 libSM                       aarch64 0:1.2.5-4.fc44            fedora     128.9 KiB
 libSM-devel                 aarch64 0:1.2.5-4.fc44            fedora      18.8 KiB
 libX11                      aarch64 0:1.8.13-1.fc44           fedora       1.3 MiB
 libX11-common               noarch  0:1.8.13-1.fc44           fedora       1.1 MiB
 libX11-xcb                  aarch64 0:1.8.13-1.fc44           fedora      66.9 KiB
 libXau                      aarch64 0:1.0.12-4.fc44           fedora     120.8 KiB
 libXau-devel                aarch64 0:1.0.12-4.fc44           fedora       7.3 KiB
 libXcomposite               aarch64 0:0.4.6-7.fc44            fedora      96.3 KiB
 libXcursor                  aarch64 0:1.2.3-4.fc44            fedora      69.3 KiB
 libXdamage                  aarch64 0:1.1.6-7.fc44            fedora      95.5 KiB
 libXext                     aarch64 0:1.3.6-5.fc44            fedora     145.7 KiB
 libXfixes                   aarch64 0:6.0.1-7.fc44            fedora      70.1 KiB
 libXfixes-devel             aarch64 0:6.0.1-7.fc44            fedora       9.2 KiB
 libXft                      aarch64 0:2.3.8-10.fc44           fedora     192.2 KiB
 libXi                       aarch64 0:1.8.3-1.fc44            updates    136.5 KiB
 libXinerama                 aarch64 0:1.1.5-10.fc44           fedora      70.8 KiB
 libXmu                      aarch64 0:1.2.1-5.fc44            fedora     263.0 KiB
 libXrandr                   aarch64 0:1.5.4-7.fc44            fedora      71.5 KiB
 libXrender                  aarch64 0:0.9.12-4.fc44           fedora      69.9 KiB
 libXrender-devel            aarch64 0:0.9.12-4.fc44           fedora      50.1 KiB
 libXt                       aarch64 0:1.3.1-4.fc44            fedora     477.4 KiB
 libXtst                     aarch64 0:1.2.5-4.fc44            fedora      73.3 KiB
 libXv                       aarch64 0:1.0.13-4.fc44           fedora      69.9 KiB
 libXxf86vm                  aarch64 0:1.1.6-4.fc44            fedora      69.1 KiB
 libaec                      aarch64 0:1.1.5-1.fc44            fedora     154.3 KiB
 libaec-devel                aarch64 0:1.1.5-1.fc44            fedora      22.5 KiB
 libaom                      aarch64 0:3.13.3-1.fc44           updates      3.8 MiB
 libarrow                    aarch64 0:23.0.1-1.fc44           fedora      11.4 MiB
 libarrow-acero-libs         aarch64 0:23.0.1-1.fc44           fedora       1.3 MiB
 libarrow-compute-libs       aarch64 0:23.0.1-1.fc44           fedora      11.0 MiB
 libarrow-dataset-libs       aarch64 0:23.0.1-1.fc44           fedora       1.4 MiB
 libarrow-doc                noarch  0:23.0.1-1.fc44           fedora     119.1 KiB
 libasan                     aarch64 0:16.1.1-2.fc44           updates      1.5 MiB
 libatomic                   aarch64 0:16.1.1-2.fc44           updates     77.7 KiB
 libb2                       aarch64 0:0.98.1-15.fc44          fedora      74.0 KiB
 libblkid-devel              aarch64 0:2.41.4-8.fc44           updates     44.9 KiB
 libcloudproviders           aarch64 0:0.4.0-1.fc44            fedora     156.3 KiB
 libcom_err-devel            aarch64 0:1.47.3-4.fc44           fedora      16.7 KiB
 libcurl-devel               aarch64 0:8.18.0-6.fc44           updates      1.4 MiB
 libdatrie                   aarch64 0:0.2.14-2.fc44           fedora      93.7 KiB
 libdav1d                    aarch64 0:1.5.3-1.fc44            fedora     856.5 KiB
 libdecor                    aarch64 0:0.2.5-2.fc44            fedora     208.8 KiB
 libdeflate                  aarch64 0:1.25-3.fc44             fedora     163.0 KiB
 libdicom                    aarch64 0:1.2.0-3.fc44            fedora     518.0 KiB
 libdicom-devel              aarch64 0:1.2.0-3.fc44            fedora      47.7 KiB
 libdrm                      aarch64 0:2.4.134-1.fc44          updates    765.3 KiB
 libdrm-devel                aarch64 0:2.4.134-1.fc44          updates    791.1 KiB
 libedit                     aarch64 0:3.1-59.20260512cvs.fc44 updates    280.3 KiB
 libepoxy                    aarch64 0:1.5.10-12.fc44          fedora       1.2 MiB
 libevdev                    aarch64 0:1.13.6-2.fc44           fedora     133.9 KiB
 libfbclient2                aarch64 0:5.0.4.1812-1.fc44       updates      3.4 MiB
 libffi-devel                aarch64 0:3.5.2-2.fc44            fedora      30.7 KiB
 libgeotiff                  aarch64 0:1.7.4-5.fc44            fedora     517.6 KiB
 libgfortran                 aarch64 0:16.1.1-2.fc44           updates      1.7 MiB
 libglvnd                    aarch64 1:1.7.0-9.fc44            fedora       1.3 MiB
 libglvnd-core-devel         aarch64 1:1.7.0-9.fc44            fedora      40.3 KiB
 libglvnd-devel              aarch64 1:1.7.0-9.fc44            fedora       2.1 MiB
 libglvnd-egl                aarch64 1:1.7.0-9.fc44            fedora      68.7 KiB
 libglvnd-gles               aarch64 1:1.7.0-9.fc44            fedora     394.0 KiB
 libglvnd-glx                aarch64 1:1.7.0-9.fc44            fedora       1.0 MiB
 libglvnd-opengl             aarch64 1:1.7.0-9.fc44            fedora     329.0 KiB
 libgta                      aarch64 0:1.2.1-17.fc44           fedora      94.0 KiB
 libgudev                    aarch64 0:238-9.fc44              fedora     103.6 KiB
 libgusb                     aarch64 0:0.4.9-5.fc44            fedora     181.9 KiB
 libharu                     aarch64 0:2.4.5-2.fc44            fedora       1.7 MiB
 libheif                     aarch64 0:1.21.2-1.fc44           fedora       1.7 MiB
 libicu                      aarch64 0:77.1-2.fc44             fedora      36.5 MiB
 libicu-devel                aarch64 0:77.1-2.fc44             fedora       5.1 MiB
 libidn2-devel               aarch64 0:2.3.8-3.fc44            fedora     149.1 KiB
 libinput                    aarch64 0:1.31.3-1.fc44           updates    952.5 KiB
 libjpeg-turbo               aarch64 0:3.1.3-1.fc44            fedora     677.7 KiB
 libjxl                      aarch64 1:0.11.2-1.fc44           updates      2.6 MiB
 libkadm5                    aarch64 0:1.22.2-4.fc44           updates    266.0 KiB
 libkml                      aarch64 0:1.3.0-58.fc44           updates      1.2 MiB
 liblerc                     aarch64 0:4.0.0-10.fc44           fedora     546.3 KiB
 liblerc-devel               aarch64 0:4.0.0-10.fc44           fedora       4.3 MiB
 libmount-devel              aarch64 0:2.41.4-8.fc44           updates     65.5 KiB
 libmpc                      aarch64 0:1.4.1-1.fc44            updates    216.8 KiB
 libnghttp2-devel            aarch64 0:1.68.0-4.fc44           updates    288.0 KiB
 libnghttp3-devel            aarch64 0:1.16.0-1.fc44           updates    112.2 KiB
 libogg                      aarch64 2:1.3.6-2.fc44            fedora      77.7 KiB
 libopenjph                  aarch64 0:0.25.3-3.fc44           fedora     325.6 KiB
 liborc2                     aarch64 0:2.2.2-2.fc44            fedora       1.9 MiB
 libpciaccess                aarch64 0:0.16-17.fc44            fedora      72.4 KiB
 libpciaccess-devel          aarch64 0:0.16-17.fc44            fedora      15.3 KiB
 libpng                      aarch64 2:1.6.58-1.fc44           updates    269.7 KiB
 libpq                       aarch64 0:18.0-4.fc44             fedora       1.0 MiB
 libproxy                    aarch64 0:0.5.12-2.fc44           fedora     166.0 KiB
 libpsl-devel                aarch64 0:0.21.5-7.fc44           fedora     110.2 KiB
 libqhull_r                  aarch64 1:8.0.2-8.fc44            fedora     455.3 KiB
 librsvg2                    aarch64 0:2.62.3-1.fc44           updates      4.7 MiB
 librttopo                   aarch64 0:1.1.0-19.fc44           fedora     544.5 KiB
 libseccomp                  aarch64 0:2.6.0-3.fc44            fedora     244.9 KiB
 libseccomp-devel            aarch64 0:2.6.0-3.fc44            fedora     169.7 KiB
 libselinux-devel            aarch64 0:3.10-1.fc44             fedora     122.2 KiB
 libsepol-devel              aarch64 0:3.10-1.fc44             fedora     121.5 KiB
 libsoup3                    aarch64 0:3.6.6-8.fc44            updates      1.2 MiB
 libspatialite               aarch64 0:5.1.0-12.fc44           fedora      15.0 MiB
 libssh-devel                aarch64 0:0.12.0-1.fc44           fedora     203.5 KiB
 libstdc++-devel             aarch64 0:16.1.1-2.fc44           updates     40.3 MiB
 libstemmer                  aarch64 0:3.0.1-11.fc44           fedora     725.3 KiB
 libtextstyle                aarch64 0:0.26-5.fc44             updates    397.6 KiB
 libthai                     aarch64 0:0.1.30-2.fc44           fedora     824.9 KiB
 libtheora                   aarch64 1:1.1.1-41.fc44           fedora     468.3 KiB
 libtiff                     aarch64 0:4.7.1-2.fc44            fedora     659.0 KiB
 libtinysparql               aarch64 0:3.11.1-1.fc44           updates      1.1 MiB
 libtirpc                    aarch64 0:1.3.7-2.fc44            fedora     211.9 KiB
 libtommath                  aarch64 0:1.3.1~rc1-7.fc44        fedora     134.3 KiB
 libubsan                    aarch64 0:16.1.1-2.fc44           updates    475.9 KiB
 libunwind                   aarch64 0:1.8.3-1.fc44            fedora     351.8 KiB
 libuuid-devel               aarch64 0:2.41.4-8.fc44           updates     41.0 KiB
 libuv                       aarch64 1:1.51.0-3.fc44           fedora     605.9 KiB
 libverto-devel              aarch64 0:0.3.2-12.fc44           fedora      25.7 KiB
 libvisual                   aarch64 1:0.4.2-4.fc44            fedora     488.5 KiB
 libvorbis                   aarch64 1:1.3.7-14.fc44           fedora     845.2 KiB
 libwacom                    aarch64 0:2.19.0-1.fc44           updates    150.1 KiB
 libwacom-data               noarch  0:2.19.0-1.fc44           updates      1.4 MiB
 libwayland-client           aarch64 0:1.24.0-3.fc44           fedora      69.9 KiB
 libwayland-cursor           aarch64 0:1.24.0-3.fc44           fedora      81.2 KiB
 libwayland-egl              aarch64 0:1.24.0-3.fc44           fedora      68.3 KiB
 libwayland-server           aarch64 0:1.24.0-3.fc44           fedora     134.5 KiB
 libwebp                     aarch64 0:1.6.0-3.fc44            fedora     816.8 KiB
 libwebp-devel               aarch64 0:1.6.0-3.fc44            fedora     121.7 KiB
 libxcb                      aarch64 0:1.17.0-7.fc44           fedora       2.1 MiB
 libxcb-devel                aarch64 0:1.17.0-7.fc44           fedora       2.6 MiB
 libxcrypt-devel             aarch64 0:4.5.2-3.fc44            fedora      31.0 KiB
 libxkbcommon                aarch64 0:1.13.1-2.fc44           fedora     471.5 KiB
 libxkbcommon-devel          aarch64 0:1.13.1-2.fc44           fedora     393.4 KiB
 libxkbcommon-x11            aarch64 0:1.13.1-2.fc44           fedora      67.4 KiB
 libxshmfence                aarch64 0:1.3.2-8.fc44            fedora      68.4 KiB
 libxslt                     aarch64 0:1.1.43-6.fc44           fedora     547.8 KiB
 libzip                      aarch64 0:1.11.4-3.fc44           fedora     135.6 KiB
 libzstd-devel               aarch64 0:1.5.7-5.fc44            fedora     217.6 KiB
 llvm-filesystem             aarch64 0:22.1.7-1.fc44           updates      0.0   B
 llvm-libs                   aarch64 0:22.1.7-1.fc44           updates    135.1 MiB
 lm_sensors-libs             aarch64 0:3.6.0-24.fc44           fedora      93.7 KiB
 lzo                         aarch64 0:2.10-16.fc44            fedora     162.8 KiB
 lzo-devel                   aarch64 0:2.10-16.fc44            fedora     212.2 KiB
 lzo-minilzo                 aarch64 0:2.10-16.fc44            fedora      88.5 KiB
 m4                          aarch64 0:1.4.21-1.fc44           fedora     888.6 KiB
 make                        aarch64 1:4.4.1-12.fc44           fedora       1.8 MiB
 mariadb-connector-c         aarch64 0:3.4.8-3.fc44            fedora     995.0 KiB
 mariadb-connector-c-config  noarch  0:3.4.8-3.fc44            fedora     497.0   B
 mesa-dri-drivers            aarch64 0:26.0.8-1.fc44           updates     38.3 MiB
 mesa-filesystem             aarch64 0:26.0.8-1.fc44           updates      3.6 KiB
 mesa-libEGL                 aarch64 0:26.0.8-1.fc44           updates    394.4 KiB
 mesa-libGL                  aarch64 0:26.0.8-1.fc44           updates    397.9 KiB
 mesa-libGLU                 aarch64 0:9.0.3-8.fc44            fedora     329.5 KiB
 mesa-libGLU-devel           aarch64 0:9.0.3-8.fc44            fedora      17.0 KiB
 mesa-libgbm                 aarch64 0:26.0.8-1.fc44           updates     67.7 KiB
 minizip-ng-compat           aarch64 0:4.1.0-1.fc44            fedora     198.4 KiB
 mpdecimal                   aarch64 0:4.0.1-3.fc44            fedora     281.1 KiB
 mtdev                       aarch64 0:1.1.6-12.fc44           fedora      69.1 KiB
 muParser                    aarch64 0:2.3.5-5.fc44            fedora     552.6 KiB
 ncurses                     aarch64 0:6.6-1.fc44              fedora     895.4 KiB
 netcdf                      aarch64 0:4.9.3-2.fc44            fedora       3.1 MiB
 netcdf-cxx                  aarch64 0:4.2-43.fc44             fedora     135.0 KiB
 netcdf-devel                aarch64 0:4.9.3-2.fc44            fedora     397.7 KiB
 ngtcp2-crypto-ossl-devel    aarch64 0:1.22.1-1.fc44           updates      7.5 KiB
 ngtcp2-devel                aarch64 0:1.22.1-1.fc44           updates    262.8 KiB
 noopenh264                  aarch64 0:2.6.0-4.fc44            fedora      95.1 KiB
 nspr                        aarch64 0:4.39-1.fc44             updates    419.4 KiB
 nss                         aarch64 0:3.124.0-1.fc44          updates      2.0 MiB
 nss-softokn                 aarch64 0:3.124.0-1.fc44          updates      2.2 MiB
 nss-softokn-freebl          aarch64 0:3.124.0-1.fc44          updates    870.3 KiB
 nss-sysinit                 aarch64 0:3.124.0-1.fc44          updates     70.0 KiB
 nss-util                    aarch64 0:3.124.0-1.fc44          updates    216.8 KiB
 openblas                    aarch64 0:0.3.29-2.fc43           fedora     111.7 KiB
 openblas-openmp             aarch64 0:0.3.29-2.fc43           fedora      20.4 MiB
 openblas-openmp64           aarch64 0:0.3.29-2.fc43           fedora      20.2 MiB
 openexr-libs                aarch64 0:3.2.4-7.fc44            fedora       6.6 MiB
 openjpeg                    aarch64 0:2.5.4-3.fc44            fedora     412.2 KiB
 openjpeg-devel              aarch64 0:2.5.4-3.fc44            fedora      75.7 KiB
 openjpeg-tools              aarch64 0:2.5.4-3.fc44            fedora     272.7 KiB
 openslide                   aarch64 0:4.0.0-14.fc44           updates    302.6 KiB
 openssl-devel               aarch64 1:3.5.7-1.fc44            updates      4.5 MiB
 opus                        aarch64 0:1.6-2.fc44              fedora     455.8 KiB
 orc                         aarch64 0:0.4.41-3.fc44           fedora     874.1 KiB
 pango                       aarch64 0:1.57.1-1.fc44           fedora       1.2 MiB
 parquet-libs                aarch64 0:23.0.1-1.fc44           fedora       3.5 MiB
 pcre2-devel                 aarch64 0:10.47-1.fc44.1          fedora       2.1 MiB
 pcre2-utf16                 aarch64 0:10.47-1.fc44.1          fedora     582.9 KiB
 pcre2-utf32                 aarch64 0:10.47-1.fc44.1          fedora     582.9 KiB
 perl-AutoLoader             noarch  0:5.74-524.fc44           updates     20.6 KiB
 perl-B                      aarch64 0:1.89-524.fc44           updates    545.3 KiB
 perl-Carp                   noarch  0:1.54-521.fc44           fedora      46.6 KiB
 perl-Class-Struct           noarch  0:0.68-524.fc44           updates     25.4 KiB
 perl-Data-Dumper            aarch64 0:2.192-523.fc44          updates    135.6 KiB
 perl-Digest                 noarch  0:1.20-521.fc44           fedora      35.3 KiB
 perl-Digest-MD5             aarch64 0:2.59-521.fc44           fedora     103.6 KiB
 perl-DynaLoader             aarch64 0:1.57-524.fc44           updates     32.1 KiB
 perl-Encode                 aarch64 4:3.21-521.fc44           fedora       4.8 MiB
 perl-English                noarch  0:1.11-524.fc44           updates      6.2 KiB
 perl-Errno                  aarch64 0:1.38-524.fc44           updates      8.4 KiB
 perl-Exporter               noarch  0:5.79-521.fc44           fedora      54.3 KiB
 perl-Fcntl                  aarch64 0:1.20-524.fc44           updates     92.7 KiB
 perl-File-Basename          noarch  0:2.86-524.fc44           updates     14.0 KiB
 perl-File-Compare           noarch  0:1.100.800-524.fc44      updates      5.6 KiB
 perl-File-Copy              noarch  0:2.41-524.fc44           updates     19.7 KiB
 perl-File-Find              noarch  0:1.44-524.fc44           updates     42.0 KiB
 perl-File-Path              noarch  0:2.18-522.fc44           fedora      63.5 KiB
 perl-File-Temp              noarch  1:0.231.200-2.fc44        fedora     163.7 KiB
 perl-File-stat              noarch  0:1.14-524.fc44           updates     12.5 KiB
 perl-FileHandle             noarch  0:2.05-524.fc44           updates      9.4 KiB
 perl-Getopt-Long            noarch  1:2.58-521.fc44           fedora     144.5 KiB
 perl-Getopt-Std             noarch  0:1.14-524.fc44           updates     11.2 KiB
 perl-HTTP-Tiny              noarch  0:0.094-1.fc44            updates    158.2 KiB
 perl-IO                     aarch64 0:1.55-524.fc44           updates    191.3 KiB
 perl-IO-Socket-IP           noarch  0:0.43-522.fc44           fedora     100.3 KiB
 perl-IO-Socket-SSL          noarch  0:2.098-2.fc44            fedora     723.5 KiB
 perl-IPC-Open3              noarch  0:1.24-524.fc44           updates     27.7 KiB
 perl-MIME-Base32            noarch  0:1.303-25.fc44           fedora      30.7 KiB
 perl-MIME-Base64            aarch64 0:3.16-521.fc44           fedora      93.9 KiB
 perl-Net-SSLeay             aarch64 0:1.94-12.fc44            fedora       1.4 MiB
 perl-POSIX                  aarch64 0:2.23-524.fc44           updates    261.5 KiB
 perl-PathTools              aarch64 0:3.94-521.fc44           fedora     223.9 KiB
 perl-Pod-Escapes            noarch  1:1.07-521.fc44           fedora      24.9 KiB
 perl-Pod-Perldoc            noarch  0:3.28.01-522.fc44        fedora     163.7 KiB
 perl-Pod-Simple             noarch  1:3.47-4.fc44             fedora     565.3 KiB
 perl-Pod-Usage              noarch  4:2.05-521.fc44           fedora      86.3 KiB
 perl-Scalar-List-Utils      aarch64 5:1.70-2.fc44             fedora     152.8 KiB
 perl-SelectSaver            noarch  0:1.02-524.fc44           updates      2.2 KiB
 perl-Socket                 aarch64 4:2.040-3.fc44            fedora     144.1 KiB
 perl-Storable               aarch64 1:3.37-522.fc44           fedora     243.1 KiB
 perl-Symbol                 noarch  0:1.09-524.fc44           updates      6.8 KiB
 perl-Term-ANSIColor         noarch  0:5.01-522.fc44           fedora      97.5 KiB
 perl-Term-Cap               noarch  0:1.18-521.fc44           fedora      29.3 KiB
 perl-Text-ParseWords        noarch  0:3.31-521.fc44           fedora      13.6 KiB
 perl-Text-Tabs+Wrap         noarch  0:2024.001-521.fc44       fedora      22.6 KiB
 perl-Thread-Queue           noarch  0:3.14-521.fc44           fedora      28.9 KiB
 perl-Time-HiRes             aarch64 4:1.9778-521.fc44         fedora     151.6 KiB
 perl-Time-Local             noarch  2:1.350-521.fc44          fedora      69.0 KiB
 perl-URI                    noarch  0:5.35-1.fc44             updates    268.2 KiB
 perl-base                   noarch  0:2.27-524.fc44           updates     12.6 KiB
 perl-constant               noarch  0:1.33-522.fc44           fedora      26.2 KiB
 perl-if                     noarch  0:0.61.000-524.fc44       updates      5.8 KiB
 perl-interpreter            aarch64 4:5.42.2-524.fc44         updates    174.7 KiB
 perl-libnet                 noarch  0:3.15-522.fc44           fedora     289.4 KiB
 perl-libs                   aarch64 4:5.42.2-524.fc44         updates     11.6 MiB
 perl-locale                 noarch  0:1.13-524.fc44           updates      6.1 KiB
 perl-mro                    aarch64 0:1.29-524.fc44           updates     81.5 KiB
 perl-overload               noarch  0:1.40-524.fc44           updates     71.6 KiB
 perl-overloading            noarch  0:0.02-524.fc44           updates      4.9 KiB
 perl-parent                 noarch  1:0.244-521.fc44          fedora      10.3 KiB
 perl-podlators              noarch  1:6.0.2-521.fc44          fedora     317.5 KiB
 perl-threads                aarch64 1:2.43-521.fc44           fedora     134.9 KiB
 perl-threads-shared         aarch64 0:1.70-521.fc44           fedora     103.5 KiB
 perl-vars                   noarch  0:1.05-524.fc44           updates      3.9 KiB
 pixman                      aarch64 0:0.46.2-3.fc44           fedora     654.3 KiB
 pixman-devel                aarch64 0:0.46.2-3.fc44           fedora      56.1 KiB
 poppler                     aarch64 0:26.01.0-3.fc44          fedora       3.6 MiB
 poppler-data                noarch  0:0.4.11-11.fc44          fedora      12.3 MiB
 proj                        aarch64 0:9.8.1-1.fc44            updates      4.3 MiB
 proj-data                   noarch  0:9.8.1-1.fc44            updates     10.0 MiB
 protobuf                    aarch64 0:3.19.6-20.fc44          fedora       3.1 MiB
 publicsuffix-list           noarch  0:20260116-1.fc44         fedora     342.2 KiB
 pugixml                     aarch64 0:1.15-2.fc44             fedora     265.2 KiB
 pyproject-rpm-macros        noarch  0:1.22.2-1.fc44           updates    147.2 KiB
 python-pip-wheel            noarch  0:26.0.1-2.fc44           fedora       1.2 MiB
 python-rpm-macros           noarch  0:3.14-12.fc44            fedora      28.0 KiB
 python3                     aarch64 0:3.14.5-1.fc44           updates     84.8 KiB
 python3-libs                aarch64 0:3.14.5-1.fc44           updates     45.4 MiB
 python3-numpy-f2py          aarch64 1:2.4.6-1.fc44            updates      2.1 MiB
 python3-packaging           noarch  0:25.0-8.fc44             fedora     607.4 KiB
 python3-rpm-generators      noarch  0:14-14.fc44              fedora      81.7 KiB
 python3-rpm-macros          noarch  0:3.14-12.fc44            fedora       6.5 KiB
 python3-vtk                 aarch64 0:9.6.2-11.fc44           copr_base  116.0 MiB
 qt-settings                 noarch  0:43.101-3.fc44           fedora       1.1 KiB
 qt5-filesystem              aarch64 0:5.15.18-2.fc44          fedora       0.0   B
 qt5-qtbase                  aarch64 0:5.15.18-2.fc44          fedora      10.3 MiB
 qt5-qtbase-common           noarch  0:5.15.18-2.fc44          fedora      78.0   B
 qt5-qtbase-devel            aarch64 0:5.15.18-2.fc44          fedora      19.1 MiB
 qt5-qtbase-gui              aarch64 0:5.15.18-2.fc44          fedora      21.1 MiB
 qt5-qtdeclarative           aarch64 0:5.15.18-2.fc44          fedora      16.0 MiB
 qt5-qtdeclarative-devel     aarch64 0:5.15.18-2.fc44          fedora       9.4 MiB
 qt5-qtlocation              aarch64 0:5.15.18-2.fc44          fedora      10.8 MiB
 qt5-qtsensors               aarch64 0:5.15.18-2.fc44          fedora       1.2 MiB
 qt5-qtwebchannel            aarch64 0:5.15.18-2.fc44          fedora     386.8 KiB
 qt5-qtwebkit                aarch64 0:5.212.0-0.98alpha4.fc44 fedora      41.5 MiB
 qt5-rpm-macros              noarch  0:5.15.18-2.fc44          fedora       1.6 KiB
 qt6-filesystem              aarch64 0:6.11.1-1.fc44           updates      0.0   B
 qt6-qtbase                  aarch64 0:6.11.1-1.fc44           updates     13.9 MiB
 qt6-qtbase-common           noarch  0:6.11.1-1.fc44           updates     76.0   B
 qt6-qtbase-devel            aarch64 0:6.11.1-1.fc44           updates     22.6 MiB
 qt6-qtbase-gui              aarch64 0:6.11.1-1.fc44           updates     27.5 MiB
 qt6-qtbase-ibase            aarch64 0:6.11.1-1.fc44           updates    150.5 KiB
 qt6-qtbase-mysql            aarch64 0:6.11.1-1.fc44           updates    150.3 KiB
 qt6-qtbase-odbc             aarch64 0:6.11.1-1.fc44           updates    149.9 KiB
 qt6-qtbase-postgresql       aarch64 0:6.11.1-1.fc44           updates    150.1 KiB
 qt6-qtdeclarative           aarch64 0:6.11.1-2.fc44           updates     61.9 MiB
 qt6-qtsvg                   aarch64 0:6.11.1-1.fc44           updates    951.8 KiB
 qt6-rpm-macros              noarch  0:6.11.1-1.fc44           updates      3.0 KiB
 rav1e-libs                  aarch64 0:0.8.1-3.fc44            fedora       2.1 MiB
 re2                         aarch64 2:20251105-4.fc44         fedora     598.8 KiB
 rhash                       aarch64 0:1.4.5-4.fc44            fedora     394.5 KiB
 sdl2-compat                 aarch64 0:2.32.68-1.fc44          updates    484.4 KiB
 shared-mime-info            aarch64 0:2.4-3.fc44              fedora       5.3 MiB
 snappy                      aarch64 0:1.2.2-4.fc44            fedora      83.6 KiB
 spirv-tools-libs            aarch64 0:2026.1-1.fc44           fedora       5.7 MiB
 sqlite                      aarch64 0:3.51.2-1.fc44           fedora       1.9 MiB
 svt-av1-libs                aarch64 0:3.1.2-2.fc44            fedora       3.4 MiB
 sysprof-capture-devel       aarch64 0:50.0-1.fc44             fedora     770.3 KiB
 tcl8                        aarch64 1:8.6.17-2.fc44           fedora       4.3 MiB
 thrift                      aarch64 0:0.20.0-9.fc44           fedora       4.8 MiB
 tk8                         aarch64 1:8.6.17-2.fc44           fedora       3.2 MiB
 tslib                       aarch64 0:1.24-2.fc44             fedora       1.7 MiB
 tzdata                      noarch  0:2026b-1.fc44            updates      1.2 MiB
 unixODBC                    aarch64 0:2.3.14-3.fc44           fedora       1.3 MiB
 uriparser                   aarch64 0:1.0.2-1.fc44            updates    240.3 KiB
 utf8proc                    aarch64 0:2.11.3-2.fc44           fedora     413.5 KiB
 vim-filesystem              noarch  2:9.2.597-1.fc44          updates     40.0   B
 viskores                    aarch64 0:1.1.0-3.fc44            copr_base  117.1 MiB
 viskores-devel              aarch64 0:1.1.0-3.fc44            copr_base   11.4 MiB
 vtk                         aarch64 0:9.6.2-11.fc44           copr_base  232.3 MiB
 vtk-qt                      aarch64 0:9.6.2-11.fc44           copr_base    1.6 MiB
 vulkan-headers              noarch  0:1.4.341.0-1.fc44        fedora      36.1 MiB
 vulkan-loader               aarch64 0:1.4.341.0-1.fc44        fedora     613.4 KiB
 vulkan-loader-devel         aarch64 0:1.4.341.0-1.fc44        fedora       8.0 KiB
 wayland-devel               aarch64 0:1.24.0-3.fc44           fedora     711.9 KiB
 woff2                       aarch64 0:1.0.2-25.fc44           fedora     204.8 KiB
 xcb-util                    aarch64 0:0.4.1-9.fc44            fedora      70.2 KiB
 xcb-util-cursor             aarch64 0:0.1.6-2.fc44            fedora      71.1 KiB
 xcb-util-image              aarch64 0:0.4.1-9.fc44            fedora      70.0 KiB
 xcb-util-keysyms            aarch64 0:0.4.1-9.fc44            fedora      68.5 KiB
 xcb-util-renderutil         aarch64 0:0.3.10-9.fc44           fedora      72.3 KiB
 xcb-util-wm                 aarch64 0:0.4.2-9.fc44            fedora     137.0 KiB
 xerces-c                    aarch64 0:3.3.0-9.fc44            fedora       3.8 MiB
 xkeyboard-config            noarch  0:2.47-1.fc44             fedora       6.4 MiB
 xml-common                  noarch  0:0.6.3-68.fc44           fedora      78.4 KiB
 xorg-x11-proto-devel        noarch  0:2025.1-2.fc44           fedora       1.8 MiB
 xprop                       aarch64 0:1.2.8-5.fc44            fedora      78.5 KiB
 xz-devel                    aarch64 1:5.8.2-2.fc44            fedora     258.8 KiB

Transaction Summary:
 Installing:       531 packages

Total size of inbound packages is 500 MiB. Need to download 500 MiB.
After this operation, 2 GiB extra will be used (install 2 GiB, remove 0 B).
[  1/531] boost-devel-0:1.90.0-7.fc44.a 100% |  43.6 MiB/s |  15.0 MiB |  00m00s
[  2/531] chrpath-0:0.16-28.fc44.aarch6 100% | 571.1 KiB/s |  29.7 KiB |  00m00s
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[  4/531] double-conversion-devel-0:3.4 100% | 687.0 KiB/s |  31.6 KiB |  00m00s
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[490/531] libwacom-data-0:2.19.0-1.fc44 100% |  37.6 MiB/s | 346.9 KiB |  00m00s
[491/531] kernel-headers-0:7.0.6-200.fc 100% |  71.1 MiB/s |   1.7 MiB |  00m00s
[492/531] libnghttp2-devel-0:1.68.0-4.f 100% |   2.3 MiB/s |  53.9 KiB |  00m00s
[493/531] libnghttp3-devel-0:1.16.0-1.f 100% | 833.0 KiB/s |  26.7 KiB |  00m00s
[494/531] ngtcp2-crypto-ossl-devel-0:1. 100% | 389.3 KiB/s |  11.3 KiB |  00m00s
[495/531] alsa-lib-0:1.2.16.1-1.fc44.aa 100% |  46.3 MiB/s | 521.6 KiB |  00m00s
[496/531] ngtcp2-devel-0:1.22.1-1.fc44. 100% |   1.9 MiB/s |  48.3 KiB |  00m00s
[497/531] libXi-0:1.8.3-1.fc44.aarch64  100% |   1.8 MiB/s |  39.7 KiB |  00m00s
[498/531] libmount-devel-0:2.41.4-8.fc4 100% |   3.0 MiB/s |  24.8 KiB |  00m00s
[499/531] llvm-libs-0:22.1.7-1.fc44.aar 100% | 204.7 MiB/s |  32.8 MiB |  00m00s
[500/531] giflib-0:6.1.3-2.fc44.aarch64 100% |   1.6 MiB/s |  54.3 KiB |  00m00s
[501/531] libkml-0:1.3.0-58.fc44.aarch6 100% |   9.6 MiB/s | 333.9 KiB |  00m00s
[502/531] libxcrypt-devel-0:4.5.2-3.fc4 100% |   4.9 MiB/s |  30.0 KiB |  00m00s
[503/531] libmpc-0:1.4.1-1.fc44.aarch64 100% |   9.0 MiB/s |  73.7 KiB |  00m00s
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[505/531] libasan-0:16.1.1-2.fc44.aarch 100% |  49.9 MiB/s | 510.5 KiB |  00m00s
[506/531] perl-FileHandle-0:2.05-524.fc 100% |   2.1 MiB/s |  15.3 KiB |  00m00s
[507/531] at-spi2-atk-0:2.60.4-1.fc44.a 100% |  12.1 MiB/s |  86.6 KiB |  00m00s
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[509/531] at-spi2-core-0:2.60.4-1.fc44. 100% |  43.2 MiB/s | 397.9 KiB |  00m00s
[510/531] dbus-1:1.16.2-1.fc44.aarch64  100% |   1.2 MiB/s |   7.4 KiB |  00m00s
[511/531] libXtst-0:1.2.5-4.fc44.aarch6 100% |   4.0 MiB/s |  20.7 KiB |  00m00s
[512/531] glibc-devel-0:2.43-6.fc44.aar 100% |  13.8 MiB/s | 608.3 KiB |  00m00s
[513/531] xprop-0:1.2.8-5.fc44.aarch64  100% |   5.7 MiB/s |  34.9 KiB |  00m00s
[514/531] avahi-glib-0:0.9~rc2-8.fc44.a 100% |   2.9 MiB/s |  15.1 KiB |  00m00s
[515/531] libstemmer-0:3.0.1-11.fc44.aa 100% |  23.9 MiB/s | 147.1 KiB |  00m00s
[516/531] glib-networking-0:2.80.1-4.fc 100% |  32.7 MiB/s | 201.1 KiB |  00m00s
[517/531] libsoup3-0:3.6.6-8.fc44.aarch 100% |  27.5 MiB/s | 393.8 KiB |  00m00s
[518/531] libblkid-devel-0:2.41.4-8.fc4 100% |   3.3 MiB/s |  23.6 KiB |  00m00s
[519/531] libtinysparql-0:3.11.1-1.fc44 100% |  11.5 MiB/s | 340.5 KiB |  00m00s
[520/531] uriparser-0:1.0.2-1.fc44.aarc 100% |   7.6 MiB/s |  69.8 KiB |  00m00s
[521/531] hdf-libs-0:4.3.0-5.fc44.aarch 100% |  38.7 MiB/s | 277.7 KiB |  00m00s
[522/531] gsettings-desktop-schemas-0:5 100% |  76.7 MiB/s | 864.3 KiB |  00m00s
[523/531] cmake-rpm-macros-0:4.3.0-1.fc 100% |   2.2 MiB/s |  13.8 KiB |  00m00s
[524/531] gcc-plugin-annobin-0:16.1.1-2 100% |   7.4 MiB/s |  53.1 KiB |  00m00s
[525/531] python-rpm-macros-0:3.14-12.f 100% |   3.2 MiB/s |  20.0 KiB |  00m00s
[526/531] python3-rpm-generators-0:14-1 100% |   4.7 MiB/s |  28.6 KiB |  00m00s
[527/531] libtirpc-0:1.3.7-2.fc44.aarch 100% |   3.6 MiB/s |  93.3 KiB |  00m00s
[528/531] python3-rpm-macros-0:3.14-12. 100% |   2.0 MiB/s |  12.4 KiB |  00m00s
[529/531] annobin-plugin-gcc-0:13.14-1. 100% |  66.8 MiB/s | 684.0 KiB |  00m00s
[530/531] pyproject-rpm-macros-0:1.22.2 100% |   2.1 MiB/s |  53.2 KiB |  00m00s
[531/531] annobin-docs-0:13.14-1.fc44.n 100% |  12.1 MiB/s |  86.7 KiB |  00m00s
--------------------------------------------------------------------------------
[531/531] Total                         100% |  57.7 MiB/s | 499.6 MiB |  00m09s
Running transaction
[  1/533] Verify package files          100% | 321.0   B/s | 531.0   B |  00m02s
>>> Running %pretrans scriptlet: xkeyboard-config-0:2.47-1.fc44.noarch
>>> Finished %pretrans scriptlet: xkeyboard-config-0:2.47-1.fc44.noarch
>>> [RPM] /var/lib/mock/fedora-44-aarch64-1781709347.325201/root/var/cache/dnf/copr_base-574a4a8a6151b369/packages/vtk-devel-9.6.2-11.fc44.aarch64.rpm: Header OpenPGP V4 RSA/SHA256 signature, key ID 1f7bb92a11e0defb: NOKEY
[  2/533] Prepare transaction           100% |   1.0 KiB/s | 531.0   B |  00m01s
[  3/533] Installing glib2-0:2.88.1-1.f 100% | 240.0 MiB/s |  15.8 MiB |  00m00s
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[  9/533] Installing expat-0:2.8.1-1.fc 100% |  20.3 MiB/s | 373.6 KiB |  00m00s
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[ 13/533] Installing libgfortran-0:16.1 100% | 342.3 MiB/s |   1.7 MiB |  00m00s
[ 14/533] Installing boost-chrono-0:1.9 100% |  68.6 MiB/s |  70.3 KiB |  00m00s
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[ 16/533] Installing libwayland-client- 100% |  69.4 MiB/s |  71.1 KiB |  00m00s
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[ 19/533] Installing nspr-0:4.39-1.fc44 100% | 205.7 MiB/s | 421.2 KiB |  00m00s
[ 20/533] Installing dbus-libs-1:1.16.2 100% | 194.6 MiB/s | 398.6 KiB |  00m00s
[ 21/533] Installing openjpeg-0:2.5.4-3 100% | 202.2 MiB/s | 414.2 KiB |  00m00s
[ 22/533] Installing libwayland-cursor- 100% |  80.4 MiB/s |  82.4 KiB |  00m00s
[ 23/533] Installing boost-filesystem-0 100% | 195.2 MiB/s | 199.9 KiB |  00m00s
[ 24/533] Installing boost-regex-0:1.90 100% | 130.3 MiB/s | 266.9 KiB |  00m00s
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[ 26/533] Installing openssl-devel-1:3. 100% |  46.6 MiB/s |   5.5 MiB |  00m00s
[ 27/533] Installing lcms2-0:2.16-7.fc4 100% | 158.3 MiB/s | 486.3 KiB |  00m00s
[ 28/533] Installing libarrow-doc-0:23. 100% | 117.1 MiB/s | 119.9 KiB |  00m00s
[ 29/533] Installing libglvnd-1:1.7.0-9 100% | 443.4 MiB/s |   1.3 MiB |  00m00s
[ 30/533] Installing libwebp-0:1.6.0-3. 100% | 200.4 MiB/s | 820.9 KiB |  00m00s
[ 31/533] Installing libICE-0:1.1.2-4.f 100% | 218.4 MiB/s | 223.6 KiB |  00m00s
[ 32/533] Installing libaec-0:1.1.5-1.f 100% |  76.5 MiB/s | 156.7 KiB |  00m00s
[ 33/533] Installing hdf5-0:1.14.6-7.fc 100% | 184.5 MiB/s |   7.0 MiB |  00m00s
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[ 36/533] Installing libSM-0:1.2.5-4.fc 100% | 127.2 MiB/s | 130.3 KiB |  00m00s
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[ 38/533] Installing nss-util-0:3.124.0 100% | 212.7 MiB/s | 217.8 KiB |  00m00s
[ 39/533] Installing libmpc-0:1.4.1-1.f 100% | 213.4 MiB/s | 218.5 KiB |  00m00s
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[ 41/533] Installing pcre2-utf16-0:10.4 100% | 285.0 MiB/s | 583.8 KiB |  00m00s
[ 42/533] Installing libtheora-1:1.1.1- 100% | 229.9 MiB/s | 470.8 KiB |  00m00s
[ 43/533] Installing boost-graph-0:1.90 100% | 163.3 MiB/s | 334.5 KiB |  00m00s
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[ 46/533] Installing shared-mime-info-0 100% |  87.9 MiB/s |   2.6 MiB |  00m00s
[ 47/533] Installing python-rpm-macros- 100% |  28.2 MiB/s |  28.9 KiB |  00m00s
[ 48/533] Installing fonts-filesystem-1 100% |   0.0   B/s | 788.0   B |  00m00s
[ 49/533] Installing snappy-0:1.2.2-4.f 100% |  83.2 MiB/s |  85.2 KiB |  00m00s
[ 50/533] Installing geos-0:3.14.1-2.fc 100% | 141.3 MiB/s |   4.0 MiB |  00m00s
[ 51/533] Installing liblerc-0:4.0.0-10 100% | 178.3 MiB/s | 547.8 KiB |  00m00s
[ 52/533] Installing boost-serializatio 100% | 228.8 MiB/s | 468.6 KiB |  00m00s
[ 53/533] Installing boost-random-0:1.9 100% |  22.9 MiB/s |  70.4 KiB |  00m00s
[ 54/533] Installing libstdc++-devel-0: 100% | 374.8 MiB/s |  40.5 MiB |  00m00s
[ 55/533] Installing libpq-0:18.0-4.fc4 100% | 205.5 MiB/s |   1.0 MiB |  00m00s
[ 56/533] Installing fmt-0:11.2.0-4.fc4 100% | 128.8 MiB/s | 263.9 KiB |  00m00s
[ 57/533] Installing double-conversion- 100% | 139.5 MiB/s | 142.8 KiB |  00m00s
[ 58/533] Installing jsoncpp-0:1.9.6-3. 100% | 133.4 MiB/s | 273.3 KiB |  00m00s
[ 59/533] Installing blosc-0:1.21.6-10. 100% | 129.5 MiB/s | 132.6 KiB |  00m00s
[ 60/533] Installing python3-rpm-macros 100% |   0.0   B/s |   6.8 KiB |  00m00s
[ 61/533] Installing mesa-libGLU-0:9.0. 100% | 161.3 MiB/s | 330.3 KiB |  00m00s
[ 62/533] Installing libICE-devel-0:1.1 100% | 257.2 MiB/s | 263.4 KiB |  00m00s
[ 63/533] Installing boost-program-opti 100% | 130.9 MiB/s | 268.2 KiB |  00m00s
[ 64/533] Installing libicu-devel-0:77. 100% | 142.7 MiB/s |   5.1 MiB |  00m00s
[ 65/533] Installing libharu-0:2.4.5-2. 100% | 195.7 MiB/s |   1.8 MiB |  00m00s
[ 66/533] Installing libgudev-0:238-9.f 100% | 102.7 MiB/s | 105.2 KiB |  00m00s
[ 67/533] Installing json-glib-0:1.10.8 100% |  87.7 MiB/s | 628.3 KiB |  00m00s
[ 68/533] Installing ngtcp2-devel-0:1.2 100% |  64.5 MiB/s | 264.1 KiB |  00m00s
[ 69/533] Installing kernel-headers-0:7 100% | 131.2 MiB/s |   7.0 MiB |  00m00s
[ 70/533] Installing glibc-devel-0:2.43 100% | 107.1 MiB/s |   2.4 MiB |  00m00s
[ 71/533] Installing libxcrypt-devel-0: 100% |  32.5 MiB/s |  33.3 KiB |  00m00s
[ 72/533] Installing libtextstyle-0:0.2 100% | 194.6 MiB/s | 398.4 KiB |  00m00s
[ 73/533] Installing gettext-libs-0:0.2 100% | 301.5 MiB/s |   2.4 MiB |  00m00s
[ 74/533] Installing vim-filesystem-2:9 100% |   4.7 MiB/s |   4.8 KiB |  00m00s
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[ 76/533] Installing graphite2-0:1.3.14 100% |  13.1 MiB/s | 241.5 KiB |  00m00s
[ 77/533] Installing freetype-0:2.14.3- 100% | 214.9 MiB/s | 880.3 KiB |  00m00s
[ 78/533] Installing harfbuzz-0:14.1.0- 100% | 267.3 MiB/s |   2.7 MiB |  00m00s
[ 79/533] Installing fribidi-0:1.0.16-4 100% |  13.5 MiB/s | 248.5 KiB |  00m00s
[ 80/533] Installing libffi-devel-0:3.5 100% |  31.3 MiB/s |  32.1 KiB |  00m00s
[ 81/533] Installing libdav1d-0:1.5.3-1 100% | 279.2 MiB/s | 857.8 KiB |  00m00s
[ 82/533] Installing openblas-0:0.3.29- 100% | 110.8 MiB/s | 113.5 KiB |  00m00s
[ 83/533] Installing libseccomp-0:2.6.0 100% |  40.2 MiB/s | 246.7 KiB |  00m00s
[ 84/533] Installing xml-common-0:0.6.3 100% |  79.2 MiB/s |  81.1 KiB |  00m00s
[ 85/533] Installing mtdev-0:1.1.6-12.f 100% |  68.7 MiB/s |  70.3 KiB |  00m00s
[ 86/533] Installing pixman-0:0.46.2-3. 100% | 320.0 MiB/s | 655.4 KiB |  00m00s
[ 87/533] Installing lzo-0:2.10-16.fc44 100% | 160.6 MiB/s | 164.4 KiB |  00m00s
[ 88/533] Installing minizip-ng-compat- 100% | 194.6 MiB/s | 199.3 KiB |  00m00s
[ 89/533] Installing freexl-0:2.0.0-20. 100% |  92.2 MiB/s |  94.4 KiB |  00m00s
[ 90/533] Installing libXau-0:1.0.12-4. 100% | 119.5 MiB/s | 122.3 KiB |  00m00s
[ 91/533] Installing libxcb-0:1.17.0-7. 100% | 270.4 MiB/s |   2.2 MiB |  00m00s
[ 92/533] Installing xcb-util-renderuti 100% |  72.0 MiB/s |  73.7 KiB |  00m00s
[ 93/533] Installing xcb-util-keysyms-0 100% |  68.0 MiB/s |  69.6 KiB |  00m00s
[ 94/533] Installing xcb-util-wm-0:0.4. 100% | 135.8 MiB/s | 139.0 KiB |  00m00s
[ 95/533] Installing viskores-0:1.1.0-3 100% | 511.3 MiB/s | 117.1 MiB |  00m00s
[ 96/533] Installing libdicom-0:1.2.0-3 100% | 253.5 MiB/s | 519.1 KiB |  00m00s
[ 97/533] Installing unixODBC-0:2.3.14- 100% |  55.8 MiB/s |   1.3 MiB |  00m00s
[ 98/533] Installing libdeflate-0:1.25- 100% | 160.5 MiB/s | 164.4 KiB |  00m00s
[ 99/533] Installing imath-0:3.1.12-6.f 100% | 190.3 MiB/s | 389.7 KiB |  00m00s
[100/533] Installing emacs-filesystem-1 100% | 793.0 KiB/s | 812.0   B |  00m00s
[101/533] Installing tcl8-1:8.6.17-2.fc 100% | 119.3 MiB/s |   4.3 MiB |  00m00s
[102/533] Installing boost-charconv-0:1 100% | 193.9 MiB/s | 198.6 KiB |  00m00s
[103/533] Installing pugixml-0:1.15-2.f 100% | 130.2 MiB/s | 266.6 KiB |  00m00s
[104/533] Installing xz-devel-1:5.8.2-2 100% | 128.2 MiB/s | 262.6 KiB |  00m00s
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[108/533] Installing boost-locale-0:1.9 100% | 215.1 MiB/s | 660.7 KiB |  00m00s
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[116/533] Installing pixman-devel-0:0.4 100% |  18.5 MiB/s |  56.9 KiB |  00m00s
[117/533] Installing iso-codes-0:4.20.1 100% | 239.7 MiB/s |  22.5 MiB |  00m00s
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[126/533] Installing arpack-0:3.9.1-9.f 100% | 180.9 MiB/s | 555.7 KiB |  00m00s
[127/533] Installing armadillo-0:12.8.1 100% | 143.8 MiB/s | 147.2 KiB |  00m00s
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[129/533] Installing harfbuzz-icu-0:14. 100% |  66.6 MiB/s |  68.2 KiB |  00m00s
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[524/533] Installing lz4-devel-0:1.10.0 100% |   6.7 MiB/s | 103.2 KiB |  00m00s
[525/533] Installing vtk-devel-0:9.6.2- 100% | 142.7 MiB/s |  32.7 MiB |  00m00s
[526/533] Installing qt5-qtwebkit-devel 100% |  42.4 MiB/s | 217.0 KiB |  00m00s
[527/533] Installing mariadb-connector- 100% |  13.6 MiB/s | 250.5 KiB |  00m00s
[528/533] Installing gcc-plugin-annobin 100% |   4.9 MiB/s |  70.7 KiB |  00m00s
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[531/533] Installing swig-0:4.4.1-4.fc4 100% | 103.6 MiB/s |   6.1 MiB |  00m00s
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Warning: skipped OpenPGP checks for 6 packages from repository: copr_base
Complete!
Building target platforms: aarch64
Building for target aarch64
setting SOURCE_DATE_EPOCH=1781481600
Wrote: /builddir/build/SRPMS/compucell3d-4.9.0-0.1.rc.20260615git780374e.fc44.src.rpm
Updating and loading repositories:
 updates                                100% |   5.9 KiB/s |  10.8 KiB |  00m02s
 fedora                                 100% |   8.8 KiB/s |  13.0 KiB |  00m01s
 Copr repository                        100% |   1.1 KiB/s |   1.5 KiB |  00m01s
Repositories loaded.
Package "PEGTL-devel-2.8.3-15.fc44.aarch64" is already installed.
Package "boost-devel-1.90.0-7.fc44.aarch64" is already installed.
Package "cgnslib-devel-4.5.1-3.fc44.aarch64" is already installed.
Package "chrpath-0.16-28.fc44.aarch64" is already installed.
Package "cmake-4.3.0-1.fc44.aarch64" is already installed.
Package "double-conversion-devel-3.4.0-3.fc44.aarch64" is already installed.
Package "expat-devel-2.8.1-1.fc44.aarch64" is already installed.
Package "fmt-devel-11.2.0-4.fc44.aarch64" is already installed.
Package "freetype-devel-2.14.3-1.fc44.aarch64" is already installed.
Package "gcc-c++-16.1.1-2.fc44.aarch64" is already installed.
Package "gdal-devel-3.12.4-1.fc44.aarch64" is already installed.
Package "glew-devel-2.2.0-12.fc44.aarch64" is already installed.
Package "hdf5-devel-1.14.6-7.fc44.aarch64" is already installed.
Package "jsoncpp-devel-1.9.6-3.fc44.aarch64" is already installed.
Package "mesa-libGL-devel-26.0.8-1.fc44.aarch64" is already installed.
Nothing to do.
Package "libX11-devel-1.8.13-1.fc44.aarch64" is already installed.
Package "libXcursor-devel-1.2.3-4.fc44.aarch64" is already installed.
Package "libXext-devel-1.3.6-5.fc44.aarch64" is already installed.
Package "libXt-devel-1.3.1-4.fc44.aarch64" is already installed.
Package "libarchive-devel-3.8.7-1.fc44.aarch64" is already installed.
Package "libharu-devel-2.4.5-2.fc44.aarch64" is already installed.
Package "libjpeg-turbo-devel-3.1.3-1.fc44.aarch64" is already installed.
Package "libogg-devel-2:1.3.6-2.fc44.aarch64" is already installed.
Package "libpng-devel-2:1.6.58-1.fc44.aarch64" is already installed.
Package "libpq-devel-18.0-4.fc44.aarch64" is already installed.
Package "libtheora-devel-1:1.1.1-41.fc44.aarch64" is already installed.
Package "libtiff-devel-4.7.1-2.fc44.aarch64" is already installed.
Package "libxml2-devel-2.12.10-6.fc44.aarch64" is already installed.
Package "lz4-devel-1.10.0-4.fc44.aarch64" is already installed.
Package "mariadb-connector-c-devel-3.4.8-3.fc44.aarch64" is already installed.
Package "netcdf-cxx-devel-4.2-43.fc44.aarch64" is already installed.
Package "ninja-build-1.13.2-2.fc44.aarch64" is already installed.
Package "json-devel-3.12.0-2.fc44.aarch64" is already installed.
Package "openslide-devel-4.0.0-14.fc44.aarch64" is already installed.
Package "patchelf-0.18.0-9.fc43.aarch64" is already installed.
Package "proj-devel-9.8.1-1.fc44.aarch64" is already installed.
Package "pugixml-devel-1.15-2.fc44.aarch64" is already installed.
Package "python3-devel-3.14.5-1.fc44.aarch64" is already installed.
Package "python3-numpy-1:2.4.6-1.fc44.aarch64" is already installed.
Package "qt5-qtwebkit-devel-5.212.0-0.98alpha4.fc44.aarch64" is already installed.
Package "qt6-qtdeclarative-devel-6.11.1-2.fc44.aarch64" is already installed.
Package "sqlite-devel-3.51.2-1.fc44.aarch64" is already installed.
Package "swig-4.4.1-4.fc44.aarch64" is already installed.
Package "utf8cpp-devel-4.1.0-1.fc44.noarch" is already installed.
Package "vtk-devel-9.6.2-11.fc44.aarch64" is already installed.
Package "zlib-ng-compat-devel-2.3.3-3.fc44.aarch64" is already installed.

Finish: build setup for compucell3d-4.9.0-0.1.rc.20260615git780374e.fc44.src.rpm
Start: rpmbuild compucell3d-4.9.0-0.1.rc.20260615git780374e.fc44.src.rpm
Building target platforms: aarch64
Building for target aarch64
setting SOURCE_DATE_EPOCH=1781481600
Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.5kITgd
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.ajpzp3
+ umask 022
+ cd /builddir/build/BUILD/compucell3d-4.9.0-build
+ cd /builddir/build/BUILD/compucell3d-4.9.0-build
+ rm -rf CompuCell3D-780374e5e17145de12452aeabd224710134fa53f
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd CompuCell3D-780374e5e17145de12452aeabd224710134fa53f
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ sed -i 's/set(CMAKE_CXX_STANDARD 11)/set(CMAKE_CXX_STANDARD 17)/' CompuCell3D/CMakeLists.txt
+ sed -i 's/SET(CMAKE_CXX_STANDARD 11)/SET(CMAKE_CXX_STANDARD 17)/' CompuCell3D/DeveloperZone/CMakeLists.txt
+ sed -i 's/^SET(USE_LIBRARY_VERSIONS OFF)/SET(USE_LIBRARY_VERSIONS ON)/' CompuCell3D/CMakeLists.txt
+ sed -i 's/SET(COMPUCELL3D_LIBRARY_PROPERTIES ${COMPUCELL3D_LIBRARY_PROPERTIES} VERSION "" SOVERSION "")/SET(COMPUCELL3D_LIBRARY_PROPERTIES ${COMPUCELL3D_LIBRARY_PROPERTIES} VERSION "4.9.0" SOVERSION "4.9")/' CompuCell3D/CMakeLists.txt
+ for _target in FieldExtractor PyPlugin SerializerDE
++ grep -rl 'ADD_LIBRARY(FieldExtractor' CompuCell3D/core/pyinterface/
+ _cmfiles=CompuCell3D/core/pyinterface/PlayerPythonNew/CMakeLists.txt
+ for _cmf in ${_cmfiles}
+ printf '\nset_target_properties(%s PROPERTIES VERSION "4.9.0" SOVERSION "4.9")\n' FieldExtractor
+ for _target in FieldExtractor PyPlugin SerializerDE
++ grep -rl 'ADD_LIBRARY(PyPlugin' CompuCell3D/core/pyinterface/
+ _cmfiles=CompuCell3D/core/pyinterface/PyPlugin/CMakeLists.txt
+ for _cmf in ${_cmfiles}
+ printf '\nset_target_properties(%s PROPERTIES VERSION "4.9.0" SOVERSION "4.9")\n' PyPlugin
+ for _target in FieldExtractor PyPlugin SerializerDE
++ grep -rl 'ADD_LIBRARY(SerializerDE' CompuCell3D/core/pyinterface/
+ _cmfiles=CompuCell3D/core/pyinterface/SerializerDE/CMakeLists.txt
+ for _cmf in ${_cmfiles}
+ printf '\nset_target_properties(%s PROPERTIES VERSION "4.9.0" SOVERSION "4.9")\n' SerializerDE
+ sed -i 's|SET(COMPUCELL3D_LIBRARY_DESTINATION lib)|SET(COMPUCELL3D_LIBRARY_DESTINATION ${CMAKE_INSTALL_LIBDIR})|g' CompuCell3D/CMakeLists.txt
+ sed -i 's|SET(COMPUCELL3D_ARCHIVE_DESTINATION lib)|SET(COMPUCELL3D_ARCHIVE_DESTINATION ${CMAKE_INSTALL_LIBDIR})|g' CompuCell3D/CMakeLists.txt
+ sed -i 's|SET(COMPUCELL3D_INSTALL_CONFIG_DIR lib/cmake/CompuCell3D)|SET(COMPUCELL3D_INSTALL_CONFIG_DIR ${CMAKE_INSTALL_LIBDIR}/cmake/CompuCell3D)|' CompuCell3D/CMakeLists.txt
+ sed -i 's|LIBRARY DESTINATION lib$|LIBRARY DESTINATION ${CMAKE_INSTALL_LIBDIR}|' CompuCell3D/compucell3d_cmake_macros.cmake
+ sed -i 's|ARCHIVE DESTINATION lib$|ARCHIVE DESTINATION ${CMAKE_INSTALL_LIBDIR}|' CompuCell3D/compucell3d_cmake_macros.cmake
+ sed -i '/install(FILES/,/DESTINATION/{s|DESTINATION\n.*${CMAKE_INSTALL_PREFIX}|DESTINATION .|;}' CompuCell3D/CMakeLists.txt
+ sed -i '/^install(FILES/,/^)/d' CompuCell3D/CMakeLists.txt
+ sed -i 's/ stdc++fs//' CompuCell3D/core/PublicUtilities/CMakeLists.txt
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.XjobdN
+ umask 022
+ cd /builddir/build/BUILD/compucell3d-4.9.0-build
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  '
+ export LDFLAGS
~/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D ~/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd CompuCell3D-780374e5e17145de12452aeabd224710134fa53f
+ export 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive'
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive'
+ export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -Wno-error=implicit-function-declaration -Wno-error=int-conversion -Wno-error=incompatible-pointer-types'
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -Wno-error=implicit-function-declaration -Wno-error=int-conversion -Wno-error=incompatible-pointer-types'
+ pushd CompuCell3D
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -Wno-error=implicit-function-declaration -Wno-error=int-conversion -Wno-error=incompatible-pointer-types'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ /usr/bin/cmake -S . -B redhat-linux-build -G Ninja -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DCMAKE_INSTALL_FULL_SBINDIR:PATH=/usr/bin -DCMAKE_INSTALL_SBINDIR:PATH=bin -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -GNinja -DCMAKE_BUILD_TYPE=Release -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_STANDALONE:BOOL=OFF -DANACONDA_PYTHON_LAYOUT:BOOL=OFF -DBUILD_PYINTERFACE:BOOL=ON -DBUILD_QT_WRAPPERS:BOOL=OFF -DBUILD_CPP_ONLY_EXECUTABLE:BOOL=OFF -DUSE_DOLFIN:BOOL=OFF -DNO_OPENCL:BOOL=ON -DUSE_LIBRARY_VERSIONS:BOOL=ON -DCOMPUCELL3D_TEST:BOOL=OFF -DCMAKE_INSTALL_LIBDIR:PATH=lib64 -DCMAKE_SKIP_INSTALL_RPATH:BOOL=ON -DCMAKE_CXX_STANDARD:STRING=17 -DCMAKE_CXX_STANDARD_REQUIRED:BOOL=ON
-- The C compiler identification is GNU 16.1.1
-- The CXX compiler identification is GNU 16.1.1
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found OpenMP_C: -fopenmp (found version "5.2")
-- Found OpenMP_CXX: -fopenmp (found version "5.2")
-- Found OpenMP: TRUE (found version "5.2")
openmp c flags -fopenmp
openmp cxx flags -fopenmp
-- Found Python3: /usr/bin/python3.14 (found version "3.14.5") found components: Interpreter Development NumPy Development.Module Development.Embed
Python3_FOUND: TRUE
Python3_Interpreter_FOUND: TRUE
Python3_VERSION: 3.14.5
Python3_Development_FOUND: TRUE
Python3_EXECUTABLE: /usr/bin/python3.14
Python3_Development_FOUND: TRUE
Python3_INCLUDE_DIRS: /usr/include/python3.14
Python3_LIBRARIES: /usr/lib64/libpython3.14.so
Python3_LIBRARY_RELEASE: /usr/lib64/libpython3.14.so
Python3_LIBRARY_DIRS: /usr/lib64
Python3_RUNTIME_LIBRARY_DIRS: /usr/lib64
Python3_NumPy_INCLUDE_DIRS: /usr/lib64/python3.14/site-packages/numpy/_core/include
Python3_LIBRARY_DIRS /usr/lib64
Python3_SABI_LIBRARY_DIRS 
Python3_SITEARCH /usr/lib64/python3.14/site-packages
PYTHON_BASE_DIR/usr
 THIS IS COMPUCELL3D_BUILD_VERSION 0
COMPUCELL3D_C_BUILD_VERSION is 0
GOT VERSION AS 4.9.0
Generated /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/cc3d/_version.py
Version: 4.9.0
Revision: 20260214
Build number: 0
Git hash: unknown
-- Generated cc3d/_version.py with git hash 4.9.0
-- Found ZLIB: /usr/lib64/libz.so (found version "1.3.1")
 PUBLIC UTILS OPEN MP FLAG-fopenmp
expat library local /usr/lib64/libexpat.so
-- /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D
CMake Warning (dev) at core/CompuCell3D/steppables/PDESolvers/FindEigen3.cmake:73:
  Syntax Warning in cmake code at column 35

  Argument not separated from preceding token by whitespace.
Call Stack (most recent call first):
  core/CompuCell3D/steppables/PDESolvers/CMakeLists.txt:15 (find_package)
This warning is for project developers.  Use -Wno-dev to suppress it.

OSX LOOKING FOR PATH,/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen
'LOCATEDEIGENAT',/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen
-- Found Eigen3: /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen (Required is at least version "2.91.0")
-- OpenCL disabled
OPENMP FLAGS -fopenmp
-- Found SWIG: /usr/bin/swig (found version "4.4.1")
CMake Deprecation Warning at /usr/share/cmake/Modules/UseSWIG.cmake:1110 (message):
  SWIG_LINK_LIBRARIES is deprecated.  Use TARGET_LINK_LIBRARIES instead.
Call Stack (most recent call first):
  core/pyinterface/CC3DXML/CMakeLists.txt:26 (SWIG_LINK_LIBRARIES)


CMake Deprecation Warning at /usr/share/cmake/Modules/UseSWIG.cmake:1110 (message):
  SWIG_LINK_LIBRARIES is deprecated.  Use TARGET_LINK_LIBRARIES instead.
Call Stack (most recent call first):
  core/pyinterface/CompuCellPython/CMakeLists.txt:106 (SWIG_LINK_LIBRARIES)


-- Found Python3: /usr/bin/python3.14 (found suitable version "3.14.5", minimum required is "3.14") found components: Interpreter Development.Module Development.Embed
-- Found nlohmann_json: /usr/share/cmake/nlohmann_json/nlohmann_jsonConfig.cmake (found version "3.12.0")
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE
-- Performing Test HAVE_STDATOMIC
-- Performing Test HAVE_STDATOMIC - Success
-- Found WrapAtomic: TRUE
-- Found OpenGL: /usr/lib64/libOpenGL.so
-- Found WrapOpenGL: TRUE
-- Found WrapVulkanHeaders: /usr/include
-- Found LibXml2: /usr/lib64/libxml2.so (found version "2.12.10")
-- Found HDF5: /usr/lib64/libhdf5.so (found version "1.14.6") found components: C HL
-- Found utf8cpp: /usr/include/utf8cpp
-- Found NetCDF: netcdf (found version "4.9.3")
-- Found THEORA: /usr/lib64/libtheora.so
-- Found OGG: /usr/lib64/libogg.so
-- Found JsonCpp: /usr/lib64/libjsoncpp.so (found suitable version "1.9.6", minimum required is "0.7.0")
-- Found PEGTL: /usr/include/tao (found suitable version "2.8.3", minimum required is "2.0.0")
-- Found LibHaru: /usr/lib64/libhpdf.so (found suitable version "2.4.5", minimum required is "2.3.0")
-- Found PNG: /usr/lib64/libpng.so (found version "1.6.58")
-- Found LibPROJ: /usr/lib64/libproj.so (found version "9.8.1")
-- Found SQLite3: /usr/lib64/libsqlite3.so (found version "3.51.2")
-- Found X11: /usr/include
-- Looking for XOpenDisplay in /usr/lib64/libX11.so;/usr/lib64/libXext.so
-- Looking for XOpenDisplay in /usr/lib64/libX11.so;/usr/lib64/libXext.so - found
-- Looking for gethostbyname
-- Looking for gethostbyname - found
-- Looking for connect
-- Looking for connect - found
-- Looking for remove
-- Looking for remove - found
-- Looking for shmat
-- Looking for shmat - found
-- Looking for IceConnectionNumber in ICE
-- Looking for IceConnectionNumber in ICE - found
-- Found EXPAT: /usr/lib64/libexpat.so (found suitable version "2.8.1", minimum required is "2.2.1")
-- Found JPEG: /usr/lib64/libjpeg.so (found version "62")
-- Found TIFF: /usr/lib64/libtiff.so (found version "4.7.1")
-- Found LZ4: /usr/lib64/liblz4.so (found version "1.10.0")
-- Found LZMA: /usr/lib64/liblzma.so (found version "5.8.2")
-- Could NOT find freetype (missing: freetype_DIR)
-- Found Freetype: /usr/lib64/libfreetype.so (found version "2.14.3")
-- Found OpenMP_C: -fopenmp (found version "5.2")
-- Found OpenMP_CXX: -fopenmp (found version "5.2")
VTK_MAJOR_VERSION=9
NUMPY_INCLUDE_DIR
VTK_LIB_DIRS 
CMake Deprecation Warning at /usr/share/cmake/Modules/UseSWIG.cmake:1110 (message):
  SWIG_LINK_LIBRARIES is deprecated.  Use TARGET_LINK_LIBRARIES instead.
Call Stack (most recent call first):
  core/pyinterface/PlayerPythonNew/CMakeLists.txt:120 (SWIG_LINK_LIBRARIES)


CMake Deprecation Warning at /usr/share/cmake/Modules/UseSWIG.cmake:1110 (message):
  SWIG_LINK_LIBRARIES is deprecated.  Use TARGET_LINK_LIBRARIES instead.
Call Stack (most recent call first):
  core/pyinterface/SerializerDE/CMakeLists.txt:79 (SWIG_LINK_LIBRARIES)


CMake Deprecation Warning at /usr/share/cmake/Modules/UseSWIG.cmake:1110 (message):
  SWIG_LINK_LIBRARIES is deprecated.  Use TARGET_LINK_LIBRARIES instead.
Call Stack (most recent call first):
  core/pyinterface/CC3DAuxFields/CMakeLists.txt:36 (SWIG_LINK_LIBRARIES)


THIS IS cc3d_py_source_dir: /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/../cc3d
USING EXTERNAL PYTHON
-- Configuring done (5.2s)
CMake Warning (dev) at compucell3d_cmake_macros.cmake:200 (ADD_LIBRARY):
  Policy CMP0115 is not set: Source file extensions must be explicit.  Run
  "cmake --help-policy CMP0115" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.

  File:

    /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/hpppdesolvers.h
Call Stack (most recent call first):
  core/CompuCell3D/steppables/PDESolvers/CMakeLists.txt:187 (ADD_COMPUCELL3D_STEPPABLE)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Generating done (0.2s)
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_Fortran_FLAGS_RELEASE
    CMAKE_INSTALL_DO_STRIP
    CMAKE_VERBOSE_MAKEFILE
    INCLUDE_INSTALL_DIR
    LIB_INSTALL_DIR
    LIB_SUFFIX
    SHARE_INSTALL_PREFIX
    SYSCONF_INSTALL_DIR


-- Build files have been written to: /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build
+ /usr/bin/cmake --build redhat-linux-build -j4 --verbose
Change Dir: '/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build'

Run Build Command(s): /usr/bin/ninja-build -v -j 4
[1/395] /usr/bin/g++ -DField3DShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/Field3DChangeWatcher.cpp.o -MF core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/Field3DChangeWatcher.cpp.o.d -o core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/Field3DChangeWatcher.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DChangeWatcher.cpp
[2/395] /usr/bin/g++ -DField3DShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/Field3DIndex.cpp.o -MF core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/Field3DIndex.cpp.o.d -o core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/Field3DIndex.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DIndex.cpp
[3/395] /usr/bin/g++ -DField3DShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/Point3D.cpp.o -MF core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/Point3D.cpp.o.d -o core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/Point3D.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Point3D.cpp
[4/395] /usr/bin/g++ -DField3DShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/Dim3D.cpp.o -MF core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/Dim3D.cpp.o.d -o core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/Dim3D.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Dim3D.cpp
[5/395] /usr/bin/g++ -DLoggerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/Logger/CMakeFiles/LoggerShared.dir/CC3DLogger.cpp.o -MF core/Logger/CMakeFiles/LoggerShared.dir/CC3DLogger.cpp.o.d -o core/Logger/CMakeFiles/LoggerShared.dir/CC3DLogger.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Logger/CC3DLogger.cpp
[6/395] /usr/bin/g++ -DField3DShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/AdjacentNeighbor.cpp.o -MF core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/AdjacentNeighbor.cpp.o.d -o core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/AdjacentNeighbor.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/AdjacentNeighbor.cpp
[7/395] /usr/bin/g++ -DField3DShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/Field3D.cpp.o -MF core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/Field3D.cpp.o.d -o core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/Field3D.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.cpp
[8/395] /usr/bin/g++ -DField3DShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/NeighborFinder.cpp.o -MF core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/NeighborFinder.cpp.o.d -o core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/NeighborFinder.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NeighborFinder.cpp
[9/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/Logger/CMakeFiles/LoggerShared.dir/link.d -Wl,-soname,libCC3DLogger.so.4.9 -o core/Logger/libCC3DLogger.so.4.9.0 core/Logger/CMakeFiles/LoggerShared.dir/CC3DLogger.cpp.o   && :
[10/395] /usr/bin/cmake -E cmake_symlink_library core/Logger/libCC3DLogger.so.4.9.0  core/Logger/libCC3DLogger.so.4.9 core/Logger/libCC3DLogger.so && :
[11/395] /usr/bin/g++ -DField3DShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/WatchableField3D.cpp.o -MF core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/WatchableField3D.cpp.o.d -o core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/WatchableField3D.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.cpp
[12/395] /usr/bin/g++ -DBoundaryShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/Boundary.cpp.o -MF core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/Boundary.cpp.o.d -o core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/Boundary.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/Boundary.cpp
[13/395] /usr/bin/g++ -DBoundaryShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/DefaultAlgorithm.cpp.o -MF core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/DefaultAlgorithm.cpp.o.d -o core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/DefaultAlgorithm.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/DefaultAlgorithm.cpp
[14/395] /usr/bin/g++ -DField3DShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/NumpyArrayWrapper.cpp.o -MF core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/NumpyArrayWrapper.cpp.o.d -o core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/NumpyArrayWrapper.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper.cpp
[15/395] /usr/bin/g++ -DBoundaryShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/PeriodicBoundary.cpp.o -MF core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/PeriodicBoundary.cpp.o.d -o core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/PeriodicBoundary.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/PeriodicBoundary.cpp
[16/395] /usr/bin/g++ -DBoundaryShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/NoFluxBoundary.cpp.o -MF core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/NoFluxBoundary.cpp.o.d -o core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/NoFluxBoundary.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/NoFluxBoundary.cpp
[17/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/link.d -Wl,-soname,libCC3DField3D.so.4.9 -o core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0 core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/AdjacentNeighbor.cpp.o core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/Field3DChangeWatcher.cpp.o core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/Field3DIndex.cpp.o core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/Point3D.cpp.o core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/Dim3D.cpp.o core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/Field3D.cpp.o core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/NeighborFinder.cpp.o core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/WatchableField3D.cpp.o core/CompuCell3D/Field3D/CMakeFiles/Field3DShared.dir/NumpyArrayWrapper.cpp.o  -Wl,-rpath,"\$ORIGIN/../../Logger:"  core/Logger/libCC3DLogger.so.4.9.0 && :
[18/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9 core/CompuCell3D/Field3D/libCC3DField3D.so && :
[19/395] /usr/bin/g++ -DPublicUtilitiesShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/PublicUtilities/CMakeFiles/PublicUtilitiesShared.dir/FileUtils.cpp.o -MF core/PublicUtilities/CMakeFiles/PublicUtilitiesShared.dir/FileUtils.cpp.o.d -o core/PublicUtilities/CMakeFiles/PublicUtilitiesShared.dir/FileUtils.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/FileUtils.cpp
[20/395] /usr/bin/g++ -DBoundaryShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/ChengbangAlgorithm.cpp.o -MF core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/ChengbangAlgorithm.cpp.o.d -o core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/ChengbangAlgorithm.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/ChengbangAlgorithm.cpp
[21/395] /usr/bin/g++ -DPublicUtilitiesShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/PublicUtilities/CMakeFiles/PublicUtilitiesShared.dir/Vector3.cpp.o -MF core/PublicUtilities/CMakeFiles/PublicUtilitiesShared.dir/Vector3.cpp.o.d -o core/PublicUtilities/CMakeFiles/PublicUtilitiesShared.dir/Vector3.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/Vector3.cpp
[22/395] /usr/bin/g++ -DPublicUtilitiesShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/PublicUtilities/CMakeFiles/PublicUtilitiesShared.dir/StringUtils.cpp.o -MF core/PublicUtilities/CMakeFiles/PublicUtilitiesShared.dir/StringUtils.cpp.o.d -o core/PublicUtilities/CMakeFiles/PublicUtilitiesShared.dir/StringUtils.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:3:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[23/395] /usr/bin/g++ -DPublicUtilitiesShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/PublicUtilities/CMakeFiles/PublicUtilitiesShared.dir/NumericalUtils.cpp.o -MF core/PublicUtilities/CMakeFiles/PublicUtilitiesShared.dir/NumericalUtils.cpp.o.d -o core/PublicUtilities/CMakeFiles/PublicUtilitiesShared.dir/NumericalUtils.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/NumericalUtils.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/NumericalUtils.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/NumericalUtils.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/NumericalUtils.cpp: In function ‘Coordinates3D<double> CompuCell3D::distanceVectorCoordinatesInvariant(const Coordinates3D<double>&, const Coordinates3D<double>&, const Point3D&, BoundaryStrategy*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/NumericalUtils.cpp:292:35: warning: variable ‘field_span_vec’ set but not used [-Wunused-but-set-variable=]
  292 |             Coordinates3D<double> field_span_vec = boundaryStrategy->getLatticeSpanVector();
      |                                   ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/NumericalUtils.cpp: In function ‘CompuCell3D::CenterOfMassPair_t CompuCell3D::precalculateAfterFlipCM(const Point3D&, const CellG*, const CellG*, const Point3D&, const Point3D&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/NumericalUtils.cpp:413:13: warning: variable ‘x’ set but not used [-Wunused-but-set-variable=]
  413 |         int x, y, z;
      |             ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/NumericalUtils.cpp:413:16: warning: variable ‘y’ set but not used [-Wunused-but-set-variable=]
  413 |         int x, y, z;
      |                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/NumericalUtils.cpp:413:19: warning: variable ‘z’ set but not used [-Wunused-but-set-variable=]
  413 |         int x, y, z;
      |                   ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/NumericalUtils.cpp:414:13: warning: variable ‘xo’ set but not used [-Wunused-but-set-variable=]
  414 |         int xo, yo, zo;
      |             ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/NumericalUtils.cpp:414:17: warning: variable ‘yo’ set but not used [-Wunused-but-set-variable=]
  414 |         int xo, yo, zo;
      |                 ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/NumericalUtils.cpp:414:21: warning: variable ‘zo’ set but not used [-Wunused-but-set-variable=]
  414 |         int xo, yo, zo;
      |                     ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/NumericalUtils.cpp:620:5: warning: control reaches end of non-void function [-Wreturn-type]
  620 |     }
      |     ^
[24/395] /usr/bin/g++ -DBoundaryShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/BoundaryStrategy.cpp.o -MF core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/BoundaryStrategy.cpp.o.d -o core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/BoundaryStrategy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.cpp:20:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/AlgorithmFactory.h:1: warning: header guard ‘ALGROITHMFACTORY_H’ followed by ‘#define’ of a different macro [-Wheader-guard]
    1 | #ifndef ALGROITHMFACTORY_H
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/AlgorithmFactory.h:2: note: ‘ALGORITHMFACTORY_H’ is defined here; did you mean ‘ALGROITHMFACTORY_H’?
    2 | #define ALGORITHMFACTORY_H
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.cpp:15:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<char>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.cpp:299:34:   required from here
  299 |     Dim3D tmpFieldDim = tempField.getDim();
      |                                  ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = char]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = char]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.cpp: In member function ‘void CompuCell3D::BoundaryStrategy::getOffsetsAndDistances(CompuCell3D::Point3D, float, const CompuCell3D::Field3DImpl<char>&, std::vector<CompuCell3D::Point3D>&, std::vector<float>&, std::vector<unsigned int>&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.cpp:337:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::Point3D>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  337 |     for (int i = 0; i < offsetVecTmp.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.cpp:358:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<float>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  358 |     for (int i = 0; i < distanceVecTmp.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.cpp: In member function ‘void CompuCell3D::BoundaryStrategy::prepareNeighborListsSquare(float)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.cpp:440:9: warning: unused variable ‘margin’ [-Wunused-variable]
  440 |     int margin = 2 * (int) fabs(_maxDistance) + 1;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.cpp: In member function ‘unsigned int CompuCell3D::BoundaryStrategy::getMaxNeighborIndexFromNeighborOrderNoGenImpl(unsigned int, const std::vector<float>&, const std::vector<std::vector<float> >&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.cpp:911:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<float>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  911 |         for (int i = 0; i < hexDistanceArrayRef[indexHex].size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.cpp:931:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<float>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  931 |         for (int i = 0; i < distanceVecRef.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.cpp: In member function ‘unsigned int CompuCell3D::BoundaryStrategy::getMaxNeighborIndexFromNeighborOrder(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.cpp:994:18: warning: unused variable ‘maxNeighborIndex’ [-Wunused-variable]
  994 |     unsigned int maxNeighborIndex = 0;
      |                  ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.cpp:995:18: warning: unused variable ‘orderCounter’ [-Wunused-variable]
  995 |     unsigned int orderCounter = 1;
      |                  ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.cpp: In member function ‘unsigned int CompuCell3D::BoundaryStrategy::getMaxNeighborIndexFromDepthImpl(float, const std::vector<float>&, const std::vector<std::vector<float> >&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.cpp:1037:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<float>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1037 |         for (int i = 0; i < hexDistanceArrayRef[indexHex].size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.cpp:1048:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<float>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1048 |         for (int i = 0; i < distanceVecRef.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.cpp: In member function ‘CompuCell3D::Neighbor CompuCell3D::BoundaryStrategy::getNeighborDirectImpl(CompuCell3D::Point3D&, unsigned int, bool, bool, const std::vector<CompuCell3D::Point3D>&, const std::vector<float>&, const std::vector<std::vector<CompuCell3D::Point3D> >&, const std::vector<std::vector<float> >&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.cpp:1174:1: warning: control reaches end of non-void function [-Wreturn-type]
 1174 | }
      | ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.cpp:1156:59: warning: ‘indexHex’ may be used uninitialized [-Wmaybe-uninitialized]
 1156 |                     n.distance = hexDistanceArray[indexHex][idx];
      |                                                           ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.cpp:1102:18: note: ‘indexHex’ was declared here
 1102 |     unsigned int indexHex;
      |                  ^~~~~~~~
[25/395] /usr/bin/g++ -DXMLUtilsShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/XMLUtils/CMakeFiles/XMLUtilsShared.dir/CC3DXMLElementWalker.cpp.o -MF core/XMLUtils/CMakeFiles/XMLUtilsShared.dir/CC3DXMLElementWalker.cpp.o.d -o core/XMLUtils/CMakeFiles/XMLUtilsShared.dir/CC3DXMLElementWalker.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/XMLUtils/CC3DXMLElementWalker.cpp
[26/395] /usr/bin/g++ -DPublicUtilitiesShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/PublicUtilities/CMakeFiles/PublicUtilitiesShared.dir/ParallelUtilsOpenMP.cpp.o -MF core/PublicUtilities/CMakeFiles/PublicUtilitiesShared.dir/ParallelUtilsOpenMP.cpp.o.d -o core/PublicUtilities/CMakeFiles/PublicUtilitiesShared.dir/ParallelUtilsOpenMP.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp: In member function ‘void CompuCell3D::ParallelUtilsOpenMP::calculateFESolverPartitionWithBoxWatcher(const CompuCell3D::Dim3D&, const CompuCell3D::Dim3D&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:285:61: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  285 |         if((_boxMax.z-_boxMin.z)==1 || (_boxMax.z-_boxMin.z)<optimalNumberOfThreads){//2D case or quasi 2D case, we will divide thread workloads according fieldDim.y
      |                                        ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:286:41: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  286 |                 if((_boxMax.y-_boxMin.y)>optimalNumberOfThreads){ // fieldDim.y is large enough so that it can be divided
      |                    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:297:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  297 |                         for (int i  = 0 ; i < threadNum ; ++i){
      |                                           ~~^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:318:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  318 |                         for (int i  = 0 ; i < threadNum ; ++i){
      |                                           ~~^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:330:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  330 |         if((_boxMax.z-_boxMin.z)>=optimalNumberOfThreads){//z dimension is large enough so that we can divide lattice using optimal division scheme
      |            ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:343:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  343 |                 for (int i  = 0 ; i < threadNum ; ++i){
      |                                   ~~^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp: In member function ‘void CompuCell3D::ParallelUtilsOpenMP::calculateFESolverPartition()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:371:39: warning: comparison of integer expressions of different signedness: ‘short int’ and ‘unsigned int’ [-Wsign-compare]
  371 |         if(fieldDim.z==1 || fieldDim.z<optimalNumberOfThreads){//2D case or quasi 2D case, we will divide thread workloads according fieldDim.y
      |                             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:372:30: warning: comparison of integer expressions of different signedness: ‘short int’ and ‘unsigned int’ [-Wsign-compare]
  372 |                 if(fieldDim.y>optimalNumberOfThreads){ // fieldDim.y is large enough so that it can be divided
      |                    ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:383:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  383 |                         for (int i  = 0 ; i < threadNum ; ++i){
      |                                           ~~^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:404:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  404 |                         for (int i  = 0 ; i < threadNum ; ++i){
      |                                           ~~^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:415:22: warning: comparison of integer expressions of different signedness: ‘short int’ and ‘unsigned int’ [-Wsign-compare]
  415 |         if(fieldDim.z>=optimalNumberOfThreads){//z dimension is large enough so that we can divide lattice using optimal division scheme
      |            ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:428:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  428 |                 for (int i  = 0 ; i < threadNum ; ++i){
      |                                   ~~^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp: In member function ‘std::vector<unsigned int> CompuCell3D::ParallelUtilsOpenMP::calculatePartitioning(unsigned int, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:535:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  535 |         for(int i  = 0 ;i < primeFactorsSize ; ++i ){
      |                         ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:540:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  540 |         for(int i  = 0 ;i < primeFactorsSize ; ++i ){
      |                         ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp: In member function ‘void CompuCell3D::ParallelUtilsOpenMP::calculatePottsPartition()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:626:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  626 |                 if(i!=indexMin && i!=indexMax){
      |                    ~^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:626:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  626 |                 if(i!=indexMin && i!=indexMax){
      |                                   ~^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp: In member function ‘void CompuCell3D::ParallelUtilsOpenMP::partitionLattice(unsigned int, unsigned int, unsigned int, std::vector<unsigned int>)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:686:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  686 |         for (int i  = 0 ; i < minDimGridPoints ; ++i){
      |                           ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:690:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  690 |         for (int i  = 0 ; i < middleDimGridPoints ; ++i){
      |                           ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:694:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  694 |         for (int i  = 0 ; i < maxDimGridPoints ; ++i){
      |                           ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:707:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<short int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  707 |         for (int i = 0  ; i < minDimDivisionVec.size() ; ++i)
      |                           ~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:708:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<short int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  708 |                 for (int j = 0  ; j < middleDimDivisionVec.size() ; ++j)
      |                                   ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:709:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<short int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  709 |                         for (int k = 0  ; k < maxDimDivisionVec.size() ; ++k){
      |                                           ~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:718:52: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<short int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  718 |                                 maxDim[indexMin]=(i<minDimDivisionVec.size()-1 ?  minDimDivisionVec[i+1]: fieldDim[indexMin] );
      |                                                   ~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:719:55: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<short int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  719 |                                 maxDim[indexMiddle]=(j<middleDimDivisionVec.size()-1 ?  middleDimDivisionVec[j+1]: fieldDim[indexMiddle] );
      |                                                      ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:720:52: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<short int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  720 |                                 maxDim[indexMax]=(k<maxDimDivisionVec.size()-1 ?  maxDimDivisionVec[k+1]: fieldDim[indexMax] );
      |                                                   ~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:708:17: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  708 |                 for (int j = 0  ; j < middleDimDivisionVec.size() ; ++j)
      |                 ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:728:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  728 |                         int gridIdMax=gridId;
      |                         ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:744:52: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  744 |                                 for (int i = 0 ; i < minIndexSubgrids ; ++i)//minIndex
      |                                                  ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp: In member function ‘CompuCell3D::ParallelUtilsOpenMP::calculatePottsPartition()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:635:30: warning: ‘indexMiddle’ may be used uninitialized [-Wmaybe-uninitialized]
  635 |         dimIndexOrderedVec[1]=indexMiddle;
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:623:22: note: ‘indexMiddle’ was declared here
  623 |         unsigned int indexMiddle;
      |                      ^~~~~~~~~~~
In file included from /usr/include/c++/16/ostream:42,
                 from /usr/include/c++/16/iostream:43,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.h:11,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:1:
In member function ‘std::basic_ostream<char, std::char_traits<char> >::operator<<(unsigned short)’,
    inlined from ‘CompuCell3D::ParallelUtilsOpenMP::calculatePottsPartition()’ at /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:649:152:
/usr/include/c++/16/bits/ostream.h:193:25: warning: ‘middleDimCoord’ may be used uninitialized [-Wmaybe-uninitialized]
  193 |         return _M_insert(static_cast<unsigned long>(__n));
      |                ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp: In member function ‘CompuCell3D::ParallelUtilsOpenMP::calculatePottsPartition()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/ParallelUtilsOpenMP.cpp:624:24: note: ‘middleDimCoord’ was declared here
  624 |         unsigned short middleDimCoord;
      |                        ^~~~~~~~~~~~~~
[27/395] /usr/bin/g++ -DmuParserShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/muParser/CMakeFiles/muParserShared.dir/muParser.cpp.o -MF core/muParser/CMakeFiles/muParserShared.dir/muParser.cpp.o.d -o core/muParser/CMakeFiles/muParserShared.dir/muParser.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser/muParser.cpp
[28/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/link.d -Wl,-soname,libCC3DBoundary.so.4.9 -o core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0 core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/BoundaryStrategy.cpp.o core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/Boundary.cpp.o core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/DefaultAlgorithm.cpp.o core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/PeriodicBoundary.cpp.o core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/ChengbangAlgorithm.cpp.o core/CompuCell3D/Boundary/CMakeFiles/BoundaryShared.dir/NoFluxBoundary.cpp.o  -Wl,-rpath,"\$ORIGIN/../Field3D:\$ORIGIN/../../Logger:"  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0 && :
[29/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9 core/CompuCell3D/Boundary/libCC3DBoundary.so && :
[30/395] /usr/bin/g++ -DXMLUtilsShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/XMLUtils/CMakeFiles/XMLUtilsShared.dir/CC3DXMLElement.cpp.o -MF core/XMLUtils/CMakeFiles/XMLUtilsShared.dir/CC3DXMLElement.cpp.o.d -o core/XMLUtils/CMakeFiles/XMLUtilsShared.dir/CC3DXMLElement.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/XMLUtils/CC3DXMLElement.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/XMLUtils/CC3DXMLElement.cpp:9:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /usr/include/c++/16/bits/locale_classes.h:43,
                 from /usr/include/c++/16/bits/ios_base.h:43,
                 from /usr/include/c++/16/ios:46,
                 from /usr/include/c++/16/istream:42,
                 from /usr/include/c++/16/fstream:42,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/XMLUtils/CC3DXMLElement.cpp:2:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/XMLUtils/CC3DXMLElement.cpp:8:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/XMLUtils/CC3DXMLElement.h: In constructor ‘CC3DXMLElement::CC3DXMLElement(std::string, std::map<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >, std::string)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/XMLUtils/CC3DXMLElement.h:115:43: warning: ‘CC3DXMLElement::attributes’ will be initialized after [-Wreorder]
  115 |         std::map<std::string,std::string> attributes;
      |                                           ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/XMLUtils/CC3DXMLElement.h:114:21: warning:   ‘std::string CC3DXMLElement::cdata’ [-Wreorder]
  114 |         std::string cdata;
      |                     ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/XMLUtils/CC3DXMLElement.cpp:38:1: warning:   when initialized here [-Wreorder]
   38 | CC3DXMLElement::CC3DXMLElement(std::string  _name, std::map<std::string,std::string> _attributes,std::string _cdata):
      | ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/XMLUtils/CC3DXMLElement.cpp: In member function ‘void CC3DXMLElement::writeCC3DXMLElement(std::ostream&, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/XMLUtils/CC3DXMLElement.cpp:130:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  130 |                 for(int i=0 ; i < children.size() ; ++i){
      |                               ~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/XMLUtils/CC3DXMLElement.cpp: In member function ‘void CC3DXMLElement::writeCC3DXMLElementInPython(std::ostream&, std::string, int, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/XMLUtils/CC3DXMLElement.cpp:302:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  302 |         for(int i=0 ; i < children.size() ; ++i){
      |                       ~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/XMLUtils/CC3DXMLElement.cpp: In member function ‘virtual CC3DXMLElement* CC3DXMLElement::getFirstElement(std::string, std::map<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/XMLUtils/CC3DXMLElement.cpp:316:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  316 |         for(int i = 0 ; i< children.size() ; ++i){
      |                         ~^~~~~~~~~~~~~~~~~
[31/395] /usr/bin/g++ -DmuParserShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/muParser/CMakeFiles/muParserShared.dir/muParserBytecode.cpp.o -MF core/muParser/CMakeFiles/muParserShared.dir/muParserBytecode.cpp.o.d -o core/muParser/CMakeFiles/muParserShared.dir/muParserBytecode.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser/muParserBytecode.cpp
[32/395] /usr/bin/g++ -DmuParserShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/muParser/CMakeFiles/muParserShared.dir/muParserCallback.cpp.o -MF core/muParser/CMakeFiles/muParserShared.dir/muParserCallback.cpp.o.d -o core/muParser/CMakeFiles/muParserShared.dir/muParserCallback.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser/muParserCallback.cpp
[33/395] /usr/bin/g++ -DmuParserShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/muParser/CMakeFiles/muParserShared.dir/muParserError.cpp.o -MF core/muParser/CMakeFiles/muParserShared.dir/muParserError.cpp.o.d -o core/muParser/CMakeFiles/muParserShared.dir/muParserError.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser/muParserError.cpp
[34/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/PublicUtilities/CMakeFiles/PublicUtilitiesShared.dir/link.d -Wl,-soname,libCC3DPublicUtilities.so.4.9 -o core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0 core/PublicUtilities/CMakeFiles/PublicUtilitiesShared.dir/FileUtils.cpp.o core/PublicUtilities/CMakeFiles/PublicUtilitiesShared.dir/NumericalUtils.cpp.o core/PublicUtilities/CMakeFiles/PublicUtilitiesShared.dir/StringUtils.cpp.o core/PublicUtilities/CMakeFiles/PublicUtilitiesShared.dir/Vector3.cpp.o core/PublicUtilities/CMakeFiles/PublicUtilitiesShared.dir/ParallelUtilsOpenMP.cpp.o  -Wl,-rpath,"\$ORIGIN/../CompuCell3D/Boundary:\$ORIGIN/../CompuCell3D/Field3D:\$ORIGIN/../Logger:"  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[35/395] /usr/bin/cmake -E cmake_symlink_library core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9 core/PublicUtilities/libCC3DPublicUtilities.so && :
[36/395] /usr/bin/g++ -DmuParserShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/muParser/CMakeFiles/muParserShared.dir/muParserInt.cpp.o -MF core/muParser/CMakeFiles/muParserShared.dir/muParserInt.cpp.o.d -o core/muParser/CMakeFiles/muParserShared.dir/muParserInt.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser/muParserInt.cpp
[37/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/XMLUtils/CMakeFiles/XMLUtilsShared.dir/link.d -Wl,-soname,libCC3DXMLUtils.so.4.9 -o core/XMLUtils/libCC3DXMLUtils.so.4.9.0 core/XMLUtils/CMakeFiles/XMLUtilsShared.dir/CC3DXMLElement.cpp.o core/XMLUtils/CMakeFiles/XMLUtilsShared.dir/CC3DXMLElementWalker.cpp.o  -Wl,-rpath,"\$ORIGIN/../PublicUtilities:\$ORIGIN/../CompuCell3D/Boundary:\$ORIGIN/../CompuCell3D/Field3D:\$ORIGIN/../Logger:"  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[38/395] /usr/bin/cmake -E cmake_symlink_library core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/XMLUtils/libCC3DXMLUtils.so.4.9 core/XMLUtils/libCC3DXMLUtils.so && :
[39/395] /usr/bin/g++ -DmuParserShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/muParser/CMakeFiles/muParserShared.dir/muParserBase.cpp.o -MF core/muParser/CMakeFiles/muParserShared.dir/muParserBase.cpp.o.d -o core/muParser/CMakeFiles/muParserShared.dir/muParserBase.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser/muParserBase.cpp
[40/395] /usr/bin/g++ -DAutomatonShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/CompuCell3D/Automaton/CMakeFiles/AutomatonShared.dir/CellType.cpp.o -MF core/CompuCell3D/Automaton/CMakeFiles/AutomatonShared.dir/CellType.cpp.o.d -o core/CompuCell3D/Automaton/CMakeFiles/AutomatonShared.dir/CellType.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CellType.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CellType.cpp:8:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
[41/395] /usr/bin/g++ -DAutomatonShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/CompuCell3D/Automaton/CMakeFiles/AutomatonShared.dir/Transition.cpp.o -MF core/CompuCell3D/Automaton/CMakeFiles/AutomatonShared.dir/Transition.cpp.o.d -o core/CompuCell3D/Automaton/CMakeFiles/AutomatonShared.dir/Transition.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Transition.cpp
[42/395] /usr/bin/g++ -DPotts3DShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/AttributeAdder.cpp.o -MF core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/AttributeAdder.cpp.o.d -o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/AttributeAdder.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/AttributeAdder.cpp
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/AttributeAdder.cpp: In destructor ‘virtual CompuCell3D::AttributeAdder::~AttributeAdder()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/AttributeAdder.cpp:7:9: warning: deleting object of polymorphic class type ‘CompuCell3D::AttributeAdderWatcher’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
    7 |         delete cInvWatcher;
      |         ^~~~~~~~~~~~~~~~~~
[43/395] /usr/bin/g++ -DPotts3DShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/Cell.cpp.o -MF core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/Cell.cpp.o.d -o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/Cell.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
[44/395] /usr/bin/g++ -DmuParserShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/muParser/CMakeFiles/muParserShared.dir/muParserTokenReader.cpp.o -MF core/muParser/CMakeFiles/muParserShared.dir/muParserTokenReader.cpp.o.d -o core/muParser/CMakeFiles/muParserShared.dir/muParserTokenReader.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser/muParserTokenReader.cpp
[45/395] /usr/bin/g++ -DAutomatonShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -MD -MT core/CompuCell3D/Automaton/CMakeFiles/AutomatonShared.dir/Automaton.cpp.o -MF core/CompuCell3D/Automaton/CMakeFiles/AutomatonShared.dir/Automaton.cpp.o.d -o core/CompuCell3D/Automaton/CMakeFiles/AutomatonShared.dir/Automaton.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
[46/395] /usr/bin/g++ -DExpressionEvaluatorShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/muParser/ExpressionEvaluator/CMakeFiles/ExpressionEvaluatorShared.dir/ExpressionEvaluator.cpp.o -MF core/muParser/ExpressionEvaluator/CMakeFiles/ExpressionEvaluatorShared.dir/ExpressionEvaluator.cpp.o.d -o core/muParser/ExpressionEvaluator/CMakeFiles/ExpressionEvaluatorShared.dir/ExpressionEvaluator.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser/ExpressionEvaluator/ExpressionEvaluator.cpp
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser/ExpressionEvaluator/ExpressionEvaluator.cpp: In member function ‘void ExpressionEvaluatorDepot::getParseData(CC3DXMLElement*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser/ExpressionEvaluator/ExpressionEvaluator.cpp:62:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   62 |         for (int i =0 ; i < variableVecXML.size() ; ++i){
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser/ExpressionEvaluator/ExpressionEvaluator.cpp:69:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   69 |         for (int i =0 ; i < builtinVariableVecXML.size() ; ++i){
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser/ExpressionEvaluator/ExpressionEvaluator.cpp: In member function ‘void ExpressionEvaluatorDepot::initializeUsingParseData()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser/ExpressionEvaluator/ExpressionEvaluator.cpp:83:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::pair<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   83 |         for (int i =0 ; i < parseData.builtinVariableAliasPairVec.size() ; ++i){
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser/ExpressionEvaluator/ExpressionEvaluator.cpp: In member function ‘void ExpressionEvaluatorDepot::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser/ExpressionEvaluator/ExpressionEvaluator.cpp:109:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  109 |         for (int i =0 ; i < variableVecXML.size() ; ++i){
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser/ExpressionEvaluator/ExpressionEvaluator.cpp:116:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  116 |         for (int i =0 ; i < builtinVariableVecXML.size() ; ++i){
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser/ExpressionEvaluator/ExpressionEvaluator.cpp:128:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::pair<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  128 |         for (int i =0 ; i < builtinVariableAliasPairVec.size() ; ++i){
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[47/395] /usr/bin/g++ -DPotts3DShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/DefaultAcceptanceFunction.cpp.o -MF core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/DefaultAcceptanceFunction.cpp.o.d -o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/DefaultAcceptanceFunction.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/DefaultAcceptanceFunction.cpp
[48/395] /usr/bin/g++ -DPotts3DShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/CellInventory.cpp.o -MF core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/CellInventory.cpp.o.d -o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/CellInventory.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/CellInventory.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/CellInventory.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/CellInventory.cpp:6:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
[49/395] /usr/bin/g++ -DPotts3DShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/CustomAcceptanceFunction.cpp.o -MF core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/CustomAcceptanceFunction.cpp.o.d -o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/CustomAcceptanceFunction.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/CustomAcceptanceFunction.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/CustomAcceptanceFunction.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /usr/include/c++/16/bits/locale_classes.h:43,
                 from /usr/include/c++/16/bits/ios_base.h:43,
                 from /usr/include/c++/16/ios:46,
                 from /usr/include/c++/16/bits/ostream.h:43,
                 from /usr/include/c++/16/ostream:42,
                 from /usr/include/c++/16/iostream:43,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3DExceptions.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:6:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:33:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[50/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/muParser/CMakeFiles/muParserShared.dir/link.d -Wl,-soname,libCC3DmuParser.so.4.9 -o core/muParser/libCC3DmuParser.so.4.9.0 core/muParser/CMakeFiles/muParserShared.dir/muParser.cpp.o core/muParser/CMakeFiles/muParserShared.dir/muParserBase.cpp.o core/muParser/CMakeFiles/muParserShared.dir/muParserBytecode.cpp.o core/muParser/CMakeFiles/muParserShared.dir/muParserCallback.cpp.o core/muParser/CMakeFiles/muParserShared.dir/muParserError.cpp.o core/muParser/CMakeFiles/muParserShared.dir/muParserInt.cpp.o core/muParser/CMakeFiles/muParserShared.dir/muParserTokenReader.cpp.o   && :
[51/395] /usr/bin/cmake -E cmake_symlink_library core/muParser/libCC3DmuParser.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9 core/muParser/libCC3DmuParser.so && :
[52/395] /usr/bin/g++ -DPotts3DShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/EnergyFunctionCalculator.cpp.o -MF core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/EnergyFunctionCalculator.cpp.o.d -o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/EnergyFunctionCalculator.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculator.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunction.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculator.cpp:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
[53/395] /usr/bin/g++ -DPotts3DShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/TypeTransition.cpp.o -MF core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/TypeTransition.cpp.o.d -o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/TypeTransition.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/TypeTransition.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/TypeTransition.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/TypeTransition.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/TypeTransition.cpp: In member function ‘void CompuCell3D::TypeTransition::setType(CompuCell3D::CellG*, CompuCell3D::CellG::CellType_t)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/TypeTransition.cpp:12:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::TypeChangeWatcher*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   12 |     for (int i = 0; i < typeChangeWatcherVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[54/395] /usr/bin/g++ -DPotts3DShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/EnergyFunctionCalculatorTestDataGeneration.cpp.o -MF core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/EnergyFunctionCalculatorTestDataGeneration.cpp.o.d -o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/EnergyFunctionCalculatorTestDataGeneration.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorTestDataGeneration.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunction.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorTestDataGeneration.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorTestDataGeneration.cpp:4:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculator.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorTestDataGeneration.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorTestDataGeneration.cpp:1:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[55/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/muParser/ExpressionEvaluator/CMakeFiles/ExpressionEvaluatorShared.dir/link.d -Wl,-soname,libCC3DExpressionEvaluator.so.4.9 -o core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0 core/muParser/ExpressionEvaluator/CMakeFiles/ExpressionEvaluatorShared.dir/ExpressionEvaluator.cpp.o  -Wl,-rpath,"\$ORIGIN/../:\$ORIGIN/../../XMLUtils:\$ORIGIN/../../PublicUtilities:\$ORIGIN/../../CompuCell3D/Boundary:\$ORIGIN/../../CompuCell3D/Field3D:\$ORIGIN/../../Logger:"  core/muParser/libCC3DmuParser.so.4.9.0  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[56/395] /usr/bin/cmake -E cmake_symlink_library core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9 core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so && :
[57/395] /usr/bin/g++ -DPotts3DShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/StandardFluctuationAmplitudeFunctions.cpp.o -MF core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/StandardFluctuationAmplitudeFunctions.cpp.o.d -o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/StandardFluctuationAmplitudeFunctions.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/StandardFluctuationAmplitudeFunctions.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/StandardFluctuationAmplitudeFunctions.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/StandardFluctuationAmplitudeFunctions.cpp: In member function ‘virtual double CompuCell3D::MinFluctuationAmplitudeFunction::fluctuationAmplitude(const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/StandardFluctuationAmplitudeFunctions.cpp:21:12: warning: unused variable ‘fluctAmpl’ [-Wunused-variable]
   21 |     double fluctAmpl = potts->getTemperature();
      |            ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/StandardFluctuationAmplitudeFunctions.cpp: In member function ‘virtual double CompuCell3D::MaxFluctuationAmplitudeFunction::fluctuationAmplitude(const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/StandardFluctuationAmplitudeFunctions.cpp:105:12: warning: unused variable ‘fluctAmpl’ [-Wunused-variable]
  105 |     double fluctAmpl = potts->getTemperature();
      |            ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/StandardFluctuationAmplitudeFunctions.cpp: In member function ‘virtual double CompuCell3D::ArithmeticAverageFluctuationAmplitudeFunction::fluctuationAmplitude(const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/StandardFluctuationAmplitudeFunctions.cpp:189:12: warning: unused variable ‘fluctAmpl’ [-Wunused-variable]
  189 |     double fluctAmpl = potts->getTemperature();
      |            ^~~~~~~~~
[58/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/Automaton/CMakeFiles/AutomatonShared.dir/link.d -Wl,-soname,libCC3DAutomaton.so.4.9 -o core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0 core/CompuCell3D/Automaton/CMakeFiles/AutomatonShared.dir/Automaton.cpp.o core/CompuCell3D/Automaton/CMakeFiles/AutomatonShared.dir/CellType.cpp.o core/CompuCell3D/Automaton/CMakeFiles/AutomatonShared.dir/Transition.cpp.o   && :
[59/395] /usr/bin/g++ -DPotts3DShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/EnergyFunctionCalculatorStatistics.cpp.o -MF core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/EnergyFunctionCalculatorStatistics.cpp.o.d -o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/EnergyFunctionCalculatorStatistics.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunction.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:8:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculator.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:1:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp: In member function ‘virtual double CompuCell3D::EnergyFunctionCalculatorStatistics::changeEnergy(CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*, unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:84:26: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘int’ [-Wsign-compare]
   84 |         if (_flipAttempt < lastFlipAttempt) {
      |             ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp: In member function ‘void CompuCell3D::EnergyFunctionCalculatorStatistics::writeHeader()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:215:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::EnergyFunction*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  215 |     for (int i = 0; i < energyFunctions.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:224:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::EnergyFunction*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  224 |     for (int i = 0; i < energyFunctions.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:233:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::EnergyFunction*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  233 |     for (int i = 0; i < energyFunctions.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp: In member function ‘void CompuCell3D::EnergyFunctionCalculatorStatistics::calculateStatData()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:313:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  313 |         for (int i = 0; i < energyFunctionCount; ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:318:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  318 |             for (int i = 0; i < energyFunctionCount; ++i) {
      |                             ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:323:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  323 |             for (int i = 0; i < energyFunctionCount; ++i) {
      |                             ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:330:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::EnergyFunction*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  330 |     for (int i = 0; i < energyFunctions.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:347:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  347 |         for (int i = 0; i < energyFunctionCount; ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:352:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  352 |             for (int i = 0; i < energyFunctionCount; ++i) {
      |                             ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:357:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  357 |             for (int i = 0; i < energyFunctionCount; ++i) {
      |                             ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:368:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::EnergyFunction*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  368 |     for (int j = 0; j < energyFunctions.size(); ++j) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp: In member function ‘void CompuCell3D::EnergyFunctionCalculatorStatistics::writeHeaderFlex(std::ofstream&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:385:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::EnergyFunction*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  385 |     for (int i = 0; i < energyFunctions.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp: In member function ‘void CompuCell3D::EnergyFunctionCalculatorStatistics::writeDataLineFlex(std::ofstream&, std::vector<double>&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:399:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  399 |     for (int i = 0; i < _energies.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp: In member function ‘void CompuCell3D::EnergyFunctionCalculatorStatistics::outputResultsSingleSpinFlipGatherResults()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:466:25: warning: unused variable ‘energyData’ [-Wunused-variable]
  466 |         vector<double> &energyData = *lVecItr;
      |                         ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp: In member function ‘void CompuCell3D::EnergyFunctionCalculatorStatistics::outputResultsSingleSpinFlip()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:532:25: warning: unused variable ‘energyData’ [-Wunused-variable]
  532 |         vector<double> &energyData = *lVecItr;
      |                         ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp: In member function ‘void CompuCell3D::EnergyFunctionCalculatorStatistics::outputResults()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:564:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::EnergyFunction*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  564 |     for (int i = 0; i < energyFunctions.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:575:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::EnergyFunction*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  575 |         for (int i = 0; i < energyFunctions.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:578:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::EnergyFunction*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  578 |         for (int i = 0; i < energyFunctions.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.cpp:581:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::EnergyFunction*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  581 |         for (int i = 0; i < energyFunctions.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~
[60/395] /usr/bin/g++ -DCompuCellLibShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/PluginInfo.cpp.o -MF core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/PluginInfo.cpp.o.d -o core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/PluginInfo.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginInfo.cpp
[61/395] /usr/bin/g++ -DPotts3DShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/PottsTestData.cpp.o -MF core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/PottsTestData.cpp.o.d -o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/PottsTestData.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/PottsTestData.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/PottsTestData.cpp:9:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /usr/include/c++/16/bits/locale_classes.h:43,
                 from /usr/include/c++/16/bits/ios_base.h:43,
                 from /usr/include/c++/16/ios:46,
                 from /usr/include/c++/16/bits/ostream.h:43,
                 from /usr/include/c++/16/ostream:42,
                 from /usr/include/c++/16/iostream:43,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Point3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/PottsTestData.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/PottsTestData.cpp:1:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
[62/395] /usr/bin/g++ -DCompuCellLibShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/ClassRegistry.cpp.o -MF core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/ClassRegistry.cpp.o.d -o core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/ClassRegistry.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ClassRegistry.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ClassRegistry.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /usr/include/c++/16/bits/locale_classes.h:43,
                 from /usr/include/c++/16/bits/ios_base.h:43,
                 from /usr/include/c++/16/ios:46,
                 from /usr/include/c++/16/bits/ostream.h:43,
                 from /usr/include/c++/16/ostream:42,
                 from /usr/include/c++/16/iostream:43,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3DExceptions.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:6:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:33:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ClassRegistry.cpp: In member function ‘virtual void CompuCell3D::ClassRegistry::initModules(CompuCell3D::Simulator*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ClassRegistry.cpp:63:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   63 |     for (int i = 0; i < steppableCC3DXMLElementVectorRef.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[63/395] /usr/bin/g++ -DCompuCellLibShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/DerivedProperty.cpp.o -MF core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/DerivedProperty.cpp.o.d -o core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/DerivedProperty.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/DerivedProperty.cpp
[64/395] /usr/bin/g++ -DCompuCellLibShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/RandomNumberGenerators.cpp.o -MF core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/RandomNumberGenerators.cpp.o.d -o core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/RandomNumberGenerators.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.cpp: In member function ‘virtual void CompuCell3D::RandomNumberGeneratorLegacy::setSeed(const unsigned int&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.cpp:55:14: warning: ‘int ftime(timeb*)’ is deprecated: Use gettimeofday or clock_gettime instead [-Wdeprecated-declarations]
   55 |         ftime(&t);
      |         ~~~~~^~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:6:
/usr/include/sys/timeb.h:29:12: note: declared here
   29 | extern int ftime (struct timeb *__timebuf)
      |            ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.cpp: In member function ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::generateRandomNumberGenerator(const unsigned int&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.cpp:106:12: warning: enumeration value ‘DEFAULT’ not handled in switch [-Wswitch]
  106 |     switch (type) {
      |            ^
[65/395] /usr/bin/g++ -DCompuCellLibShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/PottsParseData.cpp.o -MF core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/PottsParseData.cpp.o.d -o core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/PottsParseData.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PottsParseData.cpp
[66/395] /usr/bin/g++ -DCompuCellLibShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/ParserStorage.cpp.o -MF core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/ParserStorage.cpp.o.d -o core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/ParserStorage.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.cpp
[67/395] /usr/bin/g++ -DPotts3DShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/Potts3D.cpp.o -MF core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/Potts3D.cpp.o.d -o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/Potts3D.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunction.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:6:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h: In constructor ‘CompuCell3D::Potts3D::Potts3D()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:110:25: warning: ‘CompuCell3D::Potts3D::connectivityConstraint’ will be initialized after [-Wreorder]
  110 |         EnergyFunction *connectivityConstraint;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:97:36: warning:   ‘CompuCell3D::WatchableField3D<CompuCell3D::CellG*>* CompuCell3D::Potts3D::cellFieldG’ [-Wreorder]
   97 |         WatchableField3D<CellG *> *cellFieldG;
      |                                    ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:32:1: warning:   when initialized here [-Wreorder]
   32 | Potts3D::Potts3D() :
      | ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:180:20: warning: ‘CompuCell3D::Potts3D::sim’ will be initialized after [-Wreorder]
  180 |         Simulator *sim;
      |                    ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:135:20: warning:   ‘CompuCell3D::Automaton* CompuCell3D::Potts3D::automaton’ [-Wreorder]
  135 |         Automaton *automaton;
      |                    ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:32:1: warning:   when initialized here [-Wreorder]
   32 | Potts3D::Potts3D() :
      | ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h: In constructor ‘CompuCell3D::Potts3D::Potts3D(CompuCell3D::Dim3D)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:110:25: warning: ‘CompuCell3D::Potts3D::connectivityConstraint’ will be initialized after [-Wreorder]
  110 |         EnergyFunction *connectivityConstraint;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:97:36: warning:   ‘CompuCell3D::WatchableField3D<CompuCell3D::CellG*>* CompuCell3D::Potts3D::cellFieldG’ [-Wreorder]
   97 |         WatchableField3D<CellG *> *cellFieldG;
      |                                    ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:58:1: warning:   when initialized here [-Wreorder]
   58 | Potts3D::Potts3D(const Dim3D dim) :
      | ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:153:16: warning: ‘CompuCell3D::Potts3D::energy’ will be initialized after [-Wreorder]
  153 |         double energy;
      |                ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:146:14: warning:   ‘bool CompuCell3D::Potts3D::customAcceptanceExpressionDefined’ [-Wreorder]
  146 |         bool customAcceptanceExpressionDefined;
      |              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:58:1: warning:   when initialized here [-Wreorder]
   58 | Potts3D::Potts3D(const Dim3D dim) :
      | ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:180:20: warning: ‘CompuCell3D::Potts3D::sim’ will be initialized after [-Wreorder]
  180 |         Simulator *sim;
      |                    ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:135:20: warning:   ‘CompuCell3D::Automaton* CompuCell3D::Potts3D::automaton’ [-Wreorder]
  135 |         Automaton *automaton;
      |                    ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:58:1: warning:   when initialized here [-Wreorder]
   58 | Potts3D::Potts3D(const Dim3D dim) :
      | ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp: In member function ‘void CompuCell3D::Potts3D::resizeCellField(CompuCell3D::Dim3D, CompuCell3D::Dim3D)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:187:11: warning: variable ‘currentDim’ set but not used [-Wunused-but-set-variable=]
  187 |     Dim3D currentDim = cellFieldG->getDim();
      |           ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp: In member function ‘unsigned int CompuCell3D::Potts3D::metropolisList(unsigned int, double)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:528:11: warning: variable ‘dim’ set but not used [-Wunused-but-set-variable=]
  528 |     Dim3D dim = cellFieldG->getDim();
      |           ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:535:23: warning: unused variable ‘boundaryStrategy’ [-Wunused-variable]
  535 |     BoundaryStrategy *boundaryStrategy = BoundaryStrategy::getInstance();
      |                       ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp: In member function ‘unsigned int CompuCell3D::Potts3D::metropolisFast(unsigned int, double)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:690:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  690 |     for (int i = 0; i < subgridSectionOrderVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:693:19: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<unsigned int*, vector<unsigned int> >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations]
  693 |     random_shuffle(subgridSectionOrderVec.begin(), subgridSectionOrderVec.end());
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/16/algorithm:63,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:18:
/usr/include/c++/16/bits/stl_algo.h:4511:5: note: declared here
 4511 |     random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last)
      |     ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:750:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  750 |         for (int s = 0; s < subgridSectionOrderVec.size(); ++s) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:758:40: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  758 |             for (unsigned int i = 0; i < numberOfAttemptsLocal; ++i) {
      |                                      ~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:740:13: warning: unused variable ‘currentAttemptLocal’ [-Wunused-variable]
  740 |         int currentAttemptLocal;
      |             ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:698:18: warning: unused variable ‘numberOfSections’ [-Wunused-variable]
  698 |     unsigned int numberOfSections = pUtils->getNumberOfSubgridSectionsPotts();
      |                  ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:713:11: warning: variable ‘dim’ set but not used [-Wunused-but-set-variable=]
  713 |     Dim3D dim = cellFieldG->getDim();
      |           ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp: In member function ‘CompuCell3D::Point3D CompuCell3D::Potts3D::randomPickBoundaryPixel(CompuCell3D::RandomNumberGenerator*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:953:32: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  953 |         if (boundaryPointIndex < vec_size) {
      |             ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp: In member function ‘unsigned int CompuCell3D::Potts3D::metropolisBoundaryWalker(unsigned int, double)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:1039:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1039 |     for (int i = 0; i < subgridSectionOrderVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:1042:19: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<unsigned int*, vector<unsigned int> >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations]
 1042 |     random_shuffle(subgridSectionOrderVec.begin(), subgridSectionOrderVec.end());
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/bits/stl_algo.h:4511:5: note: declared here
 4511 |     random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last)
      |     ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:1110:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1110 |         for (int s = 0; s < subgridSectionOrderVec.size(); ++s) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:1112:33: warning: variable ‘sectionDims’ set but not used [-Wunused-but-set-variable=]
 1112 |             pair <Dim3D, Dim3D> sectionDims = pUtils->getPottsSection(currentWorkNodeNumber, s);
      |                                 ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:1100:13: warning: unused variable ‘currentAttemptLocal’ [-Wunused-variable]
 1100 |         int currentAttemptLocal;
      |             ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:1048:18: warning: unused variable ‘numberOfSections’ [-Wunused-variable]
 1048 |     unsigned int numberOfSections = pUtils->getNumberOfSubgridSectionsPotts();
      |                  ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:1063:11: warning: variable ‘dim’ set but not used [-Wunused-but-set-variable=]
 1063 |     Dim3D dim = cellFieldG->getDim();
      |           ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:1078:10: warning: unused variable ‘boundaryPointIndex’ [-Wunused-variable]
 1078 |     long boundaryPointIndex;
      |          ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:1079:10: warning: unused variable ‘counter’ [-Wunused-variable]
 1079 |     long counter = 0;
      |          ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp: In member function ‘unsigned int CompuCell3D::Potts3D::metropolisTestRun(unsigned int, double)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.cpp:1272:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::PottsTestData>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1272 |         for (auto i = 0; i < potts_test_data_vector.size(); ++i) {
      |                          ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[68/395] /usr/bin/g++ -DCompuCellLibShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/PluginManager.cpp.o -MF core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/PluginManager.cpp.o.d -o core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/PluginManager.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /usr/include/c++/16/bits/locale_classes.h:43,
                 from /usr/include/c++/16/bits/ios_base.h:43,
                 from /usr/include/c++/16/ios:46,
                 from /usr/include/c++/16/bits/ostream.h:43,
                 from /usr/include/c++/16/ostream:42,
                 from /usr/include/c++/16/iostream:43,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:25:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:33:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.cpp: In member function ‘void CompuCell3D::PluginManager<PluginType>::closeLibrary(const std::string&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.cpp:140:51: warning: NULL used in arithmetic [-Wpointer-arith]
  140 |     bool result = dlclose(libHandles[libName]) == NULL;
      |                                                   ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.cpp: In instantiation of ‘void CompuCell3D::PluginManager<PluginType>::closeLibrary(const std::string&) [with PluginType = CompuCell3D::Plugin; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.cpp:186:20:   required from here
  186 | class CompuCell3D::PluginManager<Plugin>;
      |                    ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.cpp:140:48: warning: NULL used in arithmetic [-Wpointer-arith]
  140 |     bool result = dlclose(libHandles[libName]) == NULL;
      |                                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.cpp: In instantiation of ‘void CompuCell3D::PluginManager<PluginType>::closeLibrary(const std::string&) [with PluginType = CompuCell3D::Steppable; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.cpp:189:20:   required from here
  189 | class CompuCell3D::PluginManager<Steppable>;
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.cpp:140:48: warning: NULL used in arithmetic [-Wpointer-arith]
  140 |     bool result = dlclose(libHandles[libName]) == NULL;
      |                                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.cpp: In instantiation of ‘void CompuCell3D::PluginManager<PluginType>::closeLibrary(const std::string&) [with PluginType = CompuCell3D::PluginBase; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.cpp:192:20:   required from here
  192 | class CompuCell3D::PluginManager<PluginBase>;
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.cpp:140:48: warning: NULL used in arithmetic [-Wpointer-arith]
  140 |     bool result = dlclose(libHandles[libName]) == NULL;
      |                                                ^
[69/395] /usr/bin/g++ -DCompuCellLibShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/CC3DExceptions.cpp.o -MF core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/CC3DExceptions.cpp.o.d -o core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/CC3DExceptions.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3DExceptions.cpp
[70/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9 core/CompuCell3D/Automaton/libCC3DAutomaton.so && :
[71/395] /usr/bin/g++ -DCompuCellLibShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/ExtraMembers.cpp.o -MF core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/ExtraMembers.cpp.o.d -o core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/ExtraMembers.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
[72/395] /usr/bin/g++ -DNeighborTrackerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/NeighborTracker/CMakeFiles/NeighborTrackerShared.dir/NeighborTrackerPluginProxy.cpp.o -MF core/CompuCell3D/plugins/NeighborTracker/CMakeFiles/NeighborTrackerShared.dir/NeighborTrackerPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/NeighborTracker/CMakeFiles/NeighborTrackerShared.dir/NeighborTrackerPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[73/395] /usr/bin/g++ -DCompuCellLibShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/Simulator.cpp.o -MF core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/Simulator.cpp.o.d -o core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/Simulator.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.cpp:12:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /usr/include/c++/16/bits/locale_classes.h:43,
                 from /usr/include/c++/16/bits/ios_base.h:43,
                 from /usr/include/c++/16/ios:46,
                 from /usr/include/c++/16/bits/ostream.h:43,
                 from /usr/include/c++/16/ostream:42,
                 from /usr/include/c++/16/iostream:43,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3DExceptions.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ClassRegistry.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.cpp:3:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:33,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.cpp:35:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.cpp:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Steppable.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ClassRegistry.h:6:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.cpp: In destructor ‘virtual CompuCell3D::Simulator::~Simulator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.cpp:77:5: warning: deleting object of polymorphic class type ‘CompuCell3D::ParallelUtilsOpenMP’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
   77 |     delete pUtils;
      |     ^~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.cpp:78:5: warning: deleting object of polymorphic class type ‘CompuCell3D::ParallelUtilsOpenMP’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
   78 |     delete pUtilsSingle;
      |     ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.cpp: In member function ‘virtual void CompuCell3D::Simulator::start()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.cpp:458:20: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else]
  458 |                 if (it != infos->begin()) CC3D_Log(LOG_DEBUG) << ",";
      |                    ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.cpp: In member function ‘void CompuCell3D::Simulator::initializePottsCC3D(CC3DXMLElement*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.cpp:855:28: warning: unused variable ‘rand’ [-Wunused-variable]
  855 |     RandomNumberGenerator *rand = rngFactory.getInstance(randomSeed);
      |                            ^~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = float; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.cpp:223:52:   required from here
  223 |                                                    );
      |                                                    ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<float>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<float>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = float]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:150:22:   required from here
  150 |         virtual bool isValid(const Point3D &pt) const {
      |                      ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:12:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::VectorNumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = float]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:140:22:   required from here
  140 |         virtual bool isValid(const Point3D &pt) const {
      |                      ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:141:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  141 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:142:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  142 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:143:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  143 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
[74/395] /usr/bin/g++ -DNeighborTrackerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/NeighborTracker/CMakeFiles/NeighborTrackerShared.dir/NeighborTrackerPlugin.cpp.o -MF core/CompuCell3D/plugins/NeighborTracker/CMakeFiles/NeighborTrackerShared.dir/NeighborTrackerPlugin.cpp.o.d -o core/CompuCell3D/plugins/NeighborTracker/CMakeFiles/NeighborTrackerShared.dir/NeighborTrackerPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.cpp:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.h: In constructor ‘CompuCell3D::NeighborTrackerPlugin::NeighborTrackerPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.h:78:14: warning: ‘CompuCell3D::NeighborTrackerPlugin::changeCounter’ will be initialized after [-Wreorder]
   78 |         long changeCounter;
      |              ^~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.h:34:14: warning:   ‘bool CompuCell3D::NeighborTrackerPlugin::periodicX’ [-Wreorder]
   34 |         bool periodicX, periodicY, periodicZ;
      |              ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.cpp:9:1: warning:   when initialized here [-Wreorder]
    9 | NeighborTrackerPlugin::NeighborTrackerPlugin() :
      | ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.cpp: In member function ‘virtual void CompuCell3D::NeighborTrackerPlugin::field3DChange(const CompuCell3D::Point3D&, CompuCell3D::CellG*, CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.cpp:135:14: warning: unused variable ‘temp_index’ [-Wunused-variable]
  135 |         long temp_index;
      |              ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.cpp:96:10: warning: unused variable ‘adjNeighborIndex’ [-Wunused-variable]
   96 |     long adjNeighborIndex = 0;
      |          ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.cpp:97:10: warning: unused variable ‘adjFace2FaceNeighborIndex’ [-Wunused-variable]
   97 |     long adjFace2FaceNeighborIndex = 0;
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.cpp:99:12: warning: variable ‘currentCellPtr’ set but not used [-Wunused-but-set-variable=]
   99 |     CellG *currentCellPtr = 0;
      |            ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.cpp:102:18: warning: variable ‘token’ set but not used [-Wunused-but-set-variable=]
  102 |     unsigned int token = 0;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.cpp:103:12: warning: variable ‘distance’ set but not used [-Wunused-but-set-variable=]
  103 |     double distance;
      |            ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.cpp:104:9: warning: unused variable ‘oldDiff’ [-Wunused-variable]
  104 |     int oldDiff = 0;
      |         ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.cpp:105:9: warning: unused variable ‘newDiff’ [-Wunused-variable]
  105 |     int newDiff = 0;
      |         ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.cpp:108:12: warning: unused variable ‘nCell’ [-Wunused-variable]
  108 |     CellG *nCell = 0;
      |            ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.cpp: In member function ‘virtual void CompuCell3D::NeighborTrackerPlugin::testLatticeSanityFull()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.cpp:345:18: warning: variable ‘token’ set but not used [-Wunused-but-set-variable=]
  345 |     unsigned int token = 0;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.cpp:346:12: warning: variable ‘distance’ set but not used [-Wunused-but-set-variable=]
  346 |     double distance;
      |            ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.cpp: In member function ‘bool CompuCell3D::NeighborTrackerPlugin::isBoundaryPixel(CompuCell3D::Point3D)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.cpp:446:18: warning: unused variable ‘token’ [-Wunused-variable]
  446 |     unsigned int token = 0;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.cpp:447:12: warning: unused variable ‘distance’ [-Wunused-variable]
  447 |     double distance = 0;
      |            ^~~~~~~~
[75/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/link.d -Wl,-soname,libCC3DPotts3D.so.4.9 -o core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0 core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/AttributeAdder.cpp.o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/Cell.cpp.o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/CellInventory.cpp.o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/DefaultAcceptanceFunction.cpp.o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/CustomAcceptanceFunction.cpp.o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/EnergyFunctionCalculator.cpp.o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/EnergyFunctionCalculatorStatistics.cpp.o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/EnergyFunctionCalculatorTestDataGeneration.cpp.o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/TypeTransition.cpp.o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/StandardFluctuationAmplitudeFunctions.cpp.o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/Potts3D.cpp.o core/CompuCell3D/Potts3D/CMakeFiles/Potts3DShared.dir/PottsTestData.cpp.o  -Wl,-rpath,"\$ORIGIN/../../muParser/ExpressionEvaluator:\$ORIGIN/../../muParser:\$ORIGIN/../../XMLUtils:\$ORIGIN/../../PublicUtilities:\$ORIGIN/../Boundary:\$ORIGIN/../Field3D:\$ORIGIN/../../Logger:"  -lgomp  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[76/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9 core/CompuCell3D/Potts3D/libCC3DPotts3D.so && :
[77/395] /usr/bin/g++ -DFocalPointPlasticityShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityLinkInventory.cpp.o -MF core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityLinkInventory.cpp.o.d -o core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityLinkInventory.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventory.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventory.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventory.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/bits/hashtable_policy.h:37,
                 from /usr/include/c++/16/bits/hashtable.h:37,
                 from /usr/include/c++/16/bits/unordered_map.h:33,
                 from /usr/include/c++/16/unordered_map:43,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:12,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h:8:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h: In constructor ‘CompuCell3D::FocalPointPlasticityTrackerData::FocalPointPlasticityTrackerData(CompuCell3D::CellG*, float, float, float, int, float, int, bool, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:81:13: warning: ‘CompuCell3D::FocalPointPlasticityTrackerData::anchorId’ will be initialized after [-Wreorder]
   81 |         int anchorId;
      |             ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:78:14: warning:   ‘bool CompuCell3D::FocalPointPlasticityTrackerData::isInitiator’ [-Wreorder]
   78 |         bool isInitiator;
      |              ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:23:9: warning:   when initialized here [-Wreorder]
   23 |         FocalPointPlasticityTrackerData(CellG *_neighborAddress = 0, float _lambdaDistance = 0.0,
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h: In constructor ‘CompuCell3D::FocalPointPlasticityLinkTrackerData::FocalPointPlasticityLinkTrackerData(float, float, float, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:158:13: warning: ‘CompuCell3D::FocalPointPlasticityLinkTrackerData::anchorId’ will be initialized after [-Wreorder]
  158 |         int anchorId;
      |             ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:156:13: warning:   ‘int CompuCell3D::FocalPointPlasticityLinkTrackerData::initMCS’ [-Wreorder]
  156 |         int initMCS;
      |             ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:115:9: warning:   when initialized here [-Wreorder]
  115 |         FocalPointPlasticityLinkTrackerData(float _lambdaDistance = 0.0, float _targetDistance = 0.0,
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h: In constructor ‘CompuCell3D::FocalPointPlasticityLinkBase::FocalPointPlasticityLinkBase()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:50:16: warning: ‘CompuCell3D::FocalPointPlasticityLinkBase::initiated’ will be initialized after [-Wreorder]
   50 |         CellG *initiated;
      |                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:47:18: warning:   ‘CompuCell3D::Potts3D* CompuCell3D::FocalPointPlasticityLinkBase::potts’ [-Wreorder]
   47 |         Potts3D *potts;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:61:9: warning:   when initialized here [-Wreorder]
   61 |         FocalPointPlasticityLinkBase() :
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
[78/395] /usr/bin/g++ -DFocalPointPlasticityShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityLinkInventoryBase.cpp.o -MF core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityLinkInventoryBase.cpp.o.d -o core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityLinkInventoryBase.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/bits/hashtable_policy.h:37,
                 from /usr/include/c++/16/bits/hashtable.h:37,
                 from /usr/include/c++/16/bits/unordered_map.h:33,
                 from /usr/include/c++/16/unordered_map:43,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:12,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h:8:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h: In constructor ‘CompuCell3D::FocalPointPlasticityTrackerData::FocalPointPlasticityTrackerData(CompuCell3D::CellG*, float, float, float, int, float, int, bool, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:81:13: warning: ‘CompuCell3D::FocalPointPlasticityTrackerData::anchorId’ will be initialized after [-Wreorder]
   81 |         int anchorId;
      |             ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:78:14: warning:   ‘bool CompuCell3D::FocalPointPlasticityTrackerData::isInitiator’ [-Wreorder]
   78 |         bool isInitiator;
      |              ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:23:9: warning:   when initialized here [-Wreorder]
   23 |         FocalPointPlasticityTrackerData(CellG *_neighborAddress = 0, float _lambdaDistance = 0.0,
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h: In constructor ‘CompuCell3D::FocalPointPlasticityLinkTrackerData::FocalPointPlasticityLinkTrackerData(float, float, float, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:158:13: warning: ‘CompuCell3D::FocalPointPlasticityLinkTrackerData::anchorId’ will be initialized after [-Wreorder]
  158 |         int anchorId;
      |             ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:156:13: warning:   ‘int CompuCell3D::FocalPointPlasticityLinkTrackerData::initMCS’ [-Wreorder]
  156 |         int initMCS;
      |             ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:115:9: warning:   when initialized here [-Wreorder]
  115 |         FocalPointPlasticityLinkTrackerData(float _lambdaDistance = 0.0, float _targetDistance = 0.0,
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h: In constructor ‘CompuCell3D::FocalPointPlasticityLinkBase::FocalPointPlasticityLinkBase()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:50:16: warning: ‘CompuCell3D::FocalPointPlasticityLinkBase::initiated’ will be initialized after [-Wreorder]
   50 |         CellG *initiated;
      |                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:47:18: warning:   ‘CompuCell3D::Potts3D* CompuCell3D::FocalPointPlasticityLinkBase::potts’ [-Wreorder]
   47 |         Potts3D *potts;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:61:9: warning:   when initialized here [-Wreorder]
   61 |         FocalPointPlasticityLinkBase() :
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
[79/395] /usr/bin/g++ -DFocalPointPlasticityShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityLinks.cpp.o -MF core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityLinks.cpp.o.d -o core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityLinks.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:12,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h: In constructor ‘CompuCell3D::FocalPointPlasticityTrackerData::FocalPointPlasticityTrackerData(CompuCell3D::CellG*, float, float, float, int, float, int, bool, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:81:13: warning: ‘CompuCell3D::FocalPointPlasticityTrackerData::anchorId’ will be initialized after [-Wreorder]
   81 |         int anchorId;
      |             ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:78:14: warning:   ‘bool CompuCell3D::FocalPointPlasticityTrackerData::isInitiator’ [-Wreorder]
   78 |         bool isInitiator;
      |              ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:23:9: warning:   when initialized here [-Wreorder]
   23 |         FocalPointPlasticityTrackerData(CellG *_neighborAddress = 0, float _lambdaDistance = 0.0,
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h: In constructor ‘CompuCell3D::FocalPointPlasticityLinkTrackerData::FocalPointPlasticityLinkTrackerData(float, float, float, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:158:13: warning: ‘CompuCell3D::FocalPointPlasticityLinkTrackerData::anchorId’ will be initialized after [-Wreorder]
  158 |         int anchorId;
      |             ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:156:13: warning:   ‘int CompuCell3D::FocalPointPlasticityLinkTrackerData::initMCS’ [-Wreorder]
  156 |         int initMCS;
      |             ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:115:9: warning:   when initialized here [-Wreorder]
  115 |         FocalPointPlasticityLinkTrackerData(float _lambdaDistance = 0.0, float _targetDistance = 0.0,
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h: In constructor ‘CompuCell3D::FocalPointPlasticityLinkBase::FocalPointPlasticityLinkBase()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:50:16: warning: ‘CompuCell3D::FocalPointPlasticityLinkBase::initiated’ will be initialized after [-Wreorder]
   50 |         CellG *initiated;
      |                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:47:18: warning:   ‘CompuCell3D::Potts3D* CompuCell3D::FocalPointPlasticityLinkBase::potts’ [-Wreorder]
   47 |         Potts3D *potts;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:61:9: warning:   when initialized here [-Wreorder]
   61 |         FocalPointPlasticityLinkBase() :
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
[80/395] /usr/bin/g++ -DFocalPointPlasticityShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityTracker.cpp.o -MF core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityTracker.cpp.o.d -o core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityTracker.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:12,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h: In constructor ‘CompuCell3D::FocalPointPlasticityTrackerData::FocalPointPlasticityTrackerData(CompuCell3D::CellG*, float, float, float, int, float, int, bool, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:81:13: warning: ‘CompuCell3D::FocalPointPlasticityTrackerData::anchorId’ will be initialized after [-Wreorder]
   81 |         int anchorId;
      |             ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:78:14: warning:   ‘bool CompuCell3D::FocalPointPlasticityTrackerData::isInitiator’ [-Wreorder]
   78 |         bool isInitiator;
      |              ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:23:9: warning:   when initialized here [-Wreorder]
   23 |         FocalPointPlasticityTrackerData(CellG *_neighborAddress = 0, float _lambdaDistance = 0.0,
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h: In constructor ‘CompuCell3D::FocalPointPlasticityLinkTrackerData::FocalPointPlasticityLinkTrackerData(float, float, float, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:158:13: warning: ‘CompuCell3D::FocalPointPlasticityLinkTrackerData::anchorId’ will be initialized after [-Wreorder]
  158 |         int anchorId;
      |             ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:156:13: warning:   ‘int CompuCell3D::FocalPointPlasticityLinkTrackerData::initMCS’ [-Wreorder]
  156 |         int initMCS;
      |             ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:115:9: warning:   when initialized here [-Wreorder]
  115 |         FocalPointPlasticityLinkTrackerData(float _lambdaDistance = 0.0, float _targetDistance = 0.0,
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[81/395] /usr/bin/g++ -DFocalPointPlasticityShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityPluginProxy.cpp.o -MF core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPluginProxy.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:12,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h:8,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventory.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.h:5:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h: In constructor ‘CompuCell3D::FocalPointPlasticityTrackerData::FocalPointPlasticityTrackerData(CompuCell3D::CellG*, float, float, float, int, float, int, bool, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:81:13: warning: ‘CompuCell3D::FocalPointPlasticityTrackerData::anchorId’ will be initialized after [-Wreorder]
   81 |         int anchorId;
      |             ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:78:14: warning:   ‘bool CompuCell3D::FocalPointPlasticityTrackerData::isInitiator’ [-Wreorder]
   78 |         bool isInitiator;
      |              ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:23:9: warning:   when initialized here [-Wreorder]
   23 |         FocalPointPlasticityTrackerData(CellG *_neighborAddress = 0, float _lambdaDistance = 0.0,
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h: In constructor ‘CompuCell3D::FocalPointPlasticityLinkTrackerData::FocalPointPlasticityLinkTrackerData(float, float, float, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:158:13: warning: ‘CompuCell3D::FocalPointPlasticityLinkTrackerData::anchorId’ will be initialized after [-Wreorder]
  158 |         int anchorId;
      |             ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:156:13: warning:   ‘int CompuCell3D::FocalPointPlasticityLinkTrackerData::initMCS’ [-Wreorder]
  156 |         int initMCS;
      |             ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:115:9: warning:   when initialized here [-Wreorder]
  115 |         FocalPointPlasticityLinkTrackerData(float _lambdaDistance = 0.0, float _targetDistance = 0.0,
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h: In constructor ‘CompuCell3D::FocalPointPlasticityLinkBase::FocalPointPlasticityLinkBase()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:50:16: warning: ‘CompuCell3D::FocalPointPlasticityLinkBase::initiated’ will be initialized after [-Wreorder]
   50 |         CellG *initiated;
      |                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:47:18: warning:   ‘CompuCell3D::Potts3D* CompuCell3D::FocalPointPlasticityLinkBase::potts’ [-Wreorder]
   47 |         Potts3D *potts;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:61:9: warning:   when initialized here [-Wreorder]
   61 |         FocalPointPlasticityLinkBase() :
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
[82/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/link.d -Wl,-soname,libCC3DCompuCellLib.so.4.9 -o core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0 core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/PluginInfo.cpp.o core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/PluginManager.cpp.o core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/Simulator.cpp.o core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/ClassRegistry.cpp.o core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/DerivedProperty.cpp.o core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/RandomNumberGenerators.cpp.o core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/PottsParseData.cpp.o core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/ParserStorage.cpp.o core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/CC3DExceptions.cpp.o core/CompuCell3D/CMakeFiles/CompuCellLibShared.dir/ExtraMembers.cpp.o  -Wl,-rpath,"\$ORIGIN/Automaton:\$ORIGIN/Potts3D:\$ORIGIN/../muParser/ExpressionEvaluator:\$ORIGIN/../XMLUtils:\$ORIGIN/../PublicUtilities:\$ORIGIN/Boundary:\$ORIGIN/Field3D:\$ORIGIN/../Logger:\$ORIGIN/../muParser:"  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -ldl  -lgomp  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a  core/muParser/libCC3DmuParser.so.4.9.0 && :
[83/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/libCC3DCompuCellLib.so.4.9 core/CompuCell3D/libCC3DCompuCellLib.so && :
[84/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/NeighborTracker/CMakeFiles/NeighborTrackerShared.dir/link.d -Wl,-soname,libCC3DNeighborTracker.so.4.9 -o core/CompuCell3D/plugins/NeighborTracker/libCC3DNeighborTracker.so.4.9.0 core/CompuCell3D/plugins/NeighborTracker/CMakeFiles/NeighborTrackerShared.dir/NeighborTrackerPlugin.cpp.o core/CompuCell3D/plugins/NeighborTracker/CMakeFiles/NeighborTrackerShared.dir/NeighborTrackerPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[85/395] /usr/bin/g++ -DPixelTrackerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/PixelTracker/CMakeFiles/PixelTrackerShared.dir/PixelTrackerPluginProxy.cpp.o -MF core/CompuCell3D/plugins/PixelTracker/CMakeFiles/PixelTrackerShared.dir/PixelTrackerPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/PixelTracker/CMakeFiles/PixelTrackerShared.dir/PixelTrackerPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PixelTracker/PixelTrackerPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PixelTracker/PixelTrackerPlugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PixelTracker/PixelTrackerPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[86/395] /usr/bin/g++ -DPixelTrackerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/PixelTracker/CMakeFiles/PixelTrackerShared.dir/PixelTrackerPlugin.cpp.o -MF core/CompuCell3D/plugins/PixelTracker/CMakeFiles/PixelTrackerShared.dir/PixelTrackerPlugin.cpp.o.d -o core/CompuCell3D/plugins/PixelTracker/CMakeFiles/PixelTrackerShared.dir/PixelTrackerPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PixelTracker/PixelTrackerPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PixelTracker/PixelTrackerPlugin.cpp:4:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PixelTracker/PixelTrackerPlugin.cpp:3:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PixelTracker/PixelTrackerPlugin.cpp: In member function ‘virtual void CompuCell3D::PixelTrackerPlugin::field3DChange(const CompuCell3D::Point3D&, CompuCell3D::CellG*, CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PixelTracker/PixelTrackerPlugin.cpp:75:46: warning: variable ‘sitr’ set but not used [-Wunused-but-set-variable=]
   75 |         std::set<PixelTrackerData>::iterator sitr = pixelSetRef.find(PixelTrackerData(pt));
      |                                              ^~~~
[87/395] /usr/bin/g++ -DClusterSurfaceTrackerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/ClusterSurfaceTracker/CMakeFiles/ClusterSurfaceTrackerShared.dir/ClusterSurfaceTrackerPlugin.cpp.o -MF core/CompuCell3D/plugins/ClusterSurfaceTracker/CMakeFiles/ClusterSurfaceTrackerShared.dir/ClusterSurfaceTrackerPlugin.cpp.o.d -o core/CompuCell3D/plugins/ClusterSurfaceTracker/CMakeFiles/ClusterSurfaceTrackerShared.dir/ClusterSurfaceTrackerPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerPlugin.cpp:6:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerPlugin.h: In constructor ‘CompuCell3D::ClusterSurfaceTrackerPlugin::ClusterSurfaceTrackerPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerPlugin.h:49:44: warning: ‘CompuCell3D::ClusterSurfaceTrackerPlugin::lockPtr’ will be initialized after [-Wreorder]
   49 |         ParallelUtilsOpenMP::OpenMPLock_t *lockPtr;
      |                                            ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerPlugin.h:41:25: warning:   ‘CC3DXMLElement* CompuCell3D::ClusterSurfaceTrackerPlugin::xmlData’ [-Wreorder]
   41 |         CC3DXMLElement *xmlData;
      |                         ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerPlugin.cpp:11:1: warning:   when initialized here [-Wreorder]
   11 | ClusterSurfaceTrackerPlugin::ClusterSurfaceTrackerPlugin() :
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerPlugin.cpp: In member function ‘virtual void CompuCell3D::ClusterSurfaceTrackerPlugin::field3DChange(const CompuCell3D::Point3D&, CompuCell3D::CellG*, CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerPlugin.cpp:103:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::CellG*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  103 |         for (int i = 0; i < compartments.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerPlugin.cpp:111:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::CellG*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  111 |         for (int i = 0; i < compartments.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerPlugin.cpp:122:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::CellG*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  122 |         for (int i = 0; i < compartments.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerPlugin.cpp:129:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::CellG*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  129 |         for (int i = 0; i < compartments.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerPlugin.cpp:70:18: warning: unused variable ‘token’ [-Wunused-variable]
   70 |     unsigned int token = 0;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerPlugin.cpp:71:12: warning: unused variable ‘distance’ [-Wunused-variable]
   71 |     double distance;
      |            ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerPlugin.cpp: In member function ‘void CompuCell3D::ClusterSurfaceTrackerPlugin::updateClusterSurface(long int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerPlugin.cpp:142:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::CellG*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  142 |     for (int i = 0; i < compartments.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerPlugin.cpp:165:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::CellG*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  165 |     for (int i = 0; i < compartments.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~
[88/395] /usr/bin/g++ -DClusterSurfaceTrackerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/ClusterSurfaceTracker/CMakeFiles/ClusterSurfaceTrackerShared.dir/ClusterSurfaceTrackerPluginProxy.cpp.o -MF core/CompuCell3D/plugins/ClusterSurfaceTracker/CMakeFiles/ClusterSurfaceTrackerShared.dir/ClusterSurfaceTrackerPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/ClusterSurfaceTracker/CMakeFiles/ClusterSurfaceTrackerShared.dir/ClusterSurfaceTrackerPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerPlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerPluginProxy.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[89/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/PixelTracker/CMakeFiles/PixelTrackerShared.dir/link.d -Wl,-soname,libCC3DPixelTracker.so.4.9 -o core/CompuCell3D/plugins/PixelTracker/libCC3DPixelTracker.so.4.9.0 core/CompuCell3D/plugins/PixelTracker/CMakeFiles/PixelTrackerShared.dir/PixelTrackerPlugin.cpp.o core/CompuCell3D/plugins/PixelTracker/CMakeFiles/PixelTrackerShared.dir/PixelTrackerPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[90/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/NeighborTracker/libCC3DNeighborTracker.so.4.9.0  core/CompuCell3D/plugins/NeighborTracker/libCC3DNeighborTracker.so.4.9 core/CompuCell3D/plugins/NeighborTracker/libCC3DNeighborTracker.so && :
[91/395] /usr/bin/g++ -DCellTypeShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/CellType/CMakeFiles/CellTypeShared.dir/CellTypePluginProxy.cpp.o -MF core/CompuCell3D/plugins/CellType/CMakeFiles/CellTypeShared.dir/CellTypePluginProxy.cpp.o.d -o core/CompuCell3D/plugins/CellType/CMakeFiles/CellTypeShared.dir/CellTypePluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellType/CellTypePluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellType/CellTypePlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellType/CellTypePluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[92/395] /usr/bin/g++ -DFocalPointPlasticityShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityPlugin.cpp.o -MF core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityPlugin.cpp.o.d -o core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:12,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h:8,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventory.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:6:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h: In constructor ‘CompuCell3D::FocalPointPlasticityTrackerData::FocalPointPlasticityTrackerData(CompuCell3D::CellG*, float, float, float, int, float, int, bool, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:81:13: warning: ‘CompuCell3D::FocalPointPlasticityTrackerData::anchorId’ will be initialized after [-Wreorder]
   81 |         int anchorId;
      |             ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:78:14: warning:   ‘bool CompuCell3D::FocalPointPlasticityTrackerData::isInitiator’ [-Wreorder]
   78 |         bool isInitiator;
      |              ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:23:9: warning:   when initialized here [-Wreorder]
   23 |         FocalPointPlasticityTrackerData(CellG *_neighborAddress = 0, float _lambdaDistance = 0.0,
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h: In constructor ‘CompuCell3D::FocalPointPlasticityLinkTrackerData::FocalPointPlasticityLinkTrackerData(float, float, float, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:158:13: warning: ‘CompuCell3D::FocalPointPlasticityLinkTrackerData::anchorId’ will be initialized after [-Wreorder]
  158 |         int anchorId;
      |             ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:156:13: warning:   ‘int CompuCell3D::FocalPointPlasticityLinkTrackerData::initMCS’ [-Wreorder]
  156 |         int initMCS;
      |             ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:115:9: warning:   when initialized here [-Wreorder]
  115 |         FocalPointPlasticityLinkTrackerData(float _lambdaDistance = 0.0, float _targetDistance = 0.0,
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h: In constructor ‘CompuCell3D::FocalPointPlasticityLinkBase::FocalPointPlasticityLinkBase()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:50:16: warning: ‘CompuCell3D::FocalPointPlasticityLinkBase::initiated’ will be initialized after [-Wreorder]
   50 |         CellG *initiated;
      |                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:47:18: warning:   ‘CompuCell3D::Potts3D* CompuCell3D::FocalPointPlasticityLinkBase::potts’ [-Wreorder]
   47 |         Potts3D *potts;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:61:9: warning:   when initialized here [-Wreorder]
   61 |         FocalPointPlasticityLinkBase() :
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp: In member function ‘virtual void CompuCell3D::FocalPointPlasticityPlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:161:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  161 |     for (int i = 0; i < internalPlastParamVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp: In member function ‘void CompuCell3D::FocalPointPlasticityPlugin::insertAnchorFPPData(CompuCell3D::CellG*, CompuCell3D::FocalPointPlasticityTrackerData*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:361:9: warning: unused variable ‘anchorId’ [-Wunused-variable]
  361 |     int anchorId = _fpptd->anchorId;
      |         ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp: In member function ‘double CompuCell3D::FocalPointPlasticityPlugin::tryAddingNewJunction(const CompuCell3D::Point3D&, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:434:38: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  434 |     for (unsigned int nIdx = 0; nIdx <= maxNeighborIndexLocal; ++nIdx) randNeighborIndex[nIdx] = nIdx;
      |                                 ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:438:28: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<unsigned int*, vector<unsigned int> >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations]
  438 |         std::random_shuffle(randNeighborIndex.begin(), randNeighborIndex.end());
      |         ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/16/algorithm:63,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:18:
/usr/include/c++/16/bits/stl_algo.h:4511:5: note: declared here
 4511 |     random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last)
      |     ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:441:38: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  441 |     for (unsigned int nIdx = 0; nIdx <= maxNeighborIndexLocal; ++nIdx) {
      |                                 ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp: In member function ‘double CompuCell3D::FocalPointPlasticityPlugin::tryAddingNewJunctionWithinCluster(const CompuCell3D::Point3D&, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:524:38: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  524 |     for (unsigned int nIdx = 0; nIdx <= maxNeighborIndexLocal; ++nIdx) randNeighborIndex[nIdx] = nIdx;
      |                                 ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:525:24: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<unsigned int*, vector<unsigned int> >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations]
  525 |     std::random_shuffle(randNeighborIndex.begin(), randNeighborIndex.end());
      |     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/bits/stl_algo.h:4511:5: note: declared here
 4511 |     random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last)
      |     ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:527:38: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  527 |     for (unsigned int nIdx = 0; nIdx <= maxNeighborIndexLocal; ++nIdx) {
      |                                 ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp: In member function ‘virtual double CompuCell3D::FocalPointPlasticityPlugin::changeEnergy(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:598:35: warning: unused variable ‘fieldG’ [-Wunused-variable]
  598 |     WatchableField3D < CellG * > *fieldG = (WatchableField3D < CellG * > *)
      |                                   ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h: In instantiation of ‘void CompuCell3D::FPPLinkInventoryBase<LinkType>::removeFromInventory(LinkType*) [with LinkType = CompuCell3D::FocalPointPlasticityLink]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:818:42:   required from here
  818 |     if (link) linkInv.removeFromInventory(link);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h:169:13: warning: deleting object of polymorphic class type ‘CompuCell3D::FocalPointPlasticityLink’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
  169 |             delete _link;
      |             ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h: In instantiation of ‘void CompuCell3D::FPPLinkInventoryBase<LinkType>::removeFromInventory(LinkType*) [with LinkType = CompuCell3D::FocalPointPlasticityInternalLink]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:825:50:   required from here
  825 |     if (link) linkInvInternal.removeFromInventory(link);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h:169:13: warning: deleting object of polymorphic class type ‘CompuCell3D::FocalPointPlasticityInternalLink’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
  169 |             delete _link;
      |             ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h: In instantiation of ‘void CompuCell3D::FPPLinkInventoryBase<LinkType>::removeFromInventory(LinkType*) [with LinkType = CompuCell3D::FocalPointPlasticityAnchor]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:1189:48:   required from here
 1189 |     if (link) linkInvAnchor.removeFromInventory(link);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h:169:13: warning: deleting object of polymorphic class type ‘CompuCell3D::FocalPointPlasticityAnchor’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
  169 |             delete _link;
      |             ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp: In member function ‘CompuCell3D::FocalPointPlasticityPlugin::field3DChange(CompuCell3D::Point3D const&, CompuCell3D::CellG*, CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:978:30: warning: ‘maxDistanceLocal’ may be used uninitialized [-Wmaybe-uninitialized]
  978 |                 if (distance > maxDistanceLocal) {
      |                     ~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:971:21: note: ‘maxDistanceLocal’ was declared here
  971 |                 int maxDistanceLocal;
      |                     ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:1002:34: warning: ‘maxDistanceLocal’ may be used uninitialized [-Wmaybe-uninitialized]
 1002 |                     if (distance > maxDistanceLocal) {
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:995:25: note: ‘maxDistanceLocal’ was declared here
  995 |                     int maxDistanceLocal;
      |                         ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:1029:30: warning: ‘maxDistanceLocal’ may be used uninitialized [-Wmaybe-uninitialized]
 1029 |                 if (distance > maxDistanceLocal) {
      |                     ~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:1022:21: note: ‘maxDistanceLocal’ was declared here
 1022 |                 int maxDistanceLocal;
      |                     ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:1061:30: warning: ‘maxDistanceLocal’ may be used uninitialized [-Wmaybe-uninitialized]
 1061 |                 if (distance > maxDistanceLocal) {
      |                     ~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:1054:21: note: ‘maxDistanceLocal’ was declared here
 1054 |                 int maxDistanceLocal;
      |                     ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:1086:34: warning: ‘maxDistanceLocal’ may be used uninitialized [-Wmaybe-uninitialized]
 1086 |                     if (distance > maxDistanceLocal) {
      |                         ~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:1079:25: note: ‘maxDistanceLocal’ was declared here
 1079 |                     int maxDistanceLocal;
      |                         ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:1115:30: warning: ‘maxDistanceLocal’ may be used uninitialized [-Wmaybe-uninitialized]
 1115 |                 if (distance > maxDistanceLocal) {
      |                     ~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.cpp:1108:21: note: ‘maxDistanceLocal’ was declared here
 1108 |                 int maxDistanceLocal;
      |                     ^~~~~~~~~~~~~~~~
[93/395] /usr/bin/g++ -DCellTypeShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/CellType/CMakeFiles/CellTypeShared.dir/CellTypePlugin.cpp.o -MF core/CompuCell3D/plugins/CellType/CMakeFiles/CellTypeShared.dir/CellTypePlugin.cpp.o.d -o core/CompuCell3D/plugins/CellType/CMakeFiles/CellTypeShared.dir/CellTypePlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellType/CellTypePlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellType/CellTypePlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellType/CellTypePlugin.cpp: In member function ‘virtual void CompuCell3D::CellTypePlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellType/CellTypePlugin.cpp:62:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   62 |     for (int i = 0; i < cellTypeVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~
[94/395] /usr/bin/g++ -DElasticityTrackerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/ElasticityTracker/CMakeFiles/ElasticityTrackerShared.dir/ElasticityTrackerPlugin.cpp.o -MF core/CompuCell3D/plugins/ElasticityTracker/CMakeFiles/ElasticityTrackerShared.dir/ElasticityTrackerPlugin.cpp.o.d -o core/CompuCell3D/plugins/ElasticityTracker/CMakeFiles/ElasticityTrackerShared.dir/ElasticityTrackerPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ElasticityTracker/ElasticityTrackerPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ElasticityTracker/ElasticityTrackerPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ElasticityTracker/ElasticityTrackerPlugin.cpp:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ElasticityTracker/ElasticityTrackerPlugin.h: In constructor ‘CompuCell3D::ElasticityTrackerPlugin::ElasticityTrackerPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ElasticityTracker/ElasticityTrackerPlugin.h:40:14: warning: ‘CompuCell3D::ElasticityTrackerPlugin::manualInit’ will be initialized after [-Wreorder]
   40 |         bool manualInit;
      |              ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ElasticityTracker/ElasticityTrackerPlugin.h:39:25: warning:   ‘CC3DXMLElement* CompuCell3D::ElasticityTrackerPlugin::xmlData’ [-Wreorder]
   39 |         CC3DXMLElement *xmlData;
      |                         ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ElasticityTracker/ElasticityTrackerPlugin.cpp:10:1: warning:   when initialized here [-Wreorder]
   10 | ElasticityTrackerPlugin::ElasticityTrackerPlugin() :
      | ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ElasticityTracker/ElasticityTrackerPlugin.cpp: In member function ‘virtual void CompuCell3D::ElasticityTrackerPlugin::extraInit(CompuCell3D::Simulator*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ElasticityTracker/ElasticityTrackerPlugin.cpp:76:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   76 |     for (int i = 0; i < includeTypeNamesXMLVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ElasticityTracker/ElasticityTrackerPlugin.cpp: In member function ‘void CompuCell3D::ElasticityTrackerPlugin::initializeElasticityNeighborList()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ElasticityTracker/ElasticityTrackerPlugin.cpp:143:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘short int’ [-Wsign-compare]
  143 |     for (unsigned int x = 0; x < fieldDim.x; ++x)
      |                              ~~^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ElasticityTracker/ElasticityTrackerPlugin.cpp:144:36: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘short int’ [-Wsign-compare]
  144 |         for (unsigned int y = 0; y < fieldDim.y; ++y)
      |                                  ~~^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ElasticityTracker/ElasticityTrackerPlugin.cpp:145:40: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘short int’ [-Wsign-compare]
  145 |             for (unsigned int z = 0; z < fieldDim.z; ++z) {
      |                                      ~~^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ElasticityTracker/ElasticityTrackerPlugin.cpp: In member function ‘CompuCell3D::ElasticityTrackerData* CompuCell3D::ElasticityTrackerPlugin::findTrackerData(CompuCell3D::CellG*, CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ElasticityTracker/ElasticityTrackerPlugin.cpp:236:1: warning: control reaches end of non-void function [-Wreturn-type]
  236 | }
      | ^
[95/395] /usr/bin/g++ -DElasticityTrackerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/ElasticityTracker/CMakeFiles/ElasticityTrackerShared.dir/ElasticityTrackerPluginProxy.cpp.o -MF core/CompuCell3D/plugins/ElasticityTracker/CMakeFiles/ElasticityTrackerShared.dir/ElasticityTrackerPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/ElasticityTracker/CMakeFiles/ElasticityTrackerShared.dir/ElasticityTrackerPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ElasticityTracker/ElasticityTrackerPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ElasticityTracker/ElasticityTrackerPlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ElasticityTracker/ElasticityTrackerPluginProxy.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[96/395] /usr/bin/g++ -DPlasticityTrackerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/PlasticityTracker/CMakeFiles/PlasticityTrackerShared.dir/PlasticityTrackerPluginProxy.cpp.o -MF core/CompuCell3D/plugins/PlasticityTracker/CMakeFiles/PlasticityTrackerShared.dir/PlasticityTrackerPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/PlasticityTracker/CMakeFiles/PlasticityTrackerShared.dir/PlasticityTrackerPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PlasticityTracker/PlasticityTrackerPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PlasticityTracker/PlasticityTrackerPlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PlasticityTracker/PlasticityTrackerPluginProxy.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[97/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/link.d -Wl,-soname,libCC3DFocalPointPlasticity.so.4.9 -o core/CompuCell3D/plugins/FocalPointPlasticity/libCC3DFocalPointPlasticity.so.4.9.0 core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityLinkInventory.cpp.o core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityLinkInventoryBase.cpp.o core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityLinks.cpp.o core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityPlugin.cpp.o core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityPluginProxy.cpp.o core/CompuCell3D/plugins/FocalPointPlasticity/CMakeFiles/FocalPointPlasticityShared.dir/FocalPointPlasticityTracker.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[98/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/FocalPointPlasticity/libCC3DFocalPointPlasticity.so.4.9.0  core/CompuCell3D/plugins/FocalPointPlasticity/libCC3DFocalPointPlasticity.so.4.9 core/CompuCell3D/plugins/FocalPointPlasticity/libCC3DFocalPointPlasticity.so && :
[99/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/PixelTracker/libCC3DPixelTracker.so.4.9.0  core/CompuCell3D/plugins/PixelTracker/libCC3DPixelTracker.so.4.9 core/CompuCell3D/plugins/PixelTracker/libCC3DPixelTracker.so && :
[100/395] /usr/bin/g++ -DPlasticityTrackerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/PlasticityTracker/CMakeFiles/PlasticityTrackerShared.dir/PlasticityTrackerPlugin.cpp.o -MF core/CompuCell3D/plugins/PlasticityTracker/CMakeFiles/PlasticityTrackerShared.dir/PlasticityTrackerPlugin.cpp.o.d -o core/CompuCell3D/plugins/PlasticityTracker/CMakeFiles/PlasticityTrackerShared.dir/PlasticityTrackerPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PlasticityTracker/PlasticityTrackerPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PlasticityTracker/PlasticityTrackerPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PlasticityTracker/PlasticityTrackerPlugin.cpp: In member function ‘virtual void CompuCell3D::PlasticityTrackerPlugin::extraInit(CompuCell3D::Simulator*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PlasticityTracker/PlasticityTrackerPlugin.cpp:76:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   76 |     for (int i = 0; i < includeTypeNamesXMLVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PlasticityTracker/PlasticityTrackerPlugin.cpp: In member function ‘virtual void CompuCell3D::PlasticityTrackerPlugin::field3DChange(const CompuCell3D::Point3D&, CompuCell3D::CellG*, CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PlasticityTracker/PlasticityTrackerPlugin.cpp:120:42: warning: variable ‘plasticityNeighborsTmpPtr’ set but not used [-Wunused-but-set-variable=]
  120 |             set <PlasticityTrackerData> *plasticityNeighborsTmpPtr;
      |                                          ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PlasticityTracker/PlasticityTrackerPlugin.cpp:97:35: warning: unused variable ‘fieldG’ [-Wunused-variable]
   97 |     WatchableField3D < CellG * > *fieldG = (WatchableField3D < CellG * > *)
      |                                   ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PlasticityTracker/PlasticityTrackerPlugin.cpp: In member function ‘void CompuCell3D::PlasticityTrackerPlugin::initializePlasticityNeighborList()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PlasticityTracker/PlasticityTrackerPlugin.cpp:201:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘short int’ [-Wsign-compare]
  201 |     for (unsigned int x = 0; x < fieldDim.x; ++x)
      |                              ~~^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PlasticityTracker/PlasticityTrackerPlugin.cpp:202:36: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘short int’ [-Wsign-compare]
  202 |         for (unsigned int y = 0; y < fieldDim.y; ++y)
      |                                  ~~^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PlasticityTracker/PlasticityTrackerPlugin.cpp:203:40: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘short int’ [-Wsign-compare]
  203 |             for (unsigned int z = 0; z < fieldDim.z; ++z) {
      |                                      ~~^~~~~~~~~~~~
[101/395] /usr/bin/g++ -DPolarizationVectorShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/PolarizationVector/CMakeFiles/PolarizationVectorShared.dir/PolarizationVectorPlugin.cpp.o -MF core/CompuCell3D/plugins/PolarizationVector/CMakeFiles/PolarizationVectorShared.dir/PolarizationVectorPlugin.cpp.o.d -o core/CompuCell3D/plugins/PolarizationVector/CMakeFiles/PolarizationVectorShared.dir/PolarizationVectorPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PolarizationVector/PolarizationVectorPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PolarizationVector/PolarizationVectorPlugin.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[102/395] /usr/bin/g++ -DPolarizationVectorShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/PolarizationVector/CMakeFiles/PolarizationVectorShared.dir/PolarizationVectorPluginProxy.cpp.o -MF core/CompuCell3D/plugins/PolarizationVector/CMakeFiles/PolarizationVectorShared.dir/PolarizationVectorPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/PolarizationVector/CMakeFiles/PolarizationVectorShared.dir/PolarizationVectorPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PolarizationVector/PolarizationVectorPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PolarizationVector/PolarizationVectorPlugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PolarizationVector/PolarizationVectorPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[103/395] /usr/bin/g++ -DBoundaryPixelTrackerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/BoundaryPixelTracker/CMakeFiles/BoundaryPixelTrackerShared.dir/BoundaryPixelTrackerPluginProxy.cpp.o -MF core/CompuCell3D/plugins/BoundaryPixelTracker/CMakeFiles/BoundaryPixelTrackerShared.dir/BoundaryPixelTrackerPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/BoundaryPixelTracker/CMakeFiles/BoundaryPixelTrackerShared.dir/BoundaryPixelTrackerPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTrackerPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTrackerPlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTrackerPluginProxy.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[104/395] /usr/bin/g++ -DBoxWatcherShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/BoxWatcher/CMakeFiles/BoxWatcherShared.dir/BoxWatcher.cpp.o -MF core/CompuCell3D/steppables/BoxWatcher/CMakeFiles/BoxWatcherShared.dir/BoxWatcher.cpp.o.d -o core/CompuCell3D/steppables/BoxWatcher/CMakeFiles/BoxWatcherShared.dir/BoxWatcher.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BoxWatcher/BoxWatcher.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BoxWatcher/BoxWatcher.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BoxWatcher/BoxWatcher.cpp: In member function ‘void CompuCell3D::BoxWatcher::adjustBox()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BoxWatcher/BoxWatcher.cpp:106:52: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  106 |     maxCoordinates.x = (maxCoordinates.x + xMargin >= fieldDim.x - 1 ? fieldDim.x : maxCoordinates.x + xMargin + 1);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BoxWatcher/BoxWatcher.cpp:107:52: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  107 |     maxCoordinates.y = (maxCoordinates.y + yMargin >= fieldDim.y - 1 ? fieldDim.y : maxCoordinates.y + yMargin + 1);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BoxWatcher/BoxWatcher.cpp:108:52: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  108 |     maxCoordinates.z = (maxCoordinates.z + zMargin >= fieldDim.z - 1 ? fieldDim.z : maxCoordinates.z + zMargin + 1);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
[105/395] /usr/bin/g++ -DBoxWatcherShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/BoxWatcher/CMakeFiles/BoxWatcherShared.dir/BoxWatcherProxy.cpp.o -MF core/CompuCell3D/steppables/BoxWatcher/CMakeFiles/BoxWatcherShared.dir/BoxWatcherProxy.cpp.o.d -o core/CompuCell3D/steppables/BoxWatcher/CMakeFiles/BoxWatcherShared.dir/BoxWatcherProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BoxWatcher/BoxWatcherProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BoxWatcher/BoxWatcher.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BoxWatcher/BoxWatcherProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[106/395] /usr/bin/g++ -DBoundaryPixelTrackerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/BoundaryPixelTracker/CMakeFiles/BoundaryPixelTrackerShared.dir/BoundaryPixelTrackerPlugin.cpp.o -MF core/CompuCell3D/plugins/BoundaryPixelTracker/CMakeFiles/BoundaryPixelTrackerShared.dir/BoundaryPixelTrackerPlugin.cpp.o.d -o core/CompuCell3D/plugins/BoundaryPixelTracker/CMakeFiles/BoundaryPixelTrackerShared.dir/BoundaryPixelTrackerPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTrackerPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTrackerPlugin.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTrackerPlugin.cpp:1:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTrackerPlugin.cpp:8:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTrackerPlugin.h: In constructor ‘CompuCell3D::BoundaryPixelTrackerPlugin::BoundaryPixelTrackerPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTrackerPlugin.h:37:25: warning: ‘CompuCell3D::BoundaryPixelTrackerPlugin::xmlData’ will be initialized after [-Wreorder]
   37 |         CC3DXMLElement *xmlData;
      |                         ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTrackerPlugin.h:34:22: warning:   ‘unsigned int CompuCell3D::BoundaryPixelTrackerPlugin::maxNeighborIndex’ [-Wreorder]
   34 |         unsigned int maxNeighborIndex;
      |                      ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTrackerPlugin.cpp:11:1: warning:   when initialized here [-Wreorder]
   11 | BoundaryPixelTrackerPlugin::BoundaryPixelTrackerPlugin() :
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTrackerPlugin.cpp: In member function ‘virtual void CompuCell3D::BoundaryPixelTrackerPlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTrackerPlugin.cpp:114:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  114 |         for (int i = 0; i < extraBoundariesVec.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTrackerPlugin.cpp: In member function ‘void CompuCell3D::BoundaryPixelTrackerPlugin::updateBoundaryPixels(const CompuCell3D::Point3D&, CompuCell3D::CellG*, CompuCell3D::CellG*, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTrackerPlugin.cpp:179:42: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  179 |         for (unsigned int nIdx = 0; nIdx <= maxNI; ++nIdx) {
      |                                     ~~~~~^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTrackerPlugin.cpp:202:48: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  202 |             for (unsigned int nnIdx = 0; nnIdx <= maxNI; ++nnIdx) {
      |                                          ~~~~~~^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTrackerPlugin.cpp:261:42: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  261 |         for (unsigned int nIdx = 0; nIdx <= maxNI; ++nIdx) {
      |                                     ~~~~~^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTrackerPlugin.cpp: In member function ‘std::set<CompuCell3D::BoundaryPixelTrackerData>* CompuCell3D::BoundaryPixelTrackerPlugin::getPixelSetForNeighborOrderPtr(CompuCell3D::CellG*, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTrackerPlugin.cpp:305:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  305 |     if (_neighborOrder == this->neighborOrder) {
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
[107/395] /usr/bin/g++ -DFMT_SHARED -DFieldExtractor_EXPORTS -DSCN_DISABLE_FAST_FLOAT=0 -DSCN_DISABLE_REGEX=0 -DSCN_REGEX_BACKEND=0 -DVTK9 -Dkiss_fft_scalar=double -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -isystem /usr/include/vtk -isystem /usr/include/vtk/vtkscn/include -isystem /usr/include/vtk/vtkscn -isystem /usr/include/vtk/token -isystem /usr/include/vtk/vtkkissfft -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldExtractorBase.cpp.o -MF core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldExtractorBase.cpp.o.d -o core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldExtractorBase.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorBase.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/NumericalUtils.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorBase.cpp:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorBase.cpp: In member function ‘std::vector<int, std::allocator<int> > CompuCell3D::FieldExtractorBase::pointOrder(std::string)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorBase.cpp:51:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   51 |     for (int i = 0; i < _plane.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorBase.cpp: In member function ‘std::vector<int, std::allocator<int> > CompuCell3D::FieldExtractorBase::dimOrder(std::string)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorBase.cpp:81:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   81 |     for (int i = 0; i < _plane.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorBase.cpp: In member function ‘std::vector<int, std::allocator<int> > CompuCell3D::FieldExtractorBase::permuted_order_to_xyz(std::string)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorBase.cpp:110:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string<char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  110 |     for (int i = 0; i < _plane.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~
[108/395] /usr/bin/g++ -DFMT_SHARED -DFieldExtractor_EXPORTS -DSCN_DISABLE_FAST_FLOAT=0 -DSCN_DISABLE_REGEX=0 -DSCN_REGEX_BACKEND=0 -DVTK9 -Dkiss_fft_scalar=double -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -isystem /usr/include/vtk -isystem /usr/include/vtk/vtkscn/include -isystem /usr/include/vtk/vtkscn -isystem /usr/include/vtk/token -isystem /usr/include/vtk/vtkkissfft -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldStorage.cpp.o -MF core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldStorage.cpp.o.d -o core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldStorage.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldStorage.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldStorage.h:10,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldStorage.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
[109/395] /usr/bin/g++ -DFMT_SHARED -DFieldExtractor_EXPORTS -DSCN_DISABLE_FAST_FLOAT=0 -DSCN_DISABLE_REGEX=0 -DSCN_REGEX_BACKEND=0 -DVTK9 -Dkiss_fft_scalar=double -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -isystem /usr/include/vtk -isystem /usr/include/vtk/vtkscn/include -isystem /usr/include/vtk/vtkscn -isystem /usr/include/vtk/token -isystem /usr/include/vtk/vtkkissfft -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldWriterCML.cpp.o -MF core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldWriterCML.cpp.o.d -o core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldWriterCML.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriterCML.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldStorage.h:10,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriterCML.h:13,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriterCML.cpp:9:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriterCML.cpp:12:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldStorage.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:12,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h:8,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventory.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriterCML.cpp:15:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h: In constructor ‘CompuCell3D::FocalPointPlasticityTrackerData::FocalPointPlasticityTrackerData(CompuCell3D::CellG*, float, float, float, int, float, int, bool, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:81:13: warning: ‘CompuCell3D::FocalPointPlasticityTrackerData::anchorId’ will be initialized after [-Wreorder]
   81 |         int anchorId;
      |             ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:78:14: warning:   ‘bool CompuCell3D::FocalPointPlasticityTrackerData::isInitiator’ [-Wreorder]
   78 |         bool isInitiator;
      |              ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:23:9: warning:   when initialized here [-Wreorder]
   23 |         FocalPointPlasticityTrackerData(CellG *_neighborAddress = 0, float _lambdaDistance = 0.0,
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h: In constructor ‘CompuCell3D::FocalPointPlasticityLinkTrackerData::FocalPointPlasticityLinkTrackerData(float, float, float, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:158:13: warning: ‘CompuCell3D::FocalPointPlasticityLinkTrackerData::anchorId’ will be initialized after [-Wreorder]
  158 |         int anchorId;
      |             ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:156:13: warning:   ‘int CompuCell3D::FocalPointPlasticityLinkTrackerData::initMCS’ [-Wreorder]
  156 |         int initMCS;
      |             ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:115:9: warning:   when initialized here [-Wreorder]
  115 |         FocalPointPlasticityLinkTrackerData(float _lambdaDistance = 0.0, float _targetDistance = 0.0,
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h: In constructor ‘CompuCell3D::FocalPointPlasticityLinkBase::FocalPointPlasticityLinkBase()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:50:16: warning: ‘CompuCell3D::FocalPointPlasticityLinkBase::initiated’ will be initialized after [-Wreorder]
   50 |         CellG *initiated;
      |                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:47:18: warning:   ‘CompuCell3D::Potts3D* CompuCell3D::FocalPointPlasticityLinkBase::potts’ [-Wreorder]
   47 |         Potts3D *potts;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:61:9: warning:   when initialized here [-Wreorder]
   61 |         FocalPointPlasticityLinkBase() :
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriterCML.cpp: In member function ‘bool CompuCell3D::FieldWriterCML::addCellFieldForOutput()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriterCML.cpp:177:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::FocalPointPlasticityLink*, std::allocator<CompuCell3D::FocalPointPlasticityLink*> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  177 |         for(int i = 0; i < listLinks.size(); i++) {
      |                        ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriterCML.cpp:193:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::FocalPointPlasticityInternalLink*, std::allocator<CompuCell3D::FocalPointPlasticityInternalLink*> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  193 |         for(int i = 0; i < listLinksInternal.size(); i++) {
      |                        ~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriterCML.cpp:209:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::FocalPointPlasticityAnchor*, std::allocator<CompuCell3D::FocalPointPlasticityAnchor*> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  209 |         for(int i = 0; i < listAnchors.size(); i++) {
      |                        ~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriterCML.cpp: In member function ‘bool CompuCell3D::FieldWriterCML::addConFieldForOutput(const std::string&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriterCML.cpp:230:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
  230 |     if(mitr == fieldMap.end())
      |     ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriterCML.cpp:232:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
  232 |         auto conFieldPtr = mitr->second;
      |         ^~~~
[110/395] /usr/bin/g++ -DFMT_SHARED -DFieldExtractor_EXPORTS -DSCN_DISABLE_FAST_FLOAT=0 -DSCN_DISABLE_REGEX=0 -DSCN_REGEX_BACKEND=0 -DVTK9 -Dkiss_fft_scalar=double -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -isystem /usr/include/vtk -isystem /usr/include/vtk/vtkscn/include -isystem /usr/include/vtk/vtkscn -isystem /usr/include/vtk/token -isystem /usr/include/vtk/vtkkissfft -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldWriter.cpp.o -MF core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldWriter.cpp.o.d -o core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldWriter.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriter.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldStorage.h:10,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriter.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriter.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriter.cpp:5:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriter.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriter.h: In constructor ‘CompuCell3D::FieldWriter::FieldWriter()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriter.h:62:32: warning: ‘CompuCell3D::FieldWriter::fsPtr’ will be initialized after [-Wreorder]
   62 |                 FieldStorage * fsPtr;
      |                                ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriter.h:38:27: warning:   ‘CompuCell3D::Potts3D* CompuCell3D::FieldWriter::potts’ [-Wreorder]
   38 |                 Potts3D * potts;
      |                           ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriter.cpp:32:1: warning:   when initialized here [-Wreorder]
   32 | FieldWriter::FieldWriter() : fsPtr(0), potts(0), sim(0), latticeData(0) {
      | ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriter.cpp: In member function ‘void CompuCell3D::FieldWriter::clear()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriter.cpp:167:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  167 |         for (int i =0 ; i < arrayNameVec.size() ;++i){
      |                         ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriter.cpp: In member function ‘void CompuCell3D::FieldWriter::addCellFieldForOutput()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriter.cpp:307:17: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  307 |                 for(pt.y =0 ; pt.y<fieldDim.y ; ++pt.y)
      |                 ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriter.cpp:321:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  321 |                         latticeData->GetPointData()->AddArray(typeArray);
      |                         ^~~~~~~~~~~
[111/395] /usr/bin/g++ -DFMT_SHARED -DFieldExtractor_EXPORTS -DSCN_DISABLE_FAST_FLOAT=0 -DSCN_DISABLE_REGEX=0 -DSCN_REGEX_BACKEND=0 -DVTK9 -Dkiss_fft_scalar=double -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -isystem /usr/include/vtk -isystem /usr/include/vtk/vtkscn/include -isystem /usr/include/vtk/vtkscn -isystem /usr/include/vtk/token -isystem /usr/include/vtk/vtkkissfft -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldExtractorCML.cpp.o -MF core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldExtractorCML.cpp.o.d -o core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldExtractorCML.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldStorage.h:10,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriterCML.h:13,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:32:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:31:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.h: In constructor ‘CompuCell3D::FieldExtractorCML::FieldExtractorCML()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.h:260:30: warning: ‘CompuCell3D::FieldExtractorCML::lds’ will be initialized after [-Wreorder]
  260 |         vtkStructuredPoints *lds;
      |                              ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.h:259:13: warning:   ‘int CompuCell3D::FieldExtractorCML::zDimFactor’ [-Wreorder]
  259 |         int zDimFactor, yDimFactor;
      |             ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:35:1: warning:   when initialized here [-Wreorder]
   35 | FieldExtractorCML::FieldExtractorCML() : lds(0), zDimFactor(0), yDimFactor(0) {
      | ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp: In member function ‘virtual void CompuCell3D::FieldExtractorCML::fillCellFieldData2D(vtk_obj_addr_int_t, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:106:9: warning: unused variable ‘type’ [-Wunused-variable]
  106 |     int type;
      |         ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp: In member function ‘virtual void CompuCell3D::FieldExtractorCML::fillCellFieldData2DCartesian(vtk_obj_addr_int_t, vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:197:23: warning: unused variable ‘cellId’ [-Wunused-variable]
  197 |             vtkIdType cellId = _cellsArray->InsertNextCell(4);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:154:9: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=]
  154 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp: In member function ‘virtual void CompuCell3D::FieldExtractorCML::fillCellFieldData2DHex(vtk_obj_addr_int_t, vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:268:23: warning: unused variable ‘cellId’ [-Wunused-variable]
  268 |             vtkIdType cellId = _hexCellsArray->InsertNextCell(6);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:233:9: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=]
  233 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp: In member function ‘virtual void CompuCell3D::FieldExtractorCML::fillBorder2D(const char*, vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:311:9: warning: unused variable ‘k’ [-Wunused-variable]
  311 |     int k = 0;
      |         ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp: In member function ‘virtual void CompuCell3D::FieldExtractorCML::fillBorder2DHex(const char*, vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:434:9: warning: unused variable ‘k’ [-Wunused-variable]
  434 |     int k = 0;
      |         ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp: In member function ‘virtual bool CompuCell3D::FieldExtractorCML::fillConFieldData2DHex(vtk_obj_addr_int_t, vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:923:23: warning: unused variable ‘cellId’ [-Wunused-variable]
  923 |             vtkIdType cellId = _hexCellsArray->InsertNextCell(6);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:892:9: warning: unused variable ‘offset’ [-Wunused-variable]
  892 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp: In member function ‘virtual bool CompuCell3D::FieldExtractorCML::fillConFieldData2DCartesian(vtk_obj_addr_int_t, vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:1088:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 1088 |             vtkIdType cellId = _cartesianCellsArray->InsertNextCell(4);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:1053:9: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=]
 1053 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp: In member function ‘virtual bool CompuCell3D::FieldExtractorCML::fillVectorFieldData2D(vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:1146:11: warning: unused variable ‘vecTmp’ [-Wunused-variable]
 1146 |     float vecTmp[3];
      |           ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp: In member function ‘virtual bool CompuCell3D::FieldExtractorCML::fillVectorFieldData2DHex(vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:1200:11: warning: unused variable ‘vecTmp’ [-Wunused-variable]
 1200 |     float vecTmp[3];
      |           ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp: In member function ‘virtual void CompuCell3D::FieldExtractorCML::fillCellFieldGlyphs2D(vtk_obj_addr_int_t, vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:1718:9: warning: unused variable ‘offset’ [-Wunused-variable]
 1718 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:1724:10: warning: unused variable ‘pc’ [-Wunused-variable]
 1724 |     long pc = 0;
      |          ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp: In member function ‘virtual void CompuCell3D::FieldExtractorCML::fillConFieldGlyphs2D(std::string, vtk_obj_addr_int_t, vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:1859:13: warning: unused variable ‘cell_type’ [-Wunused-variable]
 1859 |         int cell_type = cell_id_type_pair.second;
      |             ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:1816:9: warning: unused variable ‘offset’ [-Wunused-variable]
 1816 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:1820:10: warning: unused variable ‘pc’ [-Wunused-variable]
 1820 |     long pc = 0;
      |          ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp: In member function ‘virtual std::vector<int, std::allocator<int> > CompuCell3D::FieldExtractorCML::fillCellFieldGlyphs3D(vtk_obj_addr_int_t, vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::vector<int, std::allocator<int> >*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:1946:9: warning: unused variable ‘offset’ [-Wunused-variable]
 1946 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:1952:10: warning: unused variable ‘pc’ [-Wunused-variable]
 1952 |     long pc = 0;
      |          ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp: In member function ‘virtual std::vector<int, std::allocator<int> > CompuCell3D::FieldExtractorCML::fillConFieldGlyphs3D(std::string, vtk_obj_addr_int_t, vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::vector<int, std::allocator<int> >*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:2110:13: warning: unused variable ‘cell_type’ [-Wunused-variable]
 2110 |         int cell_type = cell_id_type_pair.second;
      |             ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:2056:9: warning: unused variable ‘offset’ [-Wunused-variable]
 2056 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractorCML.cpp:2062:10: warning: unused variable ‘pc’ [-Wunused-variable]
 2062 |     long pc = 0;
      |          ^~
[112/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/ClusterSurfaceTracker/CMakeFiles/ClusterSurfaceTrackerShared.dir/link.d -Wl,-soname,libCC3DClusterSurfaceTracker.so.4.9 -o core/CompuCell3D/plugins/ClusterSurfaceTracker/libCC3DClusterSurfaceTracker.so.4.9.0 core/CompuCell3D/plugins/ClusterSurfaceTracker/CMakeFiles/ClusterSurfaceTrackerShared.dir/ClusterSurfaceTrackerPlugin.cpp.o core/CompuCell3D/plugins/ClusterSurfaceTracker/CMakeFiles/ClusterSurfaceTrackerShared.dir/ClusterSurfaceTrackerPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../PixelTracker:\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/plugins/PixelTracker/libCC3DPixelTracker.so.4.9.0  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  -ldl  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[113/395] /usr/bin/g++ -DFMT_SHARED -DFieldExtractor_EXPORTS -DSCN_DISABLE_FAST_FLOAT=0 -DSCN_DISABLE_REGEX=0 -DSCN_REGEX_BACKEND=0 -DVTK9 -Dkiss_fft_scalar=double -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -isystem /usr/include/vtk -isystem /usr/include/vtk/vtkscn/include -isystem /usr/include/vtk/vtkscn -isystem /usr/include/vtk/token -isystem /usr/include/vtk/vtkkissfft -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldStreamer.cpp.o -MF core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldStreamer.cpp.o.d -o core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldStreamer.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldStreamer.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldStorage.h:10,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldWriterCML.h:13,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldStreamer.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldStreamer.cpp:9:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
[114/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/ElasticityTracker/CMakeFiles/ElasticityTrackerShared.dir/link.d -Wl,-soname,libCC3DElasticityTracker.so.4.9 -o core/CompuCell3D/plugins/ElasticityTracker/libCC3DElasticityTracker.so.4.9.0 core/CompuCell3D/plugins/ElasticityTracker/CMakeFiles/ElasticityTrackerShared.dir/ElasticityTrackerPlugin.cpp.o core/CompuCell3D/plugins/ElasticityTracker/CMakeFiles/ElasticityTrackerShared.dir/ElasticityTrackerPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[115/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/CellType/CMakeFiles/CellTypeShared.dir/link.d -Wl,-soname,libCC3DCellType.so.4.9 -o core/CompuCell3D/plugins/CellType/libCC3DCellType.so.4.9.0 core/CompuCell3D/plugins/CellType/CMakeFiles/CellTypeShared.dir/CellTypePlugin.cpp.o core/CompuCell3D/plugins/CellType/CMakeFiles/CellTypeShared.dir/CellTypePluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[116/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/PolarizationVector/CMakeFiles/PolarizationVectorShared.dir/link.d -Wl,-soname,libCC3DPolarizationVector.so.4.9 -o core/CompuCell3D/plugins/PolarizationVector/libCC3DPolarizationVector.so.4.9.0 core/CompuCell3D/plugins/PolarizationVector/CMakeFiles/PolarizationVectorShared.dir/PolarizationVectorPlugin.cpp.o core/CompuCell3D/plugins/PolarizationVector/CMakeFiles/PolarizationVectorShared.dir/PolarizationVectorPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[117/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/PlasticityTracker/CMakeFiles/PlasticityTrackerShared.dir/link.d -Wl,-soname,libCC3DPlasticityTracker.so.4.9 -o core/CompuCell3D/plugins/PlasticityTracker/libCC3DPlasticityTracker.so.4.9.0 core/CompuCell3D/plugins/PlasticityTracker/CMakeFiles/PlasticityTrackerShared.dir/PlasticityTrackerPlugin.cpp.o core/CompuCell3D/plugins/PlasticityTracker/CMakeFiles/PlasticityTrackerShared.dir/PlasticityTrackerPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../NeighborTracker:\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/plugins/NeighborTracker/libCC3DNeighborTracker.so.4.9.0  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  -ldl  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[118/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/steppables/BoxWatcher/CMakeFiles/BoxWatcherShared.dir/link.d -Wl,-soname,libCC3DBoxWatcher.so.4.9 -o core/CompuCell3D/steppables/BoxWatcher/libCC3DBoxWatcher.so.4.9.0 core/CompuCell3D/steppables/BoxWatcher/CMakeFiles/BoxWatcherShared.dir/BoxWatcher.cpp.o core/CompuCell3D/steppables/BoxWatcher/CMakeFiles/BoxWatcherShared.dir/BoxWatcherProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../Automaton:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[119/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/BoundaryPixelTracker/CMakeFiles/BoundaryPixelTrackerShared.dir/link.d -Wl,-soname,libCC3DBoundaryPixelTracker.so.4.9 -o core/CompuCell3D/plugins/BoundaryPixelTracker/libCC3DBoundaryPixelTracker.so.4.9.0 core/CompuCell3D/plugins/BoundaryPixelTracker/CMakeFiles/BoundaryPixelTrackerShared.dir/BoundaryPixelTrackerPlugin.cpp.o core/CompuCell3D/plugins/BoundaryPixelTracker/CMakeFiles/BoundaryPixelTrackerShared.dir/BoundaryPixelTrackerPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[120/395] /usr/bin/g++ -DVectorFieldPolarizationShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/VectorFieldPolarization/CMakeFiles/VectorFieldPolarizationShared.dir/VectorFieldPolarizationPluginProxy.cpp.o -MF core/CompuCell3D/plugins/VectorFieldPolarization/CMakeFiles/VectorFieldPolarizationShared.dir/VectorFieldPolarizationPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/VectorFieldPolarization/CMakeFiles/VectorFieldPolarizationShared.dir/VectorFieldPolarizationPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VectorFieldPolarization/VectorFieldPolarizationPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VectorFieldPolarization/VectorFieldPolarizationPlugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VectorFieldPolarization/VectorFieldPolarizationPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[121/395] /usr/bin/g++ -DVectorFieldPolarizationShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/VectorFieldPolarization/CMakeFiles/VectorFieldPolarizationShared.dir/VectorFieldPolarizationPlugin.cpp.o -MF core/CompuCell3D/plugins/VectorFieldPolarization/CMakeFiles/VectorFieldPolarizationShared.dir/VectorFieldPolarizationPlugin.cpp.o.d -o core/CompuCell3D/plugins/VectorFieldPolarization/CMakeFiles/VectorFieldPolarizationShared.dir/VectorFieldPolarizationPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VectorFieldPolarization/VectorFieldPolarizationPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VectorFieldPolarization/VectorFieldPolarizationPlugin.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VectorFieldPolarization/VectorFieldPolarizationPlugin.cpp:8:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VectorFieldPolarization/VectorFieldPolarizationPlugin.h: In constructor ‘CompuCell3D::VectorFieldPolarizationPlugin::VectorFieldPolarizationPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VectorFieldPolarization/VectorFieldPolarizationPlugin.h:34:44: warning: ‘CompuCell3D::VectorFieldPolarizationPlugin::lockPtr’ will be initialized after [-Wreorder]
   34 |         ParallelUtilsOpenMP::OpenMPLock_t *lockPtr;
      |                                            ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VectorFieldPolarization/VectorFieldPolarizationPlugin.h:30:25: warning:   ‘CC3DXMLElement* CompuCell3D::VectorFieldPolarizationPlugin::xmlData’ [-Wreorder]
   30 |         CC3DXMLElement *xmlData;
      |                         ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VectorFieldPolarization/VectorFieldPolarizationPlugin.cpp:10:1: warning:   when initialized here [-Wreorder]
   10 | VectorFieldPolarizationPlugin::VectorFieldPolarizationPlugin():
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VectorFieldPolarization/VectorFieldPolarizationPlugin.h:37:36: warning: ‘CompuCell3D::VectorFieldPolarizationPlugin::cellFieldG’ will be initialized after [-Wreorder]
   37 |         WatchableField3D<CellG *> *cellFieldG;
      |                                    ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VectorFieldPolarization/VectorFieldPolarizationPlugin.h:36:27: warning:   ‘CompuCell3D::BoundaryStrategy* CompuCell3D::VectorFieldPolarizationPlugin::boundaryStrategy’ [-Wreorder]
   36 |         BoundaryStrategy *boundaryStrategy;
      |                           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VectorFieldPolarization/VectorFieldPolarizationPlugin.cpp:10:1: warning:   when initialized here [-Wreorder]
   10 | VectorFieldPolarizationPlugin::VectorFieldPolarizationPlugin():
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VectorFieldPolarization/VectorFieldPolarizationPlugin.h:42:47: warning: ‘CompuCell3D::VectorFieldPolarizationPlugin::vectorFieldPtr’ will be initialized after [-Wreorder]
   42 |         Simulator::vectorField3DNumpyImpl_t * vectorFieldPtr;
      |                                               ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VectorFieldPolarization/VectorFieldPolarizationPlugin.h:39:23: warning:   ‘CompuCell3D::Field3D<int>* CompuCell3D::VectorFieldPolarizationPlugin::intNpyField’ [-Wreorder]
   39 |         Field3D<int> *intNpyField;
      |                       ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VectorFieldPolarization/VectorFieldPolarizationPlugin.cpp:10:1: warning:   when initialized here [-Wreorder]
   10 | VectorFieldPolarizationPlugin::VectorFieldPolarizationPlugin():
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = int; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:194:21:   required from ‘void CompuCell3D::Simulator::createGenericScalarField(const std::string&, CompuCell3D::array_size_t) [with T = int; std::string = std::__cxx11::basic_string<char>; CompuCell3D::array_size_t = long unsigned int]’
  194 |                     new NumpyArrayWrapper3DImpl<T>(
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  195 |                             std::vector<array_size_t>{
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~
  196 |                                     static_cast<array_size_t>(dim.x),
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  197 |                                     static_cast<array_size_t>(dim.y),
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  198 |                                     static_cast<array_size_t>(dim.z)
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  199 |                             },
      |                             ~~
  200 |                             padding
      |                             ~~~~~~~
  201 |                     )
      |                     ~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VectorFieldPolarization/VectorFieldPolarizationPlugin.cpp:51:39:   required from here
   51 |     sim->createGenericScalarField<int>(intFieldName);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<int>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<int>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:150:22:   required from here
  150 |         virtual bool isValid(const Point3D &pt) const {
      |                      ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
[122/395] /usr/bin/g++ -DImplicitMotilityShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/ImplicitMotility/CMakeFiles/ImplicitMotilityShared.dir/ImplicitMotilityPlugin.cpp.o -MF core/CompuCell3D/plugins/ImplicitMotility/CMakeFiles/ImplicitMotilityShared.dir/ImplicitMotilityPlugin.cpp.o.d -o core/CompuCell3D/plugins/ImplicitMotility/CMakeFiles/ImplicitMotilityShared.dir/ImplicitMotilityPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ImplicitMotility/ImplicitMotilityPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ImplicitMotility/ImplicitMotilityPlugin.cpp:5:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ImplicitMotility/ImplicitMotilityPlugin.cpp:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ImplicitMotility/ImplicitMotilityPlugin.h: In constructor ‘CompuCell3D::ImplicitMotilityPlugin::ImplicitMotilityPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ImplicitMotility/ImplicitMotilityPlugin.h:70:44: warning: ‘CompuCell3D::ImplicitMotilityPlugin::lockPtr’ will be initialized after [-Wreorder]
   70 |         ParallelUtilsOpenMP::OpenMPLock_t *lockPtr;
      |                                            ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ImplicitMotility/ImplicitMotilityPlugin.h:55:25: warning:   ‘CC3DXMLElement* CompuCell3D::ImplicitMotilityPlugin::xmlData’ [-Wreorder]
   55 |         CC3DXMLElement *xmlData;
      |                         ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ImplicitMotility/ImplicitMotilityPlugin.cpp:16:1: warning:   when initialized here [-Wreorder]
   16 | ImplicitMotilityPlugin::ImplicitMotilityPlugin() :
      | ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ImplicitMotility/ImplicitMotilityPlugin.h:78:36: warning: ‘CompuCell3D::ImplicitMotilityPlugin::cellFieldG’ will be initialized after [-Wreorder]
   78 |         WatchableField3D<CellG *> *cellFieldG;
      |                                    ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ImplicitMotility/ImplicitMotilityPlugin.h:76:27: warning:   ‘CompuCell3D::BoundaryStrategy* CompuCell3D::ImplicitMotilityPlugin::boundaryStrategy’ [-Wreorder]
   76 |         BoundaryStrategy *boundaryStrategy;
      |                           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ImplicitMotility/ImplicitMotilityPlugin.cpp:16:1: warning:   when initialized here [-Wreorder]
   16 | ImplicitMotilityPlugin::ImplicitMotilityPlugin() :
      | ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ImplicitMotility/ImplicitMotilityPlugin.cpp: In member function ‘virtual void CompuCell3D::ImplicitMotilityPlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ImplicitMotility/ImplicitMotilityPlugin.cpp:307:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  307 |             for (int i = 0; i < energyVec.size(); ++i) {
      |                             ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ImplicitMotility/ImplicitMotilityPlugin.cpp:325:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ImplicitMotilityParam>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  325 |             for (int i = 0; i < motilityParamVectorTmp.size(); i++) {
      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ImplicitMotility/ImplicitMotilityPlugin.cpp:320:17: warning: variable ‘maxTypeId’ set but not used [-Wunused-but-set-variable=]
  320 |             int maxTypeId = 0;
      |                 ^~~~~~~~~
[123/395] /usr/bin/g++ -DImplicitMotilityShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/ImplicitMotility/CMakeFiles/ImplicitMotilityShared.dir/ImplicitMotilityPluginProxy.cpp.o -MF core/CompuCell3D/plugins/ImplicitMotility/CMakeFiles/ImplicitMotilityShared.dir/ImplicitMotilityPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/ImplicitMotility/CMakeFiles/ImplicitMotilityShared.dir/ImplicitMotilityPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ImplicitMotility/ImplicitMotilityPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ImplicitMotility/ImplicitMotilityPlugin.h:8,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ImplicitMotility/ImplicitMotilityPluginProxy.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[124/395] /usr/bin/g++ -DCurvatureCalculatorShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/CurvatureCalculator/CMakeFiles/CurvatureCalculatorShared.dir/CurvatureCalculatorPlugin.cpp.o -MF core/CompuCell3D/plugins/CurvatureCalculator/CMakeFiles/CurvatureCalculatorShared.dir/CurvatureCalculatorPlugin.cpp.o.d -o core/CompuCell3D/plugins/CurvatureCalculator/CMakeFiles/CurvatureCalculatorShared.dir/CurvatureCalculatorPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.cpp:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.h: In constructor ‘CompuCell3D::CurvatureCalculatorPlugin::CurvatureCalculatorPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.h:45:44: warning: ‘CompuCell3D::CurvatureCalculatorPlugin::lockPtr’ will be initialized after [-Wreorder]
   45 |         ParallelUtilsOpenMP::OpenMPLock_t *lockPtr;
      |                                            ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.h:37:25: warning:   ‘CC3DXMLElement* CompuCell3D::CurvatureCalculatorPlugin::xmlData’ [-Wreorder]
   37 |         CC3DXMLElement *xmlData;
      |                         ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.cpp:13:1: warning:   when initialized here [-Wreorder]
   13 | CurvatureCalculatorPlugin::CurvatureCalculatorPlugin() :
      | ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.h:51:36: warning: ‘CompuCell3D::CurvatureCalculatorPlugin::cellFieldG’ will be initialized after [-Wreorder]
   51 |         WatchableField3D<CellG *> *cellFieldG;
      |                                    ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.h:49:27: warning:   ‘CompuCell3D::BoundaryStrategy* CompuCell3D::CurvatureCalculatorPlugin::boundaryStrategy’ [-Wreorder]
   49 |         BoundaryStrategy *boundaryStrategy;
      |                           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.cpp:13:1: warning:   when initialized here [-Wreorder]
   13 | CurvatureCalculatorPlugin::CurvatureCalculatorPlugin() :
      | ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.h:57:13: warning: ‘CompuCell3D::CurvatureCalculatorPlugin::maxNeighborIndex’ will be initialized after [-Wreorder]
   57 |         int maxNeighborIndex;
      |             ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.h:53:54: warning:   ‘CompuCell3D::ExtraMembersGroupAccessor<CompuCell3D::NeighborTracker>* CompuCell3D::CurvatureCalculatorPlugin::neighborTrackerAccessorPtr’ [-Wreorder]
   53 |         ExtraMembersGroupAccessor <NeighborTracker> *neighborTrackerAccessorPtr;
      |                                                      ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.cpp:13:1: warning:   when initialized here [-Wreorder]
   13 | CurvatureCalculatorPlugin::CurvatureCalculatorPlugin() :
      | ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.cpp: In member function ‘std::map<long int, float> CompuCell3D::CurvatureCalculatorPlugin::getProbabilityByNeighbor(CompuCell3D::CellG*, float, float)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.cpp:130:42: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  130 |         for (unsigned int nIdx = 0; nIdx <= maxNeighborIndex; ++nIdx) {
      |                                     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.cpp: In member function ‘float CompuCell3D::CurvatureCalculatorPlugin::getGrowthProbability(const CompuCell3D::Point3D&, CompuCell3D::CellG*, CompuCell3D::CellG*, float, float)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.cpp:162:38: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  162 |     for (unsigned int nIdx = 0; nIdx <= maxNeighborIndexProbCalc; ++nIdx) {
      |                                 ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.cpp: In member function ‘virtual void CompuCell3D::CurvatureCalculatorPlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.cpp:200:21: warning: unused variable ‘jXMLElem’ [-Wunused-variable]
  200 |     CC3DXMLElement *jXMLElem = _xmlData->getFirstElement("J");
      |                     ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.cpp:202:21: warning: unused variable ‘tXMLElem’ [-Wunused-variable]
  202 |     CC3DXMLElement *tXMLElem = _xmlData->getFirstElement("T");
      |                     ^~~~~~~~
[125/395] /usr/bin/g++ -DCurvatureCalculatorShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/CurvatureCalculator/CMakeFiles/CurvatureCalculatorShared.dir/CurvatureCalculatorPluginProxy.cpp.o -MF core/CompuCell3D/plugins/CurvatureCalculator/CMakeFiles/CurvatureCalculatorShared.dir/CurvatureCalculatorPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/CurvatureCalculator/CMakeFiles/CurvatureCalculatorShared.dir/CurvatureCalculatorPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPluginProxy.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[126/395] /usr/bin/g++ -DFMT_SHARED -DFieldExtractor_EXPORTS -DSCN_DISABLE_FAST_FLOAT=0 -DSCN_DISABLE_REGEX=0 -DSCN_REGEX_BACKEND=0 -DVTK9 -Dkiss_fft_scalar=double -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -isystem /usr/include/vtk -isystem /usr/include/vtk/vtkscn/include -isystem /usr/include/vtk/vtkscn -isystem /usr/include/vtk/token -isystem /usr/include/vtk/vtkkissfft -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldCopier.cpp.o -MF core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldCopier.cpp.o.d -o core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldCopier.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldCopier.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldCopier.cpp:6:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldCopier.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldCopier.cpp:5:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:33:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[127/395] /usr/bin/g++ -DOrientedGrowthShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/OrientedGrowth/CMakeFiles/OrientedGrowthShared.dir/OrientedGrowthPluginProxy.cpp.o -MF core/CompuCell3D/plugins/OrientedGrowth/CMakeFiles/OrientedGrowthShared.dir/OrientedGrowthPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/OrientedGrowth/CMakeFiles/OrientedGrowthShared.dir/OrientedGrowthPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth/OrientedGrowthPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth/OrientedGrowthPlugin.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth/OrientedGrowthPluginProxy.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[128/395] /usr/bin/g++ -DOrientedGrowthShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/OrientedGrowth/CMakeFiles/OrientedGrowthShared.dir/OrientedGrowthPlugin.cpp.o -MF core/CompuCell3D/plugins/OrientedGrowth/CMakeFiles/OrientedGrowthShared.dir/OrientedGrowthPlugin.cpp.o.d -o core/CompuCell3D/plugins/OrientedGrowth/CMakeFiles/OrientedGrowthShared.dir/OrientedGrowthPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth/OrientedGrowthPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth/OrientedGrowthPlugin.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth/OrientedGrowthPlugin.cpp:6:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth/OrientedGrowthPlugin.h: In constructor ‘CompuCell3D::OrientedGrowthPlugin::OrientedGrowthPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth/OrientedGrowthPlugin.h:42:44: warning: ‘CompuCell3D::OrientedGrowthPlugin::lockPtr’ will be initialized after [-Wreorder]
   42 |         ParallelUtilsOpenMP::OpenMPLock_t *lockPtr;
      |                                            ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth/OrientedGrowthPlugin.h:34:25: warning:   ‘CC3DXMLElement* CompuCell3D::OrientedGrowthPlugin::xmlData’ [-Wreorder]
   34 |         CC3DXMLElement *xmlData;
      |                         ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth/OrientedGrowthPlugin.cpp:9:1: warning:   when initialized here [-Wreorder]
    9 | OrientedGrowthPlugin::OrientedGrowthPlugin() :
      | ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth/OrientedGrowthPlugin.h:47:36: warning: ‘CompuCell3D::OrientedGrowthPlugin::cellFieldG’ will be initialized after [-Wreorder]
   47 |         WatchableField3D<CellG *> *cellFieldG;
      |                                    ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth/OrientedGrowthPlugin.h:46:27: warning:   ‘CompuCell3D::BoundaryStrategy* CompuCell3D::OrientedGrowthPlugin::boundaryStrategy’ [-Wreorder]
   46 |         BoundaryStrategy *boundaryStrategy;
      |                           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth/OrientedGrowthPlugin.cpp:9:1: warning:   when initialized here [-Wreorder]
    9 | OrientedGrowthPlugin::OrientedGrowthPlugin() :
      | ^~~~~~~~~~~~~~~~~~~~
[129/395] /usr/bin/g++ -DOrientedGrowth2Shared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/OrientedGrowth2/CMakeFiles/OrientedGrowth2Shared.dir/OrientedGrowth2Plugin.cpp.o -MF core/CompuCell3D/plugins/OrientedGrowth2/CMakeFiles/OrientedGrowth2Shared.dir/OrientedGrowth2Plugin.cpp.o.d -o core/CompuCell3D/plugins/OrientedGrowth2/CMakeFiles/OrientedGrowth2Shared.dir/OrientedGrowth2Plugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2Plugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2Plugin.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2Plugin.cpp:5:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2Plugin.h: In constructor ‘CompuCell3D::OrientedGrowth2Plugin::OrientedGrowth2Plugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2Plugin.h:36:44: warning: ‘CompuCell3D::OrientedGrowth2Plugin::lockPtr’ will be initialized after [-Wreorder]
   36 |         ParallelUtilsOpenMP::OpenMPLock_t *lockPtr;
      |                                            ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2Plugin.h:28:25: warning:   ‘CC3DXMLElement* CompuCell3D::OrientedGrowth2Plugin::xmlData’ [-Wreorder]
   28 |         CC3DXMLElement *xmlData;
      |                         ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2Plugin.cpp:8:1: warning:   when initialized here [-Wreorder]
    8 | OrientedGrowth2Plugin::OrientedGrowth2Plugin():
      | ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2Plugin.h:41:36: warning: ‘CompuCell3D::OrientedGrowth2Plugin::cellFieldG’ will be initialized after [-Wreorder]
   41 |         WatchableField3D<CellG *> *cellFieldG;
      |                                    ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2Plugin.h:40:27: warning:   ‘CompuCell3D::BoundaryStrategy* CompuCell3D::OrientedGrowth2Plugin::boundaryStrategy’ [-Wreorder]
   40 |         BoundaryStrategy *boundaryStrategy;
      |                           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2Plugin.cpp:8:1: warning:   when initialized here [-Wreorder]
    8 | OrientedGrowth2Plugin::OrientedGrowth2Plugin():
      | ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2Plugin.cpp: In member function ‘virtual void CompuCell3D::OrientedGrowth2Plugin::updateElongationAxis(CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2Plugin.cpp:91:11: warning: unused variable ‘myTargetRadius’ [-Wunused-variable]
   91 |     float myTargetRadius = 0, myTargetHeight = 0;
      |           ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2Plugin.cpp:92:37: warning: unused variable ‘volumeRatio’ [-Wunused-variable]
   92 |     float api_rad = 0, bas_rad = 0, volumeRatio = 0, currentH = 0;
      |                                     ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2Plugin.cpp:92:54: warning: unused variable ‘currentH’ [-Wunused-variable]
   92 |     float api_rad = 0, bas_rad = 0, volumeRatio = 0, currentH = 0;
      |                                                      ^~~~~~~~
[130/395] /usr/bin/g++ -DOrientedGrowth2Shared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/OrientedGrowth2/CMakeFiles/OrientedGrowth2Shared.dir/OrientedGrowth2PluginProxy.cpp.o -MF core/CompuCell3D/plugins/OrientedGrowth2/CMakeFiles/OrientedGrowth2Shared.dir/OrientedGrowth2PluginProxy.cpp.o.d -o core/CompuCell3D/plugins/OrientedGrowth2/CMakeFiles/OrientedGrowth2Shared.dir/OrientedGrowth2PluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2PluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2Plugin.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2PluginProxy.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[131/395] /usr/bin/g++ -DFMT_SHARED -DFieldExtractor_EXPORTS -DSCN_DISABLE_FAST_FLOAT=0 -DSCN_DISABLE_REGEX=0 -DSCN_REGEX_BACKEND=0 -DVTK9 -Dkiss_fft_scalar=double -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -isystem /usr/include/vtk -isystem /usr/include/vtk/vtkscn/include -isystem /usr/include/vtk/vtkscn -isystem /usr/include/vtk/token -isystem /usr/include/vtk/vtkkissfft -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldExtractor.cpp.o -MF core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldExtractor.cpp.o.d -o core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldExtractor.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:5:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /usr/include/c++/16/bits/locale_classes.h:43,
                 from /usr/include/c++/16/bits/ios_base.h:43,
                 from /usr/include/c++/16/ios:46,
                 from /usr/include/c++/16/istream:42,
                 from /usr/include/c++/16/sstream:42,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Logger/CC3DLogger.h:19,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:3:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:33:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:12,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h:8,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventory.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h: In constructor ‘CompuCell3D::FocalPointPlasticityTrackerData::FocalPointPlasticityTrackerData(CompuCell3D::CellG*, float, float, float, int, float, int, bool, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:81:13: warning: ‘CompuCell3D::FocalPointPlasticityTrackerData::anchorId’ will be initialized after [-Wreorder]
   81 |         int anchorId;
      |             ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:78:14: warning:   ‘bool CompuCell3D::FocalPointPlasticityTrackerData::isInitiator’ [-Wreorder]
   78 |         bool isInitiator;
      |              ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:23:9: warning:   when initialized here [-Wreorder]
   23 |         FocalPointPlasticityTrackerData(CellG *_neighborAddress = 0, float _lambdaDistance = 0.0,
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h: In constructor ‘CompuCell3D::FocalPointPlasticityLinkTrackerData::FocalPointPlasticityLinkTrackerData(float, float, float, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:158:13: warning: ‘CompuCell3D::FocalPointPlasticityLinkTrackerData::anchorId’ will be initialized after [-Wreorder]
  158 |         int anchorId;
      |             ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:156:13: warning:   ‘int CompuCell3D::FocalPointPlasticityLinkTrackerData::initMCS’ [-Wreorder]
  156 |         int initMCS;
      |             ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:115:9: warning:   when initialized here [-Wreorder]
  115 |         FocalPointPlasticityLinkTrackerData(float _lambdaDistance = 0.0, float _targetDistance = 0.0,
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h: In constructor ‘CompuCell3D::FocalPointPlasticityLinkBase::FocalPointPlasticityLinkBase()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:50:16: warning: ‘CompuCell3D::FocalPointPlasticityLinkBase::initiated’ will be initialized after [-Wreorder]
   50 |         CellG *initiated;
      |                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:47:18: warning:   ‘CompuCell3D::Potts3D* CompuCell3D::FocalPointPlasticityLinkBase::potts’ [-Wreorder]
   47 |         Potts3D *potts;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:61:9: warning:   when initialized here [-Wreorder]
   61 |         FocalPointPlasticityLinkBase() :
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:30:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.h: In constructor ‘CompuCell3D::FieldExtractor::FieldExtractor()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.h:267:23: warning: ‘CompuCell3D::FieldExtractor::fsPtr’ will be initialized after [-Wreorder]
  267 |         FieldStorage *fsPtr;
      |                       ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.h:58:18: warning:   ‘CompuCell3D::Potts3D* CompuCell3D::FieldExtractor::potts’ [-Wreorder]
   58 |         Potts3D *potts;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:32:1: warning:   when initialized here [-Wreorder]
   32 | FieldExtractor::FieldExtractor() : fsPtr(nullptr), potts(nullptr), sim(nullptr) {
      | ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual void CompuCell3D::FieldExtractor::fillCellFieldData2DCartesian(vtk_obj_addr_int_t, vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:403:23: warning: unused variable ‘cellId’ [-Wunused-variable]
  403 |             vtkIdType cellId = _cellsArray->InsertNextCell(4);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:363:9: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=]
  363 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual void CompuCell3D::FieldExtractor::fillCellFieldData2DHex(vtk_obj_addr_int_t, vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:480:23: warning: unused variable ‘cellId’ [-Wunused-variable]
  480 |             vtkIdType cellId = _hexCellsArray->InsertNextCell(6);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:440:9: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=]
  440 |     int offset=0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual void CompuCell3D::FieldExtractor::fillBorderData2D(vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:521:9: warning: unused variable ‘k’ [-Wunused-variable]
  521 |     int k=0;
      |         ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual void CompuCell3D::FieldExtractor::fillBorderData2DHex(vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:630:9: warning: unused variable ‘k’ [-Wunused-variable]
  630 |     int k=0;
      |         ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual void CompuCell3D::FieldExtractor::fillClusterBorderData2D(vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1060:9: warning: unused variable ‘k’ [-Wunused-variable]
 1060 |     int k=0;
      |         ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual void CompuCell3D::FieldExtractor::fillClusterBorderData2DHex(vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1176:9: warning: unused variable ‘k’ [-Wunused-variable]
 1176 |     int k=0;
      |         ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual void CompuCell3D::FieldExtractor::fillCentroidData2D(vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1596:15: warning: unused variable ‘cellVol’ [-Wunused-variable]
 1596 |         float cellVol = (float) cell->volume;
      |               ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1588:11: warning: unused variable ‘x’ [-Wunused-variable]
 1588 |     float x, y, z;
      |           ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1588:14: warning: unused variable ‘y’ [-Wunused-variable]
 1588 |     float x, y, z;
      |              ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1588:17: warning: unused variable ‘z’ [-Wunused-variable]
 1588 |     float x, y, z;
      |                 ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual bool CompuCell3D::FieldExtractor::fillScalarFieldData2DHex(vtk_obj_addr_int_t, vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1929:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 1929 |             vtkIdType cellId = _hexCellsArray->InsertNextCell(6);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1898:9: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=]
 1898 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual bool CompuCell3D::FieldExtractor::fillScalarFieldData2DCartesian(vtk_obj_addr_int_t, vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:2010:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 2010 |             vtkIdType cellId = _cartesianCellsArray->InsertNextCell(4);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1976:9: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=]
 1976 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual bool CompuCell3D::FieldExtractor::fillScalarFieldCellLevelData2DHex(vtk_obj_addr_int_t, vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:2095:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 2095 |             vtkIdType cellId = _hexCellsArray->InsertNextCell(6);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:2055:9: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=]
 2055 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual bool CompuCell3D::FieldExtractor::fillScalarFieldCellLevelData2DCartesian(vtk_obj_addr_int_t, vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:2188:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 2188 |             vtkIdType cellId = _cartesianCellsArray->InsertNextCell(4);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:2143:9: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=]
 2143 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual bool CompuCell3D::FieldExtractor::fillVectorFieldData2D(vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:2464:21: warning: unused variable ‘offset’ [-Wunused-variable]
 2464 |                 int offset = i + j * dim[1];
      |                     ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:2505:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::tuple<short int, short int, float, float> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 2505 |         for (int i = 0; i < globalPoints.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:2456:15: warning: variable ‘vecTmpCoord’ set but not used [-Wunused-but-set-variable=]
 2456 |         float vecTmpCoord[3];
      |               ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:2458:16: warning: unused variable ‘con’ [-Wunused-variable]
 2458 |         double con;
      |                ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual bool CompuCell3D::FieldExtractor::fillVectorFieldData2DHex(vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:2553:21: warning: unused variable ‘offset’ [-Wunused-variable]
 2553 |                 int offset = i + j * dim[1];
      |                     ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:2600:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::tuple<double, double, float, float> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 2600 |         for (int i = 0; i < globalPoints.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual bool CompuCell3D::FieldExtractor::fillVectorFieldData3D(vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:2667:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::tuple<short int, short int, short int, float, float, float> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 2667 |         for (int i = 0; i < globalPoints.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual bool CompuCell3D::FieldExtractor::fillVectorFieldData3DHex(vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:2709:47: warning: variable ‘hexCoords’ set but not used [-Wunused-but-set-variable=]
 2709 |                         Coordinates3D<double> hexCoords = HexCoordXY(pt.x, pt.y, pt.z);
      |                                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:2735:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::tuple<double, double, double, float, float, float> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 2735 |         for (int i = 0; i < globalPoints.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:2697:13: warning: unused variable ‘pt_z’ [-Wunused-variable]
 2697 |         int pt_z;
      |             ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual bool CompuCell3D::FieldExtractor::fillVectorFieldCellLevelData2D(vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:2790:21: warning: unused variable ‘dataPoint’ [-Wunused-variable]
 2790 |                 int dataPoint = i + j * dim[1];
      |                     ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:2849:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::tuple<long int, float, float, float, float> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 2849 |         for (int i = 0; i < globalPoints.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:2773:9: warning: unused variable ‘numPoints’ [-Wunused-variable]
 2773 |     int numPoints = dim[1] * dim[0];
      |         ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual bool CompuCell3D::FieldExtractor::fillVectorFieldCellLevelData2DHex(vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:2903:21: warning: unused variable ‘offset’ [-Wunused-variable]
 2903 |                 int offset = i + j * dim[1];
      |                     ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:2961:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::tuple<long int, double, double, float, float> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 2961 |         for (int i = 0; i < globalPoints.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual bool CompuCell3D::FieldExtractor::fillVectorFieldCellLevelData3D(vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:3044:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::tuple<long int, short int, short int, short int, float, float, float> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 3044 |         for (int i = 0; i < globalPoints.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual bool CompuCell3D::FieldExtractor::fillVectorFieldCellLevelData3DHex(vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:3131:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::tuple<long int, double, double, double, float, float, float> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 3131 |         for (int i = 0; i < globalPoints.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual void CompuCell3D::FieldExtractor::fillCellFieldGlyphs2D(vtk_obj_addr_int_t, vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:3311:9: warning: variable ‘type’ set but not used [-Wunused-but-set-variable=]
 3311 |     int type;
      |         ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual void CompuCell3D::FieldExtractor::fillConFieldGlyphs2D(std::string, vtk_obj_addr_int_t, vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:3938:13: warning: unused variable ‘cell_type’ [-Wunused-variable]
 3938 |         int cell_type = cell_id_type_pair.second;
      |             ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:3909:9: warning: variable ‘type’ set but not used [-Wunused-but-set-variable=]
 3909 |     int type;
      |         ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual void CompuCell3D::FieldExtractor::fillScalarFieldGlyphs2D(std::string, vtk_obj_addr_int_t, vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:4039:13: warning: unused variable ‘cell_type’ [-Wunused-variable]
 4039 |         int cell_type = cell_id_type_pair.second;
      |             ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:4010:9: warning: variable ‘type’ set but not used [-Wunused-but-set-variable=]
 4010 |     int type;
      |         ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In member function ‘virtual void CompuCell3D::FieldExtractor::fillScalarFieldCellLevelGlyphs2D(std::string, vtk_obj_addr_int_t, vtk_obj_addr_int_t, vtk_obj_addr_int_t, std::string, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:4140:13: warning: unused variable ‘cell_type’ [-Wunused-variable]
 4140 |         int cell_type = cell_id_type_pair.second;
      |             ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:4111:9: warning: variable ‘type’ set but not used [-Wunused-but-set-variable=]
 4111 |     int type;
      |         ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In instantiation of ‘bool CompuCell3D::FieldExtractor::fillConFieldData2DCartesianTyped(vtkDoubleArray*, vtkCellArray*, vtkPoints*, CompuCell3D::Field3D<T>*, std::string, int) [with T = char; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:49:68:   required from here
   49 |                 return this->fillConFieldData2DCartesianTyped<char>(conArray, _cartesianCellsArray, _pointsArray, static_cast<Field3D<char>*>(ptr), _plane, _pos);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1774:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 1774 |             vtkIdType cellId = _cartesianCellsArray->InsertNextCell(4);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1744:9: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=]
 1744 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In instantiation of ‘bool CompuCell3D::FieldExtractor::fillConFieldData2DCartesianTyped(vtkDoubleArray*, vtkCellArray*, vtkPoints*, CompuCell3D::Field3D<T>*, std::string, int) [with T = unsigned char; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:52:77:   required from here
   52 |                 return this->fillConFieldData2DCartesianTyped<unsigned char>(conArray, _cartesianCellsArray, _pointsArray, static_cast<Field3D<unsigned char>*>(ptr), _plane, _pos);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1774:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 1774 |             vtkIdType cellId = _cartesianCellsArray->InsertNextCell(4);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1744:9: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=]
 1744 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In instantiation of ‘bool CompuCell3D::FieldExtractor::fillConFieldData2DCartesianTyped(vtkDoubleArray*, vtkCellArray*, vtkPoints*, CompuCell3D::Field3D<T>*, std::string, int) [with T = short int; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:55:69:   required from here
   55 |                 return this->fillConFieldData2DCartesianTyped<short>(conArray, _cartesianCellsArray, _pointsArray, static_cast<Field3D<short>*>(ptr), _plane, _pos);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1774:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 1774 |             vtkIdType cellId = _cartesianCellsArray->InsertNextCell(4);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1744:9: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=]
 1744 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In instantiation of ‘bool CompuCell3D::FieldExtractor::fillConFieldData2DCartesianTyped(vtkDoubleArray*, vtkCellArray*, vtkPoints*, CompuCell3D::Field3D<T>*, std::string, int) [with T = short unsigned int; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:58:78:   required from here
   58 |                 return this->fillConFieldData2DCartesianTyped<unsigned short>(conArray, _cartesianCellsArray, _pointsArray, static_cast<Field3D<unsigned short>*>(ptr), _plane, _pos);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1774:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 1774 |             vtkIdType cellId = _cartesianCellsArray->InsertNextCell(4);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1744:9: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=]
 1744 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In instantiation of ‘bool CompuCell3D::FieldExtractor::fillConFieldData2DCartesianTyped(vtkDoubleArray*, vtkCellArray*, vtkPoints*, CompuCell3D::Field3D<T>*, std::string, int) [with T = int; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:61:67:   required from here
   61 |                 return this->fillConFieldData2DCartesianTyped<int>(conArray, _cartesianCellsArray, _pointsArray, static_cast<Field3D<int>*>(ptr), _plane, _pos);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1774:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 1774 |             vtkIdType cellId = _cartesianCellsArray->InsertNextCell(4);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1744:9: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=]
 1744 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In instantiation of ‘bool CompuCell3D::FieldExtractor::fillConFieldData2DCartesianTyped(vtkDoubleArray*, vtkCellArray*, vtkPoints*, CompuCell3D::Field3D<T>*, std::string, int) [with T = unsigned int; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:64:76:   required from here
   64 |                 return this->fillConFieldData2DCartesianTyped<unsigned int>(conArray, _cartesianCellsArray, _pointsArray, static_cast<Field3D<unsigned int>*>(ptr), _plane, _pos);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1774:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 1774 |             vtkIdType cellId = _cartesianCellsArray->InsertNextCell(4);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1744:9: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=]
 1744 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In instantiation of ‘bool CompuCell3D::FieldExtractor::fillConFieldData2DCartesianTyped(vtkDoubleArray*, vtkCellArray*, vtkPoints*, CompuCell3D::Field3D<T>*, std::string, int) [with T = long int; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:67:68:   required from here
   67 |                 return this->fillConFieldData2DCartesianTyped<long>(conArray, _cartesianCellsArray, _pointsArray, static_cast<Field3D<long>*>(ptr), _plane, _pos);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1774:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 1774 |             vtkIdType cellId = _cartesianCellsArray->InsertNextCell(4);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1744:9: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=]
 1744 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In instantiation of ‘bool CompuCell3D::FieldExtractor::fillConFieldData2DCartesianTyped(vtkDoubleArray*, vtkCellArray*, vtkPoints*, CompuCell3D::Field3D<T>*, std::string, int) [with T = long unsigned int; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:70:77:   required from here
   70 |                 return this->fillConFieldData2DCartesianTyped<unsigned long>(conArray, _cartesianCellsArray, _pointsArray, static_cast<Field3D<unsigned long>*>(ptr), _plane, _pos);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1774:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 1774 |             vtkIdType cellId = _cartesianCellsArray->InsertNextCell(4);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1744:9: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=]
 1744 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In instantiation of ‘bool CompuCell3D::FieldExtractor::fillConFieldData2DCartesianTyped(vtkDoubleArray*, vtkCellArray*, vtkPoints*, CompuCell3D::Field3D<T>*, std::string, int) [with T = float; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:73:69:   required from here
   73 |                 return this->fillConFieldData2DCartesianTyped<float>(conArray, _cartesianCellsArray, _pointsArray, static_cast<Field3D<float>*>(ptr), _plane, _pos);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1774:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 1774 |             vtkIdType cellId = _cartesianCellsArray->InsertNextCell(4);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1744:9: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=]
 1744 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In instantiation of ‘bool CompuCell3D::FieldExtractor::fillConFieldData2DCartesianTyped(vtkDoubleArray*, vtkCellArray*, vtkPoints*, CompuCell3D::Field3D<T>*, std::string, int) [with T = double; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:76:70:   required from here
   76 |                 return this->fillConFieldData2DCartesianTyped<double>(conArray, _cartesianCellsArray, _pointsArray, static_cast<Field3D<double>*>(ptr), _plane, _pos);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1774:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 1774 |             vtkIdType cellId = _cartesianCellsArray->InsertNextCell(4);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1744:9: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=]
 1744 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In instantiation of ‘bool CompuCell3D::FieldExtractor::fillConFieldData2DHexTyped(vtkDoubleArray*, vtkCellArray*, vtkPoints*, CompuCell3D::Field3D<T>*, std::string, int) [with T = char; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:85:62:   required from here
   85 |                 return this->fillConFieldData2DHexTyped<char>(conArray, _cartesianCellsArray, _pointsArray, static_cast<Field3D<char>*>(ptr), _plane, _pos);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1711:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 1711 |             vtkIdType cellId = _hexCellsArray->InsertNextCell(6);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1682:9: warning: unused variable ‘offset’ [-Wunused-variable]
 1682 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In instantiation of ‘bool CompuCell3D::FieldExtractor::fillConFieldData2DHexTyped(vtkDoubleArray*, vtkCellArray*, vtkPoints*, CompuCell3D::Field3D<T>*, std::string, int) [with T = unsigned char; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:88:71:   required from here
   88 |                 return this->fillConFieldData2DHexTyped<unsigned char>(conArray, _cartesianCellsArray, _pointsArray, static_cast<Field3D<unsigned char>*>(ptr), _plane, _pos);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1711:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 1711 |             vtkIdType cellId = _hexCellsArray->InsertNextCell(6);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1682:9: warning: unused variable ‘offset’ [-Wunused-variable]
 1682 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In instantiation of ‘bool CompuCell3D::FieldExtractor::fillConFieldData2DHexTyped(vtkDoubleArray*, vtkCellArray*, vtkPoints*, CompuCell3D::Field3D<T>*, std::string, int) [with T = short int; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:91:63:   required from here
   91 |                 return this->fillConFieldData2DHexTyped<short>(conArray, _cartesianCellsArray, _pointsArray, static_cast<Field3D<short>*>(ptr), _plane, _pos);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1711:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 1711 |             vtkIdType cellId = _hexCellsArray->InsertNextCell(6);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1682:9: warning: unused variable ‘offset’ [-Wunused-variable]
 1682 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In instantiation of ‘bool CompuCell3D::FieldExtractor::fillConFieldData2DHexTyped(vtkDoubleArray*, vtkCellArray*, vtkPoints*, CompuCell3D::Field3D<T>*, std::string, int) [with T = short unsigned int; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:94:72:   required from here
   94 |                 return this->fillConFieldData2DHexTyped<unsigned short>(conArray, _cartesianCellsArray, _pointsArray, static_cast<Field3D<unsigned short>*>(ptr), _plane, _pos);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1711:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 1711 |             vtkIdType cellId = _hexCellsArray->InsertNextCell(6);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1682:9: warning: unused variable ‘offset’ [-Wunused-variable]
 1682 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In instantiation of ‘bool CompuCell3D::FieldExtractor::fillConFieldData2DHexTyped(vtkDoubleArray*, vtkCellArray*, vtkPoints*, CompuCell3D::Field3D<T>*, std::string, int) [with T = int; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:97:61:   required from here
   97 |                 return this->fillConFieldData2DHexTyped<int>(conArray, _cartesianCellsArray, _pointsArray, static_cast<Field3D<int>*>(ptr), _plane, _pos);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1711:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 1711 |             vtkIdType cellId = _hexCellsArray->InsertNextCell(6);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1682:9: warning: unused variable ‘offset’ [-Wunused-variable]
 1682 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In instantiation of ‘bool CompuCell3D::FieldExtractor::fillConFieldData2DHexTyped(vtkDoubleArray*, vtkCellArray*, vtkPoints*, CompuCell3D::Field3D<T>*, std::string, int) [with T = unsigned int; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:100:70:   required from here
  100 |                 return this->fillConFieldData2DHexTyped<unsigned int>(conArray, _cartesianCellsArray, _pointsArray, static_cast<Field3D<unsigned int>*>(ptr), _plane, _pos);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1711:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 1711 |             vtkIdType cellId = _hexCellsArray->InsertNextCell(6);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1682:9: warning: unused variable ‘offset’ [-Wunused-variable]
 1682 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In instantiation of ‘bool CompuCell3D::FieldExtractor::fillConFieldData2DHexTyped(vtkDoubleArray*, vtkCellArray*, vtkPoints*, CompuCell3D::Field3D<T>*, std::string, int) [with T = long int; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:103:62:   required from here
  103 |                 return this->fillConFieldData2DHexTyped<long>(conArray, _cartesianCellsArray, _pointsArray, static_cast<Field3D<long>*>(ptr), _plane, _pos);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1711:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 1711 |             vtkIdType cellId = _hexCellsArray->InsertNextCell(6);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1682:9: warning: unused variable ‘offset’ [-Wunused-variable]
 1682 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In instantiation of ‘bool CompuCell3D::FieldExtractor::fillConFieldData2DHexTyped(vtkDoubleArray*, vtkCellArray*, vtkPoints*, CompuCell3D::Field3D<T>*, std::string, int) [with T = long unsigned int; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:106:71:   required from here
  106 |                 return this->fillConFieldData2DHexTyped<unsigned long>(conArray, _cartesianCellsArray, _pointsArray, static_cast<Field3D<unsigned long>*>(ptr), _plane, _pos);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1711:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 1711 |             vtkIdType cellId = _hexCellsArray->InsertNextCell(6);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1682:9: warning: unused variable ‘offset’ [-Wunused-variable]
 1682 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In instantiation of ‘bool CompuCell3D::FieldExtractor::fillConFieldData2DHexTyped(vtkDoubleArray*, vtkCellArray*, vtkPoints*, CompuCell3D::Field3D<T>*, std::string, int) [with T = float; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:109:63:   required from here
  109 |                 return this->fillConFieldData2DHexTyped<float>(conArray, _cartesianCellsArray, _pointsArray, static_cast<Field3D<float>*>(ptr), _plane, _pos);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1711:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 1711 |             vtkIdType cellId = _hexCellsArray->InsertNextCell(6);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1682:9: warning: unused variable ‘offset’ [-Wunused-variable]
 1682 |     int offset = 0;
      |         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp: In instantiation of ‘bool CompuCell3D::FieldExtractor::fillConFieldData2DHexTyped(vtkDoubleArray*, vtkCellArray*, vtkPoints*, CompuCell3D::Field3D<T>*, std::string, int) [with T = double; std::string = std::__cxx11::basic_string<char>]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:112:64:   required from here
  112 |                 return this->fillConFieldData2DHexTyped<double>(conArray, _cartesianCellsArray, _pointsArray, static_cast<Field3D<double>*>(ptr), _plane, _pos);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1711:23: warning: unused variable ‘cellId’ [-Wunused-variable]
 1711 |             vtkIdType cellId = _hexCellsArray->InsertNextCell(6);
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldExtractor.cpp:1682:9: warning: unused variable ‘offset’ [-Wunused-variable]
 1682 |     int offset = 0;
      |         ^~~~~~
[132/395] /usr/bin/g++ -DContactOrientationShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/ContactOrientation/CMakeFiles/ContactOrientationShared.dir/ContactOrientationPlugin.cpp.o -MF core/CompuCell3D/plugins/ContactOrientation/CMakeFiles/ContactOrientationShared.dir/ContactOrientationPlugin.cpp.o.d -o core/CompuCell3D/plugins/ContactOrientation/CMakeFiles/ContactOrientationShared.dir/ContactOrientationPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.cpp:5:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.h: In constructor ‘CompuCell3D::ContactOrientationPlugin::ContactOrientationPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.h:41:44: warning: ‘CompuCell3D::ContactOrientationPlugin::lockPtr’ will be initialized after [-Wreorder]
   41 |         ParallelUtilsOpenMP::OpenMPLock_t *lockPtr;
      |                                            ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.h:33:25: warning:   ‘CC3DXMLElement* CompuCell3D::ContactOrientationPlugin::xmlData’ [-Wreorder]
   33 |         CC3DXMLElement *xmlData;
      |                         ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.cpp:8:1: warning:   when initialized here [-Wreorder]
    8 | ContactOrientationPlugin::ContactOrientationPlugin() :
      | ^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.h:50:36: warning: ‘CompuCell3D::ContactOrientationPlugin::cellFieldG’ will be initialized after [-Wreorder]
   50 |         WatchableField3D<CellG *> *cellFieldG;
      |                                    ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.h:49:27: warning:   ‘CompuCell3D::BoundaryStrategy* CompuCell3D::ContactOrientationPlugin::boundaryStrategy’ [-Wreorder]
   49 |         BoundaryStrategy *boundaryStrategy;
      |                           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.cpp:8:1: warning:   when initialized here [-Wreorder]
    8 | ContactOrientationPlugin::ContactOrientationPlugin() :
      | ^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.h:49:27: warning: ‘CompuCell3D::ContactOrientationPlugin::boundaryStrategy’ will be initialized after [-Wreorder]
   49 |         BoundaryStrategy *boundaryStrategy;
      |                           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.h:47:20: warning:   ‘CompuCell3D::Automaton* CompuCell3D::ContactOrientationPlugin::automaton’ [-Wreorder]
   47 |         Automaton *automaton;
      |                    ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.cpp:8:1: warning:   when initialized here [-Wreorder]
    8 | ContactOrientationPlugin::ContactOrientationPlugin() :
      | ^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.cpp: In member function ‘virtual double CompuCell3D::ContactOrientationPlugin::changeEnergy(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.cpp:71:18: warning: unused variable ‘token’ [-Wunused-variable]
   71 |     unsigned int token = 0;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.cpp:72:12: warning: unused variable ‘distance’ [-Wunused-variable]
   72 |     double distance = 0;
      |            ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.cpp: In member function ‘virtual void CompuCell3D::ContactOrientationPlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.cpp:277:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  277 |     for (int i = 0; i < energyVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~
[133/395] /usr/bin/g++ -DContactOrientationShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/ContactOrientation/CMakeFiles/ContactOrientationShared.dir/ContactOrientationPluginProxy.cpp.o -MF core/CompuCell3D/plugins/ContactOrientation/CMakeFiles/ContactOrientationShared.dir/ContactOrientationPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/ContactOrientation/CMakeFiles/ContactOrientationShared.dir/ContactOrientationPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPluginProxy.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[134/395] /usr/bin/g++ -DBoundaryMonitorShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/BoundaryMonitor/CMakeFiles/BoundaryMonitorShared.dir/BoundaryMonitorPlugin.cpp.o -MF core/CompuCell3D/plugins/BoundaryMonitor/CMakeFiles/BoundaryMonitorShared.dir/BoundaryMonitorPlugin.cpp.o.d -o core/CompuCell3D/plugins/BoundaryMonitor/CMakeFiles/BoundaryMonitorShared.dir/BoundaryMonitorPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryMonitor/BoundaryMonitorPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryMonitor/BoundaryMonitorPlugin.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryMonitor/BoundaryMonitorPlugin.cpp:6:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryMonitor/BoundaryMonitorPlugin.h: In constructor ‘CompuCell3D::BoundaryMonitorPlugin::BoundaryMonitorPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryMonitor/BoundaryMonitorPlugin.h:39:44: warning: ‘CompuCell3D::BoundaryMonitorPlugin::lockPtr’ will be initialized after [-Wreorder]
   39 |         ParallelUtilsOpenMP::OpenMPLock_t *lockPtr;
      |                                            ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryMonitor/BoundaryMonitorPlugin.h:31:25: warning:   ‘CC3DXMLElement* CompuCell3D::BoundaryMonitorPlugin::xmlData’ [-Wreorder]
   31 |         CC3DXMLElement *xmlData;
      |                         ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryMonitor/BoundaryMonitorPlugin.cpp:9:1: warning:   when initialized here [-Wreorder]
    9 | BoundaryMonitorPlugin::BoundaryMonitorPlugin() :
      | ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryMonitor/BoundaryMonitorPlugin.h:44:36: warning: ‘CompuCell3D::BoundaryMonitorPlugin::cellFieldG’ will be initialized after [-Wreorder]
   44 |         WatchableField3D<CellG *> *cellFieldG;
      |                                    ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryMonitor/BoundaryMonitorPlugin.h:43:27: warning:   ‘CompuCell3D::BoundaryStrategy* CompuCell3D::BoundaryMonitorPlugin::boundaryStrategy’ [-Wreorder]
   43 |         BoundaryStrategy *boundaryStrategy;
      |                           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryMonitor/BoundaryMonitorPlugin.cpp:9:1: warning:   when initialized here [-Wreorder]
    9 | BoundaryMonitorPlugin::BoundaryMonitorPlugin() :
      | ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<unsigned char>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:952:11:   required from ‘class CompuCell3D::Array3DCUDA<unsigned char>’
  952 |     class Array3DCUDA : public Field3DImpl<T> {
      |           ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryMonitor/BoundaryMonitorPlugin.cpp:23:16:   required from here
   23 |         delete boundaryArray;
      |                ^~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = unsigned char]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = unsigned char]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DCUDA<unsigned char>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryMonitor/BoundaryMonitorPlugin.cpp:23:16:   required from here
   23 |         delete boundaryArray;
      |                ^~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:125:23: warning: ‘CompuCell3D::Dim3D CompuCell3D::Field3DImpl<T>::getDim() const [with T = unsigned char]’ was hidden [-Woverloaded-virtual=]
  125 |         virtual Dim3D getDim() const { return dim; }
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:1029:15: note:   by ‘CompuCell3D::Dim3D CompuCell3D::Array3DCUDA<T>::getDim() [with T = unsigned char]’
 1029 |         Dim3D getDim() { return Field3DImpl<T>::dim; }
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryMonitor/BoundaryMonitorPlugin.cpp: In member function ‘virtual void CompuCell3D::BoundaryMonitorPlugin::field3DChange(const CompuCell3D::Point3D&, CompuCell3D::CellG*, CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryMonitor/BoundaryMonitorPlugin.cpp:74:12: warning: variable ‘nnCell’ set but not used [-Wunused-but-set-variable=]
   74 |     CellG *nnCell; // neighbor of a neighbor cell
      |            ^~~~~~
[135/395] /usr/bin/g++ -DBoundaryMonitorShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/BoundaryMonitor/CMakeFiles/BoundaryMonitorShared.dir/BoundaryMonitorPluginProxy.cpp.o -MF core/CompuCell3D/plugins/BoundaryMonitor/CMakeFiles/BoundaryMonitorShared.dir/BoundaryMonitorPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/BoundaryMonitor/CMakeFiles/BoundaryMonitorShared.dir/BoundaryMonitorPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryMonitor/BoundaryMonitorPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryMonitor/BoundaryMonitorPlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryMonitor/BoundaryMonitorPluginProxy.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[136/395] /usr/bin/g++ -DPolarization23Shared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/Polarization23/CMakeFiles/Polarization23Shared.dir/Polarization23Plugin.cpp.o -MF core/CompuCell3D/plugins/Polarization23/CMakeFiles/Polarization23Shared.dir/Polarization23Plugin.cpp.o.d -o core/CompuCell3D/plugins/Polarization23/CMakeFiles/Polarization23Shared.dir/Polarization23Plugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.cpp:5:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.h: In constructor ‘CompuCell3D::Polarization23Plugin::Polarization23Plugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.h:39:44: warning: ‘CompuCell3D::Polarization23Plugin::lockPtr’ will be initialized after [-Wreorder]
   39 |         ParallelUtilsOpenMP::OpenMPLock_t *lockPtr;
      |                                            ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.h:31:25: warning:   ‘CC3DXMLElement* CompuCell3D::Polarization23Plugin::xmlData’ [-Wreorder]
   31 |         CC3DXMLElement *xmlData;
      |                         ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.cpp:8:1: warning:   when initialized here [-Wreorder]
    8 | Polarization23Plugin::Polarization23Plugin() :
      | ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.h:44:36: warning: ‘CompuCell3D::Polarization23Plugin::cellFieldG’ will be initialized after [-Wreorder]
   44 |         WatchableField3D<CellG *> *cellFieldG;
      |                                    ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.h:43:27: warning:   ‘CompuCell3D::BoundaryStrategy* CompuCell3D::Polarization23Plugin::boundaryStrategy’ [-Wreorder]
   43 |         BoundaryStrategy *boundaryStrategy;
      |                           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.cpp:8:1: warning:   when initialized here [-Wreorder]
    8 | Polarization23Plugin::Polarization23Plugin() :
      | ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.cpp: In member function ‘virtual double CompuCell3D::Polarization23Plugin::changeEnergy(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.cpp:90:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::CellG*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   90 |         for (int i = 0; i < compartments.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.cpp:89:16: warning: unused variable ‘clusterSurface’ [-Wunused-variable]
   89 |         double clusterSurface;
      |                ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.cpp:136:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::CellG*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  136 |         for (int i = 0; i < compartments.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.cpp:135:16: warning: unused variable ‘clusterSurface’ [-Wunused-variable]
  135 |         double clusterSurface;
      |                ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.cpp: In member function ‘void CompuCell3D::Polarization23Plugin::setPolarizationVector(CompuCell3D::CellG*, Vector3&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.cpp:297:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::CellG*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  297 |     for (int i = 0; i < compartments.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.cpp: In member function ‘void CompuCell3D::Polarization23Plugin::setPolarizationMarkers(CompuCell3D::CellG*, unsigned char, unsigned char)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.cpp:317:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::CellG*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  317 |     for (int i = 0; i < compartments.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.cpp: In member function ‘void CompuCell3D::Polarization23Plugin::setLambdaPolarization(CompuCell3D::CellG*, double)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.cpp:341:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::CellG*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  341 |     for (int i = 0; i < compartments.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~
[137/395] /usr/bin/g++ -DPolarization23Shared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/Polarization23/CMakeFiles/Polarization23Shared.dir/Polarization23PluginProxy.cpp.o -MF core/CompuCell3D/plugins/Polarization23/CMakeFiles/Polarization23Shared.dir/Polarization23PluginProxy.cpp.o.d -o core/CompuCell3D/plugins/Polarization23/CMakeFiles/Polarization23Shared.dir/Polarization23PluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23PluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23PluginProxy.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[138/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/ClusterSurfaceTracker/libCC3DClusterSurfaceTracker.so.4.9.0  core/CompuCell3D/plugins/ClusterSurfaceTracker/libCC3DClusterSurfaceTracker.so.4.9 core/CompuCell3D/plugins/ClusterSurfaceTracker/libCC3DClusterSurfaceTracker.so && :
[139/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/CellType/libCC3DCellType.so.4.9.0  core/CompuCell3D/plugins/CellType/libCC3DCellType.so.4.9 core/CompuCell3D/plugins/CellType/libCC3DCellType.so && :
[140/395] /usr/bin/g++ -DClusterSurfaceShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/ClusterSurface/CMakeFiles/ClusterSurfaceShared.dir/ClusterSurfacePlugin.cpp.o -MF core/CompuCell3D/plugins/ClusterSurface/CMakeFiles/ClusterSurfaceShared.dir/ClusterSurfacePlugin.cpp.o.d -o core/CompuCell3D/plugins/ClusterSurface/CMakeFiles/ClusterSurfaceShared.dir/ClusterSurfacePlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.cpp:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.h: In constructor ‘CompuCell3D::ClusterSurfacePlugin::ClusterSurfacePlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.h:43:44: warning: ‘CompuCell3D::ClusterSurfacePlugin::lockPtr’ will be initialized after [-Wreorder]
   43 |         ParallelUtilsOpenMP::OpenMPLock_t *lockPtr;
      |                                            ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.h:35:25: warning:   ‘CC3DXMLElement* CompuCell3D::ClusterSurfacePlugin::xmlData’ [-Wreorder]
   35 |         CC3DXMLElement *xmlData;
      |                         ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.cpp:10:1: warning:   when initialized here [-Wreorder]
   10 | ClusterSurfacePlugin::ClusterSurfacePlugin() :
      | ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.h:61:16: warning: ‘CompuCell3D::ClusterSurfacePlugin::scaleClusterSurface’ will be initialized after [-Wreorder]
   61 |         double scaleClusterSurface;
      |                ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.h:47:27: warning:   ‘CompuCell3D::BoundaryStrategy* CompuCell3D::ClusterSurfacePlugin::boundaryStrategy’ [-Wreorder]
   47 |         BoundaryStrategy *boundaryStrategy;
      |                           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.cpp:10:1: warning:   when initialized here [-Wreorder]
   10 | ClusterSurfacePlugin::ClusterSurfacePlugin() :
      | ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.cpp: In member function ‘void CompuCell3D::ClusterSurfacePlugin::setTargetAndLambdaClusterSurface(CompuCell3D::CellG*, float, float)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.cpp:73:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::CellG*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   73 |     for (int i = 0; i < compartments.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.cpp: In member function ‘std::pair<float, float> CompuCell3D::ClusterSurfacePlugin::getTargetAndLambdaVolume(const CompuCell3D::CellG*) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.cpp:80:87: note: parameter passing for argument of type ‘std::pair<float, float>’ when C++17 is enabled changed to match C++14 in GCC 10.1
   80 | pair<float, float> ClusterSurfacePlugin::getTargetAndLambdaVolume(const CellG *_cell) const {
      |                                                                                       ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.cpp: In member function ‘std::pair<double, double> CompuCell3D::ClusterSurfacePlugin::getNewOldClusterSurfaceDiffs(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.cpp:86:113: note: parameter passing for argument of type ‘std::pair<double, double>’ when C++17 is enabled changed to match C++14 in GCC 10.1
   86 | ClusterSurfacePlugin::getNewOldClusterSurfaceDiffs(const Point3D &pt, const CellG *newCell, const CellG *oldCell) {
      |                                                                                                                 ^
In file included from /usr/include/c++/16/bits/stl_algobase.h:63:
/usr/include/c++/16/bits/stl_pair.h: In instantiation of ‘constexpr std::pair<typename std::__strip_reference_wrapper<typename std::decay<_Tp>::type>::__type, typename std::__strip_reference_wrapper<typename std::decay<_Tp2>::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = const float&; _T2 = const float&; typename __strip_reference_wrapper<typename decay<_Tp>::type>::__type = float; typename decay<_Tp>::type = float; typename __strip_reference_wrapper<typename decay<_Tp2>::type>::__type = float; typename decay<_Tp2>::type = float]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.cpp:81:21:   required from here
   81 |     return make_pair(_cell->targetClusterSurface, _cell->lambdaClusterSurface);
      |            ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/bits/stl_pair.h:1169:5: note: parameter passing for argument of type ‘std::pair<float, float>’ when C++17 is enabled changed to match C++14 in GCC 10.1
 1169 |     make_pair(_T1&& __x, _T2&& __y)
      |     ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.cpp:86:1: note: parameter passing for argument of type ‘std::pair<double, double>’ when C++17 is enabled changed to match C++14 in GCC 10.1
   86 | ClusterSurfacePlugin::getNewOldClusterSurfaceDiffs(const Point3D &pt, const CellG *newCell, const CellG *oldCell) {
      | ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.cpp: In member function ‘CompuCell3D::ClusterSurfacePlugin::getTargetAndLambdaVolume(CompuCell3D::CellG const*) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.cpp:80:20: note: parameter passing for argument of type ‘struct pair’ when C++17 is enabled changed to match C++14 in GCC 10.1
   80 | pair<float, float> ClusterSurfacePlugin::getTargetAndLambdaVolume(const CellG *_cell) const {
      |                    ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.cpp: In member function ‘CompuCell3D::ClusterSurfacePlugin::getNewOldClusterSurfaceDiffs(CompuCell3D::Point3D const&, CompuCell3D::CellG const*, CompuCell3D::CellG const*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.cpp:86:1: note: parameter passing for argument of type ‘struct pair’ when C++17 is enabled changed to match C++14 in GCC 10.1
   86 | ClusterSurfacePlugin::getNewOldClusterSurfaceDiffs(const Point3D &pt, const CellG *newCell, const CellG *oldCell) {
      | ^~~~~~~~~~~~~~~~~~~~
[141/395] /usr/bin/g++ -DClusterSurfaceShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/ClusterSurface/CMakeFiles/ClusterSurfaceShared.dir/ClusterSurfacePluginProxy.cpp.o -MF core/CompuCell3D/plugins/ClusterSurface/CMakeFiles/ClusterSurfaceShared.dir/ClusterSurfacePluginProxy.cpp.o.d -o core/CompuCell3D/plugins/ClusterSurface/CMakeFiles/ClusterSurfaceShared.dir/ClusterSurfacePluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePluginProxy.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[142/395] /usr/bin/g++ -DVolumeTrackerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/VolumeTracker/CMakeFiles/VolumeTrackerShared.dir/VolumeTrackerPlugin.cpp.o -MF core/CompuCell3D/plugins/VolumeTracker/CMakeFiles/VolumeTrackerShared.dir/VolumeTrackerPlugin.cpp.o.d -o core/CompuCell3D/plugins/VolumeTracker/CMakeFiles/VolumeTrackerShared.dir/VolumeTrackerPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VolumeTracker/VolumeTrackerPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VolumeTracker/VolumeTrackerPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VolumeTracker/VolumeTrackerPlugin.cpp:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VolumeTracker/VolumeTrackerPlugin.h: In constructor ‘CompuCell3D::VolumeTrackerPlugin::VolumeTrackerPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VolumeTracker/VolumeTrackerPlugin.h:27:44: warning: ‘CompuCell3D::VolumeTrackerPlugin::lockPtr’ will be initialized after [-Wreorder]
   27 |         ParallelUtilsOpenMP::OpenMPLock_t *lockPtr;
      |                                            ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VolumeTracker/VolumeTrackerPlugin.h:23:18: warning:   ‘CompuCell3D::Potts3D* CompuCell3D::VolumeTrackerPlugin::potts’ [-Wreorder]
   23 |         Potts3D *potts;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VolumeTracker/VolumeTrackerPlugin.cpp:9:1: warning:   when initialized here [-Wreorder]
    9 | VolumeTrackerPlugin::VolumeTrackerPlugin() : pUtils(0), lockPtr(0), potts(0), deadCellG(0) {
      | ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VolumeTracker/VolumeTrackerPlugin.cpp: In member function ‘virtual void CompuCell3D::VolumeTrackerPlugin::handleEvent(CompuCell3D::CC3DEvent&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VolumeTracker/VolumeTrackerPlugin.cpp:71:50: warning: variable ‘ev’ set but not used [-Wunused-but-set-variable=]
   71 |                 CC3DEventChangeNumberOfWorkNodes ev = static_cast<CC3DEventChangeNumberOfWorkNodes&>(_event);
      |                                                  ^~
[143/395] /usr/bin/g++ -DVolumeTrackerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/VolumeTracker/CMakeFiles/VolumeTrackerShared.dir/VolumeTrackerPluginProxy.cpp.o -MF core/CompuCell3D/plugins/VolumeTracker/CMakeFiles/VolumeTrackerShared.dir/VolumeTrackerPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/VolumeTracker/CMakeFiles/VolumeTrackerShared.dir/VolumeTrackerPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VolumeTracker/VolumeTrackerPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VolumeTracker/VolumeTrackerPlugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VolumeTracker/VolumeTrackerPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[144/395] /usr/bin/g++ -DAdhesionFlexShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/AdhesionFlex/CMakeFiles/AdhesionFlexShared.dir/AdhesionFlexPluginProxy.cpp.o -MF core/CompuCell3D/plugins/AdhesionFlex/CMakeFiles/AdhesionFlexShared.dir/AdhesionFlexPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/AdhesionFlex/CMakeFiles/AdhesionFlexShared.dir/AdhesionFlexPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[145/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/link.d -Wl,-soname,libFieldExtractor.so.4.9 -o core/pyinterface/PlayerPythonNew/libFieldExtractor.so.4.9.0 core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldStorage.cpp.o core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldExtractorBase.cpp.o core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldExtractor.cpp.o core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldExtractorCML.cpp.o core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldWriter.cpp.o core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldWriterCML.cpp.o core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldStreamer.cpp.o core/pyinterface/PlayerPythonNew/CMakeFiles/FieldExtractor.dir/FieldCopier.cpp.o  -Wl,-rpath,"\$ORIGIN/../../CompuCell3D/plugins/NeighborTracker:\$ORIGIN/../../CompuCell3D/plugins/FocalPointPlasticity:\$ORIGIN/../../CompuCell3D:\$ORIGIN/../../CompuCell3D/Automaton:\$ORIGIN/../../CompuCell3D/Potts3D:\$ORIGIN/../../muParser/ExpressionEvaluator:\$ORIGIN/../../XMLUtils:\$ORIGIN/../../PublicUtilities:\$ORIGIN/../../CompuCell3D/Boundary:\$ORIGIN/../../CompuCell3D/Field3D:\$ORIGIN/../../Logger:\$ORIGIN/../../muParser:"  core/CompuCell3D/plugins/NeighborTracker/libCC3DNeighborTracker.so.4.9.0  core/CompuCell3D/plugins/FocalPointPlasticity/libCC3DFocalPointPlasticity.so.4.9.0  /usr/lib64/libpython3.14.so  /usr/lib64/libvtkRenderingVolume.so.1  /usr/lib64/libvtkInteractionStyle.so.1  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a  core/muParser/libCC3DmuParser.so.4.9.0  /usr/lib64/libvtkRenderingCore.so.1  /usr/lib64/libvtkIOLegacy.so.1  /usr/lib64/libvtkIOCellGrid.so.1  /usr/lib64/libvtkFiltersCellGrid.so.1  /usr/lib64/libvtkIOCore.so.1  /usr/lib64/libvtkFiltersCore.so.1  /usr/lib64/libvtkCommonExecutionModel.so.1  /usr/lib64/libvtkCommonDataModel.so.1  /usr/lib64/libvtkCommonTransforms.so.1  /usr/lib64/libvtkCommonMisc.so.1  /usr/lib64/libvtkCommonMath.so.1  /usr/lib64/libvtkkissfft.so.1  /usr/lib64/libvtkCommonCore.so.1  /usr/lib64/libfmt.so.11.2.0  /usr/lib64/libvtkscn.so.1  /usr/lib64/libvtktoken.so.1  /usr/lib64/libvtksys.so.1  -ldl && :
[146/395] /usr/bin/g++ -DMitosisShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/Mitosis/CMakeFiles/MitosisShared.dir/MitosisPlugin.cpp.o -MF core/CompuCell3D/plugins/Mitosis/CMakeFiles/MitosisShared.dir/MitosisPlugin.cpp.o.d -o core/CompuCell3D/plugins/Mitosis/CMakeFiles/MitosisShared.dir/MitosisPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisPlugin.cpp: In member function ‘virtual bool CompuCell3D::MitosisPlugin::doMitosis()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisPlugin.cpp:189:30: warning: unused variable ‘token’ [-Wunused-variable]
  189 |                 unsigned int token = 0;
      |                              ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisPlugin.cpp:190:24: warning: unused variable ‘distance’ [-Wunused-variable]
  190 |                 double distance = 0;
      |                        ^~~~~~~~
[147/395] /usr/bin/g++ -DMitosisShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/Mitosis/CMakeFiles/MitosisShared.dir/MitosisPluginProxy.cpp.o -MF core/CompuCell3D/plugins/Mitosis/CMakeFiles/MitosisShared.dir/MitosisPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/Mitosis/CMakeFiles/MitosisShared.dir/MitosisPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisPlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisPluginProxy.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[148/395] /usr/bin/g++ -DAdhesionFlexShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/AdhesionFlex/CMakeFiles/AdhesionFlexShared.dir/AdhesionFlexPlugin.cpp.o -MF core/CompuCell3D/plugins/AdhesionFlex/CMakeFiles/AdhesionFlexShared.dir/AdhesionFlexPlugin.cpp.o.d -o core/CompuCell3D/plugins/AdhesionFlex/CMakeFiles/AdhesionFlexShared.dir/AdhesionFlexPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.h: In constructor ‘CompuCell3D::AdhesionFlexPlugin::AdhesionFlexPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.h:36:44: warning: ‘CompuCell3D::AdhesionFlexPlugin::lockPtr’ will be initialized after [-Wreorder]
   36 |         ParallelUtilsOpenMP::OpenMPLock_t *lockPtr;
      |                                            ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.h:32:25: warning:   ‘CC3DXMLElement* CompuCell3D::AdhesionFlexPlugin::xmlData’ [-Wreorder]
   32 |         CC3DXMLElement *xmlData;
      |                         ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp:10:1: warning:   when initialized here [-Wreorder]
   10 | AdhesionFlexPlugin::AdhesionFlexPlugin() :
      | ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.h:63:13: warning: ‘CompuCell3D::AdhesionFlexPlugin::numberOfAdhesionMolecules’ will be initialized after [-Wreorder]
   63 |         int numberOfAdhesionMolecules;
      |             ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.h:56:33: warning:   ‘double (CompuCell3D::AdhesionFlexPlugin::* CompuCell3D::AdhesionFlexPlugin::adhesionFlexEnergyPtr)(const CompuCell3D::CellG*, const CompuCell3D::CellG*)’ [-Wreorder]
   56 |         adhesionFlexEnergyPtr_t adhesionFlexEnergyPtr;
      |                                 ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp:10:1: warning:   when initialized here [-Wreorder]
   10 | AdhesionFlexPlugin::AdhesionFlexPlugin() :
      | ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.h:56:33: warning: ‘CompuCell3D::AdhesionFlexPlugin::adhesionFlexEnergyPtr’ will be initialized after [-Wreorder]
   56 |         adhesionFlexEnergyPtr_t adhesionFlexEnergyPtr;
      |                                 ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.h:54:14: warning:   ‘bool CompuCell3D::AdhesionFlexPlugin::weightDistance’ [-Wreorder]
   54 |         bool weightDistance;
      |              ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp:10:1: warning:   when initialized here [-Wreorder]
   10 | AdhesionFlexPlugin::AdhesionFlexPlugin() :
      | ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp: In member function ‘virtual void CompuCell3D::AdhesionFlexPlugin::handleEvent(CompuCell3D::CC3DEvent&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp:57:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   57 |         for (int i = 0; i < maxNumberOfWorkNodes; ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp: In member function ‘virtual double CompuCell3D::AdhesionFlexPlugin::changeEnergy(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp:77:18: warning: unused variable ‘token’ [-Wunused-variable]
   77 |     unsigned int token = 0;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp:78:12: warning: variable ‘distance’ set but not used [-Wunused-but-set-variable=]
   78 |     double distance = 0;
      |            ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp: In member function ‘virtual void CompuCell3D::AdhesionFlexPlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp:309:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  309 |     for (int i = 0; i < adhesionMoleculeNameXMLVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp:332:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  332 |     for (int i = 0; i < adhesionMoleculeDensityXMLVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp:376:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  376 |     for (int i = 0; i < bindingParameterXMLVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp:389:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  389 |     for (int i = 0; i < maxNumberOfWorkNodes; ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp: In member function ‘void CompuCell3D::AdhesionFlexPlugin::setAdhesionMoleculeDensityByIndex(CompuCell3D::CellG*, int, float)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp:508:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<float>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  508 |     if (_idx >= adhesionMoleculeDensityVec.size() || _idx < 0)
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp: In member function ‘void CompuCell3D::AdhesionFlexPlugin::setMediumAdhesionMoleculeDensityByIndex(int, float)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp:545:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<float>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  545 |     if (_idx >= adhesionMoleculeDensityVecMedium.size() || _idx < 0)
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp: In member function ‘float CompuCell3D::AdhesionFlexPlugin::getAdhesionMoleculeDensityByIndex(CompuCell3D::CellG*, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp:589:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<float>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  589 |     if (_idx >= adhesionMoleculeDensityVec.size() || _idx < 0) {
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp: In member function ‘float CompuCell3D::AdhesionFlexPlugin::getMediumAdhesionMoleculeDensityByIndex(int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.cpp:616:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<float>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  616 |     if (_idx >= adhesionMoleculeDensityVecMedium.size() || _idx < 0)
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[149/395] /usr/bin/g++ -DChemotaxisShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/Chemotaxis/CMakeFiles/ChemotaxisShared.dir/ChemotaxisPluginProxy.cpp.o -MF core/CompuCell3D/plugins/Chemotaxis/CMakeFiles/ChemotaxisShared.dir/ChemotaxisPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/Chemotaxis/CMakeFiles/ChemotaxisShared.dir/ChemotaxisPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.h:5:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h: In constructor ‘CompuCell3D::ChemotaxisData::ChemotaxisData(float, float, std::string)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:39:21: warning: ‘CompuCell3D::ChemotaxisData::typeName’ will be initialized after [-Wreorder]
   39 |         std::string typeName;
      |                     ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:34:41: warning:   ‘float (CompuCell3D::ChemotaxisPlugin::* CompuCell3D::ChemotaxisData::formulaPtr)(float, float, CompuCell3D::ChemotaxisData&)’ [-Wreorder]
   34 |         chemotaxisEnergyFormulaFcnPtr_t formulaPtr;
      |                                         ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:15:9: warning:   when initialized here [-Wreorder]
   15 |         ChemotaxisData(float _lambda = 0.0, float _saturationCoef = 0.0, std::string _typeName = "") :
      |         ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:34:41: warning: ‘CompuCell3D::ChemotaxisData::formulaPtr’ will be initialized after [-Wreorder]
   34 |         chemotaxisEnergyFormulaFcnPtr_t formulaPtr;
      |                                         ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:30:21: warning:   ‘std::string CompuCell3D::ChemotaxisData::formulaName’ [-Wreorder]
   30 |         std::string formulaName;
      |                     ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:15:9: warning:   when initialized here [-Wreorder]
   15 |         ChemotaxisData(float _lambda = 0.0, float _saturationCoef = 0.0, std::string _typeName = "") :
      |         ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:42:20: warning: ‘CompuCell3D::ChemotaxisData::automaton’ will be initialized after [-Wreorder]
   42 |         Automaton *automaton;
      |                    ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:37:14: warning:   ‘bool CompuCell3D::ChemotaxisData::allowChemotaxisBetweenCompartmentsGlobal’ [-Wreorder]
   37 |         bool allowChemotaxisBetweenCompartmentsGlobal;
      |              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:15:9: warning:   when initialized here [-Wreorder]
   15 |         ChemotaxisData(float _lambda = 0.0, float _saturationCoef = 0.0, std::string _typeName = "") :
      |         ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:37:14: warning: ‘CompuCell3D::ChemotaxisData::allowChemotaxisBetweenCompartmentsGlobal’ will be initialized after [-Wreorder]
   37 |         bool allowChemotaxisBetweenCompartmentsGlobal;
      |              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:29:15: warning:   ‘float CompuCell3D::ChemotaxisData::concCOM’ [-Wreorder]
   29 |         float concCOM;  // Storage for pre-calculated concentration at the COM of a cell
      |               ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:15:9: warning:   when initialized here [-Wreorder]
   15 |         ChemotaxisData(float _lambda = 0.0, float _saturationCoef = 0.0, std::string _typeName = "") :
      |         ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h: In member function ‘void CompuCell3D::ChemotaxisData::initializeChemotactTowardsVectorTypes(std::string)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:73:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   73 |             for (int idx = 0; idx < vecTypeNamesTmp.size(); ++idx) {
      |                               ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h: In member function ‘void CompuCell3D::ChemotaxisData::assignChemotactTowardsVectorTypes(std::vector<int>)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:82:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   82 |             for (int idx = 0; idx < _chemotactTowardsTypesVec.size(); ++idx) {
      |                               ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h: In member function ‘std::vector<int> CompuCell3D::ChemotaxisData::getChemotactTowardsVectorTypes()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:90:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<unsigned char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   90 |             for (int idx = 0; idx < chemotactTowardsTypesVec.size(); ++idx) {
      |                               ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h: In member function ‘void CompuCell3D::ChemotaxisData::outScr()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:118:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<unsigned char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  118 |             for (int i = 0; i < chemotactTowardsTypesVec.size(); ++i) {
      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h: In member function ‘CompuCell3D::ChemotaxisData* CompuCell3D::ChemotaxisFieldData::getChemotaxisData(int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:171:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ChemotaxisData>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  171 |             if (_index < 0 || _index > vecChemotaxisData.size() - 1)
      |                               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[150/395] /usr/bin/g++ -DMitosisShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/Mitosis/CMakeFiles/MitosisShared.dir/MitosisSimplePlugin.cpp.o -MF core/CompuCell3D/plugins/Mitosis/CMakeFiles/MitosisShared.dir/MitosisSimplePlugin.cpp.o.d -o core/CompuCell3D/plugins/Mitosis/CMakeFiles/MitosisShared.dir/MitosisSimplePlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp: In member function ‘CompuCell3D::OrientationVectorsMitosis CompuCell3D::MitosisSimplePlugin::getOrientationVectorsMitosis2D_xy(CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:146:12: warning: unused variable ‘zcm’ [-Wunused-variable]
  146 |     double zcm = cell->zCM / (float) cell->volume;
      |            ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:164:12: warning: unused variable ‘lMin’ [-Wunused-variable]
  164 |     double lMin = 0.5 * (inertiaTensor[0][0] + inertiaTensor[1][1]) - radical;
      |            ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp: In member function ‘bool CompuCell3D::MitosisSimplePlugin::doDirectionalMitosis2D_xy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:270:17: warning: variable ‘parentCellVolume’ set but not used [-Wunused-but-set-variable=]
  270 |             int parentCellVolume=0;
      |                 ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:219:16: warning: unused variable ‘zcm’ [-Wunused-variable]
  219 |         double zcm = cell->zCM / (float) cell->volume;
      |                ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp: In member function ‘CompuCell3D::OrientationVectorsMitosis CompuCell3D::MitosisSimplePlugin::getOrientationVectorsMitosis2D_xz(CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:299:12: warning: unused variable ‘ycm’ [-Wunused-variable]
  299 |     double ycm = cell->yCM / (float) cell->volume;
      |            ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:317:12: warning: unused variable ‘lMin’ [-Wunused-variable]
  317 |     double lMin = 0.5 * (inertiaTensor[0][0] + inertiaTensor[1][1]) - radical;
      |            ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp: In member function ‘bool CompuCell3D::MitosisSimplePlugin::doDirectionalMitosis2D_xz()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:423:17: warning: variable ‘parentCellVolume’ set but not used [-Wunused-but-set-variable=]
  423 |             int parentCellVolume=0;
      |                 ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:369:24: warning: unused variable ‘ycm’ [-Wunused-variable]
  369 |                 double ycm=cell->yCM/(float)cell->volume;
      |                        ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp: In member function ‘CompuCell3D::OrientationVectorsMitosis CompuCell3D::MitosisSimplePlugin::getOrientationVectorsMitosis2D_yz(CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:450:12: warning: unused variable ‘xcm’ [-Wunused-variable]
  450 |     double xcm = cell->xCM / (float) cell->volume;
      |            ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:469:12: warning: unused variable ‘lMin’ [-Wunused-variable]
  469 |     double lMin = 0.5 * (inertiaTensor[0][0] + inertiaTensor[1][1]) - radical;
      |            ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp: In member function ‘bool CompuCell3D::MitosisSimplePlugin::doDirectionalMitosis2D_yz()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:577:17: warning: variable ‘parentCellVolume’ set but not used [-Wunused-but-set-variable=]
  577 |             int parentCellVolume=0;
      |                 ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:522:16: warning: unused variable ‘xcm’ [-Wunused-variable]
  522 |         double xcm = cell->xCM / (float) cell->volume;
      |                ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp: In member function ‘bool CompuCell3D::MitosisSimplePlugin::doDirectionalMitosis3D()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:754:29: warning: variable ‘parentCellVolume’ set but not used [-Wunused-but-set-variable=]
  754 |                         int parentCellVolume=0;
      |                             ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp: In member function ‘bool CompuCell3D::MitosisSimplePlugin::doDirectionalMitosisOrientationVectorBased(double, double, double)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:830:13: warning: variable ‘parentCellVolume’ set but not used [-Wunused-but-set-variable=]
  830 |         int parentCellVolume=0;
      |             ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp: In member function ‘bool CompuCell3D::MitosisSimplePlugin::doDirectionalMitosis2D_xy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:294:1: warning: control reaches end of non-void function [-Wreturn-type]
  294 | }
      | ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp: In member function ‘bool CompuCell3D::MitosisSimplePlugin::doDirectionalMitosis2D_xz()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:447:1: warning: control reaches end of non-void function [-Wreturn-type]
  447 | }
      | ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp: In member function ‘bool CompuCell3D::MitosisSimplePlugin::doDirectionalMitosis2D_yz()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:601:1: warning: control reaches end of non-void function [-Wreturn-type]
  601 | }
      | ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp: In member function ‘bool CompuCell3D::MitosisSimplePlugin::doDirectionalMitosis3D()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:777:1: warning: control reaches end of non-void function [-Wreturn-type]
  777 | }
      | ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp: In member function ‘bool CompuCell3D::MitosisSimplePlugin::doDirectionalMitosisOrientationVectorBased(double, double, double)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:853:1: warning: control reaches end of non-void function [-Wreturn-type]
  853 | }
      | ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp: In member function ‘CompuCell3D::MitosisSimplePlugin::doDirectionalMitosis2D_xy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:256:15: warning: ‘a’ may be used uninitialized [-Wmaybe-uninitialized]
  256 |         if (a == 0.0 && b == 0.0) {//division along y axis
      |             ~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:228:24: note: ‘a’ was declared here
  228 |                 double a;
      |                        ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:256:27: warning: ‘b’ may be used uninitialized [-Wmaybe-uninitialized]
  256 |         if (a == 0.0 && b == 0.0) {//division along y axis
      |                         ~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:229:24: note: ‘b’ was declared here
  229 |                 double b;
      |                        ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp: In member function ‘CompuCell3D::MitosisSimplePlugin::doDirectionalMitosis2D_xz()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:409:15: warning: ‘a’ may be used uninitialized [-Wmaybe-uninitialized]
  409 |         if (a == 0.0 && b == 0.0) {//division along y axis
      |             ~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:382:24: note: ‘a’ was declared here
  382 |                 double a;
      |                        ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:409:27: warning: ‘b’ may be used uninitialized [-Wmaybe-uninitialized]
  409 |         if (a == 0.0 && b == 0.0) {//division along y axis
      |                         ~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:383:24: note: ‘b’ was declared here
  383 |                 double b;
      |                        ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp: In member function ‘CompuCell3D::MitosisSimplePlugin::doDirectionalMitosis2D_yz()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:563:15: warning: ‘a’ may be used uninitialized [-Wmaybe-uninitialized]
  563 |         if (a == 0.0 && b == 0.0) {//division along y axis
      |             ~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:536:24: note: ‘a’ was declared here
  536 |                 double a;
      |                        ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:563:27: warning: ‘b’ may be used uninitialized [-Wmaybe-uninitialized]
  563 |         if (a == 0.0 && b == 0.0) {//division along y axis
      |                         ~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.cpp:537:24: note: ‘b’ was declared here
  537 |                 double b;
      |                        ^
[151/395] /usr/bin/g++ -DCenterOfMassShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/CenterOfMass/CMakeFiles/CenterOfMassShared.dir/CenterOfMassPluginProxy.cpp.o -MF core/CompuCell3D/plugins/CenterOfMass/CMakeFiles/CenterOfMassShared.dir/CenterOfMassPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/CenterOfMass/CMakeFiles/CenterOfMassShared.dir/CenterOfMassPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CenterOfMass/CenterOfMassPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CenterOfMass/CenterOfMassPlugin.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CenterOfMass/CenterOfMassPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[152/395] /usr/bin/g++ -DCenterOfMassShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/CenterOfMass/CMakeFiles/CenterOfMassShared.dir/CenterOfMassPlugin.cpp.o -MF core/CompuCell3D/plugins/CenterOfMass/CMakeFiles/CenterOfMassShared.dir/CenterOfMassPlugin.cpp.o.d -o core/CompuCell3D/plugins/CenterOfMass/CMakeFiles/CenterOfMassShared.dir/CenterOfMassPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CenterOfMass/CenterOfMassPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CenterOfMass/CenterOfMassPlugin.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CenterOfMass/CenterOfMassPlugin.cpp: In member function ‘virtual void CompuCell3D::CenterOfMassPlugin::field3DChange(const CompuCell3D::Point3D&, CompuCell3D::CellG*, CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CenterOfMass/CenterOfMassPlugin.cpp:196:12: warning: variable ‘x’ set but not used [-Wunused-but-set-variable=]
  196 |     double x, y, z;
      |            ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CenterOfMass/CenterOfMassPlugin.cpp:196:15: warning: variable ‘y’ set but not used [-Wunused-but-set-variable=]
  196 |     double x, y, z;
      |               ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CenterOfMass/CenterOfMassPlugin.cpp:196:18: warning: variable ‘z’ set but not used [-Wunused-but-set-variable=]
  196 |     double x, y, z;
      |                  ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CenterOfMass/CenterOfMassPlugin.cpp:197:12: warning: variable ‘xo’ set but not used [-Wunused-but-set-variable=]
  197 |     double xo, yo, zo;
      |            ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CenterOfMass/CenterOfMassPlugin.cpp:197:16: warning: variable ‘yo’ set but not used [-Wunused-but-set-variable=]
  197 |     double xo, yo, zo;
      |                ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CenterOfMass/CenterOfMassPlugin.cpp:197:20: warning: variable ‘zo’ set but not used [-Wunused-but-set-variable=]
  197 |     double xo, yo, zo;
      |                    ^~
[153/395] /usr/bin/g++ -DMomentOfInertiaShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/MomentOfInertia/CMakeFiles/MomentOfInertiaShared.dir/MomentOfInertiaPlugin.cpp.o -MF core/CompuCell3D/plugins/MomentOfInertia/CMakeFiles/MomentOfInertiaShared.dir/MomentOfInertiaPlugin.cpp.o.d -o core/CompuCell3D/plugins/MomentOfInertia/CMakeFiles/MomentOfInertiaShared.dir/MomentOfInertiaPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/MomentOfInertia/MomentOfInertiaPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/MomentOfInertia/MomentOfInertiaPlugin.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[154/395] /usr/bin/g++ -DMomentOfInertiaShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/MomentOfInertia/CMakeFiles/MomentOfInertiaShared.dir/MomentOfInertiaPluginProxy.cpp.o -MF core/CompuCell3D/plugins/MomentOfInertia/CMakeFiles/MomentOfInertiaShared.dir/MomentOfInertiaPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/MomentOfInertia/CMakeFiles/MomentOfInertiaShared.dir/MomentOfInertiaPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/MomentOfInertia/MomentOfInertiaPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/MomentOfInertia/MomentOfInertiaPlugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/MomentOfInertia/MomentOfInertiaPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[155/395] /usr/bin/g++ -DChemotaxisShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/Chemotaxis/CMakeFiles/ChemotaxisShared.dir/ChemotaxisPlugin.cpp.o -MF core/CompuCell3D/plugins/Chemotaxis/CMakeFiles/ChemotaxisShared.dir/ChemotaxisPlugin.cpp.o.d -o core/CompuCell3D/plugins/Chemotaxis/CMakeFiles/ChemotaxisShared.dir/ChemotaxisPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp:12:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h: In constructor ‘CompuCell3D::ChemotaxisData::ChemotaxisData(float, float, std::string)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:39:21: warning: ‘CompuCell3D::ChemotaxisData::typeName’ will be initialized after [-Wreorder]
   39 |         std::string typeName;
      |                     ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:34:41: warning:   ‘float (CompuCell3D::ChemotaxisPlugin::* CompuCell3D::ChemotaxisData::formulaPtr)(float, float, CompuCell3D::ChemotaxisData&)’ [-Wreorder]
   34 |         chemotaxisEnergyFormulaFcnPtr_t formulaPtr;
      |                                         ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:15:9: warning:   when initialized here [-Wreorder]
   15 |         ChemotaxisData(float _lambda = 0.0, float _saturationCoef = 0.0, std::string _typeName = "") :
      |         ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:34:41: warning: ‘CompuCell3D::ChemotaxisData::formulaPtr’ will be initialized after [-Wreorder]
   34 |         chemotaxisEnergyFormulaFcnPtr_t formulaPtr;
      |                                         ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:30:21: warning:   ‘std::string CompuCell3D::ChemotaxisData::formulaName’ [-Wreorder]
   30 |         std::string formulaName;
      |                     ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:15:9: warning:   when initialized here [-Wreorder]
   15 |         ChemotaxisData(float _lambda = 0.0, float _saturationCoef = 0.0, std::string _typeName = "") :
      |         ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:42:20: warning: ‘CompuCell3D::ChemotaxisData::automaton’ will be initialized after [-Wreorder]
   42 |         Automaton *automaton;
      |                    ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:37:14: warning:   ‘bool CompuCell3D::ChemotaxisData::allowChemotaxisBetweenCompartmentsGlobal’ [-Wreorder]
   37 |         bool allowChemotaxisBetweenCompartmentsGlobal;
      |              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:15:9: warning:   when initialized here [-Wreorder]
   15 |         ChemotaxisData(float _lambda = 0.0, float _saturationCoef = 0.0, std::string _typeName = "") :
      |         ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:37:14: warning: ‘CompuCell3D::ChemotaxisData::allowChemotaxisBetweenCompartmentsGlobal’ will be initialized after [-Wreorder]
   37 |         bool allowChemotaxisBetweenCompartmentsGlobal;
      |              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:29:15: warning:   ‘float CompuCell3D::ChemotaxisData::concCOM’ [-Wreorder]
   29 |         float concCOM;  // Storage for pre-calculated concentration at the COM of a cell
      |               ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:15:9: warning:   when initialized here [-Wreorder]
   15 |         ChemotaxisData(float _lambda = 0.0, float _saturationCoef = 0.0, std::string _typeName = "") :
      |         ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h: In member function ‘void CompuCell3D::ChemotaxisData::initializeChemotactTowardsVectorTypes(std::string)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:73:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   73 |             for (int idx = 0; idx < vecTypeNamesTmp.size(); ++idx) {
      |                               ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h: In member function ‘void CompuCell3D::ChemotaxisData::assignChemotactTowardsVectorTypes(std::vector<int>)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:82:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   82 |             for (int idx = 0; idx < _chemotactTowardsTypesVec.size(); ++idx) {
      |                               ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h: In member function ‘std::vector<int> CompuCell3D::ChemotaxisData::getChemotactTowardsVectorTypes()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:90:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<unsigned char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   90 |             for (int idx = 0; idx < chemotactTowardsTypesVec.size(); ++idx) {
      |                               ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h: In member function ‘void CompuCell3D::ChemotaxisData::outScr()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:118:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<unsigned char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  118 |             for (int i = 0; i < chemotactTowardsTypesVec.size(); ++i) {
      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h: In member function ‘CompuCell3D::ChemotaxisData* CompuCell3D::ChemotaxisFieldData::getChemotaxisData(int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:171:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ChemotaxisData>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  171 |             if (_index < 0 || _index > vecChemotaxisData.size() - 1)
      |                               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp:13:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.h: In constructor ‘CompuCell3D::ChemotaxisPlugin::ChemotaxisPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.h:70:43: warning: ‘CompuCell3D::ChemotaxisPlugin::algorithmPtr’ will be initialized after [-Wreorder]
   70 |         changeEnergyEnergyFormulaFcnPtr_t algorithmPtr;
      |                                           ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.h:27:25: warning:   ‘CC3DXMLElement* CompuCell3D::ChemotaxisPlugin::xmlData’ [-Wreorder]
   27 |         CC3DXMLElement *xmlData;
      |                         ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp:18:1: warning:   when initialized here [-Wreorder]
   18 | ChemotaxisPlugin::ChemotaxisPlugin():algorithmPtr(&ChemotaxisPlugin::merksChemotaxis),xmlData(0),chemotaxisAlgorithm("merks"),automaton(0) {
      | ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.h:59:21: warning: ‘CompuCell3D::ChemotaxisPlugin::chemotaxisAlgorithm’ will be initialized after [-Wreorder]
   59 |         std::string chemotaxisAlgorithm;
      |                     ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.h:28:20: warning:   ‘CompuCell3D::Automaton* CompuCell3D::ChemotaxisPlugin::automaton’ [-Wreorder]
   28 |         Automaton *automaton;
      |                    ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp:18:1: warning:   when initialized here [-Wreorder]
   18 | ChemotaxisPlugin::ChemotaxisPlugin():algorithmPtr(&ChemotaxisPlugin::merksChemotaxis),xmlData(0),chemotaxisAlgorithm("merks"),automaton(0) {
      | ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp: In member function ‘virtual void CompuCell3D::ChemotaxisPlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp:84:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   84 |         for (int i  = 0 ; i < chemicalFieldXMlList.size() ; ++i){
      |                           ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp:96:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   96 |                 for (int j = 0 ; j < chemotactByTypeXMlList.size() ; ++j){
      |                                  ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp:207:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ChemotaxisFieldData>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  207 |         for(int i = 0 ; i < chemotaxisFieldDataVec.size() ; ++ i)
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp:208:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ChemotaxisData>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  208 |                 for(int j = 0 ; j < chemotaxisFieldDataVec[i].vecChemotaxisData.size() ; ++j){
      |                                 ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp:207:9: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  207 |         for(int i = 0 ; i < chemotaxisFieldDataVec.size() ; ++ i)
      |         ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp:213:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  213 |                 vecMapChemotaxisData.clear();
      |                 ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp:231:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ChemotaxisFieldData>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  231 |                 for(int i = 0 ; i < chemotaxisFieldDataVec.size() ; ++ i)
      |                                 ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp:232:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ChemotaxisData>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  232 |                         for(int j = 0 ; j < chemotaxisFieldDataVec[i].vecChemotaxisData.size() ; ++j){
      |                                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp:247:61: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  247 |                                         for(int idx=0 ; idx < vecTypeNamesTmp.size() ; ++idx){
      |                                                         ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp:231:17: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  231 |                 for(int i = 0 ; i < chemotaxisFieldDataVec.size() ; ++ i)
      |                 ^~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Boundary/BoundaryStrategy.h:16,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:5:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Logger/CC3DLogger.h:261:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  261 |     if (level > CompuCell3D::CC3DLogger::get()->getLevel()) { ; } \
      |     ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp:305:25: note: in expansion of macro ‘CC3D_Log’
  305 |                         CC3D_Log(LOG_DEBUG) << "chemicalFieldSourceVec.size()="<<chemotaxisFieldDataVec.size();
      |                         ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp: In member function ‘double CompuCell3D::ChemotaxisPlugin::regularChemotaxis(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp:480:50: warning: unused variable ‘chemotaxisDataPtr’ [-Wunused-variable]
  480 |                                 ChemotaxisData * chemotaxisDataPtr = &itr->second;
      |                                                  ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp: In member function ‘double CompuCell3D::ChemotaxisPlugin::reciprocatedChemotaxis(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp:553:58: warning: unused variable ‘chemotaxisDataPtr’ [-Wunused-variable]
  553 |                                         ChemotaxisData * chemotaxisDataPtr = & itr->second;
      |                                                          ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.cpp:591:58: warning: unused variable ‘chemotaxisDataPtr’ [-Wunused-variable]
  591 |                                         ChemotaxisData * chemotaxisDataPtr = & itr->second;
      |                                                          ^~~~~~~~~~~~~~~~~
[156/395] /usr/bin/g++ -DContactLocalFlexShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/ContactLocalFlex/CMakeFiles/ContactLocalFlexShared.dir/ContactLocalFlexPluginProxy.cpp.o -MF core/CompuCell3D/plugins/ContactLocalFlex/CMakeFiles/ContactLocalFlexShared.dir/ContactLocalFlexPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/ContactLocalFlex/CMakeFiles/ContactLocalFlexShared.dir/ContactLocalFlexPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalFlex/ContactLocalFlexPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalFlex/ContactLocalFlexPlugin.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalFlex/ContactLocalFlexPluginProxy.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[157/395] /usr/bin/g++ -DContactLocalFlexShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/ContactLocalFlex/CMakeFiles/ContactLocalFlexShared.dir/ContactLocalFlexPlugin.cpp.o -MF core/CompuCell3D/plugins/ContactLocalFlex/CMakeFiles/ContactLocalFlexShared.dir/ContactLocalFlexPlugin.cpp.o.d -o core/CompuCell3D/plugins/ContactLocalFlex/CMakeFiles/ContactLocalFlexShared.dir/ContactLocalFlexPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalFlex/ContactLocalFlexPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalFlex/ContactLocalFlexPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalFlex/ContactLocalFlexPlugin.cpp: In member function ‘void CompuCell3D::ContactLocalFlexPlugin::updateContactEnergyData(CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalFlex/ContactLocalFlexPlugin.cpp:228:18: warning: variable ‘size1’ set but not used [-Wunused-but-set-variable=]
  228 |     unsigned int size1 = 0, size2 = 0;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalFlex/ContactLocalFlexPlugin.cpp:228:29: warning: variable ‘size2’ set but not used [-Wunused-but-set-variable=]
  228 |     unsigned int size1 = 0, size2 = 0;
      |                             ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalFlex/ContactLocalFlexPlugin.cpp: In member function ‘virtual void CompuCell3D::ContactLocalFlexPlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalFlex/ContactLocalFlexPlugin.cpp:298:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  298 |     for (int i = 0; i < energyVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~
[158/395] /usr/bin/g++ -DContactLocalProductShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/ContactLocalProduct/CMakeFiles/ContactLocalProductShared.dir/ContactLocalProductPluginProxy.cpp.o -MF core/CompuCell3D/plugins/ContactLocalProduct/CMakeFiles/ContactLocalProductShared.dir/ContactLocalProductPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/ContactLocalProduct/CMakeFiles/ContactLocalProductShared.dir/ContactLocalProductPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[159/395] /usr/bin/g++ -DContactMultiCadShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/ContactMultiCad/CMakeFiles/ContactMultiCadShared.dir/ContactMultiCadPluginProxy.cpp.o -MF core/CompuCell3D/plugins/ContactMultiCad/CMakeFiles/ContactMultiCadShared.dir/ContactMultiCadPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/ContactMultiCad/CMakeFiles/ContactMultiCadShared.dir/ContactMultiCadPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadData.h: In member function ‘CompuCell3D::CadherinData* CompuCell3D::ContactMultiCadSpecificityCadherin::getSpecificity(std::string, std::string)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadData.h:74:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::CadherinData>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   74 |             for (int i = 0; i < specificityCadherinTuppleVec.size(); ++i) {
      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[160/395] /usr/bin/g++ -DContactLocalProductShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/ContactLocalProduct/CMakeFiles/ContactLocalProductShared.dir/ContactLocalProductPlugin.cpp.o -MF core/CompuCell3D/plugins/ContactLocalProduct/CMakeFiles/ContactLocalProductShared.dir/ContactLocalProductPlugin.cpp.o.d -o core/CompuCell3D/plugins/ContactLocalProduct/CMakeFiles/ContactLocalProductShared.dir/ContactLocalProductPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.cpp:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.h: In constructor ‘CompuCell3D::ContactLocalProductPlugin::ContactLocalProductPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.h:54:20: warning: ‘CompuCell3D::ContactLocalProductPlugin::automaton’ will be initialized after [-Wreorder]
   54 |         Automaton *automaton;
      |                    ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.h:41:25: warning:   ‘CC3DXMLElement* CompuCell3D::ContactLocalProductPlugin::xmlData’ [-Wreorder]
   41 |         CC3DXMLElement *xmlData;
      |                         ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.cpp:10:1: warning:   when initialized here [-Wreorder]
   10 | ContactLocalProductPlugin::ContactLocalProductPlugin() :
      | ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.cpp: In member function ‘virtual void CompuCell3D::ContactLocalProductPlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.cpp:98:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   98 |     for (int i = 0; i < energyVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.cpp:191:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  191 |         for (int i = 0; i < variableVec.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.cpp:197:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  197 |                 for (int idx = 0; idx < maxNumberOfWorkNodes; ++idx) {
      |                                   ~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.cpp:203:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  203 |                 for (int idx = 0; idx < maxNumberOfWorkNodes; ++idx) {
      |                                   ~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.cpp:226:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  226 |             for (int idx = 0; idx < maxNumberOfWorkNodes; ++idx) {
      |                               ~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.cpp: In member function ‘virtual void CompuCell3D::ContactLocalProductPlugin::handleEvent(CompuCell3D::CC3DEvent&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.cpp:253:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  253 |         for (int i = 0; i < variableNameVector.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.cpp:259:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  259 |                 for (int idx = 0; idx < maxNumberOfWorkNodes; ++idx) {
      |                                   ~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.cpp:265:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  265 |                 for (int idx = 0; idx < maxNumberOfWorkNodes; ++idx) {
      |                                   ~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.cpp:280:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  280 |         for (int idx = 0; idx < maxNumberOfWorkNodes; ++idx) {
      |                           ~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.cpp:252:14: warning: variable ‘variableInitializationOK’ set but not used [-Wunused-but-set-variable=]
  252 |         bool variableInitializationOK = false;
      |              ^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.cpp: In member function ‘virtual double CompuCell3D::ContactLocalProductPlugin::changeEnergy(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.cpp:294:18: warning: unused variable ‘token’ [-Wunused-variable]
  294 |     unsigned int token = 0;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.cpp:295:12: warning: unused variable ‘distance’ [-Wunused-variable]
  295 |     double distance = 0;
      |            ^~~~~~~~
[161/395] /usr/bin/g++ -DConnectivityLocalFlexShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/ConnectivityLocalFlex/CMakeFiles/ConnectivityLocalFlexShared.dir/ConnectivityLocalFlexPlugin.cpp.o -MF core/CompuCell3D/plugins/ConnectivityLocalFlex/CMakeFiles/ConnectivityLocalFlexShared.dir/ConnectivityLocalFlexPlugin.cpp.o.d -o core/CompuCell3D/plugins/ConnectivityLocalFlex/CMakeFiles/ConnectivityLocalFlexShared.dir/ConnectivityLocalFlexPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityLocalFlex/ConnectivityLocalFlexPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityLocalFlex/ConnectivityLocalFlexPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityLocalFlex/ConnectivityLocalFlexPlugin.cpp: In member function ‘virtual double CompuCell3D::ConnectivityLocalFlexPlugin::changeEnergy(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityLocalFlex/ConnectivityLocalFlexPlugin.cpp:97:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   97 |     for (int i = 0; i <= firstMaxIndex; ++i) {
      |                     ~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityLocalFlex/ConnectivityLocalFlexPlugin.cpp:117:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  117 |     for (int i = 0; i < numberOfNeighbors; ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityLocalFlex/ConnectivityLocalFlexPlugin.cpp: In member function ‘void CompuCell3D::ConnectivityLocalFlexPlugin::orderNeighborsClockwise(CompuCell3D::Point3D&, const std::vector<CompuCell3D::Point3D>&, std::vector<int>&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityLocalFlex/ConnectivityLocalFlexPlugin.cpp:166:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  166 |         for (int i = 0; i < numberOfNeighbors; ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~
[162/395] /usr/bin/g++ -DConnectivityLocalFlexShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/ConnectivityLocalFlex/CMakeFiles/ConnectivityLocalFlexShared.dir/ConnectivityLocalFlexPluginProxy.cpp.o -MF core/CompuCell3D/plugins/ConnectivityLocalFlex/CMakeFiles/ConnectivityLocalFlexShared.dir/ConnectivityLocalFlexPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/ConnectivityLocalFlex/CMakeFiles/ConnectivityLocalFlexShared.dir/ConnectivityLocalFlexPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityLocalFlex/ConnectivityLocalFlexPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityLocalFlex/ConnectivityLocalFlexPlugin.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityLocalFlex/ConnectivityLocalFlexPluginProxy.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[163/395] /usr/bin/g++ -DContactMultiCadShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/ContactMultiCad/CMakeFiles/ContactMultiCadShared.dir/ContactMultiCadPlugin.cpp.o -MF core/CompuCell3D/plugins/ContactMultiCad/CMakeFiles/ContactMultiCadShared.dir/ContactMultiCadPlugin.cpp.o.d -o core/CompuCell3D/plugins/ContactMultiCad/CMakeFiles/ContactMultiCadShared.dir/ContactMultiCadPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.cpp:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadData.h: In member function ‘CompuCell3D::CadherinData* CompuCell3D::ContactMultiCadSpecificityCadherin::getSpecificity(std::string, std::string)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadData.h:74:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::CadherinData>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   74 |             for (int i = 0; i < specificityCadherinTuppleVec.size(); ++i) {
      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.h: In constructor ‘CompuCell3D::ContactMultiCadPlugin::ContactMultiCadPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.h:62:28: warning: ‘CompuCell3D::ContactMultiCadPlugin::contactEnergyPtr’ will be initialized after [-Wreorder]
   62 |         contactEnergyPtr_t contactEnergyPtr;
      |                            ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.h:60:14: warning:   ‘bool CompuCell3D::ContactMultiCadPlugin::weightDistance’ [-Wreorder]
   60 |         bool weightDistance;
      |              ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.cpp:10:1: warning:   when initialized here [-Wreorder]
   10 | ContactMultiCadPlugin::ContactMultiCadPlugin() :
      | ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.cpp: In member function ‘virtual double CompuCell3D::ContactMultiCadPlugin::changeEnergy(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.cpp:40:18: warning: unused variable ‘token’ [-Wunused-variable]
   40 |     unsigned int token = 0;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.cpp:41:12: warning: variable ‘distance’ set but not used [-Wunused-but-set-variable=]
   41 |     double distance = 0;
      |            ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.cpp: In member function ‘double CompuCell3D::ContactMultiCadPlugin::contactEnergyLinear(const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.cpp:145:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  145 |         for (int i = 0; i < numberOfCadherins; ++i)
      |                         ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.cpp:146:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  146 |             for (int j = 0; j < numberOfCadherins; ++j) {
      |                             ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.cpp: In member function ‘virtual void CompuCell3D::ContactMultiCadPlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.cpp:191:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  191 |     for (int i = 0; i < energyVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.cpp:262:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  262 |         for (int i = 0; i < specCadVec.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.cpp:268:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  268 |             for (int j = 0; j < specVec.size(); ++j) {
      |                             ~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.cpp:281:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ContactMultiCadSpecificityCadherin>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  281 |         for (int i = 0; i < vecMultCadSpecCad.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.cpp:308:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ContactMultiCadSpecificityCadherin>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  308 |         for (int i = 0; i < vecMultCadSpecCad.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.cpp:326:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  326 |         for (int i = 0; i < numberOfCadherins; ++i)
      |                         ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.cpp:327:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  327 |             for (int j = 0; j < numberOfCadherins; ++j) {
      |                             ~~^~~~~~~~~~~~~~~~~~~
[164/395] /usr/bin/g++ -DConnectivityGlobalShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/ConnectivityGlobal/CMakeFiles/ConnectivityGlobalShared.dir/ConnectivityGlobalPluginProxy.cpp.o -MF core/CompuCell3D/plugins/ConnectivityGlobal/CMakeFiles/ConnectivityGlobalShared.dir/ConnectivityGlobalPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/ConnectivityGlobal/CMakeFiles/ConnectivityGlobalShared.dir/ConnectivityGlobalPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityGlobal/ConnectivityGlobalPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityGlobal/ConnectivityGlobalPlugin.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityGlobal/ConnectivityGlobalPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[165/395] /usr/bin/g++ -DLengthConstraintShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/LengthConstraint/CMakeFiles/LengthConstraintShared.dir/LengthConstraintPluginProxy.cpp.o -MF core/CompuCell3D/plugins/LengthConstraint/CMakeFiles/LengthConstraintShared.dir/LengthConstraintPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/LengthConstraint/CMakeFiles/LengthConstraintShared.dir/LengthConstraintPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h: In constructor ‘CompuCell3D::LengthEnergyParam::LengthEnergyParam()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h:28:15: warning: ‘CompuCell3D::LengthEnergyParam::lambdaLength’ will be initialized after [-Wreorder]
   28 |         float lambdaLength;
      |               ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h:27:16: warning:   ‘double CompuCell3D::LengthEnergyParam::minorTargetLength’ [-Wreorder]
   27 |         double minorTargetLength;
      |                ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h:21:9: warning:   when initialized here [-Wreorder]
   21 |         LengthEnergyParam() : targetLength(0), lambdaLength(0.0), minorTargetLength(0.0) {}
      |         ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h: In constructor ‘CompuCell3D::LengthEnergyParam::LengthEnergyParam(std::string, double, double)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h:29:21: warning: ‘CompuCell3D::LengthEnergyParam::cellTypeName’ will be initialized after [-Wreorder]
   29 |         std::string cellTypeName;
      |                     ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h:26:16: warning:   ‘double CompuCell3D::LengthEnergyParam::targetLength’ [-Wreorder]
   26 |         double targetLength;
      |                ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h:23:9: warning:   when initialized here [-Wreorder]
   23 |         LengthEnergyParam(std::string _cellTypeName, double _targetLength, double _lambdaLength) :
      |         ^~~~~~~~~~~~~~~~~
[166/395] /usr/bin/g++ -DConnectivityGlobalShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/ConnectivityGlobal/CMakeFiles/ConnectivityGlobalShared.dir/ConnectivityGlobalPlugin.cpp.o -MF core/CompuCell3D/plugins/ConnectivityGlobal/CMakeFiles/ConnectivityGlobalShared.dir/ConnectivityGlobalPlugin.cpp.o.d -o core/CompuCell3D/plugins/ConnectivityGlobal/CMakeFiles/ConnectivityGlobalShared.dir/ConnectivityGlobalPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityGlobal/ConnectivityGlobalPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityGlobal/ConnectivityGlobalPlugin.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityGlobal/ConnectivityGlobalPlugin.cpp: In member function ‘virtual void CompuCell3D::ConnectivityGlobalPlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityGlobal/ConnectivityGlobalPlugin.cpp:72:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   72 |         for (int i = 0; i < penaltyVecXML.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityGlobal/ConnectivityGlobalPlugin.cpp:76:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   76 |         for (int i = 0; i < connectivityOnVecXML.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityGlobal/ConnectivityGlobalPlugin.cpp: In member function ‘bool CompuCell3D::ConnectivityGlobalPlugin::checkIfCellIsFragmented(const CompuCell3D::CellG*, CompuCell3D::Point3D)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityGlobal/ConnectivityGlobalPlugin.cpp:143:31: warning: unused variable ‘fpbRef_2’ [-Wunused-variable]
  143 |         std::deque<Point3D> * fpbRef_2 = &filoPointBuffer_2;
      |                               ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityGlobal/ConnectivityGlobalPlugin.cpp: In member function ‘double CompuCell3D::ConnectivityGlobalPlugin::changeEnergyFast(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityGlobal/ConnectivityGlobalPlugin.cpp:346:14: warning: variable ‘newCellByTypeCalculations’ set but not used [-Wunused-but-set-variable=]
  346 |         bool newCellByTypeCalculations = false;
      |              ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityGlobal/ConnectivityGlobalPlugin.cpp:348:14: warning: variable ‘oldCellByTypeCalculations’ set but not used [-Wunused-but-set-variable=]
  348 |         bool oldCellByTypeCalculations = false;
      |              ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityGlobal/ConnectivityGlobalPlugin.cpp: In member function ‘double CompuCell3D::ConnectivityGlobalPlugin::changeEnergyLegacy(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityGlobal/ConnectivityGlobalPlugin.cpp:499:31: warning: unused variable ‘fpbRef_2’ [-Wunused-variable]
  499 |         std::deque<Point3D> * fpbRef_2 = &filoPointBuffer_2;
      |                               ^~~~~~~~
[167/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/ElasticityTracker/libCC3DElasticityTracker.so.4.9.0  core/CompuCell3D/plugins/ElasticityTracker/libCC3DElasticityTracker.so.4.9 core/CompuCell3D/plugins/ElasticityTracker/libCC3DElasticityTracker.so && :
[168/395] /usr/bin/g++ -DLengthConstraintShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/LengthConstraint/CMakeFiles/LengthConstraintShared.dir/LengthConstraintPlugin.cpp.o -MF core/CompuCell3D/plugins/LengthConstraint/CMakeFiles/LengthConstraintShared.dir/LengthConstraintPlugin.cpp.o.d -o core/CompuCell3D/plugins/LengthConstraint/CMakeFiles/LengthConstraintShared.dir/LengthConstraintPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.cpp:9:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h: In constructor ‘CompuCell3D::LengthEnergyParam::LengthEnergyParam()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h:28:15: warning: ‘CompuCell3D::LengthEnergyParam::lambdaLength’ will be initialized after [-Wreorder]
   28 |         float lambdaLength;
      |               ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h:27:16: warning:   ‘double CompuCell3D::LengthEnergyParam::minorTargetLength’ [-Wreorder]
   27 |         double minorTargetLength;
      |                ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h:21:9: warning:   when initialized here [-Wreorder]
   21 |         LengthEnergyParam() : targetLength(0), lambdaLength(0.0), minorTargetLength(0.0) {}
      |         ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h: In constructor ‘CompuCell3D::LengthEnergyParam::LengthEnergyParam(std::string, double, double)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h:29:21: warning: ‘CompuCell3D::LengthEnergyParam::cellTypeName’ will be initialized after [-Wreorder]
   29 |         std::string cellTypeName;
      |                     ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h:26:16: warning:   ‘double CompuCell3D::LengthEnergyParam::targetLength’ [-Wreorder]
   26 |         double targetLength;
      |                ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h:23:9: warning:   when initialized here [-Wreorder]
   23 |         LengthEnergyParam(std::string _cellTypeName, double _targetLength, double _lambdaLength) :
      |         ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.cpp: In member function ‘virtual void CompuCell3D::LengthConstraintPlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.cpp:94:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   94 |     for (int i = 0; i < lengthEnergyParamVecXML.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.cpp: In member function ‘double CompuCell3D::LengthConstraintPlugin::changeEnergy_3D(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.cpp:442:12: warning: unused variable ‘delta_en_new’ [-Wunused-variable]
  442 |     double delta_en_new = 0.0;
      |            ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.cpp:443:12: warning: unused variable ‘delta_en’ [-Wunused-variable]
  443 |     double delta_en = 0.0;
      |            ^~~~~~~~
[169/395] /usr/bin/g++ -DCellOrientationShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/CellOrientation/CMakeFiles/CellOrientationShared.dir/CellOrientationPlugin.cpp.o -MF core/CompuCell3D/plugins/CellOrientation/CMakeFiles/CellOrientationShared.dir/CellOrientationPlugin.cpp.o.d -o core/CompuCell3D/plugins/CellOrientation/CMakeFiles/CellOrientationShared.dir/CellOrientationPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellOrientation/CellOrientationPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellOrientation/CellOrientationPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellOrientation/CellOrientationPlugin.cpp:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellOrientation/CellOrientationPlugin.h: In constructor ‘CompuCell3D::CellOrientationPlugin::CellOrientationPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellOrientation/CellOrientationPlugin.h:52:20: warning: ‘CompuCell3D::CellOrientationPlugin::simulator’ will be initialized after [-Wreorder]
   52 |         Simulator *simulator;
      |                    ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellOrientation/CellOrientationPlugin.h:43:27: warning:   ‘CompuCell3D::Field3D<CompuCell3D::CellG*>* CompuCell3D::CellOrientationPlugin::cellFieldG’ [-Wreorder]
   43 |         Field3D<CellG *> *cellFieldG;
      |                           ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellOrientation/CellOrientationPlugin.cpp:13:1: warning:   when initialized here [-Wreorder]
   13 | CellOrientationPlugin::CellOrientationPlugin() : potts(0),
      | ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellOrientation/CellOrientationPlugin.h:54:57: warning: ‘CompuCell3D::CellOrientationPlugin::polarizationVectorAccessorPtr’ will be initialized after [-Wreorder]
   54 |         ExtraMembersGroupAccessor <PolarizationVector> *polarizationVectorAccessorPtr;
      |                                                         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellOrientation/CellOrientationPlugin.h:51:16: warning:   ‘double CompuCell3D::CellOrientationPlugin::lambdaCellOrientation’ [-Wreorder]
   51 |         double lambdaCellOrientation;
      |                ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellOrientation/CellOrientationPlugin.cpp:13:1: warning:   when initialized here [-Wreorder]
   13 | CellOrientationPlugin::CellOrientationPlugin() : potts(0),
      | ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellOrientation/CellOrientationPlugin.h:74:47: warning: ‘CompuCell3D::CellOrientationPlugin::changeEnergyFcnPtr’ will be initialized after [-Wreorder]
   74 |         CellOrientationPlugin::changeEnergy_t changeEnergyFcnPtr;
      |                                               ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellOrientation/CellOrientationPlugin.h:55:27: warning:   ‘CompuCell3D::BoundaryStrategy* CompuCell3D::CellOrientationPlugin::boundaryStrategy’ [-Wreorder]
   55 |         BoundaryStrategy *boundaryStrategy;
      |                           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellOrientation/CellOrientationPlugin.cpp:13:1: warning:   when initialized here [-Wreorder]
   13 | CellOrientationPlugin::CellOrientationPlugin() : potts(0),
      | ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellOrientation/CellOrientationPlugin.cpp: In member function ‘virtual void CompuCell3D::CellOrientationPlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellOrientation/CellOrientationPlugin.cpp:97:10: warning: variable ‘comBasedAlgorithm’ set but not used [-Wunused-but-set-variable=]
   97 |     bool comBasedAlgorithm = false;
      |          ^~~~~~~~~~~~~~~~~
[170/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/PlasticityTracker/libCC3DPlasticityTracker.so.4.9.0  core/CompuCell3D/plugins/PlasticityTracker/libCC3DPlasticityTracker.so.4.9 core/CompuCell3D/plugins/PlasticityTracker/libCC3DPlasticityTracker.so && :
[171/395] /usr/bin/g++ -DCellOrientationShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/CellOrientation/CMakeFiles/CellOrientationShared.dir/CellOrientationPluginProxy.cpp.o -MF core/CompuCell3D/plugins/CellOrientation/CMakeFiles/CellOrientationShared.dir/CellOrientationPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/CellOrientation/CMakeFiles/CellOrientationShared.dir/CellOrientationPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellOrientation/CellOrientationPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellOrientation/CellOrientationPlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellOrientation/CellOrientationPluginProxy.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[172/395] /usr/bin/g++ -DElasticityShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/Elasticity/CMakeFiles/ElasticityShared.dir/ElasticityPlugin.cpp.o -MF core/CompuCell3D/plugins/Elasticity/CMakeFiles/ElasticityShared.dir/ElasticityPlugin.cpp.o.d -o core/CompuCell3D/plugins/Elasticity/CMakeFiles/ElasticityShared.dir/ElasticityPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPlugin.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPlugin.cpp:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPlugin.h: In constructor ‘CompuCell3D::ElasticityPlugin::ElasticityPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPlugin.h:44:16: warning: ‘CompuCell3D::ElasticityPlugin::lambdaElasticity’ will be initialized after [-Wreorder]
   44 |         double lambdaElasticity;
      |                ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPlugin.h:43:15: warning:   ‘float CompuCell3D::ElasticityPlugin::maxLengthElasticity’ [-Wreorder]
   43 |         float maxLengthElasticity;
      |               ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPlugin.cpp:17:1: warning:   when initialized here [-Wreorder]
   17 | ElasticityPlugin::ElasticityPlugin() :
      | ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPlugin.h:55:27: warning: ‘CompuCell3D::ElasticityPlugin::boundaryStrategy’ will be initialized after [-Wreorder]
   55 |         BoundaryStrategy *boundaryStrategy;
      |                           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPlugin.h:45:20: warning:   ‘CompuCell3D::Simulator* CompuCell3D::ElasticityPlugin::simulator’ [-Wreorder]
   45 |         Simulator *simulator;
      |                    ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPlugin.cpp:17:1: warning:   when initialized here [-Wreorder]
   17 | ElasticityPlugin::ElasticityPlugin() :
      | ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPlugin.cpp: In member function ‘virtual void CompuCell3D::ElasticityPlugin::handleEvent(CompuCell3D::CC3DEvent&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPlugin.cpp:72:11: warning: variable ‘shiftVec’ set but not used [-Wunused-but-set-variable=]
   72 |     Dim3D shiftVec = ev.shiftVec;
      |           ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPlugin.cpp: In member function ‘virtual void CompuCell3D::ElasticityPlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPlugin.cpp:83:14: warning: unused variable ‘potts’ [-Wunused-variable]
   83 |     Potts3D *potts = simulator->getPotts();
      |              ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPlugin.cpp: In member function ‘virtual double CompuCell3D::ElasticityPlugin::changeEnergy(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPlugin.cpp:241:11: warning: variable ‘oldVol’ set but not used [-Wunused-but-set-variable=]
  241 |     float oldVol;
      |           ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPlugin.cpp:242:11: warning: variable ‘newVol’ set but not used [-Wunused-but-set-variable=]
  242 |     float newVol;
      |           ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPlugin.cpp:297:48: warning: ‘deltaL’ may be used uninitialized [-Wmaybe-uninitialized]
  297 |             energy += (this->*diffEnergyFcnPtr)(deltaL, lBefore, &(*sitr), newCell);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPlugin.cpp:239:11: note: ‘deltaL’ was declared here
  239 |     float deltaL;
      |           ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPlugin.cpp:297:48: warning: ‘lBefore’ may be used uninitialized [-Wmaybe-uninitialized]
  297 |             energy += (this->*diffEnergyFcnPtr)(deltaL, lBefore, &(*sitr), newCell);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPlugin.cpp:240:11: note: ‘lBefore’ was declared here
  240 |     float lBefore;
      |           ^~~~~~~
[173/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/PolarizationVector/libCC3DPolarizationVector.so.4.9.0  core/CompuCell3D/plugins/PolarizationVector/libCC3DPolarizationVector.so.4.9 core/CompuCell3D/plugins/PolarizationVector/libCC3DPolarizationVector.so && :
[174/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/BoundaryPixelTracker/libCC3DBoundaryPixelTracker.so.4.9.0  core/CompuCell3D/plugins/BoundaryPixelTracker/libCC3DBoundaryPixelTracker.so.4.9 core/CompuCell3D/plugins/BoundaryPixelTracker/libCC3DBoundaryPixelTracker.so && :
[175/395] /usr/bin/g++ -DElasticityShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/Elasticity/CMakeFiles/ElasticityShared.dir/ElasticityPluginProxy.cpp.o -MF core/CompuCell3D/plugins/Elasticity/CMakeFiles/ElasticityShared.dir/ElasticityPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/Elasticity/CMakeFiles/ElasticityShared.dir/ElasticityPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPlugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Elasticity/ElasticityPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[176/395] /usr/bin/g++ -DPlasticityShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/Plasticity/CMakeFiles/PlasticityShared.dir/PlasticityPlugin.cpp.o -MF core/CompuCell3D/plugins/Plasticity/CMakeFiles/PlasticityShared.dir/PlasticityPlugin.cpp.o.d -o core/CompuCell3D/plugins/Plasticity/CMakeFiles/PlasticityShared.dir/PlasticityPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Plasticity/PlasticityPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Plasticity/PlasticityPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Plasticity/PlasticityPlugin.cpp:11:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Plasticity/PlasticityPlugin.h: In constructor ‘CompuCell3D::PlasticityPlugin::PlasticityPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Plasticity/PlasticityPlugin.h:42:16: warning: ‘CompuCell3D::PlasticityPlugin::lambdaPlasticity’ will be initialized after [-Wreorder]
   42 |         double lambdaPlasticity;
      |                ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Plasticity/PlasticityPlugin.h:41:15: warning:   ‘float CompuCell3D::PlasticityPlugin::maxLengthPlasticity’ [-Wreorder]
   41 |         float maxLengthPlasticity;
      |               ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Plasticity/PlasticityPlugin.cpp:14:1: warning:   when initialized here [-Wreorder]
   14 | PlasticityPlugin::PlasticityPlugin() :
      | ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Plasticity/PlasticityPlugin.cpp: In member function ‘virtual double CompuCell3D::PlasticityPlugin::changeEnergy(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Plasticity/PlasticityPlugin.cpp:176:11: warning: variable ‘oldVol’ set but not used [-Wunused-but-set-variable=]
  176 |     float oldVol;
      |           ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Plasticity/PlasticityPlugin.cpp:177:11: warning: variable ‘newVol’ set but not used [-Wunused-but-set-variable=]
  177 |     float newVol;
      |           ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Plasticity/PlasticityPlugin.cpp:234:48: warning: ‘deltaL’ may be used uninitialized [-Wmaybe-uninitialized]
  234 |             energy += (this->*diffEnergyFcnPtr)(deltaL, lBefore, &(*sitr), newCell);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Plasticity/PlasticityPlugin.cpp:174:11: note: ‘deltaL’ was declared here
  174 |     float deltaL;
      |           ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Plasticity/PlasticityPlugin.cpp:234:48: warning: ‘lBefore’ may be used uninitialized [-Wmaybe-uninitialized]
  234 |             energy += (this->*diffEnergyFcnPtr)(deltaL, lBefore, &(*sitr), newCell);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Plasticity/PlasticityPlugin.cpp:175:11: note: ‘lBefore’ was declared here
  175 |     float lBefore;
      |           ^~~~~~~
[177/395] /usr/bin/g++ -DPlasticityShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/Plasticity/CMakeFiles/PlasticityShared.dir/PlasticityPluginProxy.cpp.o -MF core/CompuCell3D/plugins/Plasticity/CMakeFiles/PlasticityShared.dir/PlasticityPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/Plasticity/CMakeFiles/PlasticityShared.dir/PlasticityPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Plasticity/PlasticityPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Plasticity/PlasticityPlugin.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Plasticity/PlasticityPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[178/395] /usr/bin/g++ -DSecretionShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/Secretion/CMakeFiles/SecretionShared.dir/SecretionPluginProxy.cpp.o -MF core/CompuCell3D/plugins/Secretion/CMakeFiles/SecretionShared.dir/SecretionPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/Secretion/CMakeFiles/SecretionShared.dir/SecretionPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[179/395] /usr/bin/g++ -DSecretionShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/Secretion/CMakeFiles/SecretionShared.dir/FieldSecretor.cpp.o -MF core/CompuCell3D/plugins/Secretion/CMakeFiles/SecretionShared.dir/FieldSecretor.cpp.o.d -o core/CompuCell3D/plugins/Secretion/CMakeFiles/SecretionShared.dir/FieldSecretor.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/FieldSecretor.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/FieldSecretor.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/FieldSecretor.cpp:11:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/FieldSecretor.h: In constructor ‘CompuCell3D::FieldSecretorResult::FieldSecretorResult(float, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/FieldSecretor.h:38:15: warning: ‘CompuCell3D::FieldSecretorResult::tot_amount’ will be initialized after [-Wreorder]
   38 |         float tot_amount;
      |               ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/FieldSecretor.h:37:14: warning:   ‘bool CompuCell3D::FieldSecretorResult::success_flag’ [-Wreorder]
   37 |         bool success_flag;
      |              ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/FieldSecretor.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         FieldSecretorResult(float tot_amount = 0.0, bool success_flag = true) :
      |         ^~~~~~~~~~~~~~~~~~~
[180/395] /usr/bin/g++ -DSecretionShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/Secretion/CMakeFiles/SecretionShared.dir/SecretionPlugin.cpp.o -MF core/CompuCell3D/plugins/Secretion/CMakeFiles/SecretionShared.dir/SecretionPlugin.cpp.o.d -o core/CompuCell3D/plugins/Secretion/CMakeFiles/SecretionShared.dir/SecretionPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.cpp:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/FieldSecretor.h: In constructor ‘CompuCell3D::FieldSecretorResult::FieldSecretorResult(float, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/FieldSecretor.h:38:15: warning: ‘CompuCell3D::FieldSecretorResult::tot_amount’ will be initialized after [-Wreorder]
   38 |         float tot_amount;
      |               ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/FieldSecretor.h:37:14: warning:   ‘bool CompuCell3D::FieldSecretorResult::success_flag’ [-Wreorder]
   37 |         bool success_flag;
      |              ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/FieldSecretor.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         FieldSecretorResult(float tot_amount = 0.0, bool success_flag = true) :
      |         ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.cpp:13:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.h: In constructor ‘CompuCell3D::SecretionPlugin::SecretionPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.h:42:20: warning: ‘CompuCell3D::SecretionPlugin::sim’ will be initialized after [-Wreorder]
   42 |         Simulator *sim;
      |                    ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.h:41:18: warning:   ‘CompuCell3D::Potts3D* CompuCell3D::SecretionPlugin::potts’ [-Wreorder]
   41 |         Potts3D *potts;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.cpp:16:1: warning:   when initialized here [-Wreorder]
   16 | SecretionPlugin::SecretionPlugin() :
      | ^~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.h:55:22: warning: ‘CompuCell3D::SecretionPlugin::maxNeighborIndex’ will be initialized after [-Wreorder]
   55 |         unsigned int maxNeighborIndex;
      |                      ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.h:51:29: warning:   ‘CompuCell3D::PixelTrackerPlugin* CompuCell3D::SecretionPlugin::pixelTrackerPlugin’ [-Wreorder]
   51 |         PixelTrackerPlugin *pixelTrackerPlugin;
      |                             ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.cpp:16:1: warning:   when initialized here [-Wreorder]
   16 | SecretionPlugin::SecretionPlugin() :
      | ^~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.h:51:29: warning: ‘CompuCell3D::SecretionPlugin::pixelTrackerPlugin’ will be initialized after [-Wreorder]
   51 |         PixelTrackerPlugin *pixelTrackerPlugin;
      |                             ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.h:50:37: warning:   ‘CompuCell3D::BoundaryPixelTrackerPlugin* CompuCell3D::SecretionPlugin::boundaryPixelTrackerPlugin’ [-Wreorder]
   50 |         BoundaryPixelTrackerPlugin *boundaryPixelTrackerPlugin;
      |                                     ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.cpp:16:1: warning:   when initialized here [-Wreorder]
   16 | SecretionPlugin::SecretionPlugin() :
      | ^~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.cpp: In member function ‘virtual void CompuCell3D::SecretionPlugin::extraInit(CompuCell3D::Simulator*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.cpp:81:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::SecretionDataP>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   81 |     for (int i = 0; i < secretionDataPVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.cpp: In member function ‘virtual void CompuCell3D::SecretionPlugin::step()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.cpp:160:70: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  160 |         if (!((currentAttempt - reminder) % ratio) && currentAttempt > reminder) {
      |                                                       ~~~~~~~~~~~~~~~^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.cpp:147:18: warning: variable ‘currentStep’ set but not used [-Wunused-but-set-variable=]
  147 |     unsigned int currentStep;
      |                  ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.cpp: In member function ‘void CompuCell3D::SecretionPlugin::secreteOnContactSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.cpp:473:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  473 |                         for (int i = 0; i <= maxNeighborIndex/*offsetVec.size()*/ ; ++i) {
      |                                         ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.cpp:502:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  502 |                             for (int i = 0; i <= maxNeighborIndex/*offsetVec.size() */; ++i) {
      |                                             ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.cpp: In member function ‘void CompuCell3D::SecretionPlugin::secreteConstantConcentrationSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.cpp:588:15: warning: unused variable ‘currentConcentration’ [-Wunused-variable]
  588 |         float currentConcentration;
      |               ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.cpp: In member function ‘CompuCell3D::SecretionPlugin::secreteOnContactSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.cpp:427:9: warning: ‘contactCellMapMediumPtr’ may be used uninitialized [-Wmaybe-uninitialized]
  427 | #pragma omp parallel
      |         ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.cpp:384:37: note: ‘contactCellMapMediumPtr’ was declared here
  384 |     std::map<unsigned char, float> *contactCellMapMediumPtr;
      |                                     ^~~~~~~~~~~~~~~~~~~~~~~
[181/395] /usr/bin/g++ -DSecretionShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/Secretion/CMakeFiles/SecretionShared.dir/SecretionDataP.cpp.o -MF core/CompuCell3D/plugins/Secretion/CMakeFiles/SecretionShared.dir/SecretionDataP.cpp.o.d -o core/CompuCell3D/plugins/Secretion/CMakeFiles/SecretionShared.dir/SecretionDataP.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionDataP.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionDataP.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionDataP.cpp: In member function ‘virtual void CompuCell3D::SecretionDataP::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionDataP.cpp:76:23: warning: unused variable ‘typeId’ [-Wunused-variable]
   76 |         unsigned char typeId;
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionDataP.cpp:77:23: warning: unused variable ‘contactTypeId’ [-Wunused-variable]
   77 |         unsigned char contactTypeId;
      |                       ^~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionDataP.cpp:115:23: warning: unused variable ‘typeId’ [-Wunused-variable]
  115 |         unsigned char typeId;
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionDataP.cpp:134:23: warning: unused variable ‘typeId’ [-Wunused-variable]
  134 |         unsigned char typeId;
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionDataP.cpp:153:23: warning: unused variable ‘typeId’ [-Wunused-variable]
  153 |         unsigned char typeId;
      |                       ^~~~~~
[182/395] /usr/bin/g++ -DFieldManagerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/steppables/FieldManager/CMakeFiles/FieldManagerShared.dir/FieldManagerProxy.cpp.o -MF core/CompuCell3D/steppables/FieldManager/CMakeFiles/FieldManagerShared.dir/FieldManagerProxy.cpp.o.d -o core/CompuCell3D/steppables/FieldManager/CMakeFiles/FieldManagerShared.dir/FieldManagerProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FieldManager/FieldManagerProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FieldManager/FieldManager.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FieldManager/FieldManagerProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[183/395] /usr/bin/g++ -DBiasVectorSteppableShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/steppables/BiasVectorSteppable/CMakeFiles/BiasVectorSteppableShared.dir/BiasVectorSteppableProxy.cpp.o -MF core/CompuCell3D/steppables/BiasVectorSteppable/CMakeFiles/BiasVectorSteppableShared.dir/BiasVectorSteppableProxy.cpp.o.d -o core/CompuCell3D/steppables/BiasVectorSteppable/CMakeFiles/BiasVectorSteppableShared.dir/BiasVectorSteppableProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BiasVectorSteppable/BiasVectorSteppableProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BiasVectorSteppable/BiasVectorSteppable.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BiasVectorSteppable/BiasVectorSteppableProxy.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[184/395] /usr/bin/g++ -DBiasVectorSteppableShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/steppables/BiasVectorSteppable/CMakeFiles/BiasVectorSteppableShared.dir/BiasVectorSteppable.cpp.o -MF core/CompuCell3D/steppables/BiasVectorSteppable/CMakeFiles/BiasVectorSteppableShared.dir/BiasVectorSteppable.cpp.o.d -o core/CompuCell3D/steppables/BiasVectorSteppable/CMakeFiles/BiasVectorSteppableShared.dir/BiasVectorSteppable.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BiasVectorSteppable/BiasVectorSteppable.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BiasVectorSteppable/BiasVectorSteppable.cpp:4:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BiasVectorSteppable/BiasVectorSteppable.cpp:13:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BiasVectorSteppable/BiasVectorSteppable.h: In constructor ‘CompuCell3D::BiasVectorSteppable::BiasVectorSteppable()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BiasVectorSteppable/BiasVectorSteppable.h:73:27: warning: ‘CompuCell3D::BiasVectorSteppable::boundaryStrategy’ will be initialized after [-Wreorder]
   73 |         BoundaryStrategy *boundaryStrategy;
      |                           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BiasVectorSteppable/BiasVectorSteppable.h:71:20: warning:   ‘CompuCell3D::Automaton* CompuCell3D::BiasVectorSteppable::automaton’ [-Wreorder]
   71 |         Automaton *automaton;
      |                    ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BiasVectorSteppable/BiasVectorSteppable.cpp:21:1: warning:   when initialized here [-Wreorder]
   21 | BiasVectorSteppable::BiasVectorSteppable() : cellFieldG(0), sim(0), potts(0), xmlData(0), boundaryStrategy(0),
      | ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BiasVectorSteppable/BiasVectorSteppable.cpp: In member function ‘void CompuCell3D::BiasVectorSteppable::set_persitent_step_function(CC3DXMLElement*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BiasVectorSteppable/BiasVectorSteppable.cpp:487:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  487 |     for (int i = 0; i < paramVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BiasVectorSteppable/BiasVectorSteppable.cpp: In member function ‘std::vector<double> CompuCell3D::BiasVectorSteppable::white_noise_3d()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BiasVectorSteppable/BiasVectorSteppable.cpp:337:1: warning: control reaches end of non-void function [-Wreturn-type]
  337 | }
      | ^
[185/395] /usr/bin/g++ -DFieldManagerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/steppables/FieldManager/CMakeFiles/FieldManagerShared.dir/FieldManager.cpp.o -MF core/CompuCell3D/steppables/FieldManager/CMakeFiles/FieldManagerShared.dir/FieldManager.cpp.o.d -o core/CompuCell3D/steppables/FieldManager/CMakeFiles/FieldManagerShared.dir/FieldManager.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FieldManager/FieldManager.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FieldManager/FieldManager.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FieldManager/FieldManager.cpp:8:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FieldManager/FieldManager.h: In constructor ‘CompuCell3D::FieldManager::FieldManager()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FieldManager/FieldManager.h:170:23: warning: ‘CompuCell3D::FieldManager::boundaryStrategy’ will be initialized after [-Wreorder]
  170 |     BoundaryStrategy *boundaryStrategy;
      |                       ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FieldManager/FieldManager.h:169:16: warning:   ‘CompuCell3D::Automaton* CompuCell3D::FieldManager::automaton’ [-Wreorder]
  169 |     Automaton *automaton;
      |                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FieldManager/FieldManager.cpp:11:1: warning:   when initialized here [-Wreorder]
   11 | FieldManager::FieldManager():
      | ^~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = float; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:194:21:   required from ‘void CompuCell3D::Simulator::createGenericScalarField(const std::string&, CompuCell3D::array_size_t) [with T = float; std::string = std::__cxx11::basic_string<char>; CompuCell3D::array_size_t = long unsigned int]’
  194 |                     new NumpyArrayWrapper3DImpl<T>(
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  195 |                             std::vector<array_size_t>{
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~
  196 |                                     static_cast<array_size_t>(dim.x),
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  197 |                                     static_cast<array_size_t>(dim.y),
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  198 |                                     static_cast<array_size_t>(dim.z)
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  199 |                             },
      |                             ~~
  200 |                             padding
      |                             ~~~~~~~
  201 |                     )
      |                     ~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FieldManager/FieldManager.cpp:47:61:   required from here
   47 |                         sim->createGenericScalarField<float>(fieldSpec.name, fieldSpec.padding);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<float>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<float>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = double; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:194:21:   required from ‘void CompuCell3D::Simulator::createGenericScalarField(const std::string&, CompuCell3D::array_size_t) [with T = double; std::string = std::__cxx11::basic_string<char>; CompuCell3D::array_size_t = long unsigned int]’
  194 |                     new NumpyArrayWrapper3DImpl<T>(
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  195 |                             std::vector<array_size_t>{
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~
  196 |                                     static_cast<array_size_t>(dim.x),
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  197 |                                     static_cast<array_size_t>(dim.y),
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  198 |                                     static_cast<array_size_t>(dim.z)
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  199 |                             },
      |                             ~~
  200 |                             padding
      |                             ~~~~~~~
  201 |                     )
      |                     ~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FieldManager/FieldManager.cpp:50:62:   required from here
   50 |                         sim->createGenericScalarField<double>(fieldSpec.name, fieldSpec.padding);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<double>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<double>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = char; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:194:21:   required from ‘void CompuCell3D::Simulator::createGenericScalarField(const std::string&, CompuCell3D::array_size_t) [with T = char; std::string = std::__cxx11::basic_string<char>; CompuCell3D::array_size_t = long unsigned int]’
  194 |                     new NumpyArrayWrapper3DImpl<T>(
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  195 |                             std::vector<array_size_t>{
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~
  196 |                                     static_cast<array_size_t>(dim.x),
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  197 |                                     static_cast<array_size_t>(dim.y),
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  198 |                                     static_cast<array_size_t>(dim.z)
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  199 |                             },
      |                             ~~
  200 |                             padding
      |                             ~~~~~~~
  201 |                     )
      |                     ~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FieldManager/FieldManager.cpp:53:60:   required from here
   53 |                         sim->createGenericScalarField<char>(fieldSpec.name, fieldSpec.padding);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<char>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<char>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = unsigned char; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:194:21:   required from ‘void CompuCell3D::Simulator::createGenericScalarField(const std::string&, CompuCell3D::array_size_t) [with T = unsigned char; std::string = std::__cxx11::basic_string<char>; CompuCell3D::array_size_t = long unsigned int]’
  194 |                     new NumpyArrayWrapper3DImpl<T>(
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  195 |                             std::vector<array_size_t>{
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~
  196 |                                     static_cast<array_size_t>(dim.x),
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  197 |                                     static_cast<array_size_t>(dim.y),
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  198 |                                     static_cast<array_size_t>(dim.z)
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  199 |                             },
      |                             ~~
  200 |                             padding
      |                             ~~~~~~~
  201 |                     )
      |                     ~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FieldManager/FieldManager.cpp:56:69:   required from here
   56 |                         sim->createGenericScalarField<unsigned char>(fieldSpec.name, fieldSpec.padding);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<unsigned char>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<unsigned char>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = short int; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:194:21:   required from ‘void CompuCell3D::Simulator::createGenericScalarField(const std::string&, CompuCell3D::array_size_t) [with T = short int; std::string = std::__cxx11::basic_string<char>; CompuCell3D::array_size_t = long unsigned int]’
  194 |                     new NumpyArrayWrapper3DImpl<T>(
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  195 |                             std::vector<array_size_t>{
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~
  196 |                                     static_cast<array_size_t>(dim.x),
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  197 |                                     static_cast<array_size_t>(dim.y),
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  198 |                                     static_cast<array_size_t>(dim.z)
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  199 |                             },
      |                             ~~
  200 |                             padding
      |                             ~~~~~~~
  201 |                     )
      |                     ~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FieldManager/FieldManager.cpp:59:61:   required from here
   59 |                         sim->createGenericScalarField<short>(fieldSpec.name, fieldSpec.padding);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<short int>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<short int>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = short unsigned int; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:194:21:   required from ‘void CompuCell3D::Simulator::createGenericScalarField(const std::string&, CompuCell3D::array_size_t) [with T = short unsigned int; std::string = std::__cxx11::basic_string<char>; CompuCell3D::array_size_t = long unsigned int]’
  194 |                     new NumpyArrayWrapper3DImpl<T>(
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  195 |                             std::vector<array_size_t>{
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~
  196 |                                     static_cast<array_size_t>(dim.x),
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  197 |                                     static_cast<array_size_t>(dim.y),
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  198 |                                     static_cast<array_size_t>(dim.z)
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  199 |                             },
      |                             ~~
  200 |                             padding
      |                             ~~~~~~~
  201 |                     )
      |                     ~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FieldManager/FieldManager.cpp:62:70:   required from here
   62 |                         sim->createGenericScalarField<unsigned short>(fieldSpec.name, fieldSpec.padding);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<short unsigned int>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<short unsigned int>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = int; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:194:21:   required from ‘void CompuCell3D::Simulator::createGenericScalarField(const std::string&, CompuCell3D::array_size_t) [with T = int; std::string = std::__cxx11::basic_string<char>; CompuCell3D::array_size_t = long unsigned int]’
  194 |                     new NumpyArrayWrapper3DImpl<T>(
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  195 |                             std::vector<array_size_t>{
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~
  196 |                                     static_cast<array_size_t>(dim.x),
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  197 |                                     static_cast<array_size_t>(dim.y),
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  198 |                                     static_cast<array_size_t>(dim.z)
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  199 |                             },
      |                             ~~
  200 |                             padding
      |                             ~~~~~~~
  201 |                     )
      |                     ~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FieldManager/FieldManager.cpp:65:59:   required from here
   65 |                         sim->createGenericScalarField<int>(fieldSpec.name, fieldSpec.padding);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<int>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<int>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = unsigned int; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:194:21:   required from ‘void CompuCell3D::Simulator::createGenericScalarField(const std::string&, CompuCell3D::array_size_t) [with T = unsigned int; std::string = std::__cxx11::basic_string<char>; CompuCell3D::array_size_t = long unsigned int]’
  194 |                     new NumpyArrayWrapper3DImpl<T>(
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  195 |                             std::vector<array_size_t>{
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~
  196 |                                     static_cast<array_size_t>(dim.x),
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  197 |                                     static_cast<array_size_t>(dim.y),
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  198 |                                     static_cast<array_size_t>(dim.z)
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  199 |                             },
      |                             ~~
  200 |                             padding
      |                             ~~~~~~~
  201 |                     )
      |                     ~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FieldManager/FieldManager.cpp:68:68:   required from here
   68 |                         sim->createGenericScalarField<unsigned int>(fieldSpec.name, fieldSpec.padding);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<unsigned int>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<unsigned int>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = long int; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:194:21:   required from ‘void CompuCell3D::Simulator::createGenericScalarField(const std::string&, CompuCell3D::array_size_t) [with T = long int; std::string = std::__cxx11::basic_string<char>; CompuCell3D::array_size_t = long unsigned int]’
  194 |                     new NumpyArrayWrapper3DImpl<T>(
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  195 |                             std::vector<array_size_t>{
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~
  196 |                                     static_cast<array_size_t>(dim.x),
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  197 |                                     static_cast<array_size_t>(dim.y),
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  198 |                                     static_cast<array_size_t>(dim.z)
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  199 |                             },
      |                             ~~
  200 |                             padding
      |                             ~~~~~~~
  201 |                     )
      |                     ~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FieldManager/FieldManager.cpp:71:60:   required from here
   71 |                         sim->createGenericScalarField<long>(fieldSpec.name, fieldSpec.padding);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<long int>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<long int>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = long unsigned int; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:194:21:   required from ‘void CompuCell3D::Simulator::createGenericScalarField(const std::string&, CompuCell3D::array_size_t) [with T = long unsigned int; std::string = std::__cxx11::basic_string<char>; CompuCell3D::array_size_t = long unsigned int]’
  194 |                     new NumpyArrayWrapper3DImpl<T>(
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  195 |                             std::vector<array_size_t>{
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~~
  196 |                                     static_cast<array_size_t>(dim.x),
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  197 |                                     static_cast<array_size_t>(dim.y),
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  198 |                                     static_cast<array_size_t>(dim.z)
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  199 |                             },
      |                             ~~
  200 |                             padding
      |                             ~~~~~~~
  201 |                     )
      |                     ~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FieldManager/FieldManager.cpp:74:69:   required from here
   74 |                         sim->createGenericScalarField<unsigned long>(fieldSpec.name, fieldSpec.padding);
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<long unsigned int>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<long unsigned int>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:150:22:   required from here
  150 |         virtual bool isValid(const Point3D &pt) const {
      |                      ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = long int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:150:22:   required from here
  150 |         virtual bool isValid(const Point3D &pt) const {
      |                      ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:150:22:   required from here
  150 |         virtual bool isValid(const Point3D &pt) const {
      |                      ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:150:22:   required from here
  150 |         virtual bool isValid(const Point3D &pt) const {
      |                      ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = short unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:150:22:   required from here
  150 |         virtual bool isValid(const Point3D &pt) const {
      |                      ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = short int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:150:22:   required from here
  150 |         virtual bool isValid(const Point3D &pt) const {
      |                      ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = unsigned char]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:150:22:   required from here
  150 |         virtual bool isValid(const Point3D &pt) const {
      |                      ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = char]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:150:22:   required from here
  150 |         virtual bool isValid(const Point3D &pt) const {
      |                      ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = double]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:150:22:   required from here
  150 |         virtual bool isValid(const Point3D &pt) const {
      |                      ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = float]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:150:22:   required from here
  150 |         virtual bool isValid(const Point3D &pt) const {
      |                      ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
[186/395] /usr/bin/g++ -DPDESolversShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/AdvectionDiffusionSolverFE.cpp.o -MF core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/AdvectionDiffusionSolverFE.cpp.o.d -o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/AdvectionDiffusionSolverFE.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/AdvectionDiffusionSolverFE.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/AdvectionDiffusionSolverFE.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /usr/include/c++/16/bits/locale_classes.h:43,
                 from /usr/include/c++/16/bits/ios_base.h:43,
                 from /usr/include/c++/16/ios:46,
                 from /usr/include/c++/16/bits/ostream.h:43,
                 from /usr/include/c++/16/ostream:42,
                 from /usr/include/c++/16/iostream:43,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3DExceptions.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:6:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:33:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DBordersField3DAdapter<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/AdvectionDiffusionSolverFE.cpp:93:43:   required from here
   93 |         simPtr->registerConcentrationField(concentrationFieldNameVector[i], concentrationFieldVector[i]);
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:515:18: note:   by ‘void CompuCell3D::Array3DBordersField3DAdapter<T>::setDim(CompuCell3D::Dim3D) [with T = float]’
  515 |     virtual void setDim(const Dim3D theDim) {
      |                  ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/AdvectionDiffusionSolverFE.cpp: In member function ‘void CompuCell3D::AdvectionDiffusionSolverFE::secreteSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/AdvectionDiffusionSolverFE.cpp:329:35: warning: variable ‘concentrationEndItr’ set but not used [-Wunused-but-set-variable=]
  329 |     map<CellG *, float>::iterator concentrationEndItr = concentrationField->end();
      |                                   ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/AdvectionDiffusionSolverFE.cpp: In member function ‘void CompuCell3D::AdvectionDiffusionSolverFE::secreteOnContactSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/AdvectionDiffusionSolverFE.cpp:377:35: warning: variable ‘concentrationEndItr’ set but not used [-Wunused-but-set-variable=]
  377 |     map<CellG *, float>::iterator concentrationEndItr = concentrationField->end();
      |                                   ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/AdvectionDiffusionSolverFE.cpp: In member function ‘void CompuCell3D::AdvectionDiffusionSolverFE::diffuseSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/AdvectionDiffusionSolverFE.cpp:457:11: warning: unused variable ‘currentCellType’ [-Wunused-variable]
  457 |     short currentCellType = 0;
      |           ^~~~~~~~~~~~~~~
[187/395] /usr/bin/g++ -DPDESolversShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/FastDiffusionSolver2DFE.cpp.o -MF core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/FastDiffusionSolver2DFE.cpp.o.d -o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/FastDiffusionSolver2DFE.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FastDiffusionSolver2DFE.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FastDiffusionSolver2DFE.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /usr/include/c++/16/bits/locale_classes.h:43,
                 from /usr/include/c++/16/bits/ios_base.h:43,
                 from /usr/include/c++/16/ios:46,
                 from /usr/include/c++/16/bits/ostream.h:43,
                 from /usr/include/c++/16/ostream:42,
                 from /usr/include/c++/16/iostream:43,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3DExceptions.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:6:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:33:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array2DContiguous<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FastDiffusionSolver2DFE.cpp:171:47:   required from here
  171 |     workFieldDim = concentrationFieldVector[0]->getInternalDim();
      |                                               ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:125:23: warning: ‘CompuCell3D::Dim3D CompuCell3D::Field3DImpl<T>::getDim() const [with T = float]’ was hidden [-Woverloaded-virtual=]
  125 |         virtual Dim3D getDim() const { return dim; }
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:1164:15: note:   by ‘CompuCell3D::Dim3D CompuCell3D::Array2DContiguous<T>::getDim() [with T = float]’
 1164 |         Dim3D getDim() { return Field3DImpl<T>::dim; }
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:1277:10: note:   by ‘void CompuCell3D::Array2DContiguous<T>::setDim(CompuCell3D::Dim3D) [with T = float]’
 1277 |     void Array2DContiguous<T>::setDim(const Dim3D newDim) {
      |          ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FastDiffusionSolver2DFE.cpp: In member function ‘void CompuCell3D::FastDiffusionSolver2DFE::diffuseSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FastDiffusionSolver2DFE.cpp:1290:37: warning: unused variable ‘nCell’ [-Wunused-variable]
 1290 |         CellG *currentCellPtr = 0, *nCell = 0;
      |                                     ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FastDiffusionSolver2DFE.cpp:1291:15: warning: unused variable ‘currentCellType’ [-Wunused-variable]
 1291 |         short currentCellType = 0;
      |               ^~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FastDiffusionSolver2DFE.cpp:1295:15: warning: unused variable ‘neighborCounter’ [-Wunused-variable]
 1295 |         short neighborCounter = 0;
      |               ^~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FastDiffusionSolver2DFE.cpp:1296:16: warning: unused variable ‘neighborCellPtr’ [-Wunused-variable]
 1296 |         CellG *neighborCellPtr = 0;
      |                ^~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FastDiffusionSolver2DFE.cpp:1245:27: warning: unused variable ‘concentrationFieldPtr’ [-Wunused-variable]
 1245 |     ConcentrationField_t *concentrationFieldPtr = concentrationFieldVector[idx];
      |                           ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘CompuCell3D::Array2DContiguous<T>::Array2DContiguous(CompuCell3D::Dim3D&, T&) [with T = float]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusableVector2D.h:68:52:   required from ‘void CompuCell3D::DiffusableVector2D<precision>::allocateDiffusableFieldVector(unsigned int, CompuCell3D::Dim3D) [with precision = float]’
   68 |                 concentrationFieldVector.push_back(new Array2DContiguous<precision>(fieldDim, val));
      |                                                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FastDiffusionSolver2DFE.cpp:170:34:   required from here
  170 |     allocateDiffusableFieldVector(diffSecrFieldTuppleVec.size(), fieldDim);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:1185:13: warning: ‘CompuCell3D::Array2DContiguous<float>::shiftArray’ will be initialized after [-Wreorder]
 1185 |         int shiftArray;
      |             ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:1184:13: warning:   ‘int CompuCell3D::Array2DContiguous<float>::shiftSwap’ [-Wreorder]
 1184 |         int shiftSwap;
      |             ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:1089:9: warning:   when initialized here [-Wreorder]
 1089 |         Array2DContiguous(Dim3D &_dim, T &_initVal = T()) :
      |         ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FastDiffusionSolver2DFE.cpp: In member function ‘CompuCell3D::FastDiffusionSolver2DFE::secreteOnContactSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FastDiffusionSolver2DFE.cpp:393:9: warning: ‘contactCellMapMediumPtr’ may be used uninitialized [-Wmaybe-uninitialized]
  393 | #pragma omp parallel
      |         ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FastDiffusionSolver2DFE.cpp:354:37: note: ‘contactCellMapMediumPtr’ was declared here
  354 |     std::map<unsigned char, float> *contactCellMapMediumPtr;
      |                                     ^~~~~~~~~~~~~~~~~~~~~~~
[188/395] /usr/bin/g++ -DPDESolversShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/DiffusionSolverFE_CPU.cpp.o -MF core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/DiffusionSolverFE_CPU.cpp.o.d -o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/DiffusionSolverFE_CPU.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusableVectorCommon.h:10,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.h:9:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PixelTracker/PixelTrackerPlugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.h:27,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.h:12:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Steppable.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.h:5:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DContiguous<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:35:36:   required from here
   35 |         concentrationFieldVector[i]->resizeAndShift(ev.newDim, ev.shiftVec);
      |                                    ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:125:23: warning: ‘CompuCell3D::Dim3D CompuCell3D::Field3DImpl<T>::getDim() const [with T = float]’ was hidden [-Woverloaded-virtual=]
  125 |         virtual Dim3D getDim() const { return dim; }
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:823:15: note:   by ‘CompuCell3D::Dim3D CompuCell3D::Array3DContiguous<T>::getDim() [with T = float]’
  823 |         Dim3D getDim() { return Field3DImpl<T>::dim; }
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:926:10: note:   by ‘void CompuCell3D::Array3DContiguous<T>::setDim(CompuCell3D::Dim3D) [with T = float]’
  926 |     void Array3DContiguous<T>::setDim(const Dim3D newDim) {
      |          ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp: In member function ‘virtual void CompuCell3D::DiffusionSolverFE_CPU::secreteConstantConcentrationSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:401:15: warning: unused variable ‘currentConcentration’ [-Wunused-variable]
  401 |         float currentConcentration;
      |               ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp: In member function ‘void CompuCell3D::DiffusionSolverFE_CPU::getMinMaxBox(bool, int, CompuCell3D::Dim3D&, CompuCell3D::Dim3D&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:448:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  448 |         isMaxThread = (threadNumber == pUtils->getNumberOfWorkNodesFESolverWithBoxWatcher() - 1);
      |                        ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:454:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  454 |         isMaxThread = (threadNumber == pUtils->getNumberOfWorkNodesFESolver() - 1);
      |                        ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<unsigned char>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:952:11:   required from ‘class CompuCell3D::Array3DCUDA<unsigned char>’
  952 |     class Array3DCUDA : public Field3DImpl<T> {
      |           ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:949:52:   required from here
  949 |                     currentCellType = cellTypeArray.getDirect(x, y, z);
      |                                                    ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = unsigned char]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = unsigned char]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DCUDA<unsigned char>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:949:52:   required from here
  949 |                     currentCellType = cellTypeArray.getDirect(x, y, z);
      |                                                    ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:125:23: warning: ‘CompuCell3D::Dim3D CompuCell3D::Field3DImpl<T>::getDim() const [with T = unsigned char]’ was hidden [-Woverloaded-virtual=]
  125 |         virtual Dim3D getDim() const { return dim; }
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:1029:15: note:   by ‘CompuCell3D::Dim3D CompuCell3D::Array3DCUDA<T>::getDim() [with T = unsigned char]’
 1029 |         Dim3D getDim() { return Field3DImpl<T>::dim; }
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<signed char>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:952:11:   required from ‘class CompuCell3D::Array3DCUDA<signed char>’
  952 |     class Array3DCUDA : public Field3DImpl<T> {
      |           ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:961:32:   required from here
  961 |                     if (bcField.getDirect(x, y, z) == BoundaryConditionSpecifier::INTERNAL) {//internal pixel
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = signed char]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = signed char]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DCUDA<signed char>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:961:32:   required from here
  961 |                     if (bcField.getDirect(x, y, z) == BoundaryConditionSpecifier::INTERNAL) {//internal pixel
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:125:23: warning: ‘CompuCell3D::Dim3D CompuCell3D::Field3DImpl<T>::getDim() const [with T = signed char]’ was hidden [-Woverloaded-virtual=]
  125 |         virtual Dim3D getDim() const { return dim; }
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:1029:15: note:   by ‘CompuCell3D::Dim3D CompuCell3D::Array3DCUDA<T>::getDim() [with T = signed char]’
 1029 |         Dim3D getDim() { return Field3DImpl<T>::dim; }
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp: In member function ‘virtual void CompuCell3D::DiffusionSolverFE_CPU::diffuseSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:966:43: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
  966 |                         for (register int i = 0; i <= maxNeighborIndex /*offsetVec.size()*/ ; ++i) {
      |                                           ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:966:52: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  966 |                         for (register int i = 0; i <= maxNeighborIndex /*offsetVec.size()*/ ; ++i) {
      |                                                  ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:1003:47: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
 1003 |                             for (register int i = 0; i <= maxNeighborIndex; ++i) {
      |                                               ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:1003:56: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1003 |                             for (register int i = 0; i <= maxNeighborIndex; ++i) {
      |                                                      ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:1026:43: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
 1026 |                         for (register int i = 0; i <= maxNeighborIndex /*offsetVec.size()*/ ; ++i) {
      |                                           ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:1026:52: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1026 |                         for (register int i = 0; i <= maxNeighborIndex /*offsetVec.size()*/ ; ++i) {
      |                                                  ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:1095:47: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
 1095 |                             for (register int i = 0; i <= maxNeighborIndex; ++i) {
      |                                               ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:1095:56: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1095 |                             for (register int i = 0; i <= maxNeighborIndex; ++i) {
      |                                                      ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:913:16: warning: unused variable ‘currentCellPtr’ [-Wunused-variable]
  913 |         CellG *currentCellPtr = 0, *nCell = 0;
      |                ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:913:37: warning: unused variable ‘nCell’ [-Wunused-variable]
  913 |         CellG *currentCellPtr = 0, *nCell = 0;
      |                                     ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:869:10: warning: variable ‘avoidMedium’ set but not used [-Wunused-but-set-variable=]
  869 |     bool avoidMedium = false;
      |          ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:870:10: warning: variable ‘avoidDecayInMedium’ set but not used [-Wunused-but-set-variable=]
  870 |     bool avoidDecayInMedium = false;
      |          ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘CompuCell3D::Array3DContiguous<T>::Array3DContiguous(CompuCell3D::Dim3D&, T&) [with T = float]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusableVectorCommon.h:77:52:   required from ‘void CompuCell3D::DiffusableVectorCommon<precision, Array_Type>::allocateDiffusableFieldVector(unsigned int, CompuCell3D::Dim3D) [with precision = float; Array_Type = CompuCell3D::Array3DContiguous]’
   77 |                 concentrationFieldVector.push_back(new Array_t(fieldDim, val));
      |                                                    ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusableVectorCommon.h:69:22:   required from here
   69 |         virtual void allocateDiffusableFieldVector(unsigned int numberOfFields, Dim3D fieldDim) {
      |                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:844:13: warning: ‘CompuCell3D::Array3DContiguous<float>::shiftArray’ will be initialized after [-Wreorder]
  844 |         int shiftArray;
      |             ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:843:13: warning:   ‘int CompuCell3D::Array3DContiguous<float>::shiftSwap’ [-Wreorder]
  843 |         int shiftSwap;
      |             ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:742:9: warning:   when initialized here [-Wreorder]
  742 |         Array3DContiguous(Dim3D &_dim, T &_initVal = T()) :
      |         ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp: In member function ‘CompuCell3D::DiffusionSolverFE_CPU::secreteOnContactSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:247:9: warning: ‘contactCellMapMediumPtr’ may be used uninitialized [-Wmaybe-uninitialized]
  247 | #pragma omp parallel
      |         ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.cpp:205:37: note: ‘contactCellMapMediumPtr’ was declared here
  205 |     std::map<unsigned char, float> *contactCellMapMediumPtr;
      |                                     ^~~~~~~~~~~~~~~~~~~~~~~
[189/395] /usr/bin/g++ -DPDESolversShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/DiffusionSolverFE_CPU_Implicit.cpp.o -MF core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/DiffusionSolverFE_CPU_Implicit.cpp.o.d -o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/DiffusionSolverFE_CPU_Implicit.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusableVectorCommon.h:10,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.h:9:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PixelTracker/PixelTrackerPlugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.h:27,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.h:12:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /usr/include/c++/16/bits/locale_classes.h:43,
                 from /usr/include/c++/16/bits/ios_base.h:43,
                 from /usr/include/c++/16/ios:46,
                 from /usr/include/c++/16/bits/ostream.h:43,
                 from /usr/include/c++/16/ostream:42,
                 from /usr/include/c++/16/iostream:43,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Point3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Dim3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3DEvents.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Steppable.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.h:5:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Core:248,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/SparseCore:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Sparse:17,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/util/Memory.h: In function ‘Index Eigen::internal::first_aligned(const Scalar*, Index)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/util/Memory.h:449:48: warning: typedef ‘Packet’ locally defined but not used [-Wunused-local-typedefs]
  449 |   typedef typename packet_traits<Scalar>::type Packet;
      |                                                ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Core:268:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Functors.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Functors.h:936:28: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  936 | struct functor_traits<std::binder2nd<T> >
      |                            ^~~~~~~~~
In file included from /usr/include/c++/16/bits/stl_function.h:1594:
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Functors.h:940:28: warning: ‘template<class _Operation> class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  940 | struct functor_traits<std::binder1st<T> >
      |                            ^~~~~~~~~
/usr/include/c++/16/backward/binders.h:108:11: note: declared here
  108 |     class binder1st
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Functors.h:944:28: warning: ‘template<class _Predicate> class std::unary_negate’ is deprecated [-Wdeprecated-declarations]
  944 | struct functor_traits<std::unary_negate<T> >
      |                            ^~~~~~~~~~~~
/usr/include/c++/16/bits/stl_function.h:1112:33: note: declared here
 1112 |     class _GLIBCXX17_DEPRECATED unary_negate
      |                                 ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Functors.h:948:28: warning: ‘template<class _Predicate> class std::binary_negate’ is deprecated [-Wdeprecated-declarations]
  948 | struct functor_traits<std::binary_negate<T> >
      |                            ^~~~~~~~~~~~~
/usr/include/c++/16/bits/stl_function.h:1139:33: note: declared here
 1139 |     class _GLIBCXX17_DEPRECATED binary_negate
      |                                 ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/MatrixBase.h:138,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Core:271:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/MatrixCwiseUnaryOps.h:62:32: warning: ‘template<class _Operation> class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
   62 | inline const CwiseUnaryOp<std::binder1st<std::equal_to<Scalar> >, const Derived>
      |                                ^~~~~~~~~
/usr/include/c++/16/backward/binders.h:108:11: note: declared here
  108 |     class binder1st
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/MatrixCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder1st<std::equal_to<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::MatrixBase<Derived>::cwiseEqual(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/MatrixCwiseUnaryOps.h:65:28: warning: ‘template<class _Operation> class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
   65 |   return CwiseUnaryOp<std::binder1st<std::equal_to<Scalar> >,const Derived>
      |                            ^~~~~~~~~
/usr/include/c++/16/backward/binders.h:108:11: note: declared here
  108 |     class binder1st
      |           ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Core:317:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In member function ‘void Eigen::internal::gebp_kernel<LhsScalar, RhsScalar, Index, mr, nr, ConjugateLhs, ConjugateRhs>::operator()(ResScalar*, Index, const LhsScalar*, const RhsScalar*, Index, Index, Index, ResScalar, Index, Index, Index, Index, RhsScalar*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h:567:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
  567 |         if(nr==4) traits.initAcc(C3);
      |         ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h:568:19: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
  568 |                   traits.initAcc(C4);
      |                   ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h:939:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
  939 |         if(nr==4) R3 = ploadu<ResPacket>(r3);
      |         ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h:941:19: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
  941 |                   traits.acc(C0, alphav, R0);
      |                   ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h:944:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
  944 |         if(nr==4) traits.acc(C3, alphav, R3);
      |         ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h:946:19: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
  946 |                   pstoreu(r0, R0);
      |                   ^~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Core:324:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h: In static member function ‘static void Eigen::internal::selfadjoint_matrix_vector_product<Scalar, Index, StorageOrder, UpLo, ConjugateLhs, ConjugateRhs, Version>::run(Index, const Scalar*, Index, const Scalar*, Index, Scalar*, Scalar)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h:74:43: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
   74 |     register const Scalar* EIGEN_RESTRICT A0 = lhs + j*lhsStride;
      |                                           ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h:75:43: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
   75 |     register const Scalar* EIGEN_RESTRICT A1 = lhs + (j+1)*lhsStride;
      |                                           ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h:142:43: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
  142 |     register const Scalar* EIGEN_RESTRICT A0 = lhs + j*lhsStride;
      |                                           ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h:38:44: warning: typedef ‘RealScalar’ locally defined but not used [-Wunused-local-typedefs]
   38 |   typedef typename NumTraits<Scalar>::Real RealScalar;
      |                                            ^~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/ArrayBase.h:108,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Core:340:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/MatrixCwiseUnaryOps.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/MatrixCwiseUnaryOps.h:62:32: warning: ‘template<class _Operation> class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
   62 | inline const CwiseUnaryOp<std::binder1st<std::equal_to<Scalar> >, const Derived>
      |                                ^~~~~~~~~
/usr/include/c++/16/backward/binders.h:108:11: note: declared here
  108 |     class binder1st
      |           ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/ArrayBase.h:109:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:190:34: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  190 |   inline const CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                                  ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:196:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  196 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator==,  std::equal_to)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:190:34: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  190 |   inline const CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                                  ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:197:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  197 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator!=,  std::not_equal_to)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:190:34: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  190 |   inline const CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                                  ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:198:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  198 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator<,   std::less)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:190:34: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  190 |   inline const CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                                  ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:199:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  199 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator<=,  std::less_equal)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:190:34: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  190 |   inline const CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                                  ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:200:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  200 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator>,   std::greater)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:190:34: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  190 |   inline const CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                                  ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:201:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  201 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator>=,  std::greater_equal)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/MatrixCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder1st<std::equal_to<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::ArrayBase<Derived>::cwiseEqual(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/MatrixCwiseUnaryOps.h:65:28: warning: ‘template<class _Operation> class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
   65 |   return CwiseUnaryOp<std::binder1st<std::equal_to<Scalar> >,const Derived>
      |                            ^~~~~~~~~
/usr/include/c++/16/backward/binders.h:108:11: note: declared here
  108 |     class binder1st
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder2nd<std::equal_to<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::ArrayBase<Derived>::operator==(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:192:30: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  192 |     return CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                              ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:196:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  196 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator==,  std::equal_to)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder2nd<std::not_equal_to<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::ArrayBase<Derived>::operator!=(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:192:30: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  192 |     return CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                              ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:197:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  197 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator!=,  std::not_equal_to)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder2nd<std::less<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::ArrayBase<Derived>::operator<(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:192:30: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  192 |     return CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                              ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:198:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  198 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator<,   std::less)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder2nd<std::less_equal<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::ArrayBase<Derived>::operator<=(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:192:30: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  192 |     return CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                              ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:199:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  199 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator<=,  std::less_equal)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder2nd<std::greater<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::ArrayBase<Derived>::operator>(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:192:30: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  192 |     return CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                              ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:200:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  200 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator>,   std::greater)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder2nd<std::greater_equal<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::ArrayBase<Derived>::operator>=(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:192:30: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  192 |     return CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                              ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:201:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  201 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator>=,  std::greater_equal)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/SparseMatrixBase.h:137,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/SparseCore:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/../plugins/MatrixCwiseUnaryOps.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/../plugins/MatrixCwiseUnaryOps.h:62:32: warning: ‘template<class _Operation> class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
   62 | inline const CwiseUnaryOp<std::binder1st<std::equal_to<Scalar> >, const Derived>
      |                                ^~~~~~~~~
/usr/include/c++/16/backward/binders.h:108:11: note: declared here
  108 |     class binder1st
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/../plugins/MatrixCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder1st<std::equal_to<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::SparseMatrixBase<Derived>::cwiseEqual(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/../plugins/MatrixCwiseUnaryOps.h:65:28: warning: ‘template<class _Operation> class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
   65 |   return CwiseUnaryOp<std::binder1st<std::equal_to<Scalar> >,const Derived>
      |                            ^~~~~~~~~
/usr/include/c++/16/backward/binders.h:108:11: note: declared here
  108 |     class binder1st
      |           ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/SparseCore:40:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/SparseMatrix.h: In function ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/SparseMatrix.h:1006:44: warning: typedef ‘Index’ locally defined but not used [-Wunused-local-typedefs]
 1006 |   typedef typename SparseMatrixType::Index Index;
      |                                            ^~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/SparseCore:59:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h: In member function ‘void Eigen::SparseSelfAdjointTimeDenseProduct<Lhs, Rhs, UpLo>::scaleAndAddTo(Dest&, Scalar) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h:215:56: warning: typedef ‘_Rhs’ locally defined but not used [-Wunused-local-typedefs]
  215 |       typedef typename internal::remove_all<Rhs>::type _Rhs;
      |                                                        ^~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/OrderingMethods:19,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Sparse:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/OrderingMethods/Amd.h: In function ‘void Eigen::internal::minimum_degree_ordering(Eigen::SparseMatrix<Scalar, 0, Index>&, Eigen::PermutationMatrix<-1, -1, Index>&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/OrderingMethods/Amd.h:97:47: warning: typedef ‘CCS’ locally defined but not used [-Wunused-local-typedefs]
   97 |   typedef SparseMatrix<Scalar,ColMajor,Index> CCS;
      |                                               ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.h:282:22: warning: ‘void CompuCell3D::DiffusionSolverFE<Cruncher>::Scale(const std::vector<float>&, float, const std::vector<float>&) [with Cruncher = CompuCell3D::DiffusionSolverFE_CPU_Implicit]’ was hidden [-Woverloaded-virtual=]
  282 |         virtual void Scale(std::vector<float> const &maxDiffConstVec, float maxStableDiffConstant,
      |                      ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.h:34:22: note:   by ‘virtual void CompuCell3D::DiffusionSolverFE_CPU_Implicit::Scale(const std::vector<float>&, float)’
   34 |         virtual void Scale(std::vector<float> const &maxDiffConstVec, float maxStableDiffConstant);
      |                      ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp: In function ‘void CompareMatrices(const SparseMatrixT&, const SparseMatrixT&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp:54:16: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else]
   54 |             if (it1.value() != it2.value())
      |                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp:58:16: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else]
   58 |             if (it1.value() != it2.value())
      |                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<unsigned char>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:952:11:   required from ‘class CompuCell3D::Array3DCUDA<unsigned char>’
  952 |     class Array3DCUDA : public Field3DImpl<T> {
      |           ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp:73:38:   required from here
   73 |         size_t totalExtSize=h_celltype_field->getArraySize();
      |                                             ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = unsigned char]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = unsigned char]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DCUDA<unsigned char>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp:73:38:   required from here
   73 |         size_t totalExtSize=h_celltype_field->getArraySize();
      |                                             ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:125:23: warning: ‘CompuCell3D::Dim3D CompuCell3D::Field3DImpl<T>::getDim() const [with T = unsigned char]’ was hidden [-Woverloaded-virtual=]
  125 |         virtual Dim3D getDim() const { return dim; }
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:1029:15: note:   by ‘CompuCell3D::Dim3D CompuCell3D::Array3DCUDA<T>::getDim() [with T = unsigned char]’
 1029 |         Dim3D getDim() { return Field3DImpl<T>::dim; }
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp: In member function ‘void CompuCell3D::DiffusionSolverFE_CPU_Implicit::Implicit(const ConcentrationField_t&, const CompuCell3D::DiffusionData&, const EigenRealVector&, EigenRealVector&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp:89:34: warning: ‘*’ in boolean context, suggest ‘&&’ instead [-Wint-in-bool-context]
   89 |     eigenM_new.reserve(totalSize * is2D ? 5 : 7);
      |                        ~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp:109:13: warning: variable ‘lastJ’ set but not used [-Wunused-but-set-variable=]
  109 |         int lastJ = -1;
      |             ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp:157:44: warning: the address of ‘time_t time(time_t*)’ will never be NULL [-Waddress]
  157 |         CC3D_Log(LOG_TRACE) << "It took "<<time<<" s to assemble a matrix with new algorithm" << std::endl;
      |                                            ^~~~
In file included from /usr/include/pthread.h:23,
                 from /usr/include/c++/16/aarch64-redhat-linux/bits/gthr-default.h:35,
                 from /usr/include/c++/16/aarch64-redhat-linux/bits/gthr.h:157,
                 from /usr/include/c++/16/ext/atomicity.h:37,
                 from /usr/include/c++/16/bits/ios_base.h:41:
/usr/include/time.h:85:15: note: ‘time_t time(time_t*)’ declared here
   85 | extern time_t time (time_t *__timer) __THROW;
      |               ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp:91:9: warning: unused variable ‘prevZ’ [-Wunused-variable]
   91 |     int prevZ = -1;
      |         ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DContiguous<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp:216:61:   required from here
  216 |     CC3D_Log(LOG_TRACE) << "shiftArray="<<concentrationField.getShiftArray()<<" shiftSwap="<<concentrationField.getShiftSwap();
      |                                                             ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:125:23: warning: ‘CompuCell3D::Dim3D CompuCell3D::Field3DImpl<T>::getDim() const [with T = float]’ was hidden [-Woverloaded-virtual=]
  125 |         virtual Dim3D getDim() const { return dim; }
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:823:15: note:   by ‘CompuCell3D::Dim3D CompuCell3D::Array3DContiguous<T>::getDim() [with T = float]’
  823 |         Dim3D getDim() { return Field3DImpl<T>::dim; }
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:926:10: note:   by ‘void CompuCell3D::Array3DContiguous<T>::setDim(CompuCell3D::Dim3D) [with T = float]’
  926 |     void Array3DContiguous<T>::setDim(const Dim3D newDim) {
      |          ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp: In member function ‘void CompuCell3D::DiffusionSolverFE_CPU_Implicit::diffuseSingleFieldImpl(ConcentrationField_t&, CompuCell3D::DiffusionData&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp:253:27: warning: unused variable ‘concentrationFieldPtr’ [-Wunused-variable]
  253 |     ConcentrationField_t *concentrationFieldPtr = &concentrationField;
      |                           ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp:259:10: warning: variable ‘avoidMedium’ set but not used [-Wunused-but-set-variable=]
  259 |     bool avoidMedium = false;
      |          ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp:260:10: warning: variable ‘avoidDecayInMedium’ set but not used [-Wunused-but-set-variable=]
  260 |     bool avoidDecayInMedium = false;
      |          ^~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Core:276:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h: In instantiation of ‘struct Eigen::internal::assign_traits<Eigen::Matrix<float, -1, 1>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float>, const Eigen::Block<const Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, const Eigen::SparseSelfAdjointTimeDenseProduct<Eigen::SparseMatrix<float, 1>, Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, 1> > >’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:499:116:   required from ‘Derived& Eigen::DenseBase<Derived>::lazyAssign(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float>, const Eigen::Block<const Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, const Eigen::SparseSelfAdjointTimeDenseProduct<Eigen::SparseMatrix<float, 1>, Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  499 |   internal::assign_impl<Derived, OtherDerived, int(SameType) ? int(internal::assign_traits<Derived, OtherDerived>::Traversal)
      |                                                                                                                    ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/PlainObjectBase.h:393:30:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::lazyAssign(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float>, const Eigen::Block<const Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, const Eigen::SparseSelfAdjointTimeDenseProduct<Eigen::SparseMatrix<float, 1>, Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  393 |       return Base::lazyAssign(other.derived());
      |              ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:522:107:   required from ‘static Derived& Eigen::internal::assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<float, -1, 1>; OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float>, const Eigen::Block<const Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, const Eigen::SparseSelfAdjointTimeDenseProduct<Eigen::SparseMatrix<float, 1>, Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, 1> >]’
  522 |   static EIGEN_STRONG_INLINE Derived& run(Derived& dst, const OtherDerived& other) { return dst.lazyAssign(other.derived()); }
      |                                                                                             ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/PlainObjectBase.h:599:72:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float>, const Eigen::Block<const Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, const Eigen::SparseSelfAdjointTimeDenseProduct<Eigen::SparseMatrix<float, 1>, Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  599 |       return internal::assign_selector<Derived,OtherDerived,false>::run(this->derived(), other.derived());
      |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Matrix.h:281:25:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float>, const Eigen::Block<const Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, const Eigen::SparseSelfAdjointTimeDenseProduct<Eigen::SparseMatrix<float, 1>, Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, 1> >; _Scalar = float; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
  281 |       Base::_set_noalias(other);
      |       ~~~~~~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:43:29:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
   43 |   VectorType residual = rhs - mat * x; //initial residual
      |                         ~~~~^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/misc/Solve.h:51:74:   required from ‘void Eigen::internal::solve_retval_base<DecompositionType, Rhs>::evalTo(Dest&) const [with Dest = Eigen::Matrix<float, -1, 1>; _DecompositionType = Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >; Rhs = Eigen::Matrix<float, -1, 1>]’
   51 |     static_cast<const solve_retval<DecompositionType,Rhs>*>(this)->evalTo(dst);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/ReturnByValue.h:61:48:   required from ‘void Eigen::ReturnByValue<Derived>::evalTo(Dest&) const [with Dest = Eigen::Matrix<float, -1, 1>; Derived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >]’
   61 |     { static_cast<const Derived*>(this)->evalTo(dst); }
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:577:15:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  577 |   other.evalTo(derived());
      |   ~~~~~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/PlainObjectBase.h:400:29:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  400 |       return Base::operator=(func);
      |              ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Matrix.h:190:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; _Scalar = float; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
  190 |       return Base::operator=(func);
      |              ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp:176:19:   required from here
  176 |     x = cg.solve(b);
      |                   ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:51:27: warning: enum constant in boolean context [-Wint-in-bool-context]
   51 |                        && int(DstIsAligned) && int(SrcIsAligned),
      |                           ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:53:57: warning: enum constant in boolean context [-Wint-in-bool-context]
   53 |     MayLinearVectorize = MightVectorize && MayLinearize && DstHasDirectAccess
      |                          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:54:41: warning: enum constant in boolean context [-Wint-in-bool-context]
   54 |                        && (DstIsAligned || MaxSizeAtCompileTime == Dynamic),
      |                           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:57:41: warning: enum constant in boolean context [-Wint-in-bool-context]
   57 |     MaySliceVectorize  = MightVectorize && DstHasDirectAccess
      |                          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h: In instantiation of ‘struct Eigen::internal::assign_traits<Eigen::SelfCwiseBinaryOp<Eigen::internal::scalar_sum_op<float>, Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> > >’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/SelfCwiseBinaryOp.h:137:64:   required from ‘Eigen::SelfCwiseBinaryOp<BinOp, Lhs, Rhs>& Eigen::SelfCwiseBinaryOp<BinOp, Lhs, Rhs>::lazyAssign(const Eigen::DenseBase<OtherDerived>&) [with RhsDerived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> >; BinaryOp = Eigen::internal::scalar_sum_op<float>; Lhs = Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, true, true>; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> >]’
  137 |       internal::assign_impl<SelfCwiseBinaryOp, RhsDerived>::run(*this,rhs.derived());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:522:107:   required from ‘static Derived& Eigen::internal::assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::SelfCwiseBinaryOp<Eigen::internal::scalar_sum_op<float>, Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> > >; OtherDerived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> >]’
  522 |   static EIGEN_STRONG_INLINE Derived& run(Derived& dst, const OtherDerived& other) { return dst.lazyAssign(other.derived()); }
      |                                                                                             ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:562:62:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> >; Derived = Eigen::SelfCwiseBinaryOp<Eigen::internal::scalar_sum_op<float>, Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> > >]’
  562 |   return internal::assign_selector<Derived,OtherDerived>::run(derived(), other.derived());
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/SelfCwiseBinaryOp.h:150:29:   required from ‘Eigen::SelfCwiseBinaryOp<BinOp, Lhs, Rhs>& Eigen::SelfCwiseBinaryOp<BinOp, Lhs, Rhs>::operator=(const Rhs&) [with BinaryOp = Eigen::internal::scalar_sum_op<float>; Lhs = Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, true, true>; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> >]’
  150 |       return Base::operator=(rhs);
      |              ~~~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/CwiseBinaryOp.h:223:7:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator+=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> >; Derived = Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, true, true>]’
  223 |   tmp = other.derived();
      |   ~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:59:7:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
   59 |     x += alpha * p;                       // update solution
      |     ~~^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/misc/Solve.h:51:74:   required from ‘void Eigen::internal::solve_retval_base<DecompositionType, Rhs>::evalTo(Dest&) const [with Dest = Eigen::Matrix<float, -1, 1>; _DecompositionType = Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >; Rhs = Eigen::Matrix<float, -1, 1>]’
   51 |     static_cast<const solve_retval<DecompositionType,Rhs>*>(this)->evalTo(dst);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/ReturnByValue.h:61:48:   required from ‘void Eigen::ReturnByValue<Derived>::evalTo(Dest&) const [with Dest = Eigen::Matrix<float, -1, 1>; Derived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >]’
   61 |     { static_cast<const Derived*>(this)->evalTo(dst); }
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:577:15:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  577 |   other.evalTo(derived());
      |   ~~~~~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/PlainObjectBase.h:400:29:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  400 |       return Base::operator=(func);
      |              ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Matrix.h:190:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; _Scalar = float; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
  190 |       return Base::operator=(func);
      |              ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp:176:19:   required from here
  176 |     x = cg.solve(b);
      |                   ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:51:48: warning: enum constant in boolean context [-Wint-in-bool-context]
   51 |                        && int(DstIsAligned) && int(SrcIsAligned),
      |                                                ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:53:57: warning: enum constant in boolean context [-Wint-in-bool-context]
   53 |     MayLinearVectorize = MightVectorize && MayLinearize && DstHasDirectAccess
      |                          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:57:41: warning: enum constant in boolean context [-Wint-in-bool-context]
   57 |     MaySliceVectorize  = MightVectorize && DstHasDirectAccess
      |                          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h: In instantiation of ‘struct Eigen::internal::assign_traits<Eigen::SelfCwiseBinaryOp<Eigen::internal::scalar_difference_op<float>, Eigen::Matrix<float, -1, 1>, Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> > >’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/SelfCwiseBinaryOp.h:137:64:   required from ‘Eigen::SelfCwiseBinaryOp<BinOp, Lhs, Rhs>& Eigen::SelfCwiseBinaryOp<BinOp, Lhs, Rhs>::lazyAssign(const Eigen::DenseBase<OtherDerived>&) [with RhsDerived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> >; BinaryOp = Eigen::internal::scalar_difference_op<float>; Lhs = Eigen::Matrix<float, -1, 1>; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> >]’
  137 |       internal::assign_impl<SelfCwiseBinaryOp, RhsDerived>::run(*this,rhs.derived());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:522:107:   required from ‘static Derived& Eigen::internal::assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::SelfCwiseBinaryOp<Eigen::internal::scalar_difference_op<float>, Eigen::Matrix<float, -1, 1>, Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> > >; OtherDerived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> >]’
  522 |   static EIGEN_STRONG_INLINE Derived& run(Derived& dst, const OtherDerived& other) { return dst.lazyAssign(other.derived()); }
      |                                                                                             ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:562:62:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> >; Derived = Eigen::SelfCwiseBinaryOp<Eigen::internal::scalar_difference_op<float>, Eigen::Matrix<float, -1, 1>, Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> > >]’
  562 |   return internal::assign_selector<Derived,OtherDerived>::run(derived(), other.derived());
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/SelfCwiseBinaryOp.h:150:29:   required from ‘Eigen::SelfCwiseBinaryOp<BinOp, Lhs, Rhs>& Eigen::SelfCwiseBinaryOp<BinOp, Lhs, Rhs>::operator=(const Rhs&) [with BinaryOp = Eigen::internal::scalar_difference_op<float>; Lhs = Eigen::Matrix<float, -1, 1>; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> >]’
  150 |       return Base::operator=(rhs);
      |              ~~~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/CwiseBinaryOp.h:209:7:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator-=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  209 |   tmp = other.derived();
      |   ~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h:60:14:   [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
   60 |     residual -= alpha * tmp;              // update residue
      |     ~~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/misc/Solve.h:51:74:   required from ‘void Eigen::internal::solve_retval_base<DecompositionType, Rhs>::evalTo(Dest&) const [with Dest = Eigen::Matrix<float, -1, 1>; _DecompositionType = Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >; Rhs = Eigen::Matrix<float, -1, 1>]’
   51 |     static_cast<const solve_retval<DecompositionType,Rhs>*>(this)->evalTo(dst);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/ReturnByValue.h:61:48:   required from ‘void Eigen::ReturnByValue<Derived>::evalTo(Dest&) const [with Dest = Eigen::Matrix<float, -1, 1>; Derived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >]’
   61 |     { static_cast<const Derived*>(this)->evalTo(dst); }
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:577:15:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  577 |   other.evalTo(derived());
      |   ~~~~~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/PlainObjectBase.h:400:29:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  400 |       return Base::operator=(func);
      |              ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Matrix.h:190:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; _Scalar = float; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
  190 |       return Base::operator=(func);
      |              ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp:176:19:   required from here
  176 |     x = cg.solve(b);
      |                   ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:51:27: warning: enum constant in boolean context [-Wint-in-bool-context]
   51 |                        && int(DstIsAligned) && int(SrcIsAligned),
      |                           ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:51:48: warning: enum constant in boolean context [-Wint-in-bool-context]
   51 |                        && int(DstIsAligned) && int(SrcIsAligned),
      |                                                ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:53:57: warning: enum constant in boolean context [-Wint-in-bool-context]
   53 |     MayLinearVectorize = MightVectorize && MayLinearize && DstHasDirectAccess
      |                          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:54:41: warning: enum constant in boolean context [-Wint-in-bool-context]
   54 |                        && (DstIsAligned || MaxSizeAtCompileTime == Dynamic),
      |                           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:57:41: warning: enum constant in boolean context [-Wint-in-bool-context]
   57 |     MaySliceVectorize  = MightVectorize && DstHasDirectAccess
      |                          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h: In instantiation of ‘struct Eigen::internal::assign_traits<Eigen::Matrix<float, -1, 1>, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Matrix<float, -1, 1> > >’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:499:116:   required from ‘Derived& Eigen::DenseBase<Derived>::lazyAssign(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Matrix<float, -1, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  499 |   internal::assign_impl<Derived, OtherDerived, int(SameType) ? int(internal::assign_traits<Derived, OtherDerived>::Traversal)
      |                                                                                                                    ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/PlainObjectBase.h:393:30:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::lazyAssign(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Matrix<float, -1, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  393 |       return Base::lazyAssign(other.derived());
      |              ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:522:107:   required from ‘static Derived& Eigen::internal::assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<float, -1, 1>; OtherDerived = Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Matrix<float, -1, 1> >]’
  522 |   static EIGEN_STRONG_INLINE Derived& run(Derived& dst, const OtherDerived& other) { return dst.lazyAssign(other.derived()); }
      |                                                                                             ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/PlainObjectBase.h:599:72:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Matrix<float, -1, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  599 |       return internal::assign_selector<Derived,OtherDerived,false>::run(this->derived(), other.derived());
      |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/PlainObjectBase.h:584:114:   required from ‘void Eigen::PlainObjectBase<Derived>::_set_selector(const OtherDerived&, const Eigen::internal::false_type&) [with OtherDerived = Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<float>, Eigen::Matrix<float, -1, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  584 |     EIGEN_STRONG_INLINE void _set_selector(const OtherDerived& other, const internal::false_type&) { _set_noalias(other); }
      |                                                                                                      ~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/PlainObjectBase.h:576:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
  576 |       _set_selector(other.derived(), typename internal::conditional<static_cast<bool>(int(OtherDerived::Flags) & EvalBeforeAssigningBit), internal::true_type, internal::false_type>::type());
      |       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/misc/Solve.h:51:74:   required from ‘void Eigen::internal::solve_retval_base<DecompositionType, Rhs>::evalTo(Dest&) const [with Dest = Eigen::Matrix<float, -1, 1>; _DecompositionType = Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >; Rhs = Eigen::Matrix<float, -1, 1>]’
   51 |     static_cast<const solve_retval<DecompositionType,Rhs>*>(this)->evalTo(dst);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/ReturnByValue.h:61:48:   required from ‘void Eigen::ReturnByValue<Derived>::evalTo(Dest&) const [with Dest = Eigen::Matrix<float, -1, 1>; Derived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >]’
   61 |     { static_cast<const Derived*>(this)->evalTo(dst); }
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:577:15:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  577 |   other.evalTo(derived());
      |   ~~~~~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/PlainObjectBase.h:400:29:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  400 |       return Base::operator=(func);
      |              ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Matrix.h:190:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; _Scalar = float; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
  190 |       return Base::operator=(func);
      |              ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp:176:19:   required from here
  176 |     x = cg.solve(b);
      |                   ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:51:27: warning: enum constant in boolean context [-Wint-in-bool-context]
   51 |                        && int(DstIsAligned) && int(SrcIsAligned),
      |                           ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:53:57: warning: enum constant in boolean context [-Wint-in-bool-context]
   53 |     MayLinearVectorize = MightVectorize && MayLinearize && DstHasDirectAccess
      |                          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:54:41: warning: enum constant in boolean context [-Wint-in-bool-context]
   54 |                        && (DstIsAligned || MaxSizeAtCompileTime == Dynamic),
      |                           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:57:41: warning: enum constant in boolean context [-Wint-in-bool-context]
   57 |     MaySliceVectorize  = MightVectorize && DstHasDirectAccess
      |                          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h: In instantiation of ‘struct Eigen::internal::assign_traits<Eigen::Matrix<float, -1, 1>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float>, const Eigen::Matrix<float, -1, 1>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> > > >’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:499:116:   required from ‘Derived& Eigen::DenseBase<Derived>::lazyAssign(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float>, const Eigen::Matrix<float, -1, 1>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> > >; Derived = Eigen::Matrix<float, -1, 1>]’
  499 |   internal::assign_impl<Derived, OtherDerived, int(SameType) ? int(internal::assign_traits<Derived, OtherDerived>::Traversal)
      |                                                                                                                    ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/PlainObjectBase.h:393:30:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::lazyAssign(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float>, const Eigen::Matrix<float, -1, 1>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> > >; Derived = Eigen::Matrix<float, -1, 1>]’
  393 |       return Base::lazyAssign(other.derived());
      |              ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:522:107:   required from ‘static Derived& Eigen::internal::assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<float, -1, 1>; OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float>, const Eigen::Matrix<float, -1, 1>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> > >]’
  522 |   static EIGEN_STRONG_INLINE Derived& run(Derived& dst, const OtherDerived& other) { return dst.lazyAssign(other.derived()); }
      |                                                                                             ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/PlainObjectBase.h:599:72:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float>, const Eigen::Matrix<float, -1, 1>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> > >; Derived = Eigen::Matrix<float, -1, 1>]’
  599 |       return internal::assign_selector<Derived,OtherDerived,false>::run(this->derived(), other.derived());
      |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/PlainObjectBase.h:584:114:   required from ‘void Eigen::PlainObjectBase<Derived>::_set_selector(const OtherDerived&, const Eigen::internal::false_type&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_sum_op<float>, const Eigen::Matrix<float, -1, 1>, const Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Matrix<float, -1, 1> > >; Derived = Eigen::Matrix<float, -1, 1>]’
  584 |     EIGEN_STRONG_INLINE void _set_selector(const OtherDerived& other, const internal::false_type&) { _set_noalias(other); }
      |                                                                                                      ~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/PlainObjectBase.h:576:20:   [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
  576 |       _set_selector(other.derived(), typename internal::conditional<static_cast<bool>(int(OtherDerived::Flags) & EvalBeforeAssigningBit), internal::true_type, internal::false_type>::type());
      |       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/misc/Solve.h:51:74:   required from ‘void Eigen::internal::solve_retval_base<DecompositionType, Rhs>::evalTo(Dest&) const [with Dest = Eigen::Matrix<float, -1, 1>; _DecompositionType = Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >; Rhs = Eigen::Matrix<float, -1, 1>]’
   51 |     static_cast<const solve_retval<DecompositionType,Rhs>*>(this)->evalTo(dst);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/ReturnByValue.h:61:48:   required from ‘void Eigen::ReturnByValue<Derived>::evalTo(Dest&) const [with Dest = Eigen::Matrix<float, -1, 1>; Derived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >]’
   61 |     { static_cast<const Derived*>(this)->evalTo(dst); }
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:577:15:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  577 |   other.evalTo(derived());
      |   ~~~~~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/PlainObjectBase.h:400:29:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  400 |       return Base::operator=(func);
      |              ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Matrix.h:190:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; _Scalar = float; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
  190 |       return Base::operator=(func);
      |              ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp:176:19:   required from here
  176 |     x = cg.solve(b);
      |                   ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:51:27: warning: enum constant in boolean context [-Wint-in-bool-context]
   51 |                        && int(DstIsAligned) && int(SrcIsAligned),
      |                           ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:51:48: warning: enum constant in boolean context [-Wint-in-bool-context]
   51 |                        && int(DstIsAligned) && int(SrcIsAligned),
      |                                                ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:53:57: warning: enum constant in boolean context [-Wint-in-bool-context]
   53 |     MayLinearVectorize = MightVectorize && MayLinearize && DstHasDirectAccess
      |                          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:54:41: warning: enum constant in boolean context [-Wint-in-bool-context]
   54 |                        && (DstIsAligned || MaxSizeAtCompileTime == Dynamic),
      |                           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:57:41: warning: enum constant in boolean context [-Wint-in-bool-context]
   57 |     MaySliceVectorize  = MightVectorize && DstHasDirectAccess
      |                          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h: In instantiation of ‘struct Eigen::internal::assign_traits<Eigen::SelfCwiseBinaryOp<Eigen::internal::scalar_sum_op<float>, Eigen::Block<Eigen::Matrix<float, -1, 1>, 1, 1, false, true>, Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Block<const Eigen::Matrix<float, -1, 1>, 1, 1, false, true> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Block<const Eigen::Matrix<float, -1, 1>, 1, 1, false, true> > >’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/SelfCwiseBinaryOp.h:137:64:   required from ‘Eigen::SelfCwiseBinaryOp<BinOp, Lhs, Rhs>& Eigen::SelfCwiseBinaryOp<BinOp, Lhs, Rhs>::lazyAssign(const Eigen::DenseBase<OtherDerived>&) [with RhsDerived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Block<const Eigen::Matrix<float, -1, 1>, 1, 1, false, true> >; BinaryOp = Eigen::internal::scalar_sum_op<float>; Lhs = Eigen::Block<Eigen::Matrix<float, -1, 1>, 1, 1, false, true>; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Block<const Eigen::Matrix<float, -1, 1>, 1, 1, false, true> >]’
  137 |       internal::assign_impl<SelfCwiseBinaryOp, RhsDerived>::run(*this,rhs.derived());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:522:107:   required from ‘static Derived& Eigen::internal::assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::SelfCwiseBinaryOp<Eigen::internal::scalar_sum_op<float>, Eigen::Block<Eigen::Matrix<float, -1, 1>, 1, 1, false, true>, Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Block<const Eigen::Matrix<float, -1, 1>, 1, 1, false, true> > >; OtherDerived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Block<const Eigen::Matrix<float, -1, 1>, 1, 1, false, true> >]’
  522 |   static EIGEN_STRONG_INLINE Derived& run(Derived& dst, const OtherDerived& other) { return dst.lazyAssign(other.derived()); }
      |                                                                                             ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:562:62:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Block<const Eigen::Matrix<float, -1, 1>, 1, 1, false, true> >; Derived = Eigen::SelfCwiseBinaryOp<Eigen::internal::scalar_sum_op<float>, Eigen::Block<Eigen::Matrix<float, -1, 1>, 1, 1, false, true>, Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Block<const Eigen::Matrix<float, -1, 1>, 1, 1, false, true> > >]’
  562 |   return internal::assign_selector<Derived,OtherDerived>::run(derived(), other.derived());
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/SelfCwiseBinaryOp.h:150:29:   required from ‘Eigen::SelfCwiseBinaryOp<BinOp, Lhs, Rhs>& Eigen::SelfCwiseBinaryOp<BinOp, Lhs, Rhs>::operator=(const Rhs&) [with BinaryOp = Eigen::internal::scalar_sum_op<float>; Lhs = Eigen::Block<Eigen::Matrix<float, -1, 1>, 1, 1, false, true>; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Block<const Eigen::Matrix<float, -1, 1>, 1, 1, false, true> >]’
  150 |       return Base::operator=(rhs);
      |              ~~~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/CwiseBinaryOp.h:223:7:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator+=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Block<const Eigen::Matrix<float, -1, 1>, 1, 1, false, true> >; Derived = Eigen::Block<Eigen::Matrix<float, -1, 1>, 1, 1, false, true>]’
  223 |   tmp = other.derived();
      |   ~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h:233:25:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
  233 |             dest.row(j) += i.value() * m_rhs.row(j);
      |             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/misc/Solve.h:51:74:   required from ‘void Eigen::internal::solve_retval_base<DecompositionType, Rhs>::evalTo(Dest&) const [with Dest = Eigen::Matrix<float, -1, 1>; _DecompositionType = Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >; Rhs = Eigen::Matrix<float, -1, 1>]’
   51 |     static_cast<const solve_retval<DecompositionType,Rhs>*>(this)->evalTo(dst);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/ReturnByValue.h:61:48:   required from ‘void Eigen::ReturnByValue<Derived>::evalTo(Dest&) const [with Dest = Eigen::Matrix<float, -1, 1>; Derived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >]’
   61 |     { static_cast<const Derived*>(this)->evalTo(dst); }
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:577:15:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  577 |   other.evalTo(derived());
      |   ~~~~~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/PlainObjectBase.h:400:29:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  400 |       return Base::operator=(func);
      |              ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Matrix.h:190:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; _Scalar = float; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
  190 |       return Base::operator=(func);
      |              ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp:176:19:   required from here
  176 |     x = cg.solve(b);
      |                   ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:53:57: warning: enum constant in boolean context [-Wint-in-bool-context]
   53 |     MayLinearVectorize = MightVectorize && MayLinearize && DstHasDirectAccess
      |                          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:57:41: warning: enum constant in boolean context [-Wint-in-bool-context]
   57 |     MaySliceVectorize  = MightVectorize && DstHasDirectAccess
      |                          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h: In instantiation of ‘struct Eigen::internal::assign_traits<Eigen::Matrix<float, -1, 1>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<const Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<const Eigen::Matrix<float, -1, 1> > > >’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:499:116:   required from ‘Derived& Eigen::DenseBase<Derived>::lazyAssign(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<const Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<const Eigen::Matrix<float, -1, 1> > >; Derived = Eigen::Matrix<float, -1, 1>]’
  499 |   internal::assign_impl<Derived, OtherDerived, int(SameType) ? int(internal::assign_traits<Derived, OtherDerived>::Traversal)
      |                                                                                                                    ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/PlainObjectBase.h:393:30:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::lazyAssign(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<const Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<const Eigen::Matrix<float, -1, 1> > >; Derived = Eigen::Matrix<float, -1, 1>]’
  393 |       return Base::lazyAssign(other.derived());
      |              ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:522:107:   required from ‘static Derived& Eigen::internal::assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::Matrix<float, -1, 1>; OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<const Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<const Eigen::Matrix<float, -1, 1> > >]’
  522 |   static EIGEN_STRONG_INLINE Derived& run(Derived& dst, const OtherDerived& other) { return dst.lazyAssign(other.derived()); }
      |                                                                                             ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:562:62:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<const Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<const Eigen::Matrix<float, -1, 1> > >; Derived = Eigen::Matrix<float, -1, 1>]’
  562 |   return internal::assign_selector<Derived,OtherDerived>::run(derived(), other.derived());
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/PlainObjectBase.h:432:22:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::operator=(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<float, float>, const Eigen::ArrayWrapper<const Eigen::Matrix<float, -1, 1> >, const Eigen::ArrayWrapper<const Eigen::Matrix<float, -1, 1> > >; Derived = Eigen::Matrix<float, -1, 1>]’
  432 |       Base::operator=(other.derived());
      |       ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Matrix.h:184:29:   [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
  184 |       return Base::operator=(other);
      |              ~~~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/misc/Solve.h:51:74:   required from ‘void Eigen::internal::solve_retval_base<DecompositionType, Rhs>::evalTo(Dest&) const [with Dest = Eigen::Matrix<float, -1, 1>; _DecompositionType = Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >; Rhs = Eigen::Matrix<float, -1, 1>]’
   51 |     static_cast<const solve_retval<DecompositionType,Rhs>*>(this)->evalTo(dst);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/ReturnByValue.h:61:48:   required from ‘void Eigen::ReturnByValue<Derived>::evalTo(Dest&) const [with Dest = Eigen::Matrix<float, -1, 1>; Derived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >]’
   61 |     { static_cast<const Derived*>(this)->evalTo(dst); }
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:577:15:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  577 |   other.evalTo(derived());
      |   ~~~~~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/PlainObjectBase.h:400:29:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  400 |       return Base::operator=(func);
      |              ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Matrix.h:190:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; _Scalar = float; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
  190 |       return Base::operator=(func);
      |              ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp:176:19:   required from here
  176 |     x = cg.solve(b);
      |                   ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:51:27: warning: enum constant in boolean context [-Wint-in-bool-context]
   51 |                        && int(DstIsAligned) && int(SrcIsAligned),
      |                           ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:51:48: warning: enum constant in boolean context [-Wint-in-bool-context]
   51 |                        && int(DstIsAligned) && int(SrcIsAligned),
      |                                                ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:53:57: warning: enum constant in boolean context [-Wint-in-bool-context]
   53 |     MayLinearVectorize = MightVectorize && MayLinearize && DstHasDirectAccess
      |                          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:54:41: warning: enum constant in boolean context [-Wint-in-bool-context]
   54 |                        && (DstIsAligned || MaxSizeAtCompileTime == Dynamic),
      |                           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:57:41: warning: enum constant in boolean context [-Wint-in-bool-context]
   57 |     MaySliceVectorize  = MightVectorize && DstHasDirectAccess
      |                          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h: In instantiation of ‘struct Eigen::internal::assign_traits<Eigen::SelfCwiseBinaryOp<Eigen::internal::scalar_sum_op<float>, Eigen::Block<Eigen::Matrix<float, -1, 1>, 1, 1, false, true>, Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Block<const Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, 1, 1, false, true> > >, Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Block<const Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, 1, 1, false, true> > >’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/SelfCwiseBinaryOp.h:137:64:   required from ‘Eigen::SelfCwiseBinaryOp<BinOp, Lhs, Rhs>& Eigen::SelfCwiseBinaryOp<BinOp, Lhs, Rhs>::lazyAssign(const Eigen::DenseBase<OtherDerived>&) [with RhsDerived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Block<const Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, 1, 1, false, true> >; BinaryOp = Eigen::internal::scalar_sum_op<float>; Lhs = Eigen::Block<Eigen::Matrix<float, -1, 1>, 1, 1, false, true>; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Block<const Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, 1, 1, false, true> >]’
  137 |       internal::assign_impl<SelfCwiseBinaryOp, RhsDerived>::run(*this,rhs.derived());
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:522:107:   required from ‘static Derived& Eigen::internal::assign_selector<Derived, OtherDerived, false, false>::run(Derived&, const OtherDerived&) [with Derived = Eigen::SelfCwiseBinaryOp<Eigen::internal::scalar_sum_op<float>, Eigen::Block<Eigen::Matrix<float, -1, 1>, 1, 1, false, true>, Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Block<const Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, 1, 1, false, true> > >; OtherDerived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Block<const Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, 1, 1, false, true> >]’
  522 |   static EIGEN_STRONG_INLINE Derived& run(Derived& dst, const OtherDerived& other) { return dst.lazyAssign(other.derived()); }
      |                                                                                             ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:562:62:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Block<const Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, 1, 1, false, true> >; Derived = Eigen::SelfCwiseBinaryOp<Eigen::internal::scalar_sum_op<float>, Eigen::Block<Eigen::Matrix<float, -1, 1>, 1, 1, false, true>, Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Block<const Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, 1, 1, false, true> > >]’
  562 |   return internal::assign_selector<Derived,OtherDerived>::run(derived(), other.derived());
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/SelfCwiseBinaryOp.h:150:29:   required from ‘Eigen::SelfCwiseBinaryOp<BinOp, Lhs, Rhs>& Eigen::SelfCwiseBinaryOp<BinOp, Lhs, Rhs>::operator=(const Rhs&) [with BinaryOp = Eigen::internal::scalar_sum_op<float>; Lhs = Eigen::Block<Eigen::Matrix<float, -1, 1>, 1, 1, false, true>; Rhs = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Block<const Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, 1, 1, false, true> >]’
  150 |       return Base::operator=(rhs);
      |              ~~~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/CwiseBinaryOp.h:223:7:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator+=(const Eigen::MatrixBase<OtherDerived>&) [with OtherDerived = Eigen::CwiseUnaryOp<Eigen::internal::scalar_multiple_op<float>, const Eigen::Block<const Eigen::Block<Eigen::Matrix<float, -1, 1>, -1, 1, true, true>, 1, 1, false, true> >; Derived = Eigen::Block<Eigen::Matrix<float, -1, 1>, 1, 1, false, true>]’
  223 |   tmp = other.derived();
      |   ~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h:233:25:   [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
  233 |             dest.row(j) += i.value() * m_rhs.row(j);
      |             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/misc/Solve.h:51:74:   required from ‘void Eigen::internal::solve_retval_base<DecompositionType, Rhs>::evalTo(Dest&) const [with Dest = Eigen::Matrix<float, -1, 1>; _DecompositionType = Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >; Rhs = Eigen::Matrix<float, -1, 1>]’
   51 |     static_cast<const solve_retval<DecompositionType,Rhs>*>(this)->evalTo(dst);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/ReturnByValue.h:61:48:   required from ‘void Eigen::ReturnByValue<Derived>::evalTo(Dest&) const [with Dest = Eigen::Matrix<float, -1, 1>; Derived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >]’
   61 |     { static_cast<const Derived*>(this)->evalTo(dst); }
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:577:15:   required from ‘Derived& Eigen::MatrixBase<Derived>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  577 |   other.evalTo(derived());
      |   ~~~~~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/PlainObjectBase.h:400:29:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; Derived = Eigen::Matrix<float, -1, 1>]’
  400 |       return Base::operator=(func);
      |              ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Matrix.h:190:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::ReturnByValue<OtherDerived>&) [with OtherDerived = Eigen::internal::solve_retval_base<Eigen::ConjugateGradient<Eigen::SparseMatrix<float, 1> >, Eigen::Matrix<float, -1, 1> >; _Scalar = float; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’
  190 |       return Base::operator=(func);
      |              ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.cpp:176:19:   required from here
  176 |     x = cg.solve(b);
      |                   ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:53:57: warning: enum constant in boolean context [-Wint-in-bool-context]
   53 |     MayLinearVectorize = MightVectorize && MayLinearize && DstHasDirectAccess
      |                          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Assign.h:57:41: warning: enum constant in boolean context [-Wint-in-bool-context]
   57 |     MaySliceVectorize  = MightVectorize && DstHasDirectAccess
      |                          ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘CompuCell3D::Array3DContiguous<T>::Array3DContiguous(CompuCell3D::Dim3D&, T&) [with T = float]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusableVectorCommon.h:77:52:   required from ‘void CompuCell3D::DiffusableVectorCommon<precision, Array_Type>::allocateDiffusableFieldVector(unsigned int, CompuCell3D::Dim3D) [with precision = float; Array_Type = CompuCell3D::Array3DContiguous]’
   77 |                 concentrationFieldVector.push_back(new Array_t(fieldDim, val));
      |                                                    ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusableVectorCommon.h:69:22:   required from here
   69 |         virtual void allocateDiffusableFieldVector(unsigned int numberOfFields, Dim3D fieldDim) {
      |                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:844:13: warning: ‘CompuCell3D::Array3DContiguous<float>::shiftArray’ will be initialized after [-Wreorder]
  844 |         int shiftArray;
      |             ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:843:13: warning:   ‘int CompuCell3D::Array3DContiguous<float>::shiftSwap’ [-Wreorder]
  843 |         int shiftSwap;
      |             ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:742:9: warning:   when initialized here [-Wreorder]
  742 |         Array3DContiguous(Dim3D &_dim, T &_initVal = T()) :
      |         ^~~~~~~~~~~~~~~~~
[190/395] /usr/bin/g++ -DPDESolversShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/DiffusionSolverFE.cpp.o -MF core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/DiffusionSolverFE.cpp.o.d -o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/DiffusionSolverFE.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusableVectorCommon.h:10,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.h:9:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PixelTracker/PixelTrackerPlugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.h:27,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.h:12:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Steppable.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.h:5:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Core:248,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/SparseCore:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Sparse:17,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp:19:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/util/Memory.h: In function ‘Index Eigen::internal::first_aligned(const Scalar*, Index)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/util/Memory.h:449:48: warning: typedef ‘Packet’ locally defined but not used [-Wunused-local-typedefs]
  449 |   typedef typename packet_traits<Scalar>::type Packet;
      |                                                ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Core:268:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Functors.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Functors.h:936:28: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  936 | struct functor_traits<std::binder2nd<T> >
      |                            ^~~~~~~~~
In file included from /usr/include/c++/16/bits/stl_function.h:1594:
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Functors.h:940:28: warning: ‘template<class _Operation> class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  940 | struct functor_traits<std::binder1st<T> >
      |                            ^~~~~~~~~
/usr/include/c++/16/backward/binders.h:108:11: note: declared here
  108 |     class binder1st
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Functors.h:944:28: warning: ‘template<class _Predicate> class std::unary_negate’ is deprecated [-Wdeprecated-declarations]
  944 | struct functor_traits<std::unary_negate<T> >
      |                            ^~~~~~~~~~~~
/usr/include/c++/16/bits/stl_function.h:1112:33: note: declared here
 1112 |     class _GLIBCXX17_DEPRECATED unary_negate
      |                                 ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Functors.h:948:28: warning: ‘template<class _Predicate> class std::binary_negate’ is deprecated [-Wdeprecated-declarations]
  948 | struct functor_traits<std::binary_negate<T> >
      |                            ^~~~~~~~~~~~~
/usr/include/c++/16/bits/stl_function.h:1139:33: note: declared here
 1139 |     class _GLIBCXX17_DEPRECATED binary_negate
      |                                 ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/MatrixBase.h:138,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Core:271:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/MatrixCwiseUnaryOps.h:62:32: warning: ‘template<class _Operation> class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
   62 | inline const CwiseUnaryOp<std::binder1st<std::equal_to<Scalar> >, const Derived>
      |                                ^~~~~~~~~
/usr/include/c++/16/backward/binders.h:108:11: note: declared here
  108 |     class binder1st
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/MatrixCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder1st<std::equal_to<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::MatrixBase<Derived>::cwiseEqual(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/MatrixCwiseUnaryOps.h:65:28: warning: ‘template<class _Operation> class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
   65 |   return CwiseUnaryOp<std::binder1st<std::equal_to<Scalar> >,const Derived>
      |                            ^~~~~~~~~
/usr/include/c++/16/backward/binders.h:108:11: note: declared here
  108 |     class binder1st
      |           ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Core:317:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In member function ‘void Eigen::internal::gebp_kernel<LhsScalar, RhsScalar, Index, mr, nr, ConjugateLhs, ConjugateRhs>::operator()(ResScalar*, Index, const LhsScalar*, const RhsScalar*, Index, Index, Index, ResScalar, Index, Index, Index, Index, RhsScalar*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h:567:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
  567 |         if(nr==4) traits.initAcc(C3);
      |         ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h:568:19: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
  568 |                   traits.initAcc(C4);
      |                   ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h:939:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
  939 |         if(nr==4) R3 = ploadu<ResPacket>(r3);
      |         ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h:941:19: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
  941 |                   traits.acc(C0, alphav, R0);
      |                   ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h:944:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
  944 |         if(nr==4) traits.acc(C3, alphav, R3);
      |         ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h:946:19: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
  946 |                   pstoreu(r0, R0);
      |                   ^~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Core:324:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h: In static member function ‘static void Eigen::internal::selfadjoint_matrix_vector_product<Scalar, Index, StorageOrder, UpLo, ConjugateLhs, ConjugateRhs, Version>::run(Index, const Scalar*, Index, const Scalar*, Index, Scalar*, Scalar)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h:74:43: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
   74 |     register const Scalar* EIGEN_RESTRICT A0 = lhs + j*lhsStride;
      |                                           ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h:75:43: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
   75 |     register const Scalar* EIGEN_RESTRICT A1 = lhs + (j+1)*lhsStride;
      |                                           ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h:142:43: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
  142 |     register const Scalar* EIGEN_RESTRICT A0 = lhs + j*lhsStride;
      |                                           ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h:38:44: warning: typedef ‘RealScalar’ locally defined but not used [-Wunused-local-typedefs]
   38 |   typedef typename NumTraits<Scalar>::Real RealScalar;
      |                                            ^~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/ArrayBase.h:108,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Core:340:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/MatrixCwiseUnaryOps.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/MatrixCwiseUnaryOps.h:62:32: warning: ‘template<class _Operation> class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
   62 | inline const CwiseUnaryOp<std::binder1st<std::equal_to<Scalar> >, const Derived>
      |                                ^~~~~~~~~
/usr/include/c++/16/backward/binders.h:108:11: note: declared here
  108 |     class binder1st
      |           ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/ArrayBase.h:109:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:190:34: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  190 |   inline const CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                                  ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:196:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  196 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator==,  std::equal_to)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:190:34: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  190 |   inline const CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                                  ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:197:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  197 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator!=,  std::not_equal_to)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:190:34: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  190 |   inline const CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                                  ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:198:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  198 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator<,   std::less)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:190:34: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  190 |   inline const CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                                  ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:199:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  199 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator<=,  std::less_equal)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:190:34: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  190 |   inline const CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                                  ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:200:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  200 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator>,   std::greater)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:190:34: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  190 |   inline const CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                                  ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:201:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  201 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator>=,  std::greater_equal)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/MatrixCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder1st<std::equal_to<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::ArrayBase<Derived>::cwiseEqual(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/MatrixCwiseUnaryOps.h:65:28: warning: ‘template<class _Operation> class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
   65 |   return CwiseUnaryOp<std::binder1st<std::equal_to<Scalar> >,const Derived>
      |                            ^~~~~~~~~
/usr/include/c++/16/backward/binders.h:108:11: note: declared here
  108 |     class binder1st
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder2nd<std::equal_to<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::ArrayBase<Derived>::operator==(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:192:30: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  192 |     return CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                              ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:196:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  196 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator==,  std::equal_to)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder2nd<std::not_equal_to<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::ArrayBase<Derived>::operator!=(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:192:30: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  192 |     return CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                              ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:197:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  197 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator!=,  std::not_equal_to)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder2nd<std::less<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::ArrayBase<Derived>::operator<(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:192:30: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  192 |     return CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                              ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:198:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  198 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator<,   std::less)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder2nd<std::less_equal<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::ArrayBase<Derived>::operator<=(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:192:30: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  192 |     return CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                              ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:199:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  199 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator<=,  std::less_equal)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder2nd<std::greater<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::ArrayBase<Derived>::operator>(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:192:30: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  192 |     return CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                              ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:200:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  200 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator>,   std::greater)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder2nd<std::greater_equal<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::ArrayBase<Derived>::operator>=(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:192:30: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  192 |     return CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                              ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:201:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  201 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator>=,  std::greater_equal)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/SparseMatrixBase.h:137,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/SparseCore:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/../plugins/MatrixCwiseUnaryOps.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/../plugins/MatrixCwiseUnaryOps.h:62:32: warning: ‘template<class _Operation> class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
   62 | inline const CwiseUnaryOp<std::binder1st<std::equal_to<Scalar> >, const Derived>
      |                                ^~~~~~~~~
/usr/include/c++/16/backward/binders.h:108:11: note: declared here
  108 |     class binder1st
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/../plugins/MatrixCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder1st<std::equal_to<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::SparseMatrixBase<Derived>::cwiseEqual(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/../plugins/MatrixCwiseUnaryOps.h:65:28: warning: ‘template<class _Operation> class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
   65 |   return CwiseUnaryOp<std::binder1st<std::equal_to<Scalar> >,const Derived>
      |                            ^~~~~~~~~
/usr/include/c++/16/backward/binders.h:108:11: note: declared here
  108 |     class binder1st
      |           ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/SparseCore:40:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/SparseMatrix.h: In function ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/SparseMatrix.h:1006:44: warning: typedef ‘Index’ locally defined but not used [-Wunused-local-typedefs]
 1006 |   typedef typename SparseMatrixType::Index Index;
      |                                            ^~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/SparseCore:59:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h: In member function ‘void Eigen::SparseSelfAdjointTimeDenseProduct<Lhs, Rhs, UpLo>::scaleAndAddTo(Dest&, Scalar) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h:215:56: warning: typedef ‘_Rhs’ locally defined but not used [-Wunused-local-typedefs]
  215 |       typedef typename internal::remove_all<Rhs>::type _Rhs;
      |                                                        ^~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/OrderingMethods:19,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Sparse:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/OrderingMethods/Amd.h: In function ‘void Eigen::internal::minimum_degree_ordering(Eigen::SparseMatrix<Scalar, 0, Index>&, Eigen::PermutationMatrix<-1, -1, Index>&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/OrderingMethods/Amd.h:97:47: warning: typedef ‘CCS’ locally defined but not used [-Wunused-local-typedefs]
   97 |   typedef SparseMatrix<Scalar,ColMajor,Index> CCS;
      |                                               ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.h:282:22: warning: ‘void CompuCell3D::DiffusionSolverFE<Cruncher>::Scale(const std::vector<float>&, float, const std::vector<float>&) [with Cruncher = CompuCell3D::DiffusionSolverFE_CPU_Implicit]’ was hidden [-Woverloaded-virtual=]
  282 |         virtual void Scale(std::vector<float> const &maxDiffConstVec, float maxStableDiffConstant,
      |                      ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.h:34:22: note:   by ‘virtual void CompuCell3D::DiffusionSolverFE_CPU_Implicit::Scale(const std::vector<float>&, float)’
   34 |         virtual void Scale(std::vector<float> const &maxDiffConstVec, float maxStableDiffConstant);
      |                      ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<signed char>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:952:11:   required from ‘class CompuCell3D::Array3DCUDA<signed char>’
  952 |     class Array3DCUDA : public Field3DImpl<T> {
      |           ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp:292:95:   required from here
  292 |                                                           BoundaryConditionSpecifier::INTERNAL);// BoundaryConditionSpecifier::INTERNAL= -1
      |                                                                                               ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = signed char]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = signed char]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DCUDA<signed char>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp:292:95:   required from here
  292 |                                                           BoundaryConditionSpecifier::INTERNAL);// BoundaryConditionSpecifier::INTERNAL= -1
      |                                                                                               ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:125:23: warning: ‘CompuCell3D::Dim3D CompuCell3D::Field3DImpl<T>::getDim() const [with T = signed char]’ was hidden [-Woverloaded-virtual=]
  125 |         virtual Dim3D getDim() const { return dim; }
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:1029:15: note:   by ‘CompuCell3D::Dim3D CompuCell3D::Array3DCUDA<T>::getDim() [with T = signed char]’
 1029 |         Dim3D getDim() { return Field3DImpl<T>::dim; }
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<unsigned char>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:952:11:   required from ‘class CompuCell3D::Array3DCUDA<unsigned char>’
  952 |     class Array3DCUDA : public Field3DImpl<T> {
      |           ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp:405:37:   required from here
  405 |                     h_celltype_field->set(pt, cell->type);
      |                                     ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = unsigned char]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = unsigned char]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DCUDA<unsigned char>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp:405:37:   required from here
  405 |                     h_celltype_field->set(pt, cell->type);
      |                                     ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:125:23: warning: ‘CompuCell3D::Dim3D CompuCell3D::Field3DImpl<T>::getDim() const [with T = unsigned char]’ was hidden [-Woverloaded-virtual=]
  125 |         virtual Dim3D getDim() const { return dim; }
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:1029:15: note:   by ‘CompuCell3D::Dim3D CompuCell3D::Array3DCUDA<T>::getDim() [with T = unsigned char]’
 1029 |         Dim3D getDim() { return Field3DImpl<T>::dim; }
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DCUDA<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp:406:35:   required from here
  406 |                     h_cellid_field->set(pt, cell->id);
      |                                   ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:125:23: warning: ‘CompuCell3D::Dim3D CompuCell3D::Field3DImpl<T>::getDim() const [with T = float]’ was hidden [-Woverloaded-virtual=]
  125 |         virtual Dim3D getDim() const { return dim; }
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:1029:15: note:   by ‘CompuCell3D::Dim3D CompuCell3D::Array3DCUDA<T>::getDim() [with T = float]’
 1029 |         Dim3D getDim() { return Field3DImpl<T>::dim; }
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DContiguous<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp:799:113:   required from ‘float CompuCell3D::DiffusionSolverFE<Cruncher>::couplingTerm(CompuCell3D::Point3D&, std::vector<CompuCell3D::CouplingData>&, float) [with Cruncher = CompuCell3D::DiffusionSolverFE_CPU]’
  799 |         coupledConcentration = static_cast<Cruncher *>(this)->getConcentrationField(_couplDataVec[i].fieldIdx)->get(
      |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp:1273:20:   required from here
 1273 | class CompuCell3D::DiffusionSolverFE<DiffusionSolverFE_CPU>;
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:125:23: warning: ‘CompuCell3D::Dim3D CompuCell3D::Field3DImpl<T>::getDim() const [with T = float]’ was hidden [-Woverloaded-virtual=]
  125 |         virtual Dim3D getDim() const { return dim; }
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:823:15: note:   by ‘CompuCell3D::Dim3D CompuCell3D::Array3DContiguous<T>::getDim() [with T = float]’
  823 |         Dim3D getDim() { return Field3DImpl<T>::dim; }
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:926:10: note:   by ‘void CompuCell3D::Array3DContiguous<T>::setDim(CompuCell3D::Dim3D) [with T = float]’
  926 |     void Array3DContiguous<T>::setDim(const Dim3D newDim) {
      |          ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp: In instantiation of ‘void CompuCell3D::DiffusionSolverFE<Cruncher>::init(CompuCell3D::Simulator*, CC3DXMLElement*) [with Cruncher = CompuCell3D::DiffusionSolverFE_CPU]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp:1273:20:   required from here
 1273 | class CompuCell3D::DiffusionSolverFE<DiffusionSolverFE_CPU>;
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp:312:11: warning: unused variable ‘maxDiffConst’ [-Wunused-variable]
  312 |     float maxDiffConst = 0.0;
      |           ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp:366:11: warning: unused variable ‘extraCheck’ [-Wunused-variable]
  366 |     float extraCheck;
      |           ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp: In instantiation of ‘void CompuCell3D::DiffusionSolverFE<Cruncher>::prepCellTypeField(int) [with Cruncher = CompuCell3D::DiffusionSolverFE_CPU]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp:1273:20:   required from here
 1273 | class CompuCell3D::DiffusionSolverFE<DiffusionSolverFE_CPU>;
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp:851:11: warning: variable ‘workFieldDimInternal’ set but not used [-Wunused-but-set-variable=]
  851 |     Dim3D workFieldDimInternal = getInternalDim();
      |           ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp: In instantiation of ‘void CompuCell3D::DiffusionSolverFE<Cruncher>::init(CompuCell3D::Simulator*, CC3DXMLElement*) [with Cruncher = CompuCell3D::DiffusionSolverFE_CPU_Implicit]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp:1276:20:   required from here
 1276 | class CompuCell3D::DiffusionSolverFE<DiffusionSolverFE_CPU_Implicit>;
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp:312:11: warning: unused variable ‘maxDiffConst’ [-Wunused-variable]
  312 |     float maxDiffConst = 0.0;
      |           ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp:366:11: warning: unused variable ‘extraCheck’ [-Wunused-variable]
  366 |     float extraCheck;
      |           ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp: In instantiation of ‘void CompuCell3D::DiffusionSolverFE<Cruncher>::prepCellTypeField(int) [with Cruncher = CompuCell3D::DiffusionSolverFE_CPU_Implicit]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp:1276:20:   required from here
 1276 | class CompuCell3D::DiffusionSolverFE<DiffusionSolverFE_CPU_Implicit>;
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp:851:11: warning: variable ‘workFieldDimInternal’ set but not used [-Wunused-but-set-variable=]
  851 |     Dim3D workFieldDimInternal = getInternalDim();
      |           ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘CompuCell3D::Array3DContiguous<T>::Array3DContiguous(CompuCell3D::Dim3D&, T&) [with T = float]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusableVectorCommon.h:77:52:   required from ‘void CompuCell3D::DiffusableVectorCommon<precision, Array_Type>::allocateDiffusableFieldVector(unsigned int, CompuCell3D::Dim3D) [with precision = float; Array_Type = CompuCell3D::Array3DContiguous]’
   77 |                 concentrationFieldVector.push_back(new Array_t(fieldDim, val));
      |                                                    ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp:349:65:   required from ‘void CompuCell3D::DiffusionSolverFE<Cruncher>::init(CompuCell3D::Simulator*, CC3DXMLElement*) [with Cruncher = CompuCell3D::DiffusionSolverFE_CPU]’
  349 |     static_cast<Cruncher *>(this)->allocateDiffusableFieldVector(diffSecrFieldTuppleVec.size(), fieldDim);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.cpp:1273:20:   required from here
 1273 | class CompuCell3D::DiffusionSolverFE<DiffusionSolverFE_CPU>;
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:844:13: warning: ‘CompuCell3D::Array3DContiguous<float>::shiftArray’ will be initialized after [-Wreorder]
  844 |         int shiftArray;
      |             ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:843:13: warning:   ‘int CompuCell3D::Array3DContiguous<float>::shiftSwap’ [-Wreorder]
  843 |         int shiftSwap;
      |             ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:742:9: warning:   when initialized here [-Wreorder]
  742 |         Array3DContiguous(Dim3D &_dim, T &_initVal = T()) :
      |         ^~~~~~~~~~~~~~~~~
[191/395] /usr/bin/g++ -DPDESolversShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/PDESolversProxy.cpp.o -MF core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/PDESolversProxy.cpp.o.d -o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/PDESolversProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/PDESolversProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/AdvectionDiffusionSolverFE.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/PDESolversProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusableVector.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusableGraph.h:10,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/AdvectionDiffusionSolverFE.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PixelTracker/PixelTrackerPlugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.h:27,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.h:10,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/PDESolversProxy.cpp:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Steppable.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/AdvectionDiffusionSolverFE.h:5:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DBordersField3DAdapter<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:150:26:   required from here
  150 |         class PDESOLVERS_EXPORT ReactionDiffusionSolverFVM :public DiffusableVector<float>
      |                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:515:18: note:   by ‘void CompuCell3D::Array3DBordersField3DAdapter<T>::setDim(CompuCell3D::Dim3D) [with T = float]’
  515 |     virtual void setDim(const Dim3D theDim) {
      |                  ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/PDESolversProxy.cpp:11:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h: In member function ‘bool CompuCell3D::ReactionDiffusionSolverFVM::isValid(CompuCell3D::Point3D)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:1164:84: warning: catching polymorphic type ‘class CompuCell3D::CC3DException’ by value [-Wcatch-value=]
 1164 |                 bool isValid(Point3D pt) { try { pt2ind(pt); return true; } catch (CC3DException) { return false; } }
      |                                                                                    ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Core:248,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/SparseCore:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Sparse:17,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/PDESolversProxy.cpp:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/util/Memory.h: In function ‘Index Eigen::internal::first_aligned(const Scalar*, Index)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/util/Memory.h:449:48: warning: typedef ‘Packet’ locally defined but not used [-Wunused-local-typedefs]
  449 |   typedef typename packet_traits<Scalar>::type Packet;
      |                                                ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Core:268:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Functors.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Functors.h:936:28: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  936 | struct functor_traits<std::binder2nd<T> >
      |                            ^~~~~~~~~
In file included from /usr/include/c++/16/bits/stl_function.h:1594:
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Functors.h:940:28: warning: ‘template<class _Operation> class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  940 | struct functor_traits<std::binder1st<T> >
      |                            ^~~~~~~~~
/usr/include/c++/16/backward/binders.h:108:11: note: declared here
  108 |     class binder1st
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Functors.h:944:28: warning: ‘template<class _Predicate> class std::unary_negate’ is deprecated [-Wdeprecated-declarations]
  944 | struct functor_traits<std::unary_negate<T> >
      |                            ^~~~~~~~~~~~
/usr/include/c++/16/bits/stl_function.h:1112:33: note: declared here
 1112 |     class _GLIBCXX17_DEPRECATED unary_negate
      |                                 ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/Functors.h:948:28: warning: ‘template<class _Predicate> class std::binary_negate’ is deprecated [-Wdeprecated-declarations]
  948 | struct functor_traits<std::binary_negate<T> >
      |                            ^~~~~~~~~~~~~
/usr/include/c++/16/bits/stl_function.h:1139:33: note: declared here
 1139 |     class _GLIBCXX17_DEPRECATED binary_negate
      |                                 ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/MatrixBase.h:138,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Core:271:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/MatrixCwiseUnaryOps.h:62:32: warning: ‘template<class _Operation> class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
   62 | inline const CwiseUnaryOp<std::binder1st<std::equal_to<Scalar> >, const Derived>
      |                                ^~~~~~~~~
/usr/include/c++/16/backward/binders.h:108:11: note: declared here
  108 |     class binder1st
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/MatrixCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder1st<std::equal_to<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::MatrixBase<Derived>::cwiseEqual(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/MatrixCwiseUnaryOps.h:65:28: warning: ‘template<class _Operation> class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
   65 |   return CwiseUnaryOp<std::binder1st<std::equal_to<Scalar> >,const Derived>
      |                            ^~~~~~~~~
/usr/include/c++/16/backward/binders.h:108:11: note: declared here
  108 |     class binder1st
      |           ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Core:317:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In member function ‘void Eigen::internal::gebp_kernel<LhsScalar, RhsScalar, Index, mr, nr, ConjugateLhs, ConjugateRhs>::operator()(ResScalar*, Index, const LhsScalar*, const RhsScalar*, Index, Index, Index, ResScalar, Index, Index, Index, Index, RhsScalar*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h:567:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
  567 |         if(nr==4) traits.initAcc(C3);
      |         ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h:568:19: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
  568 |                   traits.initAcc(C4);
      |                   ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h:939:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
  939 |         if(nr==4) R3 = ploadu<ResPacket>(r3);
      |         ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h:941:19: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
  941 |                   traits.acc(C0, alphav, R0);
      |                   ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h:944:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
  944 |         if(nr==4) traits.acc(C3, alphav, R3);
      |         ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/GeneralBlockPanelKernel.h:946:19: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
  946 |                   pstoreu(r0, R0);
      |                   ^~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Core:324:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h: In static member function ‘static void Eigen::internal::selfadjoint_matrix_vector_product<Scalar, Index, StorageOrder, UpLo, ConjugateLhs, ConjugateRhs, Version>::run(Index, const Scalar*, Index, const Scalar*, Index, Scalar*, Scalar)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h:74:43: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
   74 |     register const Scalar* EIGEN_RESTRICT A0 = lhs + j*lhsStride;
      |                                           ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h:75:43: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
   75 |     register const Scalar* EIGEN_RESTRICT A1 = lhs + (j+1)*lhsStride;
      |                                           ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h:142:43: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
  142 |     register const Scalar* EIGEN_RESTRICT A0 = lhs + j*lhsStride;
      |                                           ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/products/SelfadjointMatrixVector.h:38:44: warning: typedef ‘RealScalar’ locally defined but not used [-Wunused-local-typedefs]
   38 |   typedef typename NumTraits<Scalar>::Real RealScalar;
      |                                            ^~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/ArrayBase.h:108,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Core:340:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/MatrixCwiseUnaryOps.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/MatrixCwiseUnaryOps.h:62:32: warning: ‘template<class _Operation> class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
   62 | inline const CwiseUnaryOp<std::binder1st<std::equal_to<Scalar> >, const Derived>
      |                                ^~~~~~~~~
/usr/include/c++/16/backward/binders.h:108:11: note: declared here
  108 |     class binder1st
      |           ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/ArrayBase.h:109:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:190:34: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  190 |   inline const CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                                  ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:196:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  196 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator==,  std::equal_to)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:190:34: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  190 |   inline const CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                                  ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:197:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  197 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator!=,  std::not_equal_to)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:190:34: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  190 |   inline const CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                                  ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:198:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  198 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator<,   std::less)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:190:34: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  190 |   inline const CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                                  ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:199:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  199 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator<=,  std::less_equal)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:190:34: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  190 |   inline const CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                                  ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:200:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  200 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator>,   std::greater)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:190:34: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  190 |   inline const CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                                  ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:201:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  201 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator>=,  std::greater_equal)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/MatrixCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder1st<std::equal_to<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::ArrayBase<Derived>::cwiseEqual(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/MatrixCwiseUnaryOps.h:65:28: warning: ‘template<class _Operation> class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
   65 |   return CwiseUnaryOp<std::binder1st<std::equal_to<Scalar> >,const Derived>
      |                            ^~~~~~~~~
/usr/include/c++/16/backward/binders.h:108:11: note: declared here
  108 |     class binder1st
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder2nd<std::equal_to<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::ArrayBase<Derived>::operator==(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:192:30: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  192 |     return CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                              ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:196:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  196 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator==,  std::equal_to)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder2nd<std::not_equal_to<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::ArrayBase<Derived>::operator!=(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:192:30: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  192 |     return CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                              ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:197:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  197 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator!=,  std::not_equal_to)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder2nd<std::less<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::ArrayBase<Derived>::operator<(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:192:30: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  192 |     return CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                              ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:198:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  198 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator<,   std::less)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder2nd<std::less_equal<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::ArrayBase<Derived>::operator<=(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:192:30: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  192 |     return CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                              ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:199:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  199 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator<=,  std::less_equal)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder2nd<std::greater<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::ArrayBase<Derived>::operator>(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:192:30: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  192 |     return CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                              ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:200:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  200 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator>,   std::greater)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder2nd<std::greater_equal<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::ArrayBase<Derived>::operator>=(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:192:30: warning: ‘template<class _Operation> class std::binder2nd’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
  192 |     return CwiseUnaryOp<std::binder2nd<FUNCTOR<Scalar> >, const Derived> \
      |                              ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/Core/../plugins/ArrayCwiseUnaryOps.h:201:1: note: in expansion of macro ‘EIGEN_MAKE_SCALAR_CWISE_UNARY_OP’
  201 | EIGEN_MAKE_SCALAR_CWISE_UNARY_OP(operator>=,  std::greater_equal)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/16/backward/binders.h:144:11: note: declared here
  144 |     class binder2nd
      |           ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/SparseMatrixBase.h:137,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/SparseCore:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/../plugins/MatrixCwiseUnaryOps.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/../plugins/MatrixCwiseUnaryOps.h:62:32: warning: ‘template<class _Operation> class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
   62 | inline const CwiseUnaryOp<std::binder1st<std::equal_to<Scalar> >, const Derived>
      |                                ^~~~~~~~~
/usr/include/c++/16/backward/binders.h:108:11: note: declared here
  108 |     class binder1st
      |           ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/../plugins/MatrixCwiseUnaryOps.h: In member function ‘const Eigen::CwiseUnaryOp<std::binder1st<std::equal_to<typename Eigen::internal::traits<T>::Scalar> >, const Derived> Eigen::SparseMatrixBase<Derived>::cwiseEqual(const Scalar&) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/../plugins/MatrixCwiseUnaryOps.h:65:28: warning: ‘template<class _Operation> class std::binder1st’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations]
   65 |   return CwiseUnaryOp<std::binder1st<std::equal_to<Scalar> >,const Derived>
      |                            ^~~~~~~~~
/usr/include/c++/16/backward/binders.h:108:11: note: declared here
  108 |     class binder1st
      |           ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/SparseCore:40:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/SparseMatrix.h: In function ‘void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/SparseMatrix.h:1006:44: warning: typedef ‘Index’ locally defined but not used [-Wunused-local-typedefs]
 1006 |   typedef typename SparseMatrixType::Index Index;
      |                                            ^~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/SparseCore:59:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h: In member function ‘void Eigen::SparseSelfAdjointTimeDenseProduct<Lhs, Rhs, UpLo>::scaleAndAddTo(Dest&, Scalar) const’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/SparseCore/SparseSelfAdjointView.h:215:56: warning: typedef ‘_Rhs’ locally defined but not used [-Wunused-local-typedefs]
  215 |       typedef typename internal::remove_all<Rhs>::type _Rhs;
      |                                                        ^~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/OrderingMethods:19,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/Sparse:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/OrderingMethods/Amd.h: In function ‘void Eigen::internal::minimum_degree_ordering(Eigen::SparseMatrix<Scalar, 0, Index>&, Eigen::PermutationMatrix<-1, -1, Index>&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen/Eigen/src/OrderingMethods/Amd.h:97:47: warning: typedef ‘CCS’ locally defined but not used [-Wunused-local-typedefs]
   97 |   typedef SparseMatrix<Scalar,ColMajor,Index> CCS;
      |                                               ^~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/PDESolversProxy.cpp:19:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.h:282:22: warning: ‘void CompuCell3D::DiffusionSolverFE<Cruncher>::Scale(const std::vector<float>&, float, const std::vector<float>&) [with Cruncher = CompuCell3D::DiffusionSolverFE_CPU_Implicit]’ was hidden [-Woverloaded-virtual=]
  282 |         virtual void Scale(std::vector<float> const &maxDiffConstVec, float maxStableDiffConstant,
      |                      ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.h:34:22: note:   by ‘virtual void CompuCell3D::DiffusionSolverFE_CPU_Implicit::Scale(const std::vector<float>&, float)’
   34 |         virtual void Scale(std::vector<float> const &maxDiffConstVec, float maxStableDiffConstant);
      |                      ^~~~~
[192/395] /usr/bin/g++ -DPDESolversShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/SteadyStateDiffusionSolver2D.cpp.o -MF core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/SteadyStateDiffusionSolver2D.cpp.o.d -o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/SteadyStateDiffusionSolver2D.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver2D.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver2D.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /usr/include/c++/16/bits/locale_classes.h:43,
                 from /usr/include/c++/16/bits/ios_base.h:43,
                 from /usr/include/c++/16/ios:46,
                 from /usr/include/c++/16/bits/ostream.h:43,
                 from /usr/include/c++/16/ostream:42,
                 from /usr/include/c++/16/iostream:43,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3DExceptions.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:6:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:33:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver2D.cpp: In member function ‘virtual void CompuCell3D::SteadyStateDiffusionSolver2DSerializer::serialize()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver2D.cpp:43:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::SteadyStateDiffusionSecretionFieldTupple>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   43 |     for (int i = 0; i < solverPtr->diffSecrFieldTuppleVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver2D.cpp: In member function ‘virtual void CompuCell3D::SteadyStateDiffusionSolver2DSerializer::readFromFile()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver2D.cpp:58:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::SteadyStateDiffusionSecretionFieldTupple>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   58 |         for (int i = 0; i < solverPtr->diffSecrFieldTuppleVec.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver2D.cpp: In member function ‘void CompuCell3D::SteadyStateDiffusionSolver2D::secreteSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver2D.cpp:358:21: warning: unused variable ‘containerRef’ [-Wunused-variable]
  358 |     vector<double> &containerRef = concentrationFieldPtr->getContainerRef();
      |                     ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver2D.cpp:362:20: warning: unused variable ‘cellInventoryPtr’ [-Wunused-variable]
  362 |     CellInventory *cellInventoryPtr = &(potts->getCellInventory());
      |                    ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver2D.cpp: In member function ‘void CompuCell3D::SteadyStateDiffusionSolver2D::diffuseSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver2D.cpp:786:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  786 |     for (int i = 0; i < containerRef.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver2D.cpp: In member function ‘virtual void CompuCell3D::SteadyStateDiffusionSolver2D::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver2D.cpp:1113:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::SteadyStateDiffusionSecretionFieldTupple>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1113 |     for (int i = 0; i < diffSecrFieldTuppleVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[193/395] /usr/bin/g++ -DPDESolversShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/SteadyStateDiffusionSolver.cpp.o -MF core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/SteadyStateDiffusionSolver.cpp.o.d -o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/SteadyStateDiffusionSolver.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /usr/include/c++/16/bits/locale_classes.h:43,
                 from /usr/include/c++/16/bits/ios_base.h:43,
                 from /usr/include/c++/16/ios:46,
                 from /usr/include/c++/16/bits/ostream.h:43,
                 from /usr/include/c++/16/ostream:42,
                 from /usr/include/c++/16/iostream:43,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3DExceptions.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:6:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:33:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.cpp: In member function ‘virtual void CompuCell3D::SteadyStateDiffusionSolverSerializer::serialize()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.cpp:42:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::DiffusionSecretionFastFieldTupple3D>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   42 |     for (int i = 0; i < solverPtr->diffSecrFieldTuppleVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.cpp: In member function ‘virtual void CompuCell3D::SteadyStateDiffusionSolverSerializer::readFromFile()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.cpp:57:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::DiffusionSecretionFastFieldTupple3D>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   57 |         for (int i = 0; i < solverPtr->diffSecrFieldTuppleVec.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.cpp: In member function ‘virtual void CompuCell3D::SteadyStateDiffusionSolver::init(CompuCell3D::Simulator*, CC3DXMLElement*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.cpp:148:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
  148 |     if (maxLMN < fieldDim.z + 1)
      |     ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.cpp:152:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
  152 |         scratchVec.assign(30 + fieldDim.x+1+1 + fieldDim.y+1+1 + 5*(fieldDim.z+1)+maxLMN+7*((int)(fieldDim.x+1+1)+(int)(fieldDim.y+1+1)),0.0);
      |         ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.cpp: In member function ‘void CompuCell3D::SteadyStateDiffusionSolver::secreteOxygenSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.cpp:357:21: warning: unused variable ‘containerRef’ [-Wunused-variable]
  357 |     vector<double> &containerRef = concentrationFieldPtr->getContainerRef();
      |                     ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.cpp:362:20: warning: unused variable ‘cellInventoryPtr’ [-Wunused-variable]
  362 |     CellInventory *cellInventoryPtr = &(potts->getCellInventory());
      |                    ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.cpp: In member function ‘void CompuCell3D::SteadyStateDiffusionSolver::secreteSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.cpp:427:21: warning: unused variable ‘containerRef’ [-Wunused-variable]
  427 |     vector<double> &containerRef = concentrationFieldPtr->getContainerRef();
      |                     ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.cpp:431:20: warning: unused variable ‘cellInventoryPtr’ [-Wunused-variable]
  431 |     CellInventory *cellInventoryPtr = &(potts->getCellInventory());
      |                    ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.cpp: In member function ‘void CompuCell3D::SteadyStateDiffusionSolver::diffuseSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.cpp:904:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  904 |     for (int i = 0; i < containerRef.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.cpp: In member function ‘virtual void CompuCell3D::SteadyStateDiffusionSolver::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.cpp:1302:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::DiffusionSecretionFastFieldTupple3D>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1302 |     for (int i = 0; i < diffSecrFieldTuppleVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/16/map:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:27:
In member function ‘std::_Rb_tree<char, std::pair<char const, CompuCell3D::OxygenSecretionParameters>, std::_Select1st<std::pair<char const, CompuCell3D::OxygenSecretionParameters> >, std::less<char>, std::allocator<std::pair<char const, CompuCell3D::OxygenSecretionParameters> > >::_M_lower_bound(std::_Rb_tree_node_base*, std::_Rb_tree_node_base*, char const&) const’,
    inlined from ‘std::_Rb_tree<char, std::pair<char const, CompuCell3D::OxygenSecretionParameters>, std::_Select1st<std::pair<char const, CompuCell3D::OxygenSecretionParameters> >, std::less<char>, std::allocator<std::pair<char const, CompuCell3D::OxygenSecretionParameters> > >::lower_bound(char const&)’ at /usr/include/c++/16/bits/stl_tree.h:1921:16,
    inlined from ‘std::map<char, CompuCell3D::OxygenSecretionParameters, std::less<char>, std::allocator<std::pair<char const, CompuCell3D::OxygenSecretionParameters> > >::lower_bound(char const&)’ at /usr/include/c++/16/bits/stl_map.h:1504:32,
    inlined from ‘std::map<char, CompuCell3D::OxygenSecretionParameters, std::less<char>, std::allocator<std::pair<char const, CompuCell3D::OxygenSecretionParameters> > >::insert<std::pair<unsigned char, CompuCell3D::OxygenSecretionParameters> >(std::pair<unsigned char, CompuCell3D::OxygenSecretionParameters>&&)std::enable_if<std::is_constructible<std::pair<char const, CompuCell3D::OxygenSecretionParameters>, std::pair<unsigned char, CompuCell3D::OxygenSecretionParameters> >::value, std::pair<std::_Rb_tree_iterator<std::pair<char const, CompuCell3D::OxygenSecretionParameters> >, bool> >::type’ at /usr/include/c++/16/bits/stl_map.h:973:31,
    inlined from ‘CompuCell3D::SteadyStateDiffusionSolver::update(CC3DXMLElement*, bool)’ at /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.cpp:1190:44:
/usr/include/c++/16/bits/stl_tree.h:2645:9: warning: ‘cellType’ may be used uninitialized [-Wmaybe-uninitialized]
 2645 |         if (!_M_key_compare(_S_key(__x), __k))
      |         ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.cpp: In member function ‘CompuCell3D::SteadyStateDiffusionSolver::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.cpp:1150:31: note: ‘cellType’ was declared here
 1150 |                 unsigned char cellType;
      |                               ^~~~~~~~
[194/395] /usr/bin/g++ -DPDESolversShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/DiffSecrData.cpp.o -MF core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/DiffSecrData.cpp.o.d -o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/DiffSecrData.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffSecrData.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffSecrData.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:3:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffSecrData.cpp:4:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffSecrData.cpp: In member function ‘virtual void CompuCell3D::DiffusionData::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffSecrData.cpp:130:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
  130 |     if (_xmlData->findElement("AdditionalTerm"))
      |     ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffSecrData.cpp:133:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
  133 |         if(_xmlData->findElement("CallUserFuncs"))
      |         ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffSecrData.cpp:147:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  147 |     for(int i = 0; i< fieldDependencies.size(); i++) {
      |                    ~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffSecrData.cpp: In member function ‘virtual void CompuCell3D::SecretionData::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffSecrData.cpp:303:23: warning: unused variable ‘typeId’ [-Wunused-variable]
  303 |         unsigned char typeId;
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffSecrData.cpp:304:23: warning: unused variable ‘contactTypeId’ [-Wunused-variable]
  304 |         unsigned char contactTypeId;
      |                       ^~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffSecrData.cpp:347:23: warning: unused variable ‘typeId’ [-Wunused-variable]
  347 |         unsigned char typeId;
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffSecrData.cpp:369:23: warning: unused variable ‘typeId’ [-Wunused-variable]
  369 |         unsigned char typeId;
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffSecrData.cpp:391:23: warning: unused variable ‘typeId’ [-Wunused-variable]
  391 |         unsigned char typeId;
      |                       ^~~~~~
[195/395] /usr/bin/g++ -DPDESolversShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/FlexibleDiffusionSolverFE.cpp.o -MF core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/FlexibleDiffusionSolverFE.cpp.o.d -o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/FlexibleDiffusionSolverFE.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverFE.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverFE.cpp:4:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /usr/include/c++/16/bits/locale_classes.h:43,
                 from /usr/include/c++/16/bits/ios_base.h:43,
                 from /usr/include/c++/16/ios:46,
                 from /usr/include/c++/16/bits/ostream.h:43,
                 from /usr/include/c++/16/ostream:42,
                 from /usr/include/c++/16/iostream:43,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3DExceptions.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:6:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:33:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DContiguous<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverFE.cpp:172:47:   required from here
  172 |     workFieldDim = concentrationFieldVector[0]->getInternalDim();
      |                                               ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:125:23: warning: ‘CompuCell3D::Dim3D CompuCell3D::Field3DImpl<T>::getDim() const [with T = float]’ was hidden [-Woverloaded-virtual=]
  125 |         virtual Dim3D getDim() const { return dim; }
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:823:15: note:   by ‘CompuCell3D::Dim3D CompuCell3D::Array3DContiguous<T>::getDim() [with T = float]’
  823 |         Dim3D getDim() { return Field3DImpl<T>::dim; }
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:926:10: note:   by ‘void CompuCell3D::Array3DContiguous<T>::setDim(CompuCell3D::Dim3D) [with T = float]’
  926 |     void Array3DContiguous<T>::setDim(const Dim3D newDim) {
      |          ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverFE.cpp: In member function ‘void CompuCell3D::FlexibleDiffusionSolverFE::diffuseSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverFE.cpp:1265:48: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
 1265 |                     for (register unsigned int i = 0; i <= maxNeighborIndex /*offsetVec.size()*/ ; ++i) {
      |                                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverFE.cpp:1197:37: warning: unused variable ‘nCell’ [-Wunused-variable]
 1197 |         CellG *currentCellPtr = 0, *nCell = 0;
      |                                     ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverFE.cpp:1198:15: warning: unused variable ‘currentCellType’ [-Wunused-variable]
 1198 |         short currentCellType = 0;
      |               ^~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverFE.cpp:1203:16: warning: unused variable ‘neighborCellPtr’ [-Wunused-variable]
 1203 |         CellG *neighborCellPtr = 0;
      |                ^~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverFE.cpp:1143:27: warning: unused variable ‘concentrationFieldPtr’ [-Wunused-variable]
 1143 |     ConcentrationField_t *concentrationFieldPtr = concentrationFieldVector[idx];
      |                           ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘CompuCell3D::Array3DContiguous<T>::Array3DContiguous(CompuCell3D::Dim3D&, T&) [with T = float]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusableVectorCommon.h:77:52:   required from ‘void CompuCell3D::DiffusableVectorCommon<precision, Array_Type>::allocateDiffusableFieldVector(unsigned int, CompuCell3D::Dim3D) [with precision = float; Array_Type = CompuCell3D::Array3DContiguous]’
   77 |                 concentrationFieldVector.push_back(new Array_t(fieldDim, val));
      |                                                    ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverFE.cpp:171:34:   required from here
  171 |     allocateDiffusableFieldVector(diffSecrFieldTuppleVec.size(), fieldDim);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:844:13: warning: ‘CompuCell3D::Array3DContiguous<float>::shiftArray’ will be initialized after [-Wreorder]
  844 |         int shiftArray;
      |             ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:843:13: warning:   ‘int CompuCell3D::Array3DContiguous<float>::shiftSwap’ [-Wreorder]
  843 |         int shiftSwap;
      |             ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:742:9: warning:   when initialized here [-Wreorder]
  742 |         Array3DContiguous(Dim3D &_dim, T &_initVal = T()) :
      |         ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverFE.cpp: In member function ‘CompuCell3D::FlexibleDiffusionSolverFE::secreteOnContactSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverFE.cpp:401:9: warning: ‘contactCellMapMediumPtr’ may be used uninitialized [-Wmaybe-uninitialized]
  401 | #pragma omp parallel
      |         ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverFE.cpp:358:37: note: ‘contactCellMapMediumPtr’ was declared here
  358 |     std::map<unsigned char, float> *contactCellMapMediumPtr;
      |                                     ^~~~~~~~~~~~~~~~~~~~~~~
[196/395] /usr/bin/g++ -DPDESolversShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/FlexibleDiffusionSolverADE.cpp.o -MF core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/FlexibleDiffusionSolverADE.cpp.o.d -o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/FlexibleDiffusionSolverADE.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /usr/include/c++/16/bits/locale_classes.h:43,
                 from /usr/include/c++/16/bits/ios_base.h:43,
                 from /usr/include/c++/16/ios:46,
                 from /usr/include/c++/16/bits/ostream.h:43,
                 from /usr/include/c++/16/ostream:42,
                 from /usr/include/c++/16/iostream:43,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3DExceptions.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:6:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:33:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp: In member function ‘virtual void CompuCell3D::FlexibleDiffusionSolverADE::init(CompuCell3D::Simulator*, CC3DXMLElement*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:99:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::CouplingData>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   99 |         for (int j = 0; j < diffSecrFieldTuppleVec[i].diffData.couplingDataVec.size(); ++j) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:101:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  101 |             for (int idx = 0; idx < concentrationFieldNameVectorTmp.size(); ++idx) {
      |                               ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:109:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  109 |                 if (idx == concentrationFieldNameVectorTmp.size() - 1) {
      |                     ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DBordersField3DAdapter<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:147:43:   required from here
  147 |         simPtr->registerConcentrationField(concentrationFieldNameVector[i], concentrationFieldVector[i]);
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:515:18: note:   by ‘void CompuCell3D::Array3DBordersField3DAdapter<T>::setDim(CompuCell3D::Dim3D) [with T = float]’
  515 |     virtual void setDim(const Dim3D theDim) {
      |                  ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp: In member function ‘void CompuCell3D::FlexibleDiffusionSolverADE::secreteOnContactSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:325:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  325 |                     for (int i = 0; i <= maxNeighborIndex/*offsetVec.size()*/ ; ++i) {
      |                                     ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:362:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  362 |                         for (int i = 0; i <= maxNeighborIndex/*offsetVec.size() */; ++i) {
      |                                         ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp: In member function ‘void CompuCell3D::FlexibleDiffusionSolverADE::secreteSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:408:21: warning: unused variable ‘concentrationField’ [-Wunused-variable]
  408 |     Field3D<float> *concentrationField = concentrationFieldVector[idx];
      |                     ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp: In member function ‘void CompuCell3D::FlexibleDiffusionSolverADE::secreteConstantConcentrationSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:507:21: warning: unused variable ‘concentrationField’ [-Wunused-variable]
  507 |     Field3D<float> *concentrationField = concentrationFieldVector[idx];
      |                     ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:508:11: warning: unused variable ‘currentConcentration’ [-Wunused-variable]
  508 |     float currentConcentration;
      |           ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp: In member function ‘float CompuCell3D::FlexibleDiffusionSolverADE::couplingTerm(CompuCell3D::Point3D&, std::vector<CompuCell3D::CouplingData>&, float)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:591:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::CouplingData>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  591 |     for (int i = 0; i < _couplDataVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp: In member function ‘void CompuCell3D::FlexibleDiffusionSolverADE::diffuseSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:795:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  795 |     for (int bb = 0; bb < tmp.size(); bb++) {
      |                      ~~~^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:808:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  808 |                 for (int m = 0; m <= maxNeighborIndex; ++m) {
      |                                 ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:831:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  831 |     for (int bb = 0; bb < tmp.size(); bb++) {
      |                      ~~~^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:844:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  844 |                 for (int m = 0; m <= maxNeighborIndex; ++m) {
      |                                 ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:865:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  865 |     for (int bb = 0; bb < tmp.size(); bb++) {
      |                      ~~~^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:878:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  878 |                 for (int m = 0; m <= maxNeighborIndex; ++m) {
      |                                 ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:914:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  914 |                 for (int m = 0; m <= maxNeighborIndex; ++m) {
      |                                 ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:946:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  946 |                 for (int m = 0; m <= maxNeighborIndex; ++m) {
      |                                 ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:701:18: warning: unused variable ‘token’ [-Wunused-variable]
  701 |     unsigned int token = 0;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:702:12: warning: unused variable ‘distance’ [-Wunused-variable]
  702 |     double distance;
      |            ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:703:33: warning: unused variable ‘nCell’ [-Wunused-variable]
  703 |     CellG *currentCellPtr = 0, *nCell = 0;
      |                                 ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:705:11: warning: unused variable ‘currentCellType’ [-Wunused-variable]
  705 |     short currentCellType = 0;
      |           ^~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp: In member function ‘virtual void CompuCell3D::FlexibleDiffusionSolverADE::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.cpp:1260:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::DiffusionSecretionADEFieldTupple>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1260 |     for (int i = 0; i < diffSecrFieldTuppleVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[197/395] /usr/bin/g++ -DPDESolversShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/ReactionDiffusionSolverFE_SavHog.cpp.o -MF core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/ReactionDiffusionSolverFE_SavHog.cpp.o.d -o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/ReactionDiffusionSolverFE_SavHog.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE_SavHog.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE_SavHog.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /usr/include/c++/16/bits/locale_classes.h:43,
                 from /usr/include/c++/16/bits/ios_base.h:43,
                 from /usr/include/c++/16/ios:46,
                 from /usr/include/c++/16/bits/ostream.h:43,
                 from /usr/include/c++/16/ostream:42,
                 from /usr/include/c++/16/iostream:43,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3DExceptions.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:6:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:33:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE_SavHog.cpp: In member function ‘virtual void CompuCell3D::ReactionDiffusionSolverFE_SavHog::init(CompuCell3D::Simulator*, CC3DXMLElement*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE_SavHog.cpp:236:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  236 |     for (int i = 0; i < fieldNameVector.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DBordersField3DAdapter<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE_SavHog.cpp:241:43:   required from here
  241 |         simPtr->registerConcentrationField(concentrationFieldNameVector[i], concentrationFieldVector[i]);
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:515:18: note:   by ‘void CompuCell3D::Array3DBordersField3DAdapter<T>::setDim(CompuCell3D::Dim3D) [with T = float]’
  515 |     virtual void setDim(const Dim3D theDim) {
      |                  ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE_SavHog.cpp: In member function ‘void CompuCell3D::ReactionDiffusionSolverFE_SavHog::initializeConcentration()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE_SavHog.cpp:288:11: warning: unused variable ‘x’ [-Wunused-variable]
  288 |     float x, y, z;
      |           ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE_SavHog.cpp:288:14: warning: unused variable ‘y’ [-Wunused-variable]
  288 |     float x, y, z;
      |              ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE_SavHog.cpp:288:17: warning: unused variable ‘z’ [-Wunused-variable]
  288 |     float x, y, z;
      |                 ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE_SavHog.cpp: In member function ‘void CompuCell3D::ReactionDiffusionSolverFE_SavHog::diffuse()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE_SavHog.cpp:422:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  422 |                 for (int i = 0; i <= maxNeighborIndex/*offsetVec.size()*/ ; ++i) {
      |                                 ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE_SavHog.cpp:371:18: warning: unused variable ‘token’ [-Wunused-variable]
  371 |     unsigned int token = 0;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE_SavHog.cpp:372:12: warning: unused variable ‘distance’ [-Wunused-variable]
  372 |     double distance;
      |            ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE_SavHog.cpp:375:11: warning: unused variable ‘currentCellType’ [-Wunused-variable]
  375 |     short currentCellType = 0;
      |           ^~~~~~~~~~~~~~~
[198/395] /usr/bin/g++ -DPDESolversShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/KernelDiffusionSolver.cpp.o -MF core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/KernelDiffusionSolver.cpp.o.d -o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/KernelDiffusionSolver.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /usr/include/c++/16/bits/locale_classes.h:43,
                 from /usr/include/c++/16/bits/ios_base.h:43,
                 from /usr/include/c++/16/ios:46,
                 from /usr/include/c++/16/bits/ostream.h:43,
                 from /usr/include/c++/16/ostream:42,
                 from /usr/include/c++/16/iostream:43,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3DExceptions.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:6:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:33:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp: In member function ‘virtual void CompuCell3D::KernelDiffusionSolverSerializer::serialize()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:33:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::DiffusionSecretionKernelFieldTupple>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   33 |     for (int i = 0; i < solverPtr->diffSecrFieldTuppleVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp: In member function ‘virtual void CompuCell3D::KernelDiffusionSolverSerializer::readFromFile()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:48:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::DiffusionSecretionKernelFieldTupple>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   48 |         for (int i = 0; i < solverPtr->diffSecrFieldTuppleVec.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp: In member function ‘virtual void CompuCell3D::KernelDiffusionSolver::init(CompuCell3D::Simulator*, CC3DXMLElement*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:105:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::DiffusionSecretionKernelFieldTupple>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  105 |     for (int i = 0; i < diffSecrFieldTuppleVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DContiguous<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:124:47:   required from here
  124 |     workFieldDim = concentrationFieldVector[0]->getInternalDim();
      |                                               ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:125:23: warning: ‘CompuCell3D::Dim3D CompuCell3D::Field3DImpl<T>::getDim() const [with T = float]’ was hidden [-Woverloaded-virtual=]
  125 |         virtual Dim3D getDim() const { return dim; }
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:823:15: note:   by ‘CompuCell3D::Dim3D CompuCell3D::Array3DContiguous<T>::getDim() [with T = float]’
  823 |         Dim3D getDim() { return Field3DImpl<T>::dim; }
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:926:10: note:   by ‘void CompuCell3D::Array3DContiguous<T>::setDim(CompuCell3D::Dim3D) [with T = float]’
  926 |     void Array3DContiguous<T>::setDim(const Dim3D newDim) {
      |          ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:150:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  150 |     for (int q = 0; q < kernel.size(); q++) {
      |                     ~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:158:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  158 |     for (int q = 0; q < tempmaxNeighborIndex.size(); q++) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:172:38: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  172 |     for (unsigned int nIdx = 0; nIdx <= maxNeighborIndex; ++nIdx) {
      |                                 ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp: In member function ‘void CompuCell3D::KernelDiffusionSolver::initializeKernel(CompuCell3D::Simulator*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:210:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  210 |     for (int m = 0; m < numberOfFields; m++) {
      |                     ~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:221:42: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type’ {aka ‘int’} [-Wsign-compare]
  221 |         for (unsigned int nIdx = 0; nIdx <= tempmaxNeighborIndex[m]; ++nIdx) {
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:234:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<float>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  234 |         for (int i = 0; i < Ker.size(); i++) {
      |                         ~~^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:240:42: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<float>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  240 |                         for(int i = 0; i < Ker.size(); i++) {
      |                                        ~~^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:248:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<float>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  248 |         for (int i = 0; i < Ker.size(); i++) {
      |                         ~~^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:212:15: warning: unused variable ‘normalize’ [-Wunused-variable]
  212 |         float normalize = 0;
      |               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:204:9: warning: variable ‘dimension’ set but not used [-Wunused-but-set-variable=]
  204 |     int dimension = 0;
      |         ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp: In member function ‘void CompuCell3D::KernelDiffusionSolver::secreteConstantConcentrationSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:609:15: warning: unused variable ‘currentConcentration’ [-Wunused-variable]
  609 |         float currentConcentration;
      |               ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp: In member function ‘void CompuCell3D::KernelDiffusionSolver::diffuse()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:691:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  691 |     for (int idx = 0; idx < numberOfFields; idx++) {
      |                       ~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp: In member function ‘void CompuCell3D::KernelDiffusionSolver::diffuseSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:763:54: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type’ {aka ‘int’} [-Wsign-compare]
  763 |                     for (unsigned int nIdx = 0; nIdx <= tempmaxNeighborIndex[idx]; ++nIdx) {
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:731:27: warning: unused variable ‘concentrationFieldPtr’ [-Wunused-variable]
  731 |     ConcentrationField_t *concentrationFieldPtr = concentrationFieldVector[idx];
      |                           ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp: In member function ‘virtual void CompuCell3D::KernelDiffusionSolver::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:950:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::DiffusionSecretionKernelFieldTupple>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  950 |     for (int i = 0; i < diffSecrFieldTuppleVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘CompuCell3D::Array3DContiguous<T>::Array3DContiguous(CompuCell3D::Dim3D&, T&) [with T = float]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusableVectorCommon.h:77:52:   required from ‘void CompuCell3D::DiffusableVectorCommon<precision, Array_Type>::allocateDiffusableFieldVector(unsigned int, CompuCell3D::Dim3D) [with precision = float; Array_Type = CompuCell3D::Array3DContiguous]’
   77 |                 concentrationFieldVector.push_back(new Array_t(fieldDim, val));
      |                                                    ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:123:34:   required from here
  123 |     allocateDiffusableFieldVector(diffSecrFieldTuppleVec.size(), fieldDim);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:844:13: warning: ‘CompuCell3D::Array3DContiguous<float>::shiftArray’ will be initialized after [-Wreorder]
  844 |         int shiftArray;
      |             ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:843:13: warning:   ‘int CompuCell3D::Array3DContiguous<float>::shiftSwap’ [-Wreorder]
  843 |         int shiftSwap;
      |             ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:742:9: warning:   when initialized here [-Wreorder]
  742 |         Array3DContiguous(Dim3D &_dim, T &_initVal = T()) :
      |         ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp: In member function ‘CompuCell3D::KernelDiffusionSolver::secreteOnContactSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:339:9: warning: ‘contactCellMapMediumPtr’ may be used uninitialized [-Wmaybe-uninitialized]
  339 | #pragma omp parallel
      |         ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.cpp:320:37: note: ‘contactCellMapMediumPtr’ was declared here
  320 |     std::map<unsigned char, float> *contactCellMapMediumPtr;
      |                                     ^~~~~~~~~~~~~~~~~~~~~~~
[199/395] /usr/bin/g++ -DPDESolversShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/FluctuationCompensator.cpp.o -MF core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/FluctuationCompensator.cpp.o.d -o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/FluctuationCompensator.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PixelTracker/PixelTrackerPlugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.h:27,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/bits/stl_tree.h:65,
                 from /usr/include/c++/16/set:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PixelTracker/PixelTracker.h:8,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.h:26:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp: In member function ‘virtual void CompuCell3D::FluctuationCompensator::field3DChange(const CompuCell3D::Point3D&, const CompuCell3D::Point3D&, CompuCell3D::CellG*, CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp:56:54: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
   56 |         for (unsigned int fieldIndex = 0; fieldIndex < numFields; ++fieldIndex)
      |                                           ~~~~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp:61:54: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
   61 |         for (unsigned int fieldIndex = 0; fieldIndex < numFields; ++fieldIndex)
      |                                           ~~~~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp:71:54: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
   71 |         for (unsigned int fieldIndex = 0; fieldIndex < numFields; ++fieldIndex)
      |                                           ~~~~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp:76:54: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
   76 |         for (unsigned int fieldIndex = 0; fieldIndex < numFields; ++fieldIndex)
      |                                           ~~~~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp: In member function ‘virtual void CompuCell3D::FluctuationCompensator::loadFields()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp:95:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   95 |     for (int fieldIdx = 0; fieldIdx < diffusibleFieldNames.size(); ++fieldIdx)
      |                            ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp: In member function ‘virtual void CompuCell3D::FluctuationCompensator::applyCorrections()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp:117:36: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  117 |         for (unsigned int j = 0; j < numFields; ++j)
      |                                  ~~^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp:128:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  128 |     for (unsigned int i = 0; i < numFields; ++i) {
      |                              ~~^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp:155:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  155 |         for (int workerNum = 0; workerNum < numWorkers; ++workerNum) {
      |                                 ~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp:160:49: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::Field3DImpl<float>*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  160 |                 for (int fieldIdx = 0; fieldIdx < diffusibleFields.size(); ++fieldIdx)
      |                                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp:167:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::tuple<CompuCell3D::FluctuationCompensatorCellData*, std::set<CompuCell3D::PixelTrackerData, std::less<CompuCell3D::PixelTrackerData>, std::allocator<CompuCell3D::PixelTrackerData> > > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  167 |         for (int cellIdx = 0; cellIdx < cellDataVec.size(); ++cellIdx) {
      |                               ~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp:184:49: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::Field3DImpl<float>*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  184 |                 for (int fieldIdx = 0; fieldIdx < diffusibleFields.size(); ++fieldIdx)
      |                                        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp: In member function ‘std::vector<float> CompuCell3D::FluctuationCompensator::totalPixelSetConcentration(std::vector<CompuCell3D::Point3D>)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp:272:50: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  272 |         for (unsigned int vecIndex = 0; vecIndex < numFields; ++vecIndex) {
      |                                         ~~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp: In member function ‘std::vector<float> CompuCell3D::FluctuationCompensator::getConcentrationVec(const CompuCell3D::Point3D&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp:296:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::Field3DImpl<float>*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  296 |     for (int _idx = 0; _idx < diffusibleFields.size(); ++_idx) _res[_idx] = diffusibleFields[_idx]->get(_pt);
      |                        ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp: In member function ‘void CompuCell3D::FluctuationCompensator::setConcentrationVec(const CompuCell3D::Point3D&, std::vector<float>)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp:301:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::Field3DImpl<float>*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  301 |     for (int _idx = 0; _idx < diffusibleFields.size(); ++_idx) diffusibleFields[_idx]->set(_pt, _vec[_idx]);
      |                        ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp: In member function ‘CompuCell3D::FluctuationCompensator::getFluctuationCompensatorCellData(CompuCell3D::CellG*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp:291:12: warning: ‘cData’ may be used uninitialized [-Wmaybe-uninitialized]
  291 |     return cData;
      |            ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.cpp:281:37: note: ‘cData’ was declared here
  281 |     FluctuationCompensatorCellData *cData;
      |                                     ^~~~~
[200/395] /usr/bin/gcc -DPDESolversShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -Wno-error=implicit-function-declaration -Wno-error=int-conversion -Wno-error=incompatible-pointer-types -fopenmp  -DNDEBUG -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/HW3CRT.c.o -MF core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/HW3CRT.c.o.d -o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/HW3CRT.c.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/HW3CRT.c
[201/395] /usr/bin/g++ -DPDESolversShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/FlexibleReactionDiffusionSolverFE.cpp.o -MF core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/FlexibleReactionDiffusionSolverFE.cpp.o.d -o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/FlexibleReactionDiffusionSolverFE.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /usr/include/c++/16/bits/locale_classes.h:43,
                 from /usr/include/c++/16/bits/ios_base.h:43,
                 from /usr/include/c++/16/ios:46,
                 from /usr/include/c++/16/bits/ostream.h:43,
                 from /usr/include/c++/16/ostream:42,
                 from /usr/include/c++/16/iostream:43,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3DExceptions.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:6:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:33:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp: In member function ‘virtual void CompuCell3D::FlexibleReactionDiffusionSolverSerializer::serialize()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp:39:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::FlexibleDiffusionSecretionRDFieldTupple>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   39 |     for (int i = 0; i < solverPtr->diffSecrFieldTuppleVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp: In member function ‘virtual void CompuCell3D::FlexibleReactionDiffusionSolverSerializer::readFromFile()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp:53:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::FlexibleDiffusionSecretionRDFieldTupple>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   53 |         for (int i = 0; i < solverPtr->diffSecrFieldTuppleVec.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DContiguous<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp:152:47:   required from here
  152 |     workFieldDim = concentrationFieldVector[0]->getInternalDim();
      |                                               ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:125:23: warning: ‘CompuCell3D::Dim3D CompuCell3D::Field3DImpl<T>::getDim() const [with T = float]’ was hidden [-Woverloaded-virtual=]
  125 |         virtual Dim3D getDim() const { return dim; }
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:823:15: note:   by ‘CompuCell3D::Dim3D CompuCell3D::Array3DContiguous<T>::getDim() [with T = float]’
  823 |         Dim3D getDim() { return Field3DImpl<T>::dim; }
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:926:10: note:   by ‘void CompuCell3D::Array3DContiguous<T>::setDim(CompuCell3D::Dim3D) [with T = float]’
  926 |     void Array3DContiguous<T>::setDim(const Dim3D newDim) {
      |          ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp: In member function ‘void CompuCell3D::FlexibleReactionDiffusionSolverFE::secreteOnContactSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp:409:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  409 |                         for (int i = 0; i <= maxNeighborIndex/*offsetVec.size()*/ ; ++i) {
      |                                         ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp:438:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  438 |                             for (int i = 0; i <= maxNeighborIndex/*offsetVec.size() */; ++i) {
      |                                             ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp: In member function ‘void CompuCell3D::FlexibleReactionDiffusionSolverFE::secreteConstantConcentrationSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp:694:15: warning: unused variable ‘currentConcentration’ [-Wunused-variable]
  694 |         float currentConcentration;
      |               ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp: In member function ‘void CompuCell3D::FlexibleReactionDiffusionSolverFE::solveRDEquations()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp:1062:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1062 |     for (int idx = 0; idx < numberOfFields; ++idx) {
      |                       ~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp:1066:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1066 |     for (int fieldIdx = 0; fieldIdx < numberOfFields; ++fieldIdx) {
      |                            ~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp: In member function ‘void CompuCell3D::FlexibleReactionDiffusionSolverFE::solveRDEquationsSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp:1215:57: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1215 |                         for (int fieldIdx = 0; fieldIdx < numberOfFields; ++fieldIdx) {
      |                                                ~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp:1257:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1257 |                         for (int i = 0; i <= maxNeighborIndex /*offsetVec.size()*/ ; ++i) {
      |                                         ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp:1169:16: warning: unused variable ‘neighborCellPtr’ [-Wunused-variable]
 1169 |         CellG *neighborCellPtr = 0;
      |                ^~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp:1119:27: warning: unused variable ‘concentrationFieldPtr’ [-Wunused-variable]
 1119 |     ConcentrationField_t *concentrationFieldPtr = concentrationFieldVector[idx];
      |                           ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp: In member function ‘void CompuCell3D::FlexibleReactionDiffusionSolverFE::diffuse()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp:1316:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1316 |     for (int idx = 0; idx < extraTimesPerMCS + 1; ++idx) {
      |                       ~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp: In member function ‘virtual void CompuCell3D::FlexibleReactionDiffusionSolverFE::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp:1644:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::FlexibleDiffusionSecretionRDFieldTupple>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1644 |     for (int i = 0; i < diffSecrFieldTuppleVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘CompuCell3D::Array3DContiguous<T>::Array3DContiguous(CompuCell3D::Dim3D&, T&) [with T = float]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusableVectorCommon.h:77:52:   required from ‘void CompuCell3D::DiffusableVectorCommon<precision, Array_Type>::allocateDiffusableFieldVector(unsigned int, CompuCell3D::Dim3D) [with precision = float; Array_Type = CompuCell3D::Array3DContiguous]’
   77 |                 concentrationFieldVector.push_back(new Array_t(fieldDim, val));
      |                                                    ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp:151:34:   required from here
  151 |     allocateDiffusableFieldVector(diffSecrFieldTuppleVec.size(), fieldDim);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:844:13: warning: ‘CompuCell3D::Array3DContiguous<float>::shiftArray’ will be initialized after [-Wreorder]
  844 |         int shiftArray;
      |             ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:843:13: warning:   ‘int CompuCell3D::Array3DContiguous<float>::shiftSwap’ [-Wreorder]
  843 |         int shiftSwap;
      |             ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:742:9: warning:   when initialized here [-Wreorder]
  742 |         Array3DContiguous(Dim3D &_dim, T &_initVal = T()) :
      |         ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp: In member function ‘CompuCell3D::FlexibleReactionDiffusionSolverFE::secreteOnContactSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp:366:9: warning: ‘contactCellMapMediumPtr’ may be used uninitialized [-Wmaybe-uninitialized]
  366 | #pragma omp parallel
      |         ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.cpp:326:37: note: ‘contactCellMapMediumPtr’ was declared here
  326 |     std::map<unsigned char, float> *contactCellMapMediumPtr;
      |                                     ^~~~~~~~~~~~~~~~~~~~~~~
[202/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/steppables/BoxWatcher/libCC3DBoxWatcher.so.4.9.0  core/CompuCell3D/steppables/BoxWatcher/libCC3DBoxWatcher.so.4.9 core/CompuCell3D/steppables/BoxWatcher/libCC3DBoxWatcher.so && :
[203/395] /usr/bin/g++ -DPDESolversShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/ReactionDiffusionSolverFE.cpp.o -MF core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/ReactionDiffusionSolverFE.cpp.o.d -o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/ReactionDiffusionSolverFE.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /usr/include/c++/16/bits/locale_classes.h:43,
                 from /usr/include/c++/16/bits/ios_base.h:43,
                 from /usr/include/c++/16/ios:46,
                 from /usr/include/c++/16/bits/ostream.h:43,
                 from /usr/include/c++/16/ostream:42,
                 from /usr/include/c++/16/iostream:43,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3DExceptions.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:6:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:33:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp: In member function ‘virtual void CompuCell3D::ReactionDiffusionSolverSerializer::serialize()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:40:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::DiffusionSecretionRDFieldTupple>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   40 |     for (int i = 0; i < solverPtr->diffSecrFieldTuppleVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp: In member function ‘virtual void CompuCell3D::ReactionDiffusionSolverSerializer::readFromFile()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:54:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::DiffusionSecretionRDFieldTupple>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   54 |         for (int i = 0; i < solverPtr->diffSecrFieldTuppleVec.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<signed char>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:952:11:   required from ‘class CompuCell3D::Array3DCUDA<signed char>’
  952 |     class Array3DCUDA : public Field3DImpl<T> {
      |           ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:97:16:   required from here
   97 |         delete bc_indicator_field;
      |                ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = signed char]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = signed char]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DCUDA<signed char>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:97:16:   required from here
   97 |         delete bc_indicator_field;
      |                ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:125:23: warning: ‘CompuCell3D::Dim3D CompuCell3D::Field3DImpl<T>::getDim() const [with T = signed char]’ was hidden [-Woverloaded-virtual=]
  125 |         virtual Dim3D getDim() const { return dim; }
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:1029:15: note:   by ‘CompuCell3D::Dim3D CompuCell3D::Array3DCUDA<T>::getDim() [with T = signed char]’
 1029 |         Dim3D getDim() { return Field3DImpl<T>::dim; }
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DContiguous<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:290:47:   required from here
  290 |     workFieldDim = concentrationFieldVector[0]->getInternalDim();
      |                                               ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:125:23: warning: ‘CompuCell3D::Dim3D CompuCell3D::Field3DImpl<T>::getDim() const [with T = float]’ was hidden [-Woverloaded-virtual=]
  125 |         virtual Dim3D getDim() const { return dim; }
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:823:15: note:   by ‘CompuCell3D::Dim3D CompuCell3D::Array3DContiguous<T>::getDim() [with T = float]’
  823 |         Dim3D getDim() { return Field3DImpl<T>::dim; }
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:926:10: note:   by ‘void CompuCell3D::Array3DContiguous<T>::setDim(CompuCell3D::Dim3D) [with T = float]’
  926 |     void Array3DContiguous<T>::setDim(const Dim3D newDim) {
      |          ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<unsigned char>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:952:11:   required from ‘class CompuCell3D::Array3DCUDA<unsigned char>’
  952 |     class Array3DCUDA : public Field3DImpl<T> {
      |           ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:348:37:   required from here
  348 |                     h_celltype_field->set(pt, cell->type);
      |                                     ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = unsigned char]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = unsigned char]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DCUDA<unsigned char>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:348:37:   required from here
  348 |                     h_celltype_field->set(pt, cell->type);
      |                                     ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:125:23: warning: ‘CompuCell3D::Dim3D CompuCell3D::Field3DImpl<T>::getDim() const [with T = unsigned char]’ was hidden [-Woverloaded-virtual=]
  125 |         virtual Dim3D getDim() const { return dim; }
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:1029:15: note:   by ‘CompuCell3D::Dim3D CompuCell3D::Array3DCUDA<T>::getDim() [with T = unsigned char]’
 1029 |         Dim3D getDim() { return Field3DImpl<T>::dim; }
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DCUDA<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:349:35:   required from here
  349 |                     h_cellid_field->set(pt, cell->id);
      |                                   ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:125:23: warning: ‘CompuCell3D::Dim3D CompuCell3D::Field3DImpl<T>::getDim() const [with T = float]’ was hidden [-Woverloaded-virtual=]
  125 |         virtual Dim3D getDim() const { return dim; }
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:1029:15: note:   by ‘CompuCell3D::Dim3D CompuCell3D::Array3DCUDA<T>::getDim() [with T = float]’
 1029 |         Dim3D getDim() { return Field3DImpl<T>::dim; }
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp: In member function ‘virtual void CompuCell3D::ReactionDiffusionSolverFE::step(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:754:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  754 |             for (int idx = 0; idx < numberOfFields; ++idx) {
      |                               ~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:768:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  768 |             for (int idx = 0; idx < numberOfFields; ++idx) {
      |                               ~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:773:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  773 |             for (int fieldIdx = 0; fieldIdx < numberOfFields; ++fieldIdx) {
      |                                    ~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:783:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  783 |         for (int idx = 0; idx < numberOfFields; ++idx) {
      |                           ~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:792:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  792 |             for (int idx = 0; idx < numberOfFields; ++idx) {
      |                               ~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:799:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  799 |             for (int fieldIdx = 0; fieldIdx < numberOfFields; ++fieldIdx) {
      |                                    ~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp: In member function ‘void CompuCell3D::ReactionDiffusionSolverFE::secreteOnContactSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:912:43: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  912 |                         for (int i = 0; i <= maxNeighborIndex/*offsetVec.size()*/; ++i) {
      |                                         ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:941:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  941 |                             for (int i = 0; i <= maxNeighborIndex/*offsetVec.size() */; ++i) {
      |                                             ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp: In member function ‘void CompuCell3D::ReactionDiffusionSolverFE::secreteConstantConcentrationSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1189:15: warning: unused variable ‘currentConcentration’ [-Wunused-variable]
 1189 |         float currentConcentration;
      |               ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp: In member function ‘void CompuCell3D::ReactionDiffusionSolverFE::solveRDEquations()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1553:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1553 |     for (int idx = 0; idx < numberOfFields; ++idx) {
      |                       ~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1557:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1557 |     for (int fieldIdx = 0; fieldIdx < numberOfFields; ++fieldIdx) {
      |                            ~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp: In member function ‘void CompuCell3D::ReactionDiffusionSolverFE::solveRDEquationsSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1726:61: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1726 |                             for (int fieldIdx = 0; fieldIdx < numberOfFields; ++fieldIdx) {
      |                                                    ~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1735:51: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
 1735 |                                 for (register int i = 0; i <= maxNeighborIndex /*offsetVec.size()*/; ++i) {
      |                                                   ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1735:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1735 |                                 for (register int i = 0; i <= maxNeighborIndex /*offsetVec.size()*/; ++i) {
      |                                                          ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1764:55: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
 1764 |                                     for (register int i = 0; i <= maxNeighborIndex; ++i) {
      |                                                       ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1764:64: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1764 |                                     for (register int i = 0; i <= maxNeighborIndex; ++i) {
      |                                                              ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1780:51: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
 1780 |                                 for (register int i = 0; i <= maxNeighborIndex /*offsetVec.size()*/; ++i) {
      |                                                   ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1780:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1780 |                                 for (register int i = 0; i <= maxNeighborIndex /*offsetVec.size()*/; ++i) {
      |                                                          ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1847:55: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
 1847 |                                     for (register int i = 0; i <= maxNeighborIndex; ++i) {
      |                                                       ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1847:64: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1847 |                                     for (register int i = 0; i <= maxNeighborIndex; ++i) {
      |                                                              ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1924:61: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1924 |                             for (int fieldIdx = 0; fieldIdx < numberOfFields; ++fieldIdx) {
      |                                                    ~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1932:51: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
 1932 |                                 for (register int i = 0; i <= maxNeighborIndex /*offsetVec.size()*/; ++i) {
      |                                                   ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1932:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1932 |                                 for (register int i = 0; i <= maxNeighborIndex /*offsetVec.size()*/; ++i) {
      |                                                          ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1962:51: warning: ISO C++17 does not allow ‘register’ storage class specifier [-Wregister]
 1962 |                                 for (register int i = 0; i <= maxNeighborIndex; ++i) {
      |                                                   ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1962:60: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 1962 |                                 for (register int i = 0; i <= maxNeighborIndex; ++i) {
      |                                                          ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1660:16: warning: unused variable ‘currentCellPtr’ [-Wunused-variable]
 1660 |         CellG *currentCellPtr = 0;
      |                ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1665:15: warning: unused variable ‘neighborCounter’ [-Wunused-variable]
 1665 |         short neighborCounter = 0;
      |               ^~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1666:16: warning: unused variable ‘neighborCellPtr’ [-Wunused-variable]
 1666 |         CellG *neighborCellPtr = 0;
      |                ^~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1599:11: warning: unused variable ‘dt_dx2’ [-Wunused-variable]
 1599 |     float dt_dx2 = deltaT / (deltaX * deltaX);
      |           ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1610:27: warning: unused variable ‘concentrationFieldPtr’ [-Wunused-variable]
 1610 |     ConcentrationField_t *concentrationFieldPtr = concentrationFieldVector[idx];
      |                           ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:1623:10: warning: variable ‘avoidMedium’ set but not used [-Wunused-but-set-variable=]
 1623 |     bool avoidMedium = false;
      |          ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp: In member function ‘void CompuCell3D::ReactionDiffusionSolverFE::diffuse()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:2010:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
 2010 |     for (int idx = 0; idx < extraTimesPerMCS + 1; ++idx) {
      |                       ~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp: In member function ‘virtual void CompuCell3D::ReactionDiffusionSolverFE::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:2269:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::DiffusionSecretionRDFieldTupple>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 2269 |     for (int i = 0; i < diffSecrFieldTuppleVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘CompuCell3D::Array3DContiguous<T>::Array3DContiguous(CompuCell3D::Dim3D&, T&) [with T = float]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/DiffusableVectorCommon.h:77:52:   required from ‘void CompuCell3D::DiffusableVectorCommon<precision, Array_Type>::allocateDiffusableFieldVector(unsigned int, CompuCell3D::Dim3D) [with precision = float; Array_Type = CompuCell3D::Array3DContiguous]’
   77 |                 concentrationFieldVector.push_back(new Array_t(fieldDim, val));
      |                                                    ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:289:34:   required from here
  289 |     allocateDiffusableFieldVector(diffSecrFieldTuppleVec.size(), fieldDim);
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:844:13: warning: ‘CompuCell3D::Array3DContiguous<float>::shiftArray’ will be initialized after [-Wreorder]
  844 |         int shiftArray;
      |             ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:843:13: warning:   ‘int CompuCell3D::Array3DContiguous<float>::shiftSwap’ [-Wreorder]
  843 |         int shiftSwap;
      |             ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:742:9: warning:   when initialized here [-Wreorder]
  742 |         Array3DContiguous(Dim3D &_dim, T &_initVal = T()) :
      |         ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp: In member function ‘CompuCell3D::ReactionDiffusionSolverFE::secreteOnContactSingleField(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:870:9: warning: ‘contactCellMapMediumPtr’ may be used uninitialized [-Wmaybe-uninitialized]
  870 | #pragma omp parallel
      |         ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.cpp:830:37: note: ‘contactCellMapMediumPtr’ was declared here
  830 |     std::map<unsigned char, float> *contactCellMapMediumPtr;
      |                                     ^~~~~~~~~~~~~~~~~~~~~~~
[204/395] /usr/bin/gcc -DPDESolversShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -Wno-error=implicit-function-declaration -Wno-error=int-conversion -Wno-error=incompatible-pointer-types -fopenmp  -DNDEBUG -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/HWSCRT.c.o -MF core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/HWSCRT.c.o.d -o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/HWSCRT.c.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/HWSCRT.c
[205/395] /usr/bin/cmake -E cmake_symlink_library core/pyinterface/PlayerPythonNew/libFieldExtractor.so.4.9.0  core/pyinterface/PlayerPythonNew/libFieldExtractor.so.4.9 core/pyinterface/PlayerPythonNew/libFieldExtractor.so && :
[206/395] /usr/bin/g++ -DMitosisSteppableShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/Mitosis/CMakeFiles/MitosisSteppableShared.dir/MitosisSteppableProxy.cpp.o -MF core/CompuCell3D/steppables/Mitosis/CMakeFiles/MitosisSteppableShared.dir/MitosisSteppableProxy.cpp.o.d -o core/CompuCell3D/steppables/Mitosis/CMakeFiles/MitosisSteppableShared.dir/MitosisSteppableProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppableProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppableProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[207/395] /usr/bin/g++ -DPyPlugin_EXPORTS -DVTK9 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/usr/include/python3.14 -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/PyPlugin.cpp.o -MF core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/PyPlugin.cpp.o.d -o core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/PyPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/PyPlugin.cpp
[208/395] /usr/bin/g++ -DPyPlugin_EXPORTS -DVTK9 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/usr/include/python3.14 -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/PyCompuCellObjAdapter.cpp.o -MF core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/PyCompuCellObjAdapter.cpp.o.d -o core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/PyCompuCellObjAdapter.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/PyCompuCellObjAdapter.cpp
In file included from /usr/include/python3.14/pyconfig.h:6,
                 from /usr/include/python3.14/Python.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/PyCompuCellObjAdapter.h:8,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/PyCompuCellObjAdapter.cpp:1:
/usr/include/python3.14/pyconfig-64.h:2007:9: warning: ‘_POSIX_C_SOURCE’ redefined
 2007 | #define _POSIX_C_SOURCE 200809L
      |         ^~~~~~~~~~~~~~~
In file included from /usr/include/c++/16/aarch64-redhat-linux/bits/os_defines.h:39,
                 from /usr/include/c++/16/aarch64-redhat-linux/bits/c++config.h:733,
                 from /usr/include/c++/16/cstdint:40,
                 from <command-line>:
/usr/include/features.h:319:10: note: this is the location of the previous definition
  319 | # define _POSIX_C_SOURCE        202405L
      |          ^~~~~~~~~~~~~~~
/usr/include/python3.14/pyconfig-64.h:2043:9: warning: ‘_XOPEN_SOURCE’ redefined
 2043 | #define _XOPEN_SOURCE 700
      |         ^~~~~~~~~~~~~
/usr/include/features.h:234:10: note: this is the location of the previous definition
  234 | # define _XOPEN_SOURCE  800
      |          ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/PyCompuCellObjAdapter.h:4:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/PyCompuCellObjAdapter.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[209/395] /usr/bin/g++ -DMitosisSteppableShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/Mitosis/CMakeFiles/MitosisSteppableShared.dir/MitosisSteppable.cpp.o -MF core/CompuCell3D/steppables/Mitosis/CMakeFiles/MitosisSteppableShared.dir/MitosisSteppable.cpp.o.d -o core/CompuCell3D/steppables/Mitosis/CMakeFiles/MitosisSteppableShared.dir/MitosisSteppable.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp: In member function ‘CompuCell3D::SteppableOrientationVectorsMitosis CompuCell3D::MitosisSteppable::getOrientationVectorsMitosisCompartments(long int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp:185:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::CellG*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  185 |     for (int i = 0; i < compartmentsVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp: In member function ‘CompuCell3D::SteppableOrientationVectorsMitosis CompuCell3D::MitosisSteppable::getOrientationVectorsMitosis2D_xy(std::set<CompuCell3D::PixelTrackerData>&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp:220:12: warning: unused variable ‘zcm’ [-Wunused-variable]
  220 |     double zcm = clusterCOM.fZ;
      |            ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp:239:12: warning: unused variable ‘lMin’ [-Wunused-variable]
  239 |     double lMin = 0.5 * (inertiaTensor[0][0] + inertiaTensor[1][1]) - radical;
      |            ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp: In member function ‘CompuCell3D::SteppableOrientationVectorsMitosis CompuCell3D::MitosisSteppable::getOrientationVectorsMitosis2D_xz(std::set<CompuCell3D::PixelTrackerData>&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp:269:12: warning: unused variable ‘ycm’ [-Wunused-variable]
  269 |     double ycm = clusterCOM.fY;
      |            ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp:288:12: warning: unused variable ‘lMin’ [-Wunused-variable]
  288 |     double lMin = 0.5 * (inertiaTensor[0][0] + inertiaTensor[1][1]) - radical;
      |            ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp: In member function ‘CompuCell3D::SteppableOrientationVectorsMitosis CompuCell3D::MitosisSteppable::getOrientationVectorsMitosis2D_yz(std::set<CompuCell3D::PixelTrackerData>&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp:317:12: warning: unused variable ‘xcm’ [-Wunused-variable]
  317 |     double xcm = clusterCOM.fX;
      |            ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp:337:12: warning: unused variable ‘lMin’ [-Wunused-variable]
  337 |     double lMin = 0.5 * (inertiaTensor[0][0] + inertiaTensor[1][1]) - radical;
      |            ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp: In member function ‘bool CompuCell3D::MitosisSteppable::doDirectionalMitosisOrientationVectorBased(CompuCell3D::CellG*, double, double, double)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp:590:13: warning: variable ‘parentCellVolume’ set but not used [-Wunused-but-set-variable=]
  590 |         int parentCellVolume=0;
      |             ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp: In member function ‘bool CompuCell3D::MitosisSteppable::doDirectionalMitosisOrientationVectorBasedCompartments(long int, double, double, double)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp:804:10: warning: unused variable ‘clusterDivideFlag’ [-Wunused-variable]
  804 |     bool clusterDivideFlag = divideClusterPixelsOrientationVectorBased(*pixelsToDividePtr, clusterParent, clusterChild,
      |          ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp:898:10: warning: unused variable ‘childClusterId’ [-Wunused-variable]
  898 |     long childClusterId = 0;
      |          ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp: In member function ‘void CompuCell3D::MitosisSteppable::initializeClusters(std::vector<int>&, std::set<CompuCell3D::PixelTrackerData>&, std::vector<CompuCell3D::CompartmentMitosisData>&, std::vector<double>&, std::vector<CompuCell3D::CompartmentMitosisData>&, Vector3)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp:997:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::CompartmentMitosisData>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  997 |         for (int i = 0; i < clusterKernelsVec.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp:1009:62: warning: comparison of integer expressions of different signedness: ‘std::set<CompuCell3D::PixelTrackerData>::size_type’ {aka ‘long unsigned int’} and ‘__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type’ {aka ‘int’} [-Wsign-compare]
 1009 |             if (compartmentPixelsVector[mitr->second].size() < originalCompartmentVolumeVec[mitr->second] / 2) {
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp:1041:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::CompartmentMitosisData>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1041 |     for (int i = 0; i < clusterKernels.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp:1074:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::set<CompuCell3D::PixelTrackerData> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1074 |     for (int i = 0; i < compartmentPixelsVector.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp: In member function ‘bool CompuCell3D::MitosisSteppable::divideClusterPixelsOrientationVectorBased(std::set<CompuCell3D::PixelTrackerData>&, std::set<CompuCell3D::PixelTrackerData>&, std::set<CompuCell3D::PixelTrackerData>&, double, double, double)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/Mitosis/MitosisSteppable.cpp:1268:9: warning: unused variable ‘parentCellVolume’ [-Wunused-variable]
 1268 |     int parentCellVolume = 0;
      |         ^~~~~~~~~~~~~~~~
[210/395] /usr/bin/g++ -DPyPlugin_EXPORTS -DVTK9 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/usr/include/python3.14 -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/EnergyFunctionPyWrapper.cpp.o -MF core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/EnergyFunctionPyWrapper.cpp.o.d -o core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/EnergyFunctionPyWrapper.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/EnergyFunctionPyWrapper.cpp
In file included from /usr/include/python3.14/pyconfig.h:6,
                 from /usr/include/python3.14/Python.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/PyCompuCellObjAdapter.h:8,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/EnergyFunctionPyWrapper.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/EnergyFunctionPyWrapper.cpp:1:
/usr/include/python3.14/pyconfig-64.h:2007:9: warning: ‘_POSIX_C_SOURCE’ redefined
 2007 | #define _POSIX_C_SOURCE 200809L
      |         ^~~~~~~~~~~~~~~
In file included from /usr/include/c++/16/aarch64-redhat-linux/bits/os_defines.h:39,
                 from /usr/include/c++/16/aarch64-redhat-linux/bits/c++config.h:733,
                 from /usr/include/c++/16/cstdint:40,
                 from <command-line>:
/usr/include/features.h:319:10: note: this is the location of the previous definition
  319 | # define _POSIX_C_SOURCE        202405L
      |          ^~~~~~~~~~~~~~~
/usr/include/python3.14/pyconfig-64.h:2043:9: warning: ‘_XOPEN_SOURCE’ redefined
 2043 | #define _XOPEN_SOURCE 700
      |         ^~~~~~~~~~~~~
/usr/include/features.h:234:10: note: this is the location of the previous definition
  234 | # define _XOPEN_SOURCE  800
      |          ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/EnergyFunction.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/EnergyFunctionPyWrapper.h:4:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/EnergyFunctionPyWrapper.cpp: In member function ‘virtual double CompuCell3D::EnergyFunctionPyWrapper::changeEnergy(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/EnergyFunctionPyWrapper.cpp:52:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<_object*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   52 |    for (int i = 0 ; i < vecPyObject.size() ; ++i){
      |                     ~~^~~~~~~~~~~~~~~~~~~~
[211/395] /usr/bin/g++ -DPDESolversShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/ReactionDiffusionSolverFVM.cpp.o -MF core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/ReactionDiffusionSolverFVM.cpp.o.d -o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/ReactionDiffusionSolverFVM.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /usr/include/c++/16/bits/locale_classes.h:43,
                 from /usr/include/c++/16/bits/ios_base.h:43,
                 from /usr/include/c++/16/ios:46,
                 from /usr/include/c++/16/bits/ostream.h:43,
                 from /usr/include/c++/16/ostream:42,
                 from /usr/include/c++/16/iostream:43,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3DExceptions.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:6:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:33:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DBordersField3DAdapter<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:150:26:   required from here
  150 |         class PDESOLVERS_EXPORT ReactionDiffusionSolverFVM :public DiffusableVector<float>
      |                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:515:18: note:   by ‘void CompuCell3D::Array3DBordersField3DAdapter<T>::setDim(CompuCell3D::Dim3D) [with T = float]’
  515 |     virtual void setDim(const Dim3D theDim) {
      |                  ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:31:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h: In member function ‘bool CompuCell3D::ReactionDiffusionSolverFVM::isValid(CompuCell3D::Point3D)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:1164:84: warning: catching polymorphic type ‘class CompuCell3D::CC3DException’ by value [-Wcatch-value=]
 1164 |                 bool isValid(Point3D pt) { try { pt2ind(pt); return true; } catch (CC3DException) { return false; } }
      |                                                                                    ^~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h: In constructor ‘CompuCell3D::ReactionDiffusionSolverFVM::ReactionDiffusionSolverFVM()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:225:23: warning: ‘CompuCell3D::ReactionDiffusionSolverFVM::lengthX’ will be initialized after [-Wreorder]
  225 |                 float lengthX;
      |                       ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:222:24: warning:   ‘double CompuCell3D::ReactionDiffusionSolverFVM::incTime’ [-Wreorder]
  222 |                 double incTime;
      |                        ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:34:1: warning:   when initialized here [-Wreorder]
   34 | ReactionDiffusionSolverFVM::ReactionDiffusionSolverFVM()
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp: In member function ‘virtual void CompuCell3D::ReactionDiffusionSolverFVM::handleEvent(CompuCell3D::CC3DEvent&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:680:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ReactionDiffusionSolverFV*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  680 |                 for (int i=0;i<fvs.size();i++){
      |                              ~^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:672:23: warning: variable ‘fieldDimOld’ set but not used [-Wunused-but-set-variable=]
  672 |                 Dim3D fieldDimOld = fieldDim;
      |                       ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp: In member function ‘virtual void CompuCell3D::ReactionDiffusionSolverFVM::step(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:730:42: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ReactionDiffusionSolverFV*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  730 |                         for(int i = 0; i < _fieldFVs.size(); i++)
      |                                        ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:750:42: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ReactionDiffusionSolverFV*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  750 |                         for(int i = 0; i < _fieldFVs.size(); i++)
      |                                        ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:756:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ReactionDiffusionSolverFV*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  756 |                         for (int i=0;i< _fieldFVs.size();i++){
      |                                      ~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:767:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ReactionDiffusionSolverFV*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  767 |                 for (int i=0;i<_fieldFVs.size();i++){
      |                              ~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp: In member function ‘void CompuCell3D::ReactionDiffusionSolverFVM::loadFieldExpressionMultiplier(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:831:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ReactionDiffusionSolverFV*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  831 |         for (int i=0;i<_fieldFVs.size();i++){
      |                      ~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp: In member function ‘void CompuCell3D::ReactionDiffusionSolverFVM::loadFieldExpressionIndependent(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:844:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ReactionDiffusionSolverFV*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  844 |         for (int i=0;i<_fieldFVs.size();i++){
      |                      ~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp: In member function ‘void CompuCell3D::ReactionDiffusionSolverFVM::initializeFVs(CompuCell3D::Dim3D)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:881:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ReactionDiffusionSolverFV*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  881 |         for (int i=0;i< _fieldFVs.size();i++){
      |                      ~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:887:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ReactionDiffusionSolverFV*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  887 |         for (int i=0;i<_fieldFVs.size();i++){
      |                      ~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:888:41: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  888 |         for (int fieldIndex=0;fieldIndex<_fieldFVs[i]->getConcentrationVec().size();++fieldIndex){
      |                               ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp: In member function ‘void CompuCell3D::ReactionDiffusionSolverFVM::useConstantDiffusivity(unsigned int, double)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:1020:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ReactionDiffusionSolverFV*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1020 |         for (int i=0;i<_fieldFVs.size();i++){
      |                      ~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp: In member function ‘void CompuCell3D::ReactionDiffusionSolverFVM::useConstantDiffusivityByType(unsigned int, double)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:1027:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ReactionDiffusionSolverFV*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1027 |         for (int i=0;i<_fieldFVs.size();i++){
      |                      ~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp: In member function ‘void CompuCell3D::ReactionDiffusionSolverFVM::useFieldDiffusivityInMedium(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:1035:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ReactionDiffusionSolverFV*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1035 |         for (int i=0;i<_fieldFVs.size();i++){
      |                      ~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp: In member function ‘void CompuCell3D::ReactionDiffusionSolverFVM::useFieldDiffusivityEverywhere(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:1043:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ReactionDiffusionSolverFV*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1043 |         for (int i=0;i<_fieldFVs.size();i++){
      |                      ~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp: In member function ‘void CompuCell3D::ReactionDiffusionSolverFVM::useDiffusiveSurfaces(unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:1084:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ReactionDiffusionSolverFV*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1084 |         for (int i=0;i<_fieldFVs.size();i++){
      |                      ~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp: In member function ‘void CompuCell3D::ReactionDiffusionSolverFVM::usePermeableSurfaces(unsigned int, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:1096:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ReactionDiffusionSolverFV*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1096 |         for (int i=0;i<_fieldFVs.size();i++){
      |                      ~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp: In member function ‘double CompuCell3D::ReactionDiffusionSolverFVM::getCellDiffusivityCoefficient(const CompuCell3D::CellG*, unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:1144:38: warning: unused variable ‘diffusivityCoefficients’ [-Wunused-variable]
 1144 |                 std::vector<double> &diffusivityCoefficients = cellData->diffusivityCoefficients;
      |                                      ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp: In member function ‘void CompuCell3D::ReactionDiffusionSolverFVM::setCellOutwardFlux(const CompuCell3D::CellG*, unsigned int, float)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:1291:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ReactionDiffusionSolverFV*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1291 |         for(int i = 0; i < _fieldFVs.size(); i++) {
      |                        ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp: In member function ‘void CompuCell3D::ReactionDiffusionSolverFVM::setUnitsTime(std::string)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:1333:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1333 |                 for (int i = 0; i < availableUnitsTime.size(); ++i) {
      |                                 ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp: In member function ‘virtual void CompuCell3D::ReactionDiffusionSolverFVM::setLengths(float, float, float)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:1350:49: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
 1350 |         for (int surfaceIndex = 0; surfaceIndex < surfaceNormSign.size(); ++surfaceIndex) {
      |                                    ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h: In constructor ‘CompuCell3D::ReactionDiffusionSolverFV::ReactionDiffusionSolverFV(CompuCell3D::ReactionDiffusionSolverFVM*, CompuCell3D::Point3D, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:1495:22: warning: ‘CompuCell3D::ReactionDiffusionSolverFV::usingCellInterfaceFlux’ will be initialized after [-Wreorder]
 1495 |                 bool usingCellInterfaceFlux;
      |                      ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:1486:45: warning:   ‘CompuCell3D::ReactionDiffusionSolverFVM* CompuCell3D::ReactionDiffusionSolverFV::solver’ [-Wreorder]
 1486 |                 ReactionDiffusionSolverFVM *solver;
      |                                             ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:1414:1: warning:   when initialized here [-Wreorder]
 1414 | ReactionDiffusionSolverFV::ReactionDiffusionSolverFV(ReactionDiffusionSolverFVM *_solver, Point3D _coords, int _numFields) :
      | ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp: In member function ‘double CompuCell3D::ReactionDiffusionSolverFV::solveStable()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:1493:16: warning: variable ‘cell’ set but not used [-Wunused-but-set-variable=]
 1493 |         CellG *cell;
      |                ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp: In member function ‘CompuCell3D::ReactionDiffusionSolverFV::solve()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:1483:84: warning: ‘cell’ may be used uninitialized [-Wmaybe-uninitialized]
 1483 |                                         concentrationVecAux[i] += cellInterfaceFlux(i, fv_itr->first, cell, nbsCells[fv_itr->first]);
      |                                                                   ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.cpp:1463:16: note: ‘cell’ was declared here
 1463 |         CellG *cell;
      |                ^~~~
[212/395] /usr/bin/g++ -DPyPlugin_EXPORTS -DVTK9 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/usr/include/python3.14 -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/ChangeWatcherPyWrapper.cpp.o -MF core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/ChangeWatcherPyWrapper.cpp.o.d -o core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/ChangeWatcherPyWrapper.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/ChangeWatcherPyWrapper.cpp
In file included from /usr/include/python3.14/pyconfig.h:6,
                 from /usr/include/python3.14/Python.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/PyCompuCellObjAdapter.h:8,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/ChangeWatcherPyWrapper.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/ChangeWatcherPyWrapper.cpp:1:
/usr/include/python3.14/pyconfig-64.h:2007:9: warning: ‘_POSIX_C_SOURCE’ redefined
 2007 | #define _POSIX_C_SOURCE 200809L
      |         ^~~~~~~~~~~~~~~
In file included from /usr/include/c++/16/aarch64-redhat-linux/bits/os_defines.h:39,
                 from /usr/include/c++/16/aarch64-redhat-linux/bits/c++config.h:733,
                 from /usr/include/c++/16/cstdint:40,
                 from <command-line>:
/usr/include/features.h:319:10: note: this is the location of the previous definition
  319 | # define _POSIX_C_SOURCE        202405L
      |          ^~~~~~~~~~~~~~~
/usr/include/python3.14/pyconfig-64.h:2043:9: warning: ‘_XOPEN_SOURCE’ redefined
 2043 | #define _XOPEN_SOURCE 700
      |         ^~~~~~~~~~~~~
/usr/include/features.h:234:10: note: this is the location of the previous definition
  234 | # define _XOPEN_SOURCE  800
      |          ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/CellGChangeWatcher.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/ChangeWatcherPyWrapper.h:4:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/ChangeWatcherPyWrapper.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/ChangeWatcherPyWrapper.cpp: In member function ‘virtual void CompuCell3D::ChangeWatcherPyWrapper::field3DChange(const CompuCell3D::Point3D&, CompuCell3D::CellG*, CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/ChangeWatcherPyWrapper.cpp:54:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<_object*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   54 |    for (int i = 0 ; i < vecPyObject.size() ; ++i){
      |                     ~~^~~~~~~~~~~~~~~~~~~~
[213/395] /usr/bin/g++ -DPyPlugin_EXPORTS -DVTK9 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/usr/include/python3.14 -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/TypeChangeWatcherPyWrapper.cpp.o -MF core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/TypeChangeWatcherPyWrapper.cpp.o.d -o core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/TypeChangeWatcherPyWrapper.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/TypeChangeWatcherPyWrapper.cpp
In file included from /usr/include/python3.14/pyconfig.h:6,
                 from /usr/include/python3.14/Python.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/PyCompuCellObjAdapter.h:8,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/TypeChangeWatcherPyWrapper.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/TypeChangeWatcherPyWrapper.cpp:1:
/usr/include/python3.14/pyconfig-64.h:2007:9: warning: ‘_POSIX_C_SOURCE’ redefined
 2007 | #define _POSIX_C_SOURCE 200809L
      |         ^~~~~~~~~~~~~~~
In file included from /usr/include/c++/16/aarch64-redhat-linux/bits/os_defines.h:39,
                 from /usr/include/c++/16/aarch64-redhat-linux/bits/c++config.h:733,
                 from /usr/include/c++/16/cstdint:40,
                 from <command-line>:
/usr/include/features.h:319:10: note: this is the location of the previous definition
  319 | # define _POSIX_C_SOURCE        202405L
      |          ^~~~~~~~~~~~~~~
/usr/include/python3.14/pyconfig-64.h:2043:9: warning: ‘_XOPEN_SOURCE’ redefined
 2043 | #define _XOPEN_SOURCE 700
      |         ^~~~~~~~~~~~~
/usr/include/features.h:234:10: note: this is the location of the previous definition
  234 | # define _XOPEN_SOURCE  800
      |          ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/TypeChangeWatcher.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/TypeChangeWatcherPyWrapper.h:4:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/TypeChangeWatcherPyWrapper.cpp: In member function ‘virtual void CompuCell3D::TypeChangeWatcherPyWrapper::typeChange(CompuCell3D::CellG*, CompuCell3D::CellG::CellType_t)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/TypeChangeWatcherPyWrapper.cpp:41:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<_object*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   41 |    for (int i = 0 ; i < vecPyObject.size() ; ++i){
      |                     ~~^~~~~~~~~~~~~~~~~~~~
[214/395] /usr/bin/g++ -DPyPlugin_EXPORTS -DVTK9 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/usr/include/python3.14 -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/NeighborFinderParams.cpp.o -MF core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/NeighborFinderParams.cpp.o.d -o core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/NeighborFinderParams.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/NeighborFinderParams.cpp
In file included from /usr/include/python3.14/pyconfig.h:6,
                 from /usr/include/python3.14/Python.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/NeighborFinderParams.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/NeighborFinderParams.cpp:1:
/usr/include/python3.14/pyconfig-64.h:2007:9: warning: ‘_POSIX_C_SOURCE’ redefined
 2007 | #define _POSIX_C_SOURCE 200809L
      |         ^~~~~~~~~~~~~~~
In file included from /usr/include/c++/16/aarch64-redhat-linux/bits/os_defines.h:39,
                 from /usr/include/c++/16/aarch64-redhat-linux/bits/c++config.h:733,
                 from /usr/include/c++/16/cstdint:40,
                 from <command-line>:
/usr/include/features.h:319:10: note: this is the location of the previous definition
  319 | # define _POSIX_C_SOURCE        202405L
      |          ^~~~~~~~~~~~~~~
/usr/include/python3.14/pyconfig-64.h:2043:9: warning: ‘_XOPEN_SOURCE’ redefined
 2043 | #define _XOPEN_SOURCE 700
      |         ^~~~~~~~~~~~~
/usr/include/features.h:234:10: note: this is the location of the previous definition
  234 | # define _XOPEN_SOURCE  800
      |          ^~~~~~~~~~~~~
[215/395] /usr/bin/g++ -DPyPlugin_EXPORTS -DVTK9 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/usr/include/python3.14 -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/StepperPyWrapper.cpp.o -MF core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/StepperPyWrapper.cpp.o.d -o core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/StepperPyWrapper.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/StepperPyWrapper.cpp
In file included from /usr/include/python3.14/pyconfig.h:6,
                 from /usr/include/python3.14/Python.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/PyCompuCellObjAdapter.h:8,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/StepperPyWrapper.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/StepperPyWrapper.cpp:1:
/usr/include/python3.14/pyconfig-64.h:2007:9: warning: ‘_POSIX_C_SOURCE’ redefined
 2007 | #define _POSIX_C_SOURCE 200809L
      |         ^~~~~~~~~~~~~~~
In file included from /usr/include/c++/16/aarch64-redhat-linux/bits/os_defines.h:39,
                 from /usr/include/c++/16/aarch64-redhat-linux/bits/c++config.h:733,
                 from /usr/include/c++/16/cstdint:40,
                 from <command-line>:
/usr/include/features.h:319:10: note: this is the location of the previous definition
  319 | # define _POSIX_C_SOURCE        202405L
      |          ^~~~~~~~~~~~~~~
/usr/include/python3.14/pyconfig-64.h:2043:9: warning: ‘_XOPEN_SOURCE’ redefined
 2043 | #define _XOPEN_SOURCE 700
      |         ^~~~~~~~~~~~~
/usr/include/features.h:234:10: note: this is the location of the previous definition
  234 | # define _XOPEN_SOURCE  800
      |          ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/PyCompuCellObjAdapter.h:4:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/StepperPyWrapper.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/StepperPyWrapper.cpp: In member function ‘virtual void CompuCell3D::StepperPyWrapper::step()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/StepperPyWrapper.cpp:39:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<_object*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   39 |    for (int i = 0 ; i < vecPyObject.size() ; ++i){
      |                     ~~^~~~~~~~~~~~~~~~~~~~
[216/395] /usr/bin/g++ -DPyPlugin_EXPORTS -DVTK9 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/usr/include/python3.14 -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/PyAttributeAdder.cpp.o -MF core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/PyAttributeAdder.cpp.o.d -o core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/PyAttributeAdder.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/PyAttributeAdder.cpp
In file included from /usr/include/python3.14/pyconfig.h:6,
                 from /usr/include/python3.14/Python.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/PyCompuCellObjAdapter.h:8,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/PyAttributeAdder.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/PyAttributeAdder.cpp:1:
/usr/include/python3.14/pyconfig-64.h:2007:9: warning: ‘_POSIX_C_SOURCE’ redefined
 2007 | #define _POSIX_C_SOURCE 200809L
      |         ^~~~~~~~~~~~~~~
In file included from /usr/include/c++/16/aarch64-redhat-linux/bits/os_defines.h:39,
                 from /usr/include/c++/16/aarch64-redhat-linux/bits/c++config.h:733,
                 from /usr/include/c++/16/cstdint:40,
                 from <command-line>:
/usr/include/features.h:319:10: note: this is the location of the previous definition
  319 | # define _POSIX_C_SOURCE        202405L
      |          ^~~~~~~~~~~~~~~
/usr/include/python3.14/pyconfig-64.h:2043:9: warning: ‘_XOPEN_SOURCE’ redefined
 2043 | #define _XOPEN_SOURCE 700
      |         ^~~~~~~~~~~~~
/usr/include/features.h:234:10: note: this is the location of the previous definition
  234 | # define _XOPEN_SOURCE  800
      |          ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/PyCompuCellObjAdapter.h:4:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
[217/395] /usr/bin/g++ -DFMT_SHARED -DSCN_DISABLE_FAST_FLOAT=0 -DSCN_DISABLE_REGEX=0 -DSCN_REGEX_BACKEND=0 -DSerializerDE_EXPORTS -DVTK9 -Dkiss_fft_scalar=double -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface -isystem /usr/include/vtk -isystem /usr/include/vtk/vtkscn/include -isystem /usr/include/vtk/vtkscn -isystem /usr/include/vtk/token -isystem /usr/include/vtk/vtkkissfft -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/pyinterface/SerializerDE/CMakeFiles/SerializerDE.dir/SerializerDE.cpp.o -MF core/pyinterface/SerializerDE/CMakeFiles/SerializerDE.dir/SerializerDE.cpp.o.d -o core/pyinterface/SerializerDE/CMakeFiles/SerializerDE.dir/SerializerDE.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:31,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/string:52,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:1:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:33:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:21:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/PluginManager.h:37:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp: In member function ‘bool CompuCell3D::SerializerDE::serializeCellField(CompuCell3D::SerializeData&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:214:17: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  214 |                 for(pt.y =0 ; pt.y<fieldDim.y ; ++pt.y)
      |                 ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:228:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  228 |                         fieldData->GetPointData()->AddArray(typeArray);
      |                         ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp: In member function ‘bool CompuCell3D::SerializerDE::loadCellField(CompuCell3D::SerializeData&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:267:14: warning: unused variable ‘binaryFlag’ [-Wunused-variable]
  267 |         bool binaryFlag=(_sd.fileFormat=="binary");
      |              ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp: In member function ‘bool CompuCell3D::SerializerDE::loadScalarField(CompuCell3D::SerializeData&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:559:14: warning: unused variable ‘binaryFlag’ [-Wunused-variable]
  559 |         bool binaryFlag=(_sd.fileFormat=="binary");
      |              ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp: In member function ‘bool CompuCell3D::SerializerDE::loadScalarFieldCellLevel(CompuCell3D::SerializeData&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:676:14: warning: unused variable ‘binaryFlag’ [-Wunused-variable]
  676 |         bool binaryFlag=(_sd.fileFormat=="binary");
      |              ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp: In member function ‘bool CompuCell3D::SerializerDE::serializeSharedVectorFieldNumpy(CompuCell3D::SerializeData&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:749:11: warning: unused variable ‘x’ [-Wunused-variable]
  749 |     float x,y,z;
      |           ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:749:13: warning: unused variable ‘y’ [-Wunused-variable]
  749 |     float x,y,z;
      |             ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:749:15: warning: unused variable ‘z’ [-Wunused-variable]
  749 |     float x,y,z;
      |               ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp: In member function ‘bool CompuCell3D::SerializerDE::loadSharedVectorFieldNumpy(CompuCell3D::SerializeData&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:807:10: warning: unused variable ‘binaryFlag’ [-Wunused-variable]
  807 |     bool binaryFlag=(_sd.fileFormat=="binary");
      |          ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp: In member function ‘bool CompuCell3D::SerializerDE::loadVectorField(CompuCell3D::SerializeData&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:920:14: warning: unused variable ‘binaryFlag’ [-Wunused-variable]
  920 |         bool binaryFlag=(_sd.fileFormat=="binary");
      |              ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp: In member function ‘bool CompuCell3D::SerializerDE::loadVectorFieldCellLevel(CompuCell3D::SerializeData&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:1043:14: warning: unused variable ‘binaryFlag’ [-Wunused-variable]
 1043 |         bool binaryFlag=(_sd.fileFormat=="binary");
      |              ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp: In instantiation of ‘bool CompuCell3D::SerializerDE::loadConcentrationFieldTyped(CompuCell3D::SerializeData&, CompuCell3D::Field3D<T>*) [with T = char]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:97:63:   required from here
   97 |                 return this->loadConcentrationFieldTyped<char>(_sd, static_cast<Field3D<char>*>(ptr));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:434:10: warning: unused variable ‘binaryFlag’ [-Wunused-variable]
  434 |     bool binaryFlag=(_sd.fileFormat=="binary");
      |          ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp: In instantiation of ‘bool CompuCell3D::SerializerDE::loadConcentrationFieldTyped(CompuCell3D::SerializeData&, CompuCell3D::Field3D<T>*) [with T = unsigned char]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:100:72:   required from here
  100 |                 return this->loadConcentrationFieldTyped<unsigned char>(_sd, static_cast<Field3D<unsigned char>*>(ptr));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:434:10: warning: unused variable ‘binaryFlag’ [-Wunused-variable]
  434 |     bool binaryFlag=(_sd.fileFormat=="binary");
      |          ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp: In instantiation of ‘bool CompuCell3D::SerializerDE::loadConcentrationFieldTyped(CompuCell3D::SerializeData&, CompuCell3D::Field3D<T>*) [with T = short int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:103:64:   required from here
  103 |                 return this->loadConcentrationFieldTyped<short>(_sd, static_cast<Field3D<short>*>(ptr));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:434:10: warning: unused variable ‘binaryFlag’ [-Wunused-variable]
  434 |     bool binaryFlag=(_sd.fileFormat=="binary");
      |          ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp: In instantiation of ‘bool CompuCell3D::SerializerDE::loadConcentrationFieldTyped(CompuCell3D::SerializeData&, CompuCell3D::Field3D<T>*) [with T = short unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:106:73:   required from here
  106 |                 return this->loadConcentrationFieldTyped<unsigned short>(_sd, static_cast<Field3D<unsigned short>*>(ptr));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:434:10: warning: unused variable ‘binaryFlag’ [-Wunused-variable]
  434 |     bool binaryFlag=(_sd.fileFormat=="binary");
      |          ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp: In instantiation of ‘bool CompuCell3D::SerializerDE::loadConcentrationFieldTyped(CompuCell3D::SerializeData&, CompuCell3D::Field3D<T>*) [with T = int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:109:62:   required from here
  109 |                 return this->loadConcentrationFieldTyped<int>(_sd, static_cast<Field3D<int>*>(ptr));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:434:10: warning: unused variable ‘binaryFlag’ [-Wunused-variable]
  434 |     bool binaryFlag=(_sd.fileFormat=="binary");
      |          ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp: In instantiation of ‘bool CompuCell3D::SerializerDE::loadConcentrationFieldTyped(CompuCell3D::SerializeData&, CompuCell3D::Field3D<T>*) [with T = unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:112:71:   required from here
  112 |                 return this->loadConcentrationFieldTyped<unsigned int>(_sd, static_cast<Field3D<unsigned int>*>(ptr));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:434:10: warning: unused variable ‘binaryFlag’ [-Wunused-variable]
  434 |     bool binaryFlag=(_sd.fileFormat=="binary");
      |          ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp: In instantiation of ‘bool CompuCell3D::SerializerDE::loadConcentrationFieldTyped(CompuCell3D::SerializeData&, CompuCell3D::Field3D<T>*) [with T = long int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:115:63:   required from here
  115 |                 return this->loadConcentrationFieldTyped<long>(_sd, static_cast<Field3D<long>*>(ptr));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:434:10: warning: unused variable ‘binaryFlag’ [-Wunused-variable]
  434 |     bool binaryFlag=(_sd.fileFormat=="binary");
      |          ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp: In instantiation of ‘bool CompuCell3D::SerializerDE::loadConcentrationFieldTyped(CompuCell3D::SerializeData&, CompuCell3D::Field3D<T>*) [with T = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:118:72:   required from here
  118 |                 return this->loadConcentrationFieldTyped<unsigned long>(_sd, static_cast<Field3D<unsigned long>*>(ptr));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:434:10: warning: unused variable ‘binaryFlag’ [-Wunused-variable]
  434 |     bool binaryFlag=(_sd.fileFormat=="binary");
      |          ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp: In instantiation of ‘bool CompuCell3D::SerializerDE::loadConcentrationFieldTyped(CompuCell3D::SerializeData&, CompuCell3D::Field3D<T>*) [with T = float]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:121:64:   required from here
  121 |                 return this->loadConcentrationFieldTyped<float>(_sd, static_cast<Field3D<float>*>(ptr));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:434:10: warning: unused variable ‘binaryFlag’ [-Wunused-variable]
  434 |     bool binaryFlag=(_sd.fileFormat=="binary");
      |          ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp: In instantiation of ‘bool CompuCell3D::SerializerDE::loadConcentrationFieldTyped(CompuCell3D::SerializeData&, CompuCell3D::Field3D<T>*) [with T = double]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:124:65:   required from here
  124 |                 return this->loadConcentrationFieldTyped<double>(_sd, static_cast<Field3D<double>*>(ptr));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:434:10: warning: unused variable ‘binaryFlag’ [-Wunused-variable]
  434 |     bool binaryFlag=(_sd.fileFormat=="binary");
      |          ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp: In instantiation of ‘bool CompuCell3D::SerializerDE::loadConcentrationFieldTyped(CompuCell3D::SerializeData&, CompuCell3D::Field3D<T>*) [with T = long long int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:127:68:   required from here
  127 |                 return this->loadConcentrationFieldTyped<long long>(_sd, static_cast<Field3D<long long>*>(ptr));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:434:10: warning: unused variable ‘binaryFlag’ [-Wunused-variable]
  434 |     bool binaryFlag=(_sd.fileFormat=="binary");
      |          ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp: In instantiation of ‘bool CompuCell3D::SerializerDE::loadConcentrationFieldTyped(CompuCell3D::SerializeData&, CompuCell3D::Field3D<T>*) [with T = long long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:130:77:   required from here
  130 |                 return this->loadConcentrationFieldTyped<unsigned long long>(_sd, static_cast<Field3D<unsigned long long>*>(ptr));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDE.cpp:434:10: warning: unused variable ‘binaryFlag’ [-Wunused-variable]
  434 |     bool binaryFlag=(_sd.fileFormat=="binary");
      |          ^~~~~~~~~~
[218/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/ImplicitMotility/CMakeFiles/ImplicitMotilityShared.dir/link.d -Wl,-soname,libCC3DImplicitMotility.so.4.9 -o core/CompuCell3D/plugins/ImplicitMotility/libCC3DImplicitMotility.so.4.9.0 core/CompuCell3D/plugins/ImplicitMotility/CMakeFiles/ImplicitMotilityShared.dir/ImplicitMotilityPlugin.cpp.o core/CompuCell3D/plugins/ImplicitMotility/CMakeFiles/ImplicitMotilityShared.dir/ImplicitMotilityPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[219/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/VectorFieldPolarization/CMakeFiles/VectorFieldPolarizationShared.dir/link.d -Wl,-soname,libCC3DVectorFieldPolarization.so.4.9 -o core/CompuCell3D/plugins/VectorFieldPolarization/libCC3DVectorFieldPolarization.so.4.9.0 core/CompuCell3D/plugins/VectorFieldPolarization/CMakeFiles/VectorFieldPolarizationShared.dir/VectorFieldPolarizationPlugin.cpp.o core/CompuCell3D/plugins/VectorFieldPolarization/CMakeFiles/VectorFieldPolarizationShared.dir/VectorFieldPolarizationPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[220/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/CurvatureCalculator/CMakeFiles/CurvatureCalculatorShared.dir/link.d -Wl,-soname,libCC3DCurvatureCalculator.so.4.9 -o core/CompuCell3D/plugins/CurvatureCalculator/libCC3DCurvatureCalculator.so.4.9.0 core/CompuCell3D/plugins/CurvatureCalculator/CMakeFiles/CurvatureCalculatorShared.dir/CurvatureCalculatorPlugin.cpp.o core/CompuCell3D/plugins/CurvatureCalculator/CMakeFiles/CurvatureCalculatorShared.dir/CurvatureCalculatorPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../NeighborTracker:\$ORIGIN/../BoundaryPixelTracker:\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/plugins/NeighborTracker/libCC3DNeighborTracker.so.4.9.0  core/CompuCell3D/plugins/BoundaryPixelTracker/libCC3DBoundaryPixelTracker.so.4.9.0  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  -ldl  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[221/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/OrientedGrowth/CMakeFiles/OrientedGrowthShared.dir/link.d -Wl,-soname,libCC3DOrientedGrowth.so.4.9 -o core/CompuCell3D/plugins/OrientedGrowth/libCC3DOrientedGrowth.so.4.9.0 core/CompuCell3D/plugins/OrientedGrowth/CMakeFiles/OrientedGrowthShared.dir/OrientedGrowthPlugin.cpp.o core/CompuCell3D/plugins/OrientedGrowth/CMakeFiles/OrientedGrowthShared.dir/OrientedGrowthPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[222/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/BoundaryMonitor/CMakeFiles/BoundaryMonitorShared.dir/link.d -Wl,-soname,libCC3DBoundaryMonitor.so.4.9 -o core/CompuCell3D/plugins/BoundaryMonitor/libCC3DBoundaryMonitor.so.4.9.0 core/CompuCell3D/plugins/BoundaryMonitor/CMakeFiles/BoundaryMonitorShared.dir/BoundaryMonitorPlugin.cpp.o core/CompuCell3D/plugins/BoundaryMonitor/CMakeFiles/BoundaryMonitorShared.dir/BoundaryMonitorPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[223/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/Polarization23/CMakeFiles/Polarization23Shared.dir/link.d -Wl,-soname,libCC3DPolarization23.so.4.9 -o core/CompuCell3D/plugins/Polarization23/libCC3DPolarization23.so.4.9.0 core/CompuCell3D/plugins/Polarization23/CMakeFiles/Polarization23Shared.dir/Polarization23Plugin.cpp.o core/CompuCell3D/plugins/Polarization23/CMakeFiles/Polarization23Shared.dir/Polarization23PluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[224/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/OrientedGrowth2/CMakeFiles/OrientedGrowth2Shared.dir/link.d -Wl,-soname,libCC3DOrientedGrowth2.so.4.9 -o core/CompuCell3D/plugins/OrientedGrowth2/libCC3DOrientedGrowth2.so.4.9.0 core/CompuCell3D/plugins/OrientedGrowth2/CMakeFiles/OrientedGrowth2Shared.dir/OrientedGrowth2Plugin.cpp.o core/CompuCell3D/plugins/OrientedGrowth2/CMakeFiles/OrientedGrowth2Shared.dir/OrientedGrowth2PluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[225/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/ContactOrientation/CMakeFiles/ContactOrientationShared.dir/link.d -Wl,-soname,libCC3DContactOrientation.so.4.9 -o core/CompuCell3D/plugins/ContactOrientation/libCC3DContactOrientation.so.4.9.0 core/CompuCell3D/plugins/ContactOrientation/CMakeFiles/ContactOrientationShared.dir/ContactOrientationPlugin.cpp.o core/CompuCell3D/plugins/ContactOrientation/CMakeFiles/ContactOrientationShared.dir/ContactOrientationPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[226/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/VolumeTracker/CMakeFiles/VolumeTrackerShared.dir/link.d -Wl,-soname,libCC3DVolumeTracker.so.4.9 -o core/CompuCell3D/plugins/VolumeTracker/libCC3DVolumeTracker.so.4.9.0 core/CompuCell3D/plugins/VolumeTracker/CMakeFiles/VolumeTrackerShared.dir/VolumeTrackerPlugin.cpp.o core/CompuCell3D/plugins/VolumeTracker/CMakeFiles/VolumeTrackerShared.dir/VolumeTrackerPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[227/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/ClusterSurface/CMakeFiles/ClusterSurfaceShared.dir/link.d -Wl,-soname,libCC3DClusterSurface.so.4.9 -o core/CompuCell3D/plugins/ClusterSurface/libCC3DClusterSurface.so.4.9.0 core/CompuCell3D/plugins/ClusterSurface/CMakeFiles/ClusterSurfaceShared.dir/ClusterSurfacePlugin.cpp.o core/CompuCell3D/plugins/ClusterSurface/CMakeFiles/ClusterSurfaceShared.dir/ClusterSurfacePluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../ClusterSurfaceTracker:\$ORIGIN/../PixelTracker:\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/plugins/ClusterSurfaceTracker/libCC3DClusterSurfaceTracker.so.4.9.0  core/CompuCell3D/plugins/PixelTracker/libCC3DPixelTracker.so.4.9.0  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  -ldl  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
In member function ‘getTargetAndLambdaVolume’:
lto1: note: parameter passing for argument of type ‘struct pair’ when C++17 is enabled changed to match C++14 in GCC 10.1
In member function ‘getNewOldClusterSurfaceDiffs’:
lto1: note: parameter passing for argument of type ‘struct pair’ when C++17 is enabled changed to match C++14 in GCC 10.1
[228/395] /usr/bin/g++ -DSurfaceTrackerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/SurfaceTracker/CMakeFiles/SurfaceTrackerShared.dir/SurfaceTrackerPluginProxy.cpp.o -MF core/CompuCell3D/plugins/SurfaceTracker/CMakeFiles/SurfaceTrackerShared.dir/SurfaceTrackerPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/SurfaceTracker/CMakeFiles/SurfaceTrackerShared.dir/SurfaceTrackerPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/SurfaceTracker/SurfaceTrackerPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/SurfaceTracker/SurfaceTrackerPlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/SurfaceTracker/SurfaceTrackerPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[229/395] /usr/bin/g++ -DSurfaceTrackerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/SurfaceTracker/CMakeFiles/SurfaceTrackerShared.dir/SurfaceTrackerPlugin.cpp.o -MF core/CompuCell3D/plugins/SurfaceTracker/CMakeFiles/SurfaceTrackerShared.dir/SurfaceTrackerPlugin.cpp.o.d -o core/CompuCell3D/plugins/SurfaceTracker/CMakeFiles/SurfaceTrackerShared.dir/SurfaceTrackerPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/SurfaceTracker/SurfaceTrackerPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/SurfaceTracker/SurfaceTrackerPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/SurfaceTracker/SurfaceTrackerPlugin.cpp:9:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/SurfaceTracker/SurfaceTrackerPlugin.h: In constructor ‘CompuCell3D::SurfaceTrackerPlugin::SurfaceTrackerPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/SurfaceTracker/SurfaceTrackerPlugin.h:26:27: warning: ‘CompuCell3D::SurfaceTrackerPlugin::boundaryStrategy’ will be initialized after [-Wreorder]
   26 |         BoundaryStrategy *boundaryStrategy;
      |                           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/SurfaceTracker/SurfaceTrackerPlugin.h:25:22: warning:   ‘unsigned int CompuCell3D::SurfaceTrackerPlugin::maxNeighborIndex’ [-Wreorder]
   25 |         unsigned int maxNeighborIndex;
      |                      ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/SurfaceTracker/SurfaceTrackerPlugin.cpp:11:1: warning:   when initialized here [-Wreorder]
   11 | SurfaceTrackerPlugin::SurfaceTrackerPlugin() : cellFieldG(0), boundaryStrategy(0), maxNeighborIndex(0) {}
      | ^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/SurfaceTracker/SurfaceTrackerPlugin.cpp: In member function ‘virtual void CompuCell3D::SurfaceTrackerPlugin::field3DChange(const CompuCell3D::Point3D&, CompuCell3D::CellG*, CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/SurfaceTracker/SurfaceTrackerPlugin.cpp:40:18: warning: unused variable ‘token’ [-Wunused-variable]
   40 |     unsigned int token = 0;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/SurfaceTracker/SurfaceTrackerPlugin.cpp:41:12: warning: unused variable ‘distance’ [-Wunused-variable]
   41 |     double distance;
      |            ^~~~~~~~
[230/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/Mitosis/CMakeFiles/MitosisShared.dir/link.d -Wl,-soname,libCC3DMitosis.so.4.9 -o core/CompuCell3D/plugins/Mitosis/libCC3DMitosis.so.4.9.0 core/CompuCell3D/plugins/Mitosis/CMakeFiles/MitosisShared.dir/MitosisPlugin.cpp.o core/CompuCell3D/plugins/Mitosis/CMakeFiles/MitosisShared.dir/MitosisPluginProxy.cpp.o core/CompuCell3D/plugins/Mitosis/CMakeFiles/MitosisShared.dir/MitosisSimplePlugin.cpp.o  -Wl,-rpath,"\$ORIGIN/../PixelTracker:\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/plugins/PixelTracker/libCC3DPixelTracker.so.4.9.0  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  -ldl  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[231/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/CenterOfMass/CMakeFiles/CenterOfMassShared.dir/link.d -Wl,-soname,libCC3DCenterOfMass.so.4.9 -o core/CompuCell3D/plugins/CenterOfMass/libCC3DCenterOfMass.so.4.9.0 core/CompuCell3D/plugins/CenterOfMass/CMakeFiles/CenterOfMassShared.dir/CenterOfMassPlugin.cpp.o core/CompuCell3D/plugins/CenterOfMass/CMakeFiles/CenterOfMassShared.dir/CenterOfMassPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[232/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/AdhesionFlex/CMakeFiles/AdhesionFlexShared.dir/link.d -Wl,-soname,libCC3DAdhesionFlex.so.4.9 -o core/CompuCell3D/plugins/AdhesionFlex/libCC3DAdhesionFlex.so.4.9.0 core/CompuCell3D/plugins/AdhesionFlex/CMakeFiles/AdhesionFlexShared.dir/AdhesionFlexPlugin.cpp.o core/CompuCell3D/plugins/AdhesionFlex/CMakeFiles/AdhesionFlexShared.dir/AdhesionFlexPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
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[243/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/Plasticity/CMakeFiles/PlasticityShared.dir/link.d -Wl,-soname,libCC3DPlasticity.so.4.9 -o core/CompuCell3D/plugins/Plasticity/libCC3DPlasticity.so.4.9.0 core/CompuCell3D/plugins/Plasticity/CMakeFiles/PlasticityShared.dir/PlasticityPlugin.cpp.o core/CompuCell3D/plugins/Plasticity/CMakeFiles/PlasticityShared.dir/PlasticityPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../PlasticityTracker:\$ORIGIN/../NeighborTracker:\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/plugins/PlasticityTracker/libCC3DPlasticityTracker.so.4.9.0  core/CompuCell3D/plugins/NeighborTracker/libCC3DNeighborTracker.so.4.9.0  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  -ldl  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[244/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/steppables/BiasVectorSteppable/CMakeFiles/BiasVectorSteppableShared.dir/link.d -Wl,-soname,libCC3DBiasVectorSteppable.so.4.9 -o core/CompuCell3D/steppables/BiasVectorSteppable/libCC3DBiasVectorSteppable.so.4.9.0 core/CompuCell3D/steppables/BiasVectorSteppable/CMakeFiles/BiasVectorSteppableShared.dir/BiasVectorSteppable.cpp.o core/CompuCell3D/steppables/BiasVectorSteppable/CMakeFiles/BiasVectorSteppableShared.dir/BiasVectorSteppableProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../Automaton:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[245/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/steppables/Mitosis/CMakeFiles/MitosisSteppableShared.dir/link.d -Wl,-soname,libCC3DMitosisSteppable.so.4.9 -o core/CompuCell3D/steppables/Mitosis/libCC3DMitosisSteppable.so.4.9.0 core/CompuCell3D/steppables/Mitosis/CMakeFiles/MitosisSteppableShared.dir/MitosisSteppable.cpp.o core/CompuCell3D/steppables/Mitosis/CMakeFiles/MitosisSteppableShared.dir/MitosisSteppableProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../plugins/PixelTracker:\$ORIGIN/../../:\$ORIGIN/../../Potts3D:\$ORIGIN/../../Automaton:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/plugins/PixelTracker/libCC3DPixelTracker.so.4.9.0  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  -ldl  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[246/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/Secretion/CMakeFiles/SecretionShared.dir/link.d -Wl,-soname,libCC3DSecretion.so.4.9 -o core/CompuCell3D/plugins/Secretion/libCC3DSecretion.so.4.9.0 core/CompuCell3D/plugins/Secretion/CMakeFiles/SecretionShared.dir/FieldSecretor.cpp.o core/CompuCell3D/plugins/Secretion/CMakeFiles/SecretionShared.dir/SecretionDataP.cpp.o core/CompuCell3D/plugins/Secretion/CMakeFiles/SecretionShared.dir/SecretionPlugin.cpp.o core/CompuCell3D/plugins/Secretion/CMakeFiles/SecretionShared.dir/SecretionPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../BoundaryPixelTracker:\$ORIGIN/../PixelTracker:\$ORIGIN/../../steppables/BoxWatcher:\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/plugins/BoundaryPixelTracker/libCC3DBoundaryPixelTracker.so.4.9.0  core/CompuCell3D/plugins/PixelTracker/libCC3DPixelTracker.so.4.9.0  core/CompuCell3D/steppables/BoxWatcher/libCC3DBoxWatcher.so.4.9.0  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  -ldl  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  -lgomp && :
[247/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/steppables/FieldManager/CMakeFiles/FieldManagerShared.dir/link.d -Wl,-soname,libCC3DFieldManager.so.4.9 -o core/CompuCell3D/steppables/FieldManager/libCC3DFieldManager.so.4.9.0 core/CompuCell3D/steppables/FieldManager/CMakeFiles/FieldManagerShared.dir/FieldManager.cpp.o core/CompuCell3D/steppables/FieldManager/CMakeFiles/FieldManagerShared.dir/FieldManagerProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../Automaton:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[248/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/VectorFieldPolarization/libCC3DVectorFieldPolarization.so.4.9.0  core/CompuCell3D/plugins/VectorFieldPolarization/libCC3DVectorFieldPolarization.so.4.9 core/CompuCell3D/plugins/VectorFieldPolarization/libCC3DVectorFieldPolarization.so && :
[249/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/ImplicitMotility/libCC3DImplicitMotility.so.4.9.0  core/CompuCell3D/plugins/ImplicitMotility/libCC3DImplicitMotility.so.4.9 core/CompuCell3D/plugins/ImplicitMotility/libCC3DImplicitMotility.so && :
[250/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/CurvatureCalculator/libCC3DCurvatureCalculator.so.4.9.0  core/CompuCell3D/plugins/CurvatureCalculator/libCC3DCurvatureCalculator.so.4.9 core/CompuCell3D/plugins/CurvatureCalculator/libCC3DCurvatureCalculator.so && :
[251/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/OrientedGrowth/libCC3DOrientedGrowth.so.4.9.0  core/CompuCell3D/plugins/OrientedGrowth/libCC3DOrientedGrowth.so.4.9 core/CompuCell3D/plugins/OrientedGrowth/libCC3DOrientedGrowth.so && :
[252/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/OrientedGrowth2/libCC3DOrientedGrowth2.so.4.9.0  core/CompuCell3D/plugins/OrientedGrowth2/libCC3DOrientedGrowth2.so.4.9 core/CompuCell3D/plugins/OrientedGrowth2/libCC3DOrientedGrowth2.so && :
[253/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/ContactOrientation/libCC3DContactOrientation.so.4.9.0  core/CompuCell3D/plugins/ContactOrientation/libCC3DContactOrientation.so.4.9 core/CompuCell3D/plugins/ContactOrientation/libCC3DContactOrientation.so && :
[254/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/BoundaryMonitor/libCC3DBoundaryMonitor.so.4.9.0  core/CompuCell3D/plugins/BoundaryMonitor/libCC3DBoundaryMonitor.so.4.9 core/CompuCell3D/plugins/BoundaryMonitor/libCC3DBoundaryMonitor.so && :
[255/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/Polarization23/libCC3DPolarization23.so.4.9.0  core/CompuCell3D/plugins/Polarization23/libCC3DPolarization23.so.4.9 core/CompuCell3D/plugins/Polarization23/libCC3DPolarization23.so && :
[256/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/ClusterSurface/libCC3DClusterSurface.so.4.9.0  core/CompuCell3D/plugins/ClusterSurface/libCC3DClusterSurface.so.4.9 core/CompuCell3D/plugins/ClusterSurface/libCC3DClusterSurface.so && :
[257/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/VolumeTracker/libCC3DVolumeTracker.so.4.9.0  core/CompuCell3D/plugins/VolumeTracker/libCC3DVolumeTracker.so.4.9 core/CompuCell3D/plugins/VolumeTracker/libCC3DVolumeTracker.so && :
[258/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/SurfaceTracker/CMakeFiles/SurfaceTrackerShared.dir/link.d -Wl,-soname,libCC3DSurfaceTracker.so.4.9 -o core/CompuCell3D/plugins/SurfaceTracker/libCC3DSurfaceTracker.so.4.9.0 core/CompuCell3D/plugins/SurfaceTracker/CMakeFiles/SurfaceTrackerShared.dir/SurfaceTrackerPlugin.cpp.o core/CompuCell3D/plugins/SurfaceTracker/CMakeFiles/SurfaceTrackerShared.dir/SurfaceTrackerPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[259/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/AdhesionFlex/libCC3DAdhesionFlex.so.4.9.0  core/CompuCell3D/plugins/AdhesionFlex/libCC3DAdhesionFlex.so.4.9 core/CompuCell3D/plugins/AdhesionFlex/libCC3DAdhesionFlex.so && :
[260/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/Mitosis/libCC3DMitosis.so.4.9.0  core/CompuCell3D/plugins/Mitosis/libCC3DMitosis.so.4.9 core/CompuCell3D/plugins/Mitosis/libCC3DMitosis.so && :
[261/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/Chemotaxis/libCC3DChemotaxis.so.4.9.0  core/CompuCell3D/plugins/Chemotaxis/libCC3DChemotaxis.so.4.9 core/CompuCell3D/plugins/Chemotaxis/libCC3DChemotaxis.so && :
[262/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/CenterOfMass/libCC3DCenterOfMass.so.4.9.0  core/CompuCell3D/plugins/CenterOfMass/libCC3DCenterOfMass.so.4.9 core/CompuCell3D/plugins/CenterOfMass/libCC3DCenterOfMass.so && :
[263/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/MomentOfInertia/libCC3DMomentOfInertia.so.4.9.0  core/CompuCell3D/plugins/MomentOfInertia/libCC3DMomentOfInertia.so.4.9 core/CompuCell3D/plugins/MomentOfInertia/libCC3DMomentOfInertia.so && :
[264/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/ContactLocalFlex/libCC3DContactLocalFlex.so.4.9.0  core/CompuCell3D/plugins/ContactLocalFlex/libCC3DContactLocalFlex.so.4.9 core/CompuCell3D/plugins/ContactLocalFlex/libCC3DContactLocalFlex.so && :
[265/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/ContactLocalProduct/libCC3DContactLocalProduct.so.4.9.0  core/CompuCell3D/plugins/ContactLocalProduct/libCC3DContactLocalProduct.so.4.9 core/CompuCell3D/plugins/ContactLocalProduct/libCC3DContactLocalProduct.so && :
[266/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/ContactMultiCad/libCC3DContactMultiCad.so.4.9.0  core/CompuCell3D/plugins/ContactMultiCad/libCC3DContactMultiCad.so.4.9 core/CompuCell3D/plugins/ContactMultiCad/libCC3DContactMultiCad.so && :
[267/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/ConnectivityLocalFlex/libCC3DConnectivityLocalFlex.so.4.9.0  core/CompuCell3D/plugins/ConnectivityLocalFlex/libCC3DConnectivityLocalFlex.so.4.9 core/CompuCell3D/plugins/ConnectivityLocalFlex/libCC3DConnectivityLocalFlex.so && :
[268/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/ConnectivityGlobal/libCC3DConnectivityGlobal.so.4.9.0  core/CompuCell3D/plugins/ConnectivityGlobal/libCC3DConnectivityGlobal.so.4.9 core/CompuCell3D/plugins/ConnectivityGlobal/libCC3DConnectivityGlobal.so && :
[269/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/LengthConstraint/libCC3DLengthConstraint.so.4.9.0  core/CompuCell3D/plugins/LengthConstraint/libCC3DLengthConstraint.so.4.9 core/CompuCell3D/plugins/LengthConstraint/libCC3DLengthConstraint.so && :
[270/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/CellOrientation/libCC3DCellOrientation.so.4.9.0  core/CompuCell3D/plugins/CellOrientation/libCC3DCellOrientation.so.4.9 core/CompuCell3D/plugins/CellOrientation/libCC3DCellOrientation.so && :
[271/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/Elasticity/libCC3DElasticity.so.4.9.0  core/CompuCell3D/plugins/Elasticity/libCC3DElasticity.so.4.9 core/CompuCell3D/plugins/Elasticity/libCC3DElasticity.so && :
[272/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/Plasticity/libCC3DPlasticity.so.4.9.0  core/CompuCell3D/plugins/Plasticity/libCC3DPlasticity.so.4.9 core/CompuCell3D/plugins/Plasticity/libCC3DPlasticity.so && :
[273/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/link.d -Wl,-soname,libPyPlugin.so.4.9 -o core/pyinterface/PyPlugin/libPyPlugin.so.4.9.0 core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/PyPlugin.cpp.o core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/PyCompuCellObjAdapter.cpp.o core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/EnergyFunctionPyWrapper.cpp.o core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/ChangeWatcherPyWrapper.cpp.o core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/StepperPyWrapper.cpp.o core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/TypeChangeWatcherPyWrapper.cpp.o core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/NeighborFinderParams.cpp.o core/pyinterface/PyPlugin/CMakeFiles/PyPlugin.dir/PyAttributeAdder.cpp.o  -Wl,-rpath,"\$ORIGIN/../../CompuCell3D:\$ORIGIN/../../CompuCell3D/Automaton:\$ORIGIN/../../CompuCell3D/Potts3D:\$ORIGIN/../../muParser/ExpressionEvaluator:\$ORIGIN/../../muParser:\$ORIGIN/../../XMLUtils:\$ORIGIN/../../PublicUtilities:\$ORIGIN/../../CompuCell3D/Boundary:\$ORIGIN/../../CompuCell3D/Field3D:\$ORIGIN/../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  /usr/lib64/libpython3.14.so  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[274/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/Secretion/libCC3DSecretion.so.4.9.0  core/CompuCell3D/plugins/Secretion/libCC3DSecretion.so.4.9 core/CompuCell3D/plugins/Secretion/libCC3DSecretion.so && :
[275/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/steppables/FieldManager/libCC3DFieldManager.so.4.9.0  core/CompuCell3D/steppables/FieldManager/libCC3DFieldManager.so.4.9 core/CompuCell3D/steppables/FieldManager/libCC3DFieldManager.so && :
[276/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/steppables/BiasVectorSteppable/libCC3DBiasVectorSteppable.so.4.9.0  core/CompuCell3D/steppables/BiasVectorSteppable/libCC3DBiasVectorSteppable.so.4.9 core/CompuCell3D/steppables/BiasVectorSteppable/libCC3DBiasVectorSteppable.so && :
[277/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/steppables/Mitosis/libCC3DMitosisSteppable.so.4.9.0  core/CompuCell3D/steppables/Mitosis/libCC3DMitosisSteppable.so.4.9 core/CompuCell3D/steppables/Mitosis/libCC3DMitosisSteppable.so && :
[278/395] /usr/bin/cmake -E cmake_symlink_library core/pyinterface/PyPlugin/libPyPlugin.so.4.9.0  core/pyinterface/PyPlugin/libPyPlugin.so.4.9 core/pyinterface/PyPlugin/libPyPlugin.so && :
[279/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/pyinterface/SerializerDE/CMakeFiles/SerializerDE.dir/link.d -Wl,-soname,libSerializerDE.so.4.9 -o core/pyinterface/SerializerDE/libSerializerDE.so.4.9.0 core/pyinterface/SerializerDE/CMakeFiles/SerializerDE.dir/SerializerDE.cpp.o  -Wl,-rpath,"\$ORIGIN/../PlayerPythonNew:\$ORIGIN/../../CompuCell3D/plugins/NeighborTracker:\$ORIGIN/../../CompuCell3D/plugins/FocalPointPlasticity:\$ORIGIN/../../CompuCell3D:\$ORIGIN/../../CompuCell3D/Automaton:\$ORIGIN/../../CompuCell3D/Potts3D:\$ORIGIN/../../muParser/ExpressionEvaluator:\$ORIGIN/../../XMLUtils:\$ORIGIN/../../PublicUtilities:\$ORIGIN/../../CompuCell3D/Boundary:\$ORIGIN/../../CompuCell3D/Field3D:\$ORIGIN/../../Logger:\$ORIGIN/../../muParser:"  core/pyinterface/PlayerPythonNew/libFieldExtractor.so.4.9.0  /usr/lib64/libpython3.14.so  core/CompuCell3D/plugins/NeighborTracker/libCC3DNeighborTracker.so.4.9.0  core/CompuCell3D/plugins/FocalPointPlasticity/libCC3DFocalPointPlasticity.so.4.9.0  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a  core/muParser/libCC3DmuParser.so.4.9.0  /usr/lib64/libvtkRenderingVolume.so.1  /usr/lib64/libvtkInteractionStyle.so.1  /usr/lib64/libvtkRenderingCore.so.1  /usr/lib64/libvtkIOLegacy.so.1  /usr/lib64/libvtkIOCellGrid.so.1  /usr/lib64/libvtkIOCore.so.1  /usr/lib64/libvtkFiltersCellGrid.so.1  /usr/lib64/libvtkFiltersCore.so.1  /usr/lib64/libvtkCommonExecutionModel.so.1  /usr/lib64/libvtkCommonDataModel.so.1  /usr/lib64/libvtkCommonTransforms.so.1  /usr/lib64/libvtkCommonMisc.so.1  /usr/lib64/libvtkCommonMath.so.1  /usr/lib64/libvtkCommonCore.so.1  /usr/lib64/libfmt.so.11.2.0  /usr/lib64/libvtkscn.so.1  /usr/lib64/libvtktoken.so.1  /usr/lib64/libvtksys.so.1  -ldl  /usr/lib64/libvtkkissfft.so.1 && :
[280/395] /usr/bin/cmake -E cmake_symlink_library core/pyinterface/SerializerDE/libSerializerDE.so.4.9.0  core/pyinterface/SerializerDE/libSerializerDE.so.4.9 core/pyinterface/SerializerDE/libSerializerDE.so && :
[281/395] /usr/bin/g++ -DCellTypeMonitorShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/CellTypeMonitor/CMakeFiles/CellTypeMonitorShared.dir/CellTypeMonitorPluginProxy.cpp.o -MF core/CompuCell3D/plugins/CellTypeMonitor/CMakeFiles/CellTypeMonitorShared.dir/CellTypeMonitorPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/CellTypeMonitor/CMakeFiles/CellTypeMonitorShared.dir/CellTypeMonitorPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellTypeMonitor/CellTypeMonitorPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellTypeMonitor/CellTypeMonitorPlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellTypeMonitor/CellTypeMonitorPluginProxy.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[282/395] /usr/bin/g++ -DCellTypeMonitorShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/CellTypeMonitor/CMakeFiles/CellTypeMonitorShared.dir/CellTypeMonitorPlugin.cpp.o -MF core/CompuCell3D/plugins/CellTypeMonitor/CMakeFiles/CellTypeMonitorShared.dir/CellTypeMonitorPlugin.cpp.o.d -o core/CompuCell3D/plugins/CellTypeMonitor/CMakeFiles/CellTypeMonitorShared.dir/CellTypeMonitorPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellTypeMonitor/CellTypeMonitorPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellTypeMonitor/CellTypeMonitorPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellTypeMonitor/CellTypeMonitorPlugin.cpp:5:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellTypeMonitor/CellTypeMonitorPlugin.h: In constructor ‘CompuCell3D::CellTypeMonitorPlugin::CellTypeMonitorPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellTypeMonitor/CellTypeMonitorPlugin.h:40:44: warning: ‘CompuCell3D::CellTypeMonitorPlugin::lockPtr’ will be initialized after [-Wreorder]
   40 |         ParallelUtilsOpenMP::OpenMPLock_t *lockPtr;
      |                                            ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellTypeMonitor/CellTypeMonitorPlugin.h:32:25: warning:   ‘CC3DXMLElement* CompuCell3D::CellTypeMonitorPlugin::xmlData’ [-Wreorder]
   32 |         CC3DXMLElement *xmlData;
      |                         ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellTypeMonitor/CellTypeMonitorPlugin.cpp:8:1: warning:   when initialized here [-Wreorder]
    8 | CellTypeMonitorPlugin::CellTypeMonitorPlugin() :
      | ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellTypeMonitor/CellTypeMonitorPlugin.h:45:36: warning: ‘CompuCell3D::CellTypeMonitorPlugin::cellFieldG’ will be initialized after [-Wreorder]
   45 |         WatchableField3D<CellG *> *cellFieldG;
      |                                    ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellTypeMonitor/CellTypeMonitorPlugin.h:44:27: warning:   ‘CompuCell3D::BoundaryStrategy* CompuCell3D::CellTypeMonitorPlugin::boundaryStrategy’ [-Wreorder]
   44 |         BoundaryStrategy *boundaryStrategy;
      |                           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellTypeMonitor/CellTypeMonitorPlugin.cpp:8:1: warning:   when initialized here [-Wreorder]
    8 | CellTypeMonitorPlugin::CellTypeMonitorPlugin() :
      | ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<unsigned char>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:952:11:   required from ‘class CompuCell3D::Array3DCUDA<unsigned char>’
  952 |     class Array3DCUDA : public Field3DImpl<T> {
      |           ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellTypeMonitor/CellTypeMonitorPlugin.cpp:23:16:   required from here
   23 |         delete cellTypeArray;
      |                ^~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = unsigned char]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = unsigned char]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DCUDA<unsigned char>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellTypeMonitor/CellTypeMonitorPlugin.cpp:23:16:   required from here
   23 |         delete cellTypeArray;
      |                ^~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:125:23: warning: ‘CompuCell3D::Dim3D CompuCell3D::Field3DImpl<T>::getDim() const [with T = unsigned char]’ was hidden [-Woverloaded-virtual=]
  125 |         virtual Dim3D getDim() const { return dim; }
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:1029:15: note:   by ‘CompuCell3D::Dim3D CompuCell3D::Array3DCUDA<T>::getDim() [with T = unsigned char]’
 1029 |         Dim3D getDim() { return Field3DImpl<T>::dim; }
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DCUDA<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellTypeMonitor/CellTypeMonitorPlugin.cpp:25:16:   required from here
   25 |         delete cellIdArray;
      |                ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:125:23: warning: ‘CompuCell3D::Dim3D CompuCell3D::Field3DImpl<T>::getDim() const [with T = float]’ was hidden [-Woverloaded-virtual=]
  125 |         virtual Dim3D getDim() const { return dim; }
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:1029:15: note:   by ‘CompuCell3D::Dim3D CompuCell3D::Array3DCUDA<T>::getDim() [with T = float]’
 1029 |         Dim3D getDim() { return Field3DImpl<T>::dim; }
      |               ^~~~~~
[283/395] /usr/bin/g++ -DVolumeShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/Volume/CMakeFiles/VolumeShared.dir/VolumePluginProxy.cpp.o -MF core/CompuCell3D/plugins/Volume/CMakeFiles/VolumeShared.dir/VolumePluginProxy.cpp.o.d -o core/CompuCell3D/plugins/Volume/CMakeFiles/VolumeShared.dir/VolumePluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Volume/VolumePluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Volume/VolumePlugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Volume/VolumePluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Volume/VolumePlugin.h: In constructor ‘CompuCell3D::VolumePlugin::VolumePlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Volume/VolumePlugin.h:32:14: warning: ‘CompuCell3D::VolumePlugin::energyExpressionDefined’ will be initialized after [-Wreorder]
   32 |         bool energyExpressionDefined;
      |              ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Volume/VolumePlugin.h:30:30: warning:   ‘CompuCell3D::ParallelUtilsOpenMP* CompuCell3D::VolumePlugin::pUtils’ [-Wreorder]
   30 |         ParallelUtilsOpenMP *pUtils;
      |                              ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Volume/VolumePlugin.h:60:9: warning:   when initialized here [-Wreorder]
   60 |         VolumePlugin() : potts(0), energyExpressionDefined(false), pUtils(0), pluginName("Volume") {};
      |         ^~~~~~~~~~~~
[284/395] /usr/bin/g++ -DVolumeShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/Volume/CMakeFiles/VolumeShared.dir/VolumePlugin.cpp.o -MF core/CompuCell3D/plugins/Volume/CMakeFiles/VolumeShared.dir/VolumePlugin.cpp.o.d -o core/CompuCell3D/plugins/Volume/CMakeFiles/VolumeShared.dir/VolumePlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Volume/VolumePlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Volume/VolumePlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Volume/VolumePlugin.cpp:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Volume/VolumePlugin.h: In constructor ‘CompuCell3D::VolumePlugin::VolumePlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Volume/VolumePlugin.h:32:14: warning: ‘CompuCell3D::VolumePlugin::energyExpressionDefined’ will be initialized after [-Wreorder]
   32 |         bool energyExpressionDefined;
      |              ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Volume/VolumePlugin.h:30:30: warning:   ‘CompuCell3D::ParallelUtilsOpenMP* CompuCell3D::VolumePlugin::pUtils’ [-Wreorder]
   30 |         ParallelUtilsOpenMP *pUtils;
      |                              ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Volume/VolumePlugin.h:60:9: warning:   when initialized here [-Wreorder]
   60 |         VolumePlugin() : potts(0), energyExpressionDefined(false), pUtils(0), pluginName("Volume") {};
      |         ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Volume/VolumePlugin.cpp: In member function ‘virtual void CompuCell3D::VolumePlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Volume/VolumePlugin.cpp:80:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   80 |             for (int i = 0; i < energyVec.size(); ++i) {
      |                             ~~^~~~~~~~~~~~~~~~~~
[285/395] /usr/bin/g++ -DContactShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/Contact/CMakeFiles/ContactShared.dir/ContactPluginProxy.cpp.o -MF core/CompuCell3D/plugins/Contact/CMakeFiles/ContactShared.dir/ContactPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/Contact/CMakeFiles/ContactShared.dir/ContactPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Contact/ContactPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Contact/ContactPlugin.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Contact/ContactPluginProxy.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[286/395] /usr/bin/g++ -DContactShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/Contact/CMakeFiles/ContactShared.dir/ContactPlugin.cpp.o -MF core/CompuCell3D/plugins/Contact/CMakeFiles/ContactShared.dir/ContactPlugin.cpp.o.d -o core/CompuCell3D/plugins/Contact/CMakeFiles/ContactShared.dir/ContactPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Contact/ContactPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Contact/ContactPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Contact/ContactPlugin.cpp:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Contact/ContactPlugin.h: In constructor ‘CompuCell3D::ContactPlugin::ContactPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Contact/ContactPlugin.h:33:25: warning: ‘CompuCell3D::ContactPlugin::xmlData’ will be initialized after [-Wreorder]
   33 |         CC3DXMLElement *xmlData;
      |                         ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Contact/ContactPlugin.h:30:14: warning:   ‘bool CompuCell3D::ContactPlugin::weightDistance’ [-Wreorder]
   30 |         bool weightDistance;
      |              ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Contact/ContactPlugin.cpp:10:1: warning:   when initialized here [-Wreorder]
   10 | ContactPlugin::ContactPlugin() : xmlData(0), weightDistance(false) {
      | ^~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Contact/ContactPlugin.cpp: In member function ‘virtual void CompuCell3D::ContactPlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Contact/ContactPlugin.cpp:40:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   40 |     for (int i = 0; i < energyVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Contact/ContactPlugin.cpp: In member function ‘virtual double CompuCell3D::ContactPlugin::changeEnergy(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Contact/ContactPlugin.cpp:85:18: warning: unused variable ‘token’ [-Wunused-variable]
   85 |     unsigned int token = 0;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Contact/ContactPlugin.cpp:86:12: warning: unused variable ‘distance’ [-Wunused-variable]
   86 |     double distance = 0;
      |            ^~~~~~~~
[287/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/SurfaceTracker/libCC3DSurfaceTracker.so.4.9.0  core/CompuCell3D/plugins/SurfaceTracker/libCC3DSurfaceTracker.so.4.9 core/CompuCell3D/plugins/SurfaceTracker/libCC3DSurfaceTracker.so && :
[288/395] /usr/bin/g++ -DSurfaceShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/Surface/CMakeFiles/SurfaceShared.dir/SurfacePlugin.cpp.o -MF core/CompuCell3D/plugins/Surface/CMakeFiles/SurfaceShared.dir/SurfacePlugin.cpp.o.d -o core/CompuCell3D/plugins/Surface/CMakeFiles/SurfaceShared.dir/SurfacePlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePlugin.cpp:9:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePlugin.h: In constructor ‘CompuCell3D::SurfacePlugin::SurfacePlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePlugin.h:35:14: warning: ‘CompuCell3D::SurfacePlugin::energyExpressionDefined’ will be initialized after [-Wreorder]
   35 |         bool energyExpressionDefined;
      |              ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePlugin.h:33:30: warning:   ‘CompuCell3D::ParallelUtilsOpenMP* CompuCell3D::SurfacePlugin::pUtils’ [-Wreorder]
   33 |         ParallelUtilsOpenMP *pUtils;
      |                              ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePlugin.h:75:9: warning:   when initialized here [-Wreorder]
   75 |         SurfacePlugin() : potts(0), energyExpressionDefined(false), pUtils(0), pluginName("Surface"), scaleSurface(1.0),
      |         ^~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePlugin.h:54:16: warning: ‘CompuCell3D::SurfacePlugin::scaleSurface’ will be initialized after [-Wreorder]
   54 |         double scaleSurface;
      |                ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePlugin.h:40:27: warning:   ‘CompuCell3D::BoundaryStrategy* CompuCell3D::SurfacePlugin::boundaryStrategy’ [-Wreorder]
   40 |         BoundaryStrategy *boundaryStrategy;
      |                           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePlugin.h:75:9: warning:   when initialized here [-Wreorder]
   75 |         SurfacePlugin() : potts(0), energyExpressionDefined(false), pUtils(0), pluginName("Surface"), scaleSurface(1.0),
      |         ^~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePlugin.cpp: In member function ‘virtual void CompuCell3D::SurfacePlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePlugin.cpp:94:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   94 |             for (int i = 0; i < energyVec.size(); ++i) {
      |                             ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePlugin.cpp: In member function ‘std::pair<double, double> CompuCell3D::SurfacePlugin::getNewOldSurfaceDiffs(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePlugin.cpp:143:99: note: parameter passing for argument of type ‘std::pair<double, double>’ when C++17 is enabled changed to match C++14 in GCC 10.1
  143 | SurfacePlugin::getNewOldSurfaceDiffs(const Point3D &pt, const CellG *newCell, const CellG *oldCell) {
      |                                                                                                   ^
[289/395] /usr/bin/g++ -DChemotaxisSimpleShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/ChemotaxisSimple/CMakeFiles/ChemotaxisSimpleShared.dir/ChemotaxisSimpleEnergy.cpp.o -MF core/CompuCell3D/plugins/ChemotaxisSimple/CMakeFiles/ChemotaxisSimpleShared.dir/ChemotaxisSimpleEnergy.cpp.o.d -o core/CompuCell3D/plugins/ChemotaxisSimple/CMakeFiles/ChemotaxisSimpleShared.dir/ChemotaxisSimpleEnergy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ChemotaxisSimple/ChemotaxisSimpleEnergy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ChemotaxisSimple/ChemotaxisSimpleEnergy.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[290/395] /usr/bin/g++ -DSurfaceShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/Surface/CMakeFiles/SurfaceShared.dir/SurfacePluginProxy.cpp.o -MF core/CompuCell3D/plugins/Surface/CMakeFiles/SurfaceShared.dir/SurfacePluginProxy.cpp.o.d -o core/CompuCell3D/plugins/Surface/CMakeFiles/SurfaceShared.dir/SurfacePluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePlugin.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePluginProxy.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePlugin.h: In constructor ‘CompuCell3D::SurfacePlugin::SurfacePlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePlugin.h:35:14: warning: ‘CompuCell3D::SurfacePlugin::energyExpressionDefined’ will be initialized after [-Wreorder]
   35 |         bool energyExpressionDefined;
      |              ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePlugin.h:33:30: warning:   ‘CompuCell3D::ParallelUtilsOpenMP* CompuCell3D::SurfacePlugin::pUtils’ [-Wreorder]
   33 |         ParallelUtilsOpenMP *pUtils;
      |                              ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePlugin.h:75:9: warning:   when initialized here [-Wreorder]
   75 |         SurfacePlugin() : potts(0), energyExpressionDefined(false), pUtils(0), pluginName("Surface"), scaleSurface(1.0),
      |         ^~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePlugin.h:54:16: warning: ‘CompuCell3D::SurfacePlugin::scaleSurface’ will be initialized after [-Wreorder]
   54 |         double scaleSurface;
      |                ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePlugin.h:40:27: warning:   ‘CompuCell3D::BoundaryStrategy* CompuCell3D::SurfacePlugin::boundaryStrategy’ [-Wreorder]
   40 |         BoundaryStrategy *boundaryStrategy;
      |                           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Surface/SurfacePlugin.h:75:9: warning:   when initialized here [-Wreorder]
   75 |         SurfacePlugin() : potts(0), energyExpressionDefined(false), pUtils(0), pluginName("Surface"), scaleSurface(1.0),
      |         ^~~~~~~~~~~~~
[291/395] /usr/bin/g++ -DConvergentExtensionShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/ConvergentExtension/CMakeFiles/ConvergentExtensionShared.dir/ConvergentExtensionPluginProxy.cpp.o -MF core/CompuCell3D/plugins/ConvergentExtension/CMakeFiles/ConvergentExtensionShared.dir/ConvergentExtensionPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/ConvergentExtension/CMakeFiles/ConvergentExtensionShared.dir/ConvergentExtensionPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConvergentExtension/ConvergentExtensionPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConvergentExtension/ConvergentExtensionPlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConvergentExtension/ConvergentExtensionPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[292/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/link.d -Wl,-soname,libCC3DPDESolvers.so.4.9 -o core/CompuCell3D/steppables/PDESolvers/libCC3DPDESolvers.so.4.9.0 core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/AdvectionDiffusionSolverFE.cpp.o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/FastDiffusionSolver2DFE.cpp.o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/DiffusionSolverFE.cpp.o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/DiffusionSolverFE_CPU.cpp.o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/DiffusionSolverFE_CPU_Implicit.cpp.o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/SteadyStateDiffusionSolver2D.cpp.o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/SteadyStateDiffusionSolver.cpp.o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/PDESolversProxy.cpp.o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/DiffSecrData.cpp.o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/FlexibleDiffusionSolverFE.cpp.o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/FlexibleDiffusionSolverADE.cpp.o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/KernelDiffusionSolver.cpp.o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/ReactionDiffusionSolverFE_SavHog.cpp.o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/ReactionDiffusionSolverFE.cpp.o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/ReactionDiffusionSolverFVM.cpp.o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/FlexibleReactionDiffusionSolverFE.cpp.o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/FluctuationCompensator.cpp.o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/HW3CRT.c.o core/CompuCell3D/steppables/PDESolvers/CMakeFiles/PDESolversShared.dir/HWSCRT.c.o  -Wl,-rpath,"\$ORIGIN/../../plugins/PixelTracker:\$ORIGIN/../../plugins/NeighborTracker:\$ORIGIN/../BoxWatcher:\$ORIGIN/../../plugins/CellType:\$ORIGIN/../../:\$ORIGIN/../../Potts3D:\$ORIGIN/../../Automaton:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/plugins/PixelTracker/libCC3DPixelTracker.so.4.9.0  core/CompuCell3D/plugins/NeighborTracker/libCC3DNeighborTracker.so.4.9.0  core/CompuCell3D/steppables/BoxWatcher/libCC3DBoxWatcher.so.4.9.0  core/CompuCell3D/plugins/CellType/libCC3DCellType.so.4.9.0  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  -ldl  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a  -lgcc_s_asneeded  -lgcc_s_asneeded && :
[293/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/steppables/PDESolvers/libCC3DPDESolvers.so.4.9.0  core/CompuCell3D/steppables/PDESolvers/libCC3DPDESolvers.so.4.9 core/CompuCell3D/steppables/PDESolvers/libCC3DPDESolvers.so && :
[294/395] /usr/bin/g++ -DPDESolverCallerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/PDESolverCaller/CMakeFiles/PDESolverCallerShared.dir/PDESolverCallerPlugin.cpp.o -MF core/CompuCell3D/plugins/PDESolverCaller/CMakeFiles/PDESolverCallerShared.dir/PDESolverCallerPlugin.cpp.o.d -o core/CompuCell3D/plugins/PDESolverCaller/CMakeFiles/PDESolverCallerShared.dir/PDESolverCallerPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PDESolverCaller/PDESolverCallerPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PDESolverCaller/PDESolverCallerPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PDESolverCaller/PDESolverCallerPlugin.cpp:6:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PDESolverCaller/PDESolverCallerPlugin.h: In constructor ‘CompuCell3D::PDESolverCallerPlugin::PDESolverCallerPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PDESolverCaller/PDESolverCallerPlugin.h:36:20: warning: ‘CompuCell3D::PDESolverCallerPlugin::sim’ will be initialized after [-Wreorder]
   36 |         Simulator *sim;
      |                    ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PDESolverCaller/PDESolverCallerPlugin.h:35:18: warning:   ‘CompuCell3D::Potts3D* CompuCell3D::PDESolverCallerPlugin::potts’ [-Wreorder]
   35 |         Potts3D *potts;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PDESolverCaller/PDESolverCallerPlugin.cpp:8:1: warning:   when initialized here [-Wreorder]
    8 | PDESolverCallerPlugin::PDESolverCallerPlugin() : sim(0), potts(0), xmlData(0) {}
      | ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PDESolverCaller/PDESolverCallerPlugin.cpp: In member function ‘virtual void CompuCell3D::PDESolverCallerPlugin::step()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PDESolverCaller/PDESolverCallerPlugin.cpp:41:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::SolverData>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   41 |     for (int i = 0; i < solverDataVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PDESolverCaller/PDESolverCallerPlugin.cpp:46:70: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
   46 |         if (!((currentAttempt - reminder) % ratio) && currentAttempt > reminder) {
      |                                                       ~~~~~~~~~~~~~~~^~~~~~~~~~
[295/395] /usr/bin/g++ -DConvergentExtensionShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/ConvergentExtension/CMakeFiles/ConvergentExtensionShared.dir/ConvergentExtensionPlugin.cpp.o -MF core/CompuCell3D/plugins/ConvergentExtension/CMakeFiles/ConvergentExtensionShared.dir/ConvergentExtensionPlugin.cpp.o.d -o core/CompuCell3D/plugins/ConvergentExtension/CMakeFiles/ConvergentExtensionShared.dir/ConvergentExtensionPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConvergentExtension/ConvergentExtensionPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConvergentExtension/ConvergentExtensionPlugin.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConvergentExtension/ConvergentExtensionPlugin.cpp: In member function ‘virtual void CompuCell3D::ConvergentExtensionPlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConvergentExtension/ConvergentExtensionPlugin.cpp:50:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   50 |         for (int i = 0 ; i<alphaVec.size(); ++i){
      |                          ~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConvergentExtension/ConvergentExtensionPlugin.cpp: In member function ‘virtual double CompuCell3D::ConvergentExtensionPlugin::changeEnergy(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConvergentExtension/ConvergentExtensionPlugin.cpp:266:48: warning: unused variable ‘radicalNewOldCell’ [-Wunused-variable]
  266 |                                         double radicalNewOldCell=0.5*sqrt((newIxxOldCell-newIyyOldCell)*(newIxxOldCell-newIyyOldCell)+4.0*newIxyOldCell*newIxyOldCell);
      |                                                ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConvergentExtension/ConvergentExtensionPlugin.cpp:91:22: warning: unused variable ‘token’ [-Wunused-variable]
   91 |         unsigned int token = 0;
      |                      ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConvergentExtension/ConvergentExtensionPlugin.cpp:92:16: warning: unused variable ‘distance’ [-Wunused-variable]
   92 |         double distance = 0;
      |                ^~~~~~~~
[296/395] /usr/bin/g++ -DPDESolverCallerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/PDESolverCaller/CMakeFiles/PDESolverCallerShared.dir/PDESolverCallerPluginProxy.cpp.o -MF core/CompuCell3D/plugins/PDESolverCaller/CMakeFiles/PDESolverCallerShared.dir/PDESolverCallerPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/PDESolverCaller/CMakeFiles/PDESolverCallerShared.dir/PDESolverCallerPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PDESolverCaller/PDESolverCallerPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PDESolverCaller/PDESolverCallerPlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PDESolverCaller/PDESolverCallerPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[297/395] /usr/bin/g++ -DCurvatureShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/Curvature/CMakeFiles/CurvatureShared.dir/CurvaturePluginProxy.cpp.o -MF core/CompuCell3D/plugins/Curvature/CMakeFiles/CurvatureShared.dir/CurvaturePluginProxy.cpp.o.d -o core/CompuCell3D/plugins/Curvature/CMakeFiles/CurvatureShared.dir/CurvaturePluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePluginProxy.cpp:4:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[298/395] /usr/bin/g++ -DExternalPotentialShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/ExternalPotential/CMakeFiles/ExternalPotentialShared.dir/ExternalPotentialPluginProxy.cpp.o -MF core/CompuCell3D/plugins/ExternalPotential/CMakeFiles/ExternalPotentialShared.dir/ExternalPotentialPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/ExternalPotential/CMakeFiles/ExternalPotentialShared.dir/ExternalPotentialPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ExternalPotential/ExternalPotentialPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ExternalPotential/ExternalPotentialPlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ExternalPotential/ExternalPotentialPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[299/395] /usr/bin/g++ -DExternalPotentialShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/ExternalPotential/CMakeFiles/ExternalPotentialShared.dir/ExternalPotentialPlugin.cpp.o -MF core/CompuCell3D/plugins/ExternalPotential/CMakeFiles/ExternalPotentialShared.dir/ExternalPotentialPlugin.cpp.o.d -o core/CompuCell3D/plugins/ExternalPotential/CMakeFiles/ExternalPotentialShared.dir/ExternalPotentialPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ExternalPotential/ExternalPotentialPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ExternalPotential/ExternalPotentialPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ExternalPotential/ExternalPotentialPlugin.cpp:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ExternalPotential/ExternalPotentialPlugin.h: In constructor ‘CompuCell3D::ExternalPotentialPlugin::ExternalPotentialPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ExternalPotential/ExternalPotentialPlugin.h:50:30: warning: ‘CompuCell3D::ExternalPotentialPlugin::lambdaVec’ will be initialized after [-Wreorder]
   50 |         Coordinates3D<float> lambdaVec;
      |                              ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ExternalPotential/ExternalPotentialPlugin.h:45:25: warning:   ‘CC3DXMLElement* CompuCell3D::ExternalPotentialPlugin::xmlData’ [-Wreorder]
   45 |         CC3DXMLElement *xmlData;
      |                         ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ExternalPotential/ExternalPotentialPlugin.cpp:12:5: warning:   when initialized here [-Wreorder]
   12 |     ExternalPotentialPlugin::ExternalPotentialPlugin() : lambdaVec(Coordinates3D<float>(0., 0., 0.)), xmlData(0),
      |     ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ExternalPotential/ExternalPotentialPlugin.cpp: In member function ‘virtual void CompuCell3D::ExternalPotentialPlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ExternalPotential/ExternalPotentialPlugin.cpp:121:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  121 |                 for (int i = 0; i < energyVec.size(); ++i) {
      |                                 ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ExternalPotential/ExternalPotentialPlugin.cpp: In member function ‘double CompuCell3D::ExternalPotentialPlugin::changeEnergyGlobal(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ExternalPotential/ExternalPotentialPlugin.cpp:339:15: warning: unused variable ‘prefferedCoordinate’ [-Wunused-variable]
  339 |         short prefferedCoordinate = pt.z + 1;
      |               ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ExternalPotential/ExternalPotentialPlugin.cpp:349:13: warning: variable ‘counter’ set but not used [-Wunused-but-set-variable=]
  349 |         int counter = 0;
      |             ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ExternalPotential/ExternalPotentialPlugin.cpp: In member function ‘double CompuCell3D::ExternalPotentialPlugin::changeEnergyByCellType(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ExternalPotential/ExternalPotentialPlugin.cpp:461:15: warning: unused variable ‘prefferedCoordinate’ [-Wunused-variable]
  461 |         short prefferedCoordinate = pt.z + 1;
      |               ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ExternalPotential/ExternalPotentialPlugin.cpp:471:13: warning: variable ‘counter’ set but not used [-Wunused-but-set-variable=]
  471 |         int counter = 0;
      |             ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ExternalPotential/ExternalPotentialPlugin.cpp: In member function ‘double CompuCell3D::ExternalPotentialPlugin::changeEnergyByCellId(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ExternalPotential/ExternalPotentialPlugin.cpp:582:15: warning: unused variable ‘prefferedCoordinate’ [-Wunused-variable]
  582 |         short prefferedCoordinate = pt.z + 1;
      |               ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ExternalPotential/ExternalPotentialPlugin.cpp:593:13: warning: variable ‘counter’ set but not used [-Wunused-but-set-variable=]
  593 |         int counter = 0;
      |             ^~~~~~~
[300/395] /usr/bin/g++ -DCurvatureShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/Curvature/CMakeFiles/CurvatureShared.dir/CurvaturePlugin.cpp.o -MF core/CompuCell3D/plugins/Curvature/CMakeFiles/CurvatureShared.dir/CurvaturePlugin.cpp.o.d -o core/CompuCell3D/plugins/Curvature/CMakeFiles/CurvatureShared.dir/CurvaturePlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp: In member function ‘virtual void CompuCell3D::CurvaturePlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:102:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  102 |     for (int i = 0; i < internalCurvatureParamVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:137:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  137 |     for (int i = 0; i < internalTypeSpecificCurvatureParamVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:169:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<unsigned char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  169 |     for (int i = 0; i < internalCellTypesVector.size(); ++i)
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:170:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<unsigned char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  170 |         for (int j = 0; j < internalCellTypesVector.size(); ++j) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:189:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<unsigned char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  189 |     for (int i = 0; i < internalTypeSpecCellTypesVector.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:161:9: warning: variable ‘size’ set but not used [-Wunused-but-set-variable=]
  161 |     int size = 0;
      |         ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp: In member function ‘double CompuCell3D::CurvaturePlugin::tryAddingNewJunctionWithinCluster(const CompuCell3D::Point3D&, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:250:98: warning: comparison of integer expressions of different signedness: ‘std::set<CompuCell3D::CurvatureTrackerData>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  250 |     if (curvatureTrackerAccessor.get(newCell->extraAttribPtr)->internalCurvatureNeighbors.size() >=
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
  251 |         newCellInternalParam.maxNumberOfJunctions) {
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                 
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:268:38: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  268 |     for (unsigned int nIdx = 0; nIdx <= maxNeighborIndexLocal; ++nIdx) {
      |                                 ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:298:100: warning: comparison of integer expressions of different signedness: ‘std::set<CompuCell3D::CurvatureTrackerData>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  298 |         if (curvatureTrackerAccessor.get(nCell->extraAttribPtr)->internalCurvatureNeighbors.size() >=
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
  299 |             nCellInternalParam.maxNumberOfJunctions) {
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                 
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:304:102: warning: comparison of integer expressions of different signedness: ‘std::set<CompuCell3D::CurvatureTrackerData>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  304 |         if (curvatureTrackerAccessor.get(newCell->extraAttribPtr)->internalCurvatureNeighbors.size() >=
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
  305 |             newCellInternalParam.maxNumberOfJunctions) {
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~                                                 
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp: In member function ‘virtual double CompuCell3D::CurvaturePlugin::changeEnergy(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:726:16: warning: unused variable ‘leftLeftLeftCell’ [-Wunused-variable]
  726 |         CellG *leftLeftLeftCell = 0;
      |                ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:730:16: warning: unused variable ‘rightRightRightCell’ [-Wunused-variable]
  730 |         CellG *rightRightRightCell = 0;
      |                ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:356:35: warning: unused variable ‘fieldG’ [-Wunused-variable]
  356 |     WatchableField3D < CellG * > *fieldG = (WatchableField3D < CellG * > *)
      |                                   ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:361:12: warning: unused variable ‘nCell’ [-Wunused-variable]
  361 |     CellG *nCell;
      |            ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:362:12: warning: unused variable ‘nnCell’ [-Wunused-variable]
  362 |     CellG *nnCell;
      |            ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:434:11: warning: unused variable ‘deltaL’ [-Wunused-variable]
  434 |     float deltaL;
      |           ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:435:11: warning: unused variable ‘lAfter’ [-Wunused-variable]
  435 |     float lAfter;
      |           ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:438:11: warning: unused variable ‘nCellVol’ [-Wunused-variable]
  438 |     float nCellVol;
      |           ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:440:12: warning: variable ‘rightNeighborOfOldCell’ set but not used [-Wunused-but-set-variable=]
  440 |     CellG *rightNeighborOfOldCell = 0;
      |            ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:441:12: warning: variable ‘leftNeighborOfOldCell’ set but not used [-Wunused-but-set-variable=]
  441 |     CellG *leftNeighborOfOldCell = 0;
      |            ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:443:12: warning: variable ‘rightRightNeighborOfOldCell’ set but not used [-Wunused-but-set-variable=]
  443 |     CellG *rightRightNeighborOfOldCell = 0;
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:444:12: warning: variable ‘leftLeftNeighborOfOldCell’ set but not used [-Wunused-but-set-variable=]
  444 |     CellG *leftLeftNeighborOfOldCell = 0;
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp: In member function ‘virtual void CompuCell3D::CurvaturePlugin::field3DChange(const CompuCell3D::Point3D&, CompuCell3D::CellG*, CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Curvature/CurvaturePlugin.cpp:848:16: warning: unused variable ‘distance’ [-Wunused-variable]
  848 |         double distance = distInvariantCM(xCMNew, yCMNew, zCMNew, xCMNeighbor, yCMNeighbor, zCMNeighbor, fieldDim,
      |                ^~~~~~~~
[301/395] /usr/bin/g++ -DCompartmentShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/Compartment/CMakeFiles/CompartmentShared.dir/CompartmentPluginProxy.cpp.o -MF core/CompuCell3D/plugins/Compartment/CMakeFiles/CompartmentShared.dir/CompartmentPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/Compartment/CMakeFiles/CompartmentShared.dir/CompartmentPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Compartment/CompartmentPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Compartment/CompartmentPlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Compartment/CompartmentPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[302/395] /usr/bin/g++ -DCompartmentShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/Compartment/CMakeFiles/CompartmentShared.dir/CompartmentPlugin.cpp.o -MF core/CompuCell3D/plugins/Compartment/CMakeFiles/CompartmentShared.dir/CompartmentPlugin.cpp.o.d -o core/CompuCell3D/plugins/Compartment/CMakeFiles/CompartmentShared.dir/CompartmentPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Compartment/CompartmentPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Compartment/CompartmentPlugin.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Compartment/CompartmentPlugin.cpp: In member function ‘virtual double CompuCell3D::CompartmentPlugin::changeEnergy(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Compartment/CompartmentPlugin.cpp:40:16: warning: unused variable ‘token’ [-Wunused-variable]
   40 |   unsigned int token = 0;
      |                ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Compartment/CompartmentPlugin.cpp: In member function ‘virtual void CompuCell3D::CompartmentPlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Compartment/CompartmentPlugin.cpp:161:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  161 |     for (int i = 0; i < energyVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Compartment/CompartmentPlugin.cpp:175:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  175 |     for (int i = 0; i < energyInternalVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~
[303/395] /usr/bin/g++ -DContactInternalShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/ContactInternal/CMakeFiles/ContactInternalShared.dir/ContactInternalPluginProxy.cpp.o -MF core/CompuCell3D/plugins/ContactInternal/CMakeFiles/ContactInternalShared.dir/ContactInternalPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/ContactInternal/CMakeFiles/ContactInternalShared.dir/ContactInternalPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactInternal/ContactInternalPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactInternal/ContactInternalPlugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactInternal/ContactInternalPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[304/395] /usr/bin/g++ -DContactInternalShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/ContactInternal/CMakeFiles/ContactInternalShared.dir/ContactInternalPlugin.cpp.o -MF core/CompuCell3D/plugins/ContactInternal/CMakeFiles/ContactInternalShared.dir/ContactInternalPlugin.cpp.o.d -o core/CompuCell3D/plugins/ContactInternal/CMakeFiles/ContactInternalShared.dir/ContactInternalPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactInternal/ContactInternalPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactInternal/ContactInternalPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactInternal/ContactInternalPlugin.cpp: In member function ‘virtual double CompuCell3D::ContactInternalPlugin::changeEnergy(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactInternal/ContactInternalPlugin.cpp:34:16: warning: unused variable ‘token’ [-Wunused-variable]
   34 |   unsigned int token = 0;
      |                ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactInternal/ContactInternalPlugin.cpp:35:10: warning: unused variable ‘distance’ [-Wunused-variable]
   35 |   double distance = 0;
      |          ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactInternal/ContactInternalPlugin.cpp: In member function ‘virtual void CompuCell3D::ContactInternalPlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactInternal/ContactInternalPlugin.cpp:131:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  131 |     for (int i = 0; i < energyVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~
[305/395] /usr/bin/g++ -DConnectivityShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/Connectivity/CMakeFiles/ConnectivityShared.dir/ConnectivityPluginProxy.cpp.o -MF core/CompuCell3D/plugins/Connectivity/CMakeFiles/ConnectivityShared.dir/ConnectivityPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/Connectivity/CMakeFiles/ConnectivityShared.dir/ConnectivityPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Connectivity/ConnectivityPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Connectivity/ConnectivityPlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Connectivity/ConnectivityPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[306/395] /usr/bin/g++ -DConnectivityShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/Connectivity/CMakeFiles/ConnectivityShared.dir/ConnectivityPlugin.cpp.o -MF core/CompuCell3D/plugins/Connectivity/CMakeFiles/ConnectivityShared.dir/ConnectivityPlugin.cpp.o.d -o core/CompuCell3D/plugins/Connectivity/CMakeFiles/ConnectivityShared.dir/ConnectivityPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Connectivity/ConnectivityPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Connectivity/ConnectivityPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Connectivity/ConnectivityPlugin.cpp:5:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Connectivity/ConnectivityPlugin.h: In constructor ‘CompuCell3D::ConnectivityPlugin::ConnectivityPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Connectivity/ConnectivityPlugin.h:31:18: warning: ‘CompuCell3D::ConnectivityPlugin::potts’ will be initialized after [-Wreorder]
   31 |         Potts3D *potts;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Connectivity/ConnectivityPlugin.h:23:22: warning:   ‘unsigned int CompuCell3D::ConnectivityPlugin::numberOfNeighbors’ [-Wreorder]
   23 |         unsigned int numberOfNeighbors;
      |                      ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Connectivity/ConnectivityPlugin.cpp:8:1: warning:   when initialized here [-Wreorder]
    8 | ConnectivityPlugin::ConnectivityPlugin() : potts(0), numberOfNeighbors(8) {
      | ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Connectivity/ConnectivityPlugin.cpp: In member function ‘virtual double CompuCell3D::ConnectivityPlugin::changeEnergy(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Connectivity/ConnectivityPlugin.cpp:55:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   55 |     for (int i = 0; i <= firstMaxIndex; ++i) {
      |                     ~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Connectivity/ConnectivityPlugin.cpp:75:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
   75 |     for (int i = 0; i < numberOfNeighbors; ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Connectivity/ConnectivityPlugin.cpp: In member function ‘void CompuCell3D::ConnectivityPlugin::orderNeighborsClockwise(CompuCell3D::Point3D&, const std::vector<CompuCell3D::Point3D>&, std::vector<int>&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Connectivity/ConnectivityPlugin.cpp:122:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
  122 |         for (int i = 0; i < numberOfNeighbors; ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~
[307/395] /usr/bin/g++ -DOrientedContactShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/OrientedContact/CMakeFiles/OrientedContactShared.dir/OrientedContactPluginProxy.cpp.o -MF core/CompuCell3D/plugins/OrientedContact/CMakeFiles/OrientedContactShared.dir/OrientedContactPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/OrientedContact/CMakeFiles/OrientedContactShared.dir/OrientedContactPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[308/395] /usr/bin/g++ -DOrientedContactShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/OrientedContact/CMakeFiles/OrientedContactShared.dir/OrientedContactPlugin.cpp.o -MF core/CompuCell3D/plugins/OrientedContact/CMakeFiles/OrientedContactShared.dir/OrientedContactPlugin.cpp.o.d -o core/CompuCell3D/plugins/OrientedContact/CMakeFiles/OrientedContactShared.dir/OrientedContactPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp: In member function ‘double CompuCell3D::OrientedContactPlugin::getOrientation(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:71:14: warning: unused variable ‘newIzz’ [-Wunused-variable]
   71 |       double newIzz = yPtSumSQ + xPtSumSQ - (newYCM*yPtSum + newXCM*xPtSum);
      |              ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:73:14: warning: unused variable ‘newIyz’ [-Wunused-variable]
   73 |       double newIyz = -yzSum + newYCM*zPtSum + newZCM*yPtSum - (newCell->volume+1)*newYCM*newZCM;
      |              ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:74:14: warning: unused variable ‘newIxz’ [-Wunused-variable]
   74 |       double newIxz = -xzSum + newXCM*zPtSum + newZCM*xPtSum - (newCell->volume+1)*newXCM*newZCM;
      |              ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:139:16: warning: unused variable ‘newIzz’ [-Wunused-variable]
  139 |         double newIzz = yPtSumSQ + xPtSumSQ - (newYCM * yPtSum + newXCM * xPtSum);
      |                ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:141:16: warning: unused variable ‘newIyz’ [-Wunused-variable]
  141 |         double newIyz = -yzSum + newYCM * zPtSum + newZCM * yPtSum - (oldCell->volume - 1) * newYCM * newZCM;
      |                ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:142:16: warning: unused variable ‘newIxz’ [-Wunused-variable]
  142 |         double newIxz = -xzSum + newXCM * zPtSum + newZCM * xPtSum - (oldCell->volume - 1) * newXCM * newZCM;
      |                ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp: In member function ‘double CompuCell3D::OrientedContactPlugin::getMediumOrientation(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:259:16: warning: unused variable ‘newIzz’ [-Wunused-variable]
  259 |         double newIzz = yPtSumSQ + xPtSumSQ - (newYCM * yPtSum + newXCM * xPtSum);
      |                ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:261:16: warning: unused variable ‘newIyz’ [-Wunused-variable]
  261 |         double newIyz = -yzSum + newYCM * zPtSum + newZCM * yPtSum - (newCell->volume + 1) * newYCM * newZCM;
      |                ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:262:16: warning: unused variable ‘newIxz’ [-Wunused-variable]
  262 |         double newIxz = -xzSum + newXCM * zPtSum + newZCM * xPtSum - (newCell->volume + 1) * newXCM * newZCM;
      |                ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:346:16: warning: unused variable ‘newIzz’ [-Wunused-variable]
  346 |         double newIzz = yPtSumSQ + xPtSumSQ - (newYCM * yPtSum + newXCM * xPtSum);
      |                ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:348:16: warning: unused variable ‘newIyz’ [-Wunused-variable]
  348 |         double newIyz = -yzSum + newYCM * zPtSum + newZCM * yPtSum - (oldCell->volume - 1) * newYCM * newZCM;
      |                ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:349:16: warning: unused variable ‘newIxz’ [-Wunused-variable]
  349 |         double newIxz = -xzSum + newXCM * zPtSum + newZCM * xPtSum - (oldCell->volume - 1) * newXCM * newZCM;
      |                ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:205:82: warning: unused variable ‘deltaE’ [-Wunused-variable]
  205 |     double ecc1, ecc2, v1x, v1y, v2x, v2y, r1x, r1y, r2x, r2y, s01, s02, E1, E2, deltaE;
      |                                                                                  ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp: In member function ‘virtual double CompuCell3D::OrientedContactPlugin::changeEnergy(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:401:16: warning: unused variable ‘token’ [-Wunused-variable]
  401 |   unsigned int token = 0;
      |                ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:402:10: warning: unused variable ‘distance’ [-Wunused-variable]
  402 |   double distance = 0;
      |          ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp: In member function ‘virtual void CompuCell3D::OrientedContactPlugin::update(CC3DXMLElement*, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:484:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  484 |     for (int i = 0; i < energyVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp: In member function ‘double CompuCell3D::OrientedContactPlugin::getMediumOrientation(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:393:1: warning: control reaches end of non-void function [-Wreturn-type]
  393 | }
      | ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp: In member function ‘CompuCell3D::OrientedContactPlugin::getOrientation(CompuCell3D::Point3D const&, CompuCell3D::CellG const*, CompuCell3D::CellG const*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:173:80: warning: ‘v1x’ may be used uninitialized [-Wmaybe-uninitialized]
  173 |     s01 = (r1x * v1x + r1y * v1y) / (sqrt((r1x * r1x + r1y * r1y) * (v1x * v1x + v1y * v1y)) + eps);
      |                                                                     ~~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:21:24: note: ‘v1x’ was declared here
   21 |     double ecc1, ecc2, v1x, v1y, v2x, v2y, r1x, r1y, r2x, r2y, s01, s02, E1, E2, deltaE;
      |                        ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:173:86: warning: ‘v1y’ may be used uninitialized [-Wmaybe-uninitialized]
  173 |     s01 = (r1x * v1x + r1y * v1y) / (sqrt((r1x * r1x + r1y * r1y) * (v1x * v1x + v1y * v1y)) + eps);
      |                                                                                  ~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:21:29: note: ‘v1y’ was declared here
   21 |     double ecc1, ecc2, v1x, v1y, v2x, v2y, r1x, r1y, r2x, r2y, s01, s02, E1, E2, deltaE;
      |                             ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:173:54: warning: ‘r1x’ may be used uninitialized [-Wmaybe-uninitialized]
  173 |     s01 = (r1x * v1x + r1y * v1y) / (sqrt((r1x * r1x + r1y * r1y) * (v1x * v1x + v1y * v1y)) + eps);
      |                                           ~~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:21:44: note: ‘r1x’ was declared here
   21 |     double ecc1, ecc2, v1x, v1y, v2x, v2y, r1x, r1y, r2x, r2y, s01, s02, E1, E2, deltaE;
      |                                            ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:173:60: warning: ‘r1y’ may be used uninitialized [-Wmaybe-uninitialized]
  173 |     s01 = (r1x * v1x + r1y * v1y) / (sqrt((r1x * r1x + r1y * r1y) * (v1x * v1x + v1y * v1y)) + eps);
      |                                                        ~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:21:49: note: ‘r1y’ was declared here
   21 |     double ecc1, ecc2, v1x, v1y, v2x, v2y, r1x, r1y, r2x, r2y, s01, s02, E1, E2, deltaE;
      |                                                 ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:182:75: warning: ‘v1x_before’ may be used uninitialized [-Wmaybe-uninitialized]
  182 |                  (sqrt((r1x * r1x + r1y * r1y) * (v1x_before * v1x_before + v1y_before * v1y_before)) + eps);
      |                                                  ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:22:38: note: ‘v1x_before’ was declared here
   22 |     double ecc1_before, ecc2_before, v1x_before, v1y_before, v2x_before, v2y_before, s01_before, s02_before;
      |                                      ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:182:88: warning: ‘v1y_before’ may be used uninitialized [-Wmaybe-uninitialized]
  182 |                  (sqrt((r1x * r1x + r1y * r1y) * (v1x_before * v1x_before + v1y_before * v1y_before)) + eps);
      |                                                                             ~~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:22:50: note: ‘v1y_before’ was declared here
   22 |     double ecc1_before, ecc2_before, v1x_before, v1y_before, v2x_before, v2y_before, s01_before, s02_before;
      |                                                  ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:177:80: warning: ‘v2x’ may be used uninitialized [-Wmaybe-uninitialized]
  177 |     s02 = (r2x * v2x + r2y * v2y) / (sqrt((r2x * r2x + r2y * r2y) * (v2x * v2x + v2y * v2y)) + eps);
      |                                                                     ~~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:21:34: note: ‘v2x’ was declared here
   21 |     double ecc1, ecc2, v1x, v1y, v2x, v2y, r1x, r1y, r2x, r2y, s01, s02, E1, E2, deltaE;
      |                                  ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:177:86: warning: ‘v2y’ may be used uninitialized [-Wmaybe-uninitialized]
  177 |     s02 = (r2x * v2x + r2y * v2y) / (sqrt((r2x * r2x + r2y * r2y) * (v2x * v2x + v2y * v2y)) + eps);
      |                                                                                  ~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:21:39: note: ‘v2y’ was declared here
   21 |     double ecc1, ecc2, v1x, v1y, v2x, v2y, r1x, r1y, r2x, r2y, s01, s02, E1, E2, deltaE;
      |                                       ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:177:54: warning: ‘r2x’ may be used uninitialized [-Wmaybe-uninitialized]
  177 |     s02 = (r2x * v2x + r2y * v2y) / (sqrt((r2x * r2x + r2y * r2y) * (v2x * v2x + v2y * v2y)) + eps);
      |                                           ~~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:21:54: note: ‘r2x’ was declared here
   21 |     double ecc1, ecc2, v1x, v1y, v2x, v2y, r1x, r1y, r2x, r2y, s01, s02, E1, E2, deltaE;
      |                                                      ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:177:60: warning: ‘r2y’ may be used uninitialized [-Wmaybe-uninitialized]
  177 |     s02 = (r2x * v2x + r2y * v2y) / (sqrt((r2x * r2x + r2y * r2y) * (v2x * v2x + v2y * v2y)) + eps);
      |                                                        ~~~~^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:21:59: note: ‘r2y’ was declared here
   21 |     double ecc1, ecc2, v1x, v1y, v2x, v2y, r1x, r1y, r2x, r2y, s01, s02, E1, E2, deltaE;
      |                                                           ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:186:75: warning: ‘v2x_before’ may be used uninitialized [-Wmaybe-uninitialized]
  186 |                  (sqrt((r2x * r2x + r2y * r2y) * (v2x_before * v2x_before + v2y_before * v2y_before)) + eps);
      |                                                  ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:22:62: note: ‘v2x_before’ was declared here
   22 |     double ecc1_before, ecc2_before, v1x_before, v1y_before, v2x_before, v2y_before, s01_before, s02_before;
      |                                                              ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:186:88: warning: ‘v2y_before’ may be used uninitialized [-Wmaybe-uninitialized]
  186 |                  (sqrt((r2x * r2x + r2y * r2y) * (v2x_before * v2x_before + v2y_before * v2y_before)) + eps);
      |                                                                             ~~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.cpp:22:74: note: ‘v2y_before’ was declared here
   22 |     double ecc1_before, ecc2_before, v1x_before, v1y_before, v2x_before, v2y_before, s01_before, s02_before;
      |                                                                          ^~~~~~~~~~
[309/395] /usr/bin/g++ -DGlobalBoundaryPixelTrackerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/CMakeFiles/GlobalBoundaryPixelTrackerShared.dir/GlobalBoundaryPixelTrackerPluginProxy.cpp.o -MF core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/CMakeFiles/GlobalBoundaryPixelTrackerShared.dir/GlobalBoundaryPixelTrackerPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/CMakeFiles/GlobalBoundaryPixelTrackerShared.dir/GlobalBoundaryPixelTrackerPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/GlobalBoundaryPixelTrackerPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/GlobalBoundaryPixelTrackerPlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/GlobalBoundaryPixelTrackerPluginProxy.cpp:4:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[310/395] /usr/bin/g++ -DGlobalBoundaryPixelTrackerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -fopenmp -MD -MT core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/CMakeFiles/GlobalBoundaryPixelTrackerShared.dir/GlobalBoundaryPixelTrackerPlugin.cpp.o -MF core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/CMakeFiles/GlobalBoundaryPixelTrackerShared.dir/GlobalBoundaryPixelTrackerPlugin.cpp.o.d -o core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/CMakeFiles/GlobalBoundaryPixelTrackerShared.dir/GlobalBoundaryPixelTrackerPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/GlobalBoundaryPixelTrackerPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/GlobalBoundaryPixelTrackerPlugin.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/GlobalBoundaryPixelTrackerPlugin.cpp:9:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/GlobalBoundaryPixelTrackerPlugin.h: In constructor ‘CompuCell3D::GlobalBoundaryPixelTrackerPlugin::GlobalBoundaryPixelTrackerPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/GlobalBoundaryPixelTrackerPlugin.h:38:27: warning: ‘CompuCell3D::GlobalBoundaryPixelTrackerPlugin::boundaryStrategy’ will be initialized after [-Wreorder]
   38 |         BoundaryStrategy *boundaryStrategy;
      |                           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/GlobalBoundaryPixelTrackerPlugin.h:37:15: warning:   ‘float CompuCell3D::GlobalBoundaryPixelTrackerPlugin::container_refresh_fraction’ [-Wreorder]
   37 |         float container_refresh_fraction;
      |               ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/GlobalBoundaryPixelTrackerPlugin.cpp:11:1: warning:   when initialized here [-Wreorder]
   11 | GlobalBoundaryPixelTrackerPlugin::GlobalBoundaryPixelTrackerPlugin() :
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/GlobalBoundaryPixelTrackerPlugin.cpp: In member function ‘virtual void CompuCell3D::GlobalBoundaryPixelTrackerPlugin::handleEvent(CompuCell3D::CC3DEvent&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/GlobalBoundaryPixelTrackerPlugin.cpp:91:11: warning: variable ‘newDim’ set but not used [-Wunused-but-set-variable=]
   91 |     Dim3D newDim = ev.newDim;
      |           ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/GlobalBoundaryPixelTrackerPlugin.cpp:92:11: warning: variable ‘oldDim’ set but not used [-Wunused-but-set-variable=]
   92 |     Dim3D oldDim = ev.oldDim;
      |           ^~~~~~
[311/395] /usr/bin/g++ -DViscosityShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/Viscosity/CMakeFiles/ViscosityShared.dir/ViscosityPlugin.cpp.o -MF core/CompuCell3D/plugins/Viscosity/CMakeFiles/ViscosityShared.dir/ViscosityPlugin.cpp.o.d -o core/CompuCell3D/plugins/Viscosity/CMakeFiles/ViscosityShared.dir/ViscosityPlugin.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Viscosity/ViscosityPlugin.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Viscosity/ViscosityPlugin.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Viscosity/ViscosityPlugin.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Viscosity/ViscosityPlugin.h: In constructor ‘CompuCell3D::ViscosityPlugin::ViscosityPlugin()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Viscosity/ViscosityPlugin.h:30:16: warning: ‘CompuCell3D::ViscosityPlugin::lambdaViscosity’ will be initialized after [-Wreorder]
   30 |         double lambdaViscosity;
      |                ^~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Viscosity/ViscosityPlugin.h:29:22: warning:   ‘unsigned int CompuCell3D::ViscosityPlugin::maxNeighborIndex’ [-Wreorder]
   29 |         unsigned int maxNeighborIndex;
      |                      ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Viscosity/ViscosityPlugin.cpp:10:1: warning:   when initialized here [-Wreorder]
   10 | ViscosityPlugin::ViscosityPlugin() : potts(0), sim(0), neighborTrackerAccessorPtr(0), lambdaViscosity(0),
      | ^~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Viscosity/ViscosityPlugin.cpp: In member function ‘virtual void CompuCell3D::ViscosityPlugin::init(CompuCell3D::Simulator*, CC3DXMLElement*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Viscosity/ViscosityPlugin.cpp:27:13: warning: unused variable ‘pluginCOM’ [-Wunused-variable]
   27 |     Plugin *pluginCOM = Simulator::pluginManager.get("CenterOfMass",
      |             ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Viscosity/ViscosityPlugin.cpp: In member function ‘virtual double CompuCell3D::ViscosityPlugin::changeEnergy(const CompuCell3D::Point3D&, const CompuCell3D::CellG*, const CompuCell3D::CellG*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Viscosity/ViscosityPlugin.cpp:86:18: warning: unused variable ‘token’ [-Wunused-variable]
   86 |     unsigned int token = 0;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Viscosity/ViscosityPlugin.cpp:87:12: warning: unused variable ‘distance’ [-Wunused-variable]
   87 |     double distance = 0;
      |            ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Viscosity/ViscosityPlugin.cpp:91:24: warning: unused variable ‘x1’ [-Wunused-variable]
   91 |     double x0, y0, z0, x1, y1, z1;
      |                        ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Viscosity/ViscosityPlugin.cpp:91:28: warning: unused variable ‘y1’ [-Wunused-variable]
   91 |     double x0, y0, z0, x1, y1, z1;
      |                            ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Viscosity/ViscosityPlugin.cpp:91:32: warning: unused variable ‘z1’ [-Wunused-variable]
   91 |     double x0, y0, z0, x1, y1, z1;
      |                                ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Viscosity/ViscosityPlugin.cpp:115:10: warning: unused variable ‘printFlag’ [-Wunused-variable]
  115 |     bool printFlag = false;
      |          ^~~~~~~~~
[312/395] /usr/bin/g++ -DViscosityShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/plugins/Viscosity/CMakeFiles/ViscosityShared.dir/ViscosityPluginProxy.cpp.o -MF core/CompuCell3D/plugins/Viscosity/CMakeFiles/ViscosityShared.dir/ViscosityPluginProxy.cpp.o.d -o core/CompuCell3D/plugins/Viscosity/CMakeFiles/ViscosityShared.dir/ViscosityPluginProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Viscosity/ViscosityPluginProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Viscosity/ViscosityPlugin.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Viscosity/ViscosityPluginProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[313/395] /usr/bin/g++ -DPIFInitializerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/PIFInitializer/CMakeFiles/PIFInitializerShared.dir/PIFInitializerProxy.cpp.o -MF core/CompuCell3D/steppables/PIFInitializer/CMakeFiles/PIFInitializerShared.dir/PIFInitializerProxy.cpp.o.d -o core/CompuCell3D/steppables/PIFInitializer/CMakeFiles/PIFInitializerShared.dir/PIFInitializerProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PIFInitializer/PIFInitializerProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PIFInitializer/PIFInitializer.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PIFInitializer/PIFInitializerProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[314/395] /usr/bin/g++ -DPIFInitializerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/PIFInitializer/CMakeFiles/PIFInitializerShared.dir/PIFInitializer.cpp.o -MF core/CompuCell3D/steppables/PIFInitializer/CMakeFiles/PIFInitializerShared.dir/PIFInitializer.cpp.o.d -o core/CompuCell3D/steppables/PIFInitializer/CMakeFiles/PIFInitializerShared.dir/PIFInitializer.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PIFInitializer/PIFInitializer.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PIFInitializer/PIFInitializer.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[315/395] /usr/bin/g++ -DPIFDumperShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/PIFDumper/CMakeFiles/PIFDumperShared.dir/PIFDumperProxy.cpp.o -MF core/CompuCell3D/steppables/PIFDumper/CMakeFiles/PIFDumperShared.dir/PIFDumperProxy.cpp.o.d -o core/CompuCell3D/steppables/PIFDumper/CMakeFiles/PIFDumperShared.dir/PIFDumperProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PIFDumper/PIFDumperProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PIFDumper/PIFDumper.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PIFDumper/PIFDumperProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[316/395] /usr/bin/g++ -DPIFDumperShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/PIFDumper/CMakeFiles/PIFDumperShared.dir/PIFDumper.cpp.o -MF core/CompuCell3D/steppables/PIFDumper/CMakeFiles/PIFDumperShared.dir/PIFDumper.cpp.o.d -o core/CompuCell3D/steppables/PIFDumper/CMakeFiles/PIFDumperShared.dir/PIFDumper.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PIFDumper/PIFDumper.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PIFDumper/PIFDumper.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[317/395] /usr/bin/g++ -DBlobFieldInitializerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/BlobFieldInitializer/CMakeFiles/BlobFieldInitializerShared.dir/BlobFieldInitializerProxy.cpp.o -MF core/CompuCell3D/steppables/BlobFieldInitializer/CMakeFiles/BlobFieldInitializerShared.dir/BlobFieldInitializerProxy.cpp.o.d -o core/CompuCell3D/steppables/BlobFieldInitializer/CMakeFiles/BlobFieldInitializerShared.dir/BlobFieldInitializerProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BlobFieldInitializer/BlobFieldInitializerProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BlobFieldInitializer/BlobFieldInitializer.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BlobFieldInitializer/BlobFieldInitializerProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[318/395] /usr/bin/g++ -DUniformFieldInitializerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/UniformFieldInitializer/CMakeFiles/UniformFieldInitializerShared.dir/UniformFieldInitializerProxy.cpp.o -MF core/CompuCell3D/steppables/UniformFieldInitializer/CMakeFiles/UniformFieldInitializerShared.dir/UniformFieldInitializerProxy.cpp.o.d -o core/CompuCell3D/steppables/UniformFieldInitializer/CMakeFiles/UniformFieldInitializerShared.dir/UniformFieldInitializerProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/UniformFieldInitializer/UniformFieldInitializerProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/UniformFieldInitializer/UniformFieldInitializer.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/UniformFieldInitializer/UniformFieldInitializerProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[319/395] /usr/bin/g++ -DBlobFieldInitializerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/BlobFieldInitializer/CMakeFiles/BlobFieldInitializerShared.dir/BlobFieldInitializer.cpp.o -MF core/CompuCell3D/steppables/BlobFieldInitializer/CMakeFiles/BlobFieldInitializerShared.dir/BlobFieldInitializer.cpp.o.d -o core/CompuCell3D/steppables/BlobFieldInitializer/CMakeFiles/BlobFieldInitializerShared.dir/BlobFieldInitializer.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BlobFieldInitializer/BlobFieldInitializer.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BlobFieldInitializer/BlobFieldInitializer.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BlobFieldInitializer/BlobFieldInitializer.cpp: In member function ‘virtual void CompuCell3D::BlobFieldInitializer::init(CompuCell3D::Simulator*, CC3DXMLElement*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BlobFieldInitializer/BlobFieldInitializer.cpp:85:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   85 |     for (int i = 0; i < regionVec.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BlobFieldInitializer/BlobFieldInitializer.cpp: In member function ‘void CompuCell3D::BlobFieldInitializer::layOutCells(const CompuCell3D::BlobFieldInitializerData&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BlobFieldInitializer/BlobFieldInitializer.cpp:139:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
  139 |     if (!(_initData.radius > 0 && 2 * _initData.radius < (dim.x - 2)))
      |     ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BlobFieldInitializer/BlobFieldInitializer.cpp:143:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
  143 |         Dim3D itDim = getBlobDimensions(dim, size);
      |         ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BlobFieldInitializer/BlobFieldInitializer.cpp: In member function ‘virtual void CompuCell3D::BlobFieldInitializer::start()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BlobFieldInitializer/BlobFieldInitializer.cpp:228:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::BlobFieldInitializerData>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  228 |         for (int i = 0; i < blobInitializerData.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BlobFieldInitializer/BlobFieldInitializer.cpp: In member function ‘void CompuCell3D::BlobFieldInitializer::initializeEngulfment()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BlobFieldInitializer/BlobFieldInitializer.cpp:306:38: warning: comparison of integer expressions of different signedness: ‘short int’ and ‘unsigned int’ [-Wsign-compare]
  306 |                     if (cell && pt.x < enData.engulfmentCutoff) {
      |                                 ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BlobFieldInitializer/BlobFieldInitializer.cpp:308:45: warning: comparison of integer expressions of different signedness: ‘short int’ and ‘unsigned int’ [-Wsign-compare]
  308 |                     } else if (cell && pt.x >= enData.engulfmentCutoff) {
      |                                        ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BlobFieldInitializer/BlobFieldInitializer.cpp:314:38: warning: comparison of integer expressions of different signedness: ‘short int’ and ‘unsigned int’ [-Wsign-compare]
  314 |                     if (cell && pt.y < enData.engulfmentCutoff) {
      |                                 ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BlobFieldInitializer/BlobFieldInitializer.cpp:316:45: warning: comparison of integer expressions of different signedness: ‘short int’ and ‘unsigned int’ [-Wsign-compare]
  316 |                     } else if (cell && pt.y >= enData.engulfmentCutoff) {
      |                                        ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BlobFieldInitializer/BlobFieldInitializer.cpp:321:38: warning: comparison of integer expressions of different signedness: ‘short int’ and ‘unsigned int’ [-Wsign-compare]
  321 |                     if (cell && pt.z < enData.engulfmentCutoff) {
      |                                 ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/BlobFieldInitializer/BlobFieldInitializer.cpp:323:45: warning: comparison of integer expressions of different signedness: ‘short int’ and ‘unsigned int’ [-Wsign-compare]
  323 |                     } else if (cell && pt.z >= enData.engulfmentCutoff) {
      |                                        ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
[320/395] /usr/bin/g++ -DUniformFieldInitializerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/UniformFieldInitializer/CMakeFiles/UniformFieldInitializerShared.dir/UniformFieldInitializer.cpp.o -MF core/CompuCell3D/steppables/UniformFieldInitializer/CMakeFiles/UniformFieldInitializerShared.dir/UniformFieldInitializer.cpp.o.d -o core/CompuCell3D/steppables/UniformFieldInitializer/CMakeFiles/UniformFieldInitializerShared.dir/UniformFieldInitializer.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/UniformFieldInitializer/UniformFieldInitializer.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/UniformFieldInitializer/UniformFieldInitializer.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/UniformFieldInitializer/UniformFieldInitializer.cpp: In member function ‘virtual void CompuCell3D::UniformFieldInitializer::init(CompuCell3D::Simulator*, CC3DXMLElement*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/UniformFieldInitializer/UniformFieldInitializer.cpp:35:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   35 |         for (int i = 0; i < regionVec.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/UniformFieldInitializer/UniformFieldInitializer.cpp:20:11: warning: variable ‘dim’ set but not used [-Wunused-but-set-variable=]
   20 |     Dim3D dim = cellFieldG->getDim();
      |           ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/UniformFieldInitializer/UniformFieldInitializer.cpp: In member function ‘virtual void CompuCell3D::UniformFieldInitializer::start()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/UniformFieldInitializer/UniformFieldInitializer.cpp:168:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::UniformFieldInitializerData>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  168 |         for (int i = 0; i < initDataVec.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/UniformFieldInitializer/UniformFieldInitializer.cpp:164:11: warning: variable ‘dim’ set but not used [-Wunused-but-set-variable=]
  164 |     Dim3D dim = cellField->getDim();
      |           ^~~
[321/395] /usr/bin/g++ -DPolygonFieldInitializerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/PolygonFieldInitializer/CMakeFiles/PolygonFieldInitializerShared.dir/PolygonFieldInitializerProxy.cpp.o -MF core/CompuCell3D/steppables/PolygonFieldInitializer/CMakeFiles/PolygonFieldInitializerShared.dir/PolygonFieldInitializerProxy.cpp.o.d -o core/CompuCell3D/steppables/PolygonFieldInitializer/CMakeFiles/PolygonFieldInitializerShared.dir/PolygonFieldInitializerProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PolygonFieldInitializer/PolygonFieldInitializerProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PolygonFieldInitializer/PolygonFieldInitializer.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PolygonFieldInitializer/PolygonFieldInitializerProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[322/395] /usr/bin/g++ -DTubeFieldInitializerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/TubeFieldInitializer/CMakeFiles/TubeFieldInitializerShared.dir/TubeFieldInitializerProxy.cpp.o -MF core/CompuCell3D/steppables/TubeFieldInitializer/CMakeFiles/TubeFieldInitializerShared.dir/TubeFieldInitializerProxy.cpp.o.d -o core/CompuCell3D/steppables/TubeFieldInitializer/CMakeFiles/TubeFieldInitializerShared.dir/TubeFieldInitializerProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializerProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializer.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializerProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializer.h: In constructor ‘CompuCell3D::TubeFieldInitializerData::TubeFieldInitializerData()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializer.h:40:23: warning: ‘CompuCell3D::TubeFieldInitializerData::cellShape’ will be initialized after [-Wreorder]
   40 |         CellShapeEnum cellShape;
      |                       ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializer.h:39:14: warning:   ‘bool CompuCell3D::TubeFieldInitializerData::randomize’ [-Wreorder]
   39 |         bool randomize;
      |              ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializer.h:27:9: warning:   when initialized here [-Wreorder]
   27 |         TubeFieldInitializerData() :
      |         ^~~~~~~~~~~~~~~~~~~~~~~~
[323/395] /usr/bin/g++ -DPolygonFieldInitializerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/PolygonFieldInitializer/CMakeFiles/PolygonFieldInitializerShared.dir/PolygonFieldInitializer.cpp.o -MF core/CompuCell3D/steppables/PolygonFieldInitializer/CMakeFiles/PolygonFieldInitializerShared.dir/PolygonFieldInitializer.cpp.o.d -o core/CompuCell3D/steppables/PolygonFieldInitializer/CMakeFiles/PolygonFieldInitializerShared.dir/PolygonFieldInitializer.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PolygonFieldInitializer/PolygonFieldInitializer.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PolygonFieldInitializer/PolygonFieldInitializer.cpp:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PolygonFieldInitializer/PolygonFieldInitializer.cpp: In member function ‘virtual void CompuCell3D::PolygonFieldInitializer::init(CompuCell3D::Simulator*, CC3DXMLElement*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PolygonFieldInitializer/PolygonFieldInitializer.cpp:45:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   45 |         for (int i = 0; i < regionVec.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PolygonFieldInitializer/PolygonFieldInitializer.cpp:62:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   62 |             for (int i = 0; i < edgesGroupsXMlList.size(); i++) {
      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PolygonFieldInitializer/PolygonFieldInitializer.cpp:65:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   65 |                 for (int j = 0; j < edgesXMlList.size(); j++) {
      |                                 ~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PolygonFieldInitializer/PolygonFieldInitializer.cpp: In member function ‘bool CompuCell3D::PolygonFieldInitializer::checkInside(Coordinates3D<double>, std::vector<Coordinates3D<double> >, std::vector<Coordinates3D<double> >)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PolygonFieldInitializer/PolygonFieldInitializer.cpp:206:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<Coordinates3D<double> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  206 |     for (int i = 0; i < srcPoints.size(); i++) {
      |                     ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PolygonFieldInitializer/PolygonFieldInitializer.cpp:205:9: warning: unused variable ‘numPointsAtSameLevelOf’ [-Wunused-variable]
  205 |     int numPointsAtSameLevelOf = 0;
      |         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PolygonFieldInitializer/PolygonFieldInitializer.cpp: In member function ‘virtual void CompuCell3D::PolygonFieldInitializer::start()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PolygonFieldInitializer/PolygonFieldInitializer.cpp:350:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::PolygonFieldInitializerData>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  350 |         for (int i = 0; i < initDataVec.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PolygonFieldInitializer/PolygonFieldInitializer.cpp:347:11: warning: variable ‘dim’ set but not used [-Wunused-but-set-variable=]
  347 |     Dim3D dim = cellField->getDim();
      |           ^~~
[324/395] /usr/bin/g++ -DTubeFieldInitializerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/TubeFieldInitializer/CMakeFiles/TubeFieldInitializerShared.dir/TubeFieldInitializer.cpp.o -MF core/CompuCell3D/steppables/TubeFieldInitializer/CMakeFiles/TubeFieldInitializerShared.dir/TubeFieldInitializer.cpp.o.d -o core/CompuCell3D/steppables/TubeFieldInitializer/CMakeFiles/TubeFieldInitializerShared.dir/TubeFieldInitializer.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializer.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializer.cpp:9:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializer.cpp:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializer.h: In constructor ‘CompuCell3D::TubeFieldInitializerData::TubeFieldInitializerData()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializer.h:40:23: warning: ‘CompuCell3D::TubeFieldInitializerData::cellShape’ will be initialized after [-Wreorder]
   40 |         CellShapeEnum cellShape;
      |                       ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializer.h:39:14: warning:   ‘bool CompuCell3D::TubeFieldInitializerData::randomize’ [-Wreorder]
   39 |         bool randomize;
      |              ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializer.h:27:9: warning:   when initialized here [-Wreorder]
   27 |         TubeFieldInitializerData() :
      |         ^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializer.cpp: In member function ‘virtual void CompuCell3D::TubeFieldInitializer::init(CompuCell3D::Simulator*, CC3DXMLElement*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializer.cpp:44:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CC3DXMLElement*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   44 |         for (int i = 0; i < regionVec.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializer.cpp:29:11: warning: variable ‘dim’ set but not used [-Wunused-but-set-variable=]
   29 |     Dim3D dim = cellFieldG->getDim();
      |           ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializer.cpp: In member function ‘void CompuCell3D::TubeFieldInitializer::layOutCellsWedge(const CompuCell3D::TubeFieldInitializerData&)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializer.cpp:301:15: warning: unused variable ‘NUM_RING_POINTS’ [-Wunused-variable]
  301 |     const int NUM_RING_POINTS = 60; //arbitrary
      |               ^~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializer.cpp: In member function ‘virtual void CompuCell3D::TubeFieldInitializer::start()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializer.cpp:421:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::TubeFieldInitializerData>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  421 |         for (int i = 0; i < initDataVec.size(); ++i) {
      |                         ~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializer.cpp:417:11: warning: variable ‘dim’ set but not used [-Wunused-but-set-variable=]
  417 |     Dim3D dim = cellField->getDim();
      |           ^~~
[325/395] /usr/bin/g++ -DFoamDataOutputShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/FoamDataOutput/CMakeFiles/FoamDataOutputShared.dir/FoamDataOutput.cpp.o -MF core/CompuCell3D/steppables/FoamDataOutput/CMakeFiles/FoamDataOutputShared.dir/FoamDataOutput.cpp.o.d -o core/CompuCell3D/steppables/FoamDataOutput/CMakeFiles/FoamDataOutputShared.dir/FoamDataOutput.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FoamDataOutput/FoamDataOutput.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FoamDataOutput/FoamDataOutput.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[326/395] /usr/bin/g++ -DFoamDataOutputShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/FoamDataOutput/CMakeFiles/FoamDataOutputShared.dir/FoamDataOutputProxy.cpp.o -MF core/CompuCell3D/steppables/FoamDataOutput/CMakeFiles/FoamDataOutputShared.dir/FoamDataOutputProxy.cpp.o.d -o core/CompuCell3D/steppables/FoamDataOutput/CMakeFiles/FoamDataOutputShared.dir/FoamDataOutputProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FoamDataOutput/FoamDataOutputProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FoamDataOutput/FoamDataOutput.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/FoamDataOutput/FoamDataOutputProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[327/395] /usr/bin/g++ -DObjInitializerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/ObjInitializer/CMakeFiles/ObjInitializerShared.dir/ObjInitializerProxy.cpp.o -MF core/CompuCell3D/steppables/ObjInitializer/CMakeFiles/ObjInitializerShared.dir/ObjInitializerProxy.cpp.o.d -o core/CompuCell3D/steppables/ObjInitializer/CMakeFiles/ObjInitializerShared.dir/ObjInitializerProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/ObjInitializer/ObjInitializerProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/ObjInitializer/ObjInitializer.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/ObjInitializer/ObjInitializerProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[328/395] /usr/bin/g++ -DObjInitializerShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/ObjInitializer/CMakeFiles/ObjInitializerShared.dir/ObjInitializer.cpp.o -MF core/CompuCell3D/steppables/ObjInitializer/CMakeFiles/ObjInitializerShared.dir/ObjInitializer.cpp.o.d -o core/CompuCell3D/steppables/ObjInitializer/CMakeFiles/ObjInitializerShared.dir/ObjInitializer.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/ObjInitializer/ObjInitializer.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/ObjInitializer/ObjInitializer.cpp:1:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[329/395] /usr/bin/g++ -DRandomInitializersShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/RandomInitializers/CMakeFiles/RandomInitializersShared.dir/RandomBlobInitializer.cpp.o -MF core/CompuCell3D/steppables/RandomInitializers/CMakeFiles/RandomInitializersShared.dir/RandomBlobInitializer.cpp.o.d -o core/CompuCell3D/steppables/RandomInitializers/CMakeFiles/RandomInitializersShared.dir/RandomBlobInitializer.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/RandomBlobInitializer.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/RandomBlobInitializer.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/RandomBlobInitializer.cpp:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/RandomBlobInitializer.h: In constructor ‘CompuCell3D::RandomBlobInitializer::RandomBlobInitializer()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/RandomBlobInitializer.h:29:36: warning: ‘CompuCell3D::RandomBlobInitializer::cellField’ will be initialized after [-Wreorder]
   29 |         WatchableField3D<CellG *> *cellField;
      |                                    ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/RandomBlobInitializer.h:28:51: warning:   ‘CompuCell3D::ExtraMembersGroupAccessor<CompuCell3D::PixelTracker>* CompuCell3D::RandomBlobInitializer::pixelTrackerAccessorPtr’ [-Wreorder]
   28 |         ExtraMembersGroupAccessor <PixelTracker> *pixelTrackerAccessorPtr;
      |                                                   ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/RandomBlobInitializer.cpp:11:1: warning:   when initialized here [-Wreorder]
   11 | RandomBlobInitializer::RandomBlobInitializer() :
      | ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/RandomBlobInitializer.cpp:21:5: warning: left operand of comma operator has no effect [-Wunused-value]
   21 |     ndiv, growsteps = 0;
      |     ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/RandomBlobInitializer.cpp: In member function ‘void CompuCell3D::RandomBlobInitializer::divide()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/RandomBlobInitializer.cpp:160:12: warning: unused variable ‘cell’ [-Wunused-variable]
  160 |     CellG *cell;
      |            ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/RandomBlobInitializer.cpp:161:12: warning: unused variable ‘child’ [-Wunused-variable]
  161 |     CellG *child;
      |            ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/RandomBlobInitializer.cpp:162:19: warning: unused variable ‘pixelTracker’ [-Wunused-variable]
  162 |     PixelTracker *pixelTracker;
      |                   ^~~~~~~~~~~~
[330/395] /usr/bin/g++ -DRandomInitializersShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/RandomInitializers/CMakeFiles/RandomInitializersShared.dir/FieldBuilder.cpp.o -MF core/CompuCell3D/steppables/RandomInitializers/CMakeFiles/RandomInitializersShared.dir/FieldBuilder.cpp.o.d -o core/CompuCell3D/steppables/RandomInitializers/CMakeFiles/RandomInitializersShared.dir/FieldBuilder.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/FieldBuilder.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/FieldBuilder.cpp:9:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/FieldBuilder.cpp: In member function ‘void FieldBuilder::addCell()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/FieldBuilder.cpp:46:9: warning: unused variable ‘type’ [-Wunused-variable]
   46 |     int type, n;
      |         ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/FieldBuilder.cpp:46:15: warning: variable ‘n’ set but not used [-Wunused-but-set-variable=]
   46 |     int type, n;
      |               ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/FieldBuilder.cpp: In member function ‘void FieldBuilder::setNeighborListSO()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/FieldBuilder.cpp:82:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   82 |     for (int z = 0; z < subZ.size(); z++)
      |                     ~~^~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/FieldBuilder.cpp:83:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   83 |         for (int y = 0; y < subY.size(); y++)
      |                         ~~^~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/FieldBuilder.cpp:84:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   84 |             for (int x = 0; x < subX.size(); x++) {
      |                             ~~^~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/FieldBuilder.cpp: In member function ‘void FieldBuilder::setTypeVec(int, std::vector<std::__cxx11::basic_string<char> >, std::vector<std::__cxx11::basic_string<char> >)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/FieldBuilder.cpp:234:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  234 |     for (i = 0; i < sz; i++) { valsum += atof(biasVec[i].c_str()); }
      |                 ~~^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/FieldBuilder.cpp:235:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  235 |     for (i = 0; i < sz; i++) {
      |                 ~~^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/FieldBuilder.cpp:243:27: warning: comparison of integer expressions of different signedness: ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  243 |     while (typeVec.size() < ncells) {
      |            ~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/FieldBuilder.cpp:247:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  247 |         if (i > sz) { i = 0; }
      |             ~~^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/FieldBuilder.cpp: In member function ‘void FieldBuilder::setTypeVec(int, std::vector<std::__cxx11::basic_string<char> >)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/FieldBuilder.cpp:256:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  256 |     for (i = 0; i < sz; i++) {
      |                 ~~^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/FieldBuilder.cpp:266:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  266 |         if (i >= sz) { i = 0; }
      |             ~~^~~~~
[331/395] /usr/bin/g++ -DRandomInitializersShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/RandomInitializers/CMakeFiles/RandomInitializersShared.dir/RandomInitializerProxy.cpp.o -MF core/CompuCell3D/steppables/RandomInitializers/CMakeFiles/RandomInitializersShared.dir/RandomInitializerProxy.cpp.o.d -o core/CompuCell3D/steppables/RandomInitializers/CMakeFiles/RandomInitializersShared.dir/RandomInitializerProxy.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/RandomInitializerProxy.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/RandomFieldInitializer.h:8,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/RandomInitializerProxy.cpp:3:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
[332/395] /usr/bin/g++ -DRandomInitializersShared_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/usr/include/python3.14 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/CompuCell3D/steppables/RandomInitializers/CMakeFiles/RandomInitializersShared.dir/RandomFieldInitializer.cpp.o -MF core/CompuCell3D/steppables/RandomInitializers/CMakeFiles/RandomInitializersShared.dir/RandomFieldInitializer.cpp.o.d -o core/CompuCell3D/steppables/RandomInitializers/CMakeFiles/RandomInitializersShared.dir/RandomFieldInitializer.cpp.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/RandomFieldInitializer.cpp
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/RandomFieldInitializer.cpp:2:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/vector:64,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:4:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:7:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/RandomFieldInitializer.cpp: In constructor ‘CompuCell3D::RandomFieldInitializer::RandomFieldInitializer()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/RandomInitializers/RandomFieldInitializer.cpp:19:5: warning: left operand of comma operator has no effect [-Wunused-value]
   19 |     ncells, growsteps = 0;
      |     ^~~~~~
[333/395] cd /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DXML && /usr/bin/cmake -E make_directory /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DXML/CMakeFiles/CC3DXML.dir /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DXML /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DXML/CMakeFiles/CC3DXML.dir && /usr/bin/cmake -E env SWIG_LIB=/usr/share/swig/4.4.1 /usr/bin/swig -python -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/usr/include/python3.14 -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/CC3DXML -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/XMLUtils -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -outdir /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DXML -c++ -interface _CC3DXML -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -o /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DXML/CMakeFiles/CC3DXML.dir/CC3DXMLPYTHON_wrap.cxx /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/CC3DXML/CC3DXML.i
[334/395] cd /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/SerializerDE && /usr/bin/cmake -E make_directory /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/SerializerDE/CMakeFiles/SerializerDEPy.dir /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/SerializerDE /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/SerializerDE/CMakeFiles/SerializerDEPy.dir && /usr/bin/cmake -E env SWIG_LIB=/usr/share/swig/4.4.1 /usr/bin/swig -python -outdir /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/SerializerDE -c++ -interface _SerializerDEPy -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -o /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/SerializerDE/CMakeFiles/SerializerDEPy.dir/SerializerDEPyPYTHON_wrap.cxx /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE/SerializerDEPy.i
[335/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/CellTypeMonitor/CMakeFiles/CellTypeMonitorShared.dir/link.d -Wl,-soname,libCC3DCellTypeMonitor.so.4.9 -o core/CompuCell3D/plugins/CellTypeMonitor/libCC3DCellTypeMonitor.so.4.9.0 core/CompuCell3D/plugins/CellTypeMonitor/CMakeFiles/CellTypeMonitorShared.dir/CellTypeMonitorPlugin.cpp.o core/CompuCell3D/plugins/CellTypeMonitor/CMakeFiles/CellTypeMonitorShared.dir/CellTypeMonitorPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[336/395] cd /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/PlayerPythonNew && /usr/bin/cmake -E make_directory /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/PlayerPythonNew/CMakeFiles/PlayerPythonNew.dir /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/PlayerPythonNew /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/PlayerPythonNew/CMakeFiles/PlayerPythonNew.dir && /usr/bin/cmake -E env SWIG_LIB=/usr/share/swig/4.4.1 /usr/bin/swig -python -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/usr/include/python3.14 -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/usr/include/vtk -I/usr/include/vtk/ -I/usr/include -I/usr/include/vtk/vtkscn/include -I/usr/include/vtk/vtkscn -I/usr/include/vtk/token -I/usr/include/vtk/vtkkissfft -outdir /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/PlayerPythonNew -c++ -interface _PlayerPython -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -o /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/PlayerPythonNew/CMakeFiles/PlayerPythonNew.dir/PlayerPythonPYTHON_wrap.cxx /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/PlayerPython.i
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Utils/Coordinates3D.h:49: Warning 362: operator= ignored
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/ndarray_adapter.h:73: Warning 389: operator[] ignored (consider using %extend)
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/ndarray_adapter.h:210: Warning 389: operator[] ignored (consider using %extend)
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:41: Warning 401: Nothing known about base class 'VectorField3D< float >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:41: Warning 401: Maybe you forgot to instantiate 'VectorField3D< float >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:41: Warning 401: Nothing known about base class 'NumpyArrayWrapperImpl< float >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:41: Warning 401: Maybe you forgot to instantiate 'NumpyArrayWrapperImpl< float >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:41: Warning 401: Nothing known about base class 'VectorField3D< double >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:41: Warning 401: Maybe you forgot to instantiate 'VectorField3D< double >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:41: Warning 401: Nothing known about base class 'NumpyArrayWrapperImpl< double >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:41: Warning 401: Maybe you forgot to instantiate 'NumpyArrayWrapperImpl< double >' using %template.
[337/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/Volume/CMakeFiles/VolumeShared.dir/link.d -Wl,-soname,libCC3DVolume.so.4.9 -o core/CompuCell3D/plugins/Volume/libCC3DVolume.so.4.9.0 core/CompuCell3D/plugins/Volume/CMakeFiles/VolumeShared.dir/VolumePlugin.cpp.o core/CompuCell3D/plugins/Volume/CMakeFiles/VolumeShared.dir/VolumePluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[338/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/Contact/CMakeFiles/ContactShared.dir/link.d -Wl,-soname,libCC3DContact.so.4.9 -o core/CompuCell3D/plugins/Contact/libCC3DContact.so.4.9.0 core/CompuCell3D/plugins/Contact/CMakeFiles/ContactShared.dir/ContactPlugin.cpp.o core/CompuCell3D/plugins/Contact/CMakeFiles/ContactShared.dir/ContactPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[339/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/ChemotaxisSimple/CMakeFiles/ChemotaxisSimpleShared.dir/link.d -Wl,-soname,libCC3DChemotaxisSimple.so.4.9 -o core/CompuCell3D/plugins/ChemotaxisSimple/libCC3DChemotaxisSimple.so.4.9.0 core/CompuCell3D/plugins/ChemotaxisSimple/CMakeFiles/ChemotaxisSimpleShared.dir/ChemotaxisSimpleEnergy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[340/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/Surface/CMakeFiles/SurfaceShared.dir/link.d -Wl,-soname,libCC3DSurface.so.4.9 -o core/CompuCell3D/plugins/Surface/libCC3DSurface.so.4.9.0 core/CompuCell3D/plugins/Surface/CMakeFiles/SurfaceShared.dir/SurfacePlugin.cpp.o core/CompuCell3D/plugins/Surface/CMakeFiles/SurfaceShared.dir/SurfacePluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../SurfaceTracker:\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/plugins/SurfaceTracker/libCC3DSurfaceTracker.so.4.9.0  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  -ldl  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
In member function ‘getNewOldSurfaceDiffs’:
lto1: note: parameter passing for argument of type ‘struct pair’ when C++17 is enabled changed to match C++14 in GCC 10.1
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[342/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/ConvergentExtension/CMakeFiles/ConvergentExtensionShared.dir/link.d -Wl,-soname,libCC3DConvergentExtension.so.4.9 -o core/CompuCell3D/plugins/ConvergentExtension/libCC3DConvergentExtension.so.4.9.0 core/CompuCell3D/plugins/ConvergentExtension/CMakeFiles/ConvergentExtensionShared.dir/ConvergentExtensionPlugin.cpp.o core/CompuCell3D/plugins/ConvergentExtension/CMakeFiles/ConvergentExtensionShared.dir/ConvergentExtensionPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[343/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/ExternalPotential/CMakeFiles/ExternalPotentialShared.dir/link.d -Wl,-soname,libCC3DExternalPotential.so.4.9 -o core/CompuCell3D/plugins/ExternalPotential/libCC3DExternalPotential.so.4.9.0 core/CompuCell3D/plugins/ExternalPotential/CMakeFiles/ExternalPotentialShared.dir/ExternalPotentialPlugin.cpp.o core/CompuCell3D/plugins/ExternalPotential/CMakeFiles/ExternalPotentialShared.dir/ExternalPotentialPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[344/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/Curvature/CMakeFiles/CurvatureShared.dir/link.d -Wl,-soname,libCC3DCurvature.so.4.9 -o core/CompuCell3D/plugins/Curvature/libCC3DCurvature.so.4.9.0 core/CompuCell3D/plugins/Curvature/CMakeFiles/CurvatureShared.dir/CurvaturePlugin.cpp.o core/CompuCell3D/plugins/Curvature/CMakeFiles/CurvatureShared.dir/CurvaturePluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[345/395] cd /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields && /usr/bin/cmake -E make_directory /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir && /usr/bin/cmake -E env SWIG_LIB=/usr/share/swig/4.4.1 /usr/bin/swig -python -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/usr/include/python3.14 -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/CC3DAuxFields -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -outdir /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields -c++ -interface _CC3DAuxFields -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -o /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/CC3DAuxFields/CC3DAuxFields.i
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Point3D.h:36: Warning 362: operator= ignored
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Dim3D.h:23: Warning 362: operator= ignored
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Dim3D.h:43: Warning 389: operator[] ignored (consider using %extend)
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:113: Warning 389: operator[] ignored (consider using %extend)
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/ndarray_adapter.h:73: Warning 389: operator[] ignored (consider using %extend)
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/ndarray_adapter.h:210: Warning 389: operator[] ignored (consider using %extend)
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Utils/Coordinates3D.h:49: Warning 362: operator= ignored
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorField3D.h:127: Warning 389: operator[] ignored (consider using %extend)
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapperImpl.h:25: Warning 302: Redefinition of identifier 'array_size_t' as CompuCell3D::array_size_t ignored,
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper.h:22: Warning 302: previous definition of 'array_size_t' as CompuCell3D::array_size_t.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:33: Warning 302: Redefinition of identifier 'array_size_t' as CompuCell3D::array_size_t ignored,
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper.h:22: Warning 302: previous definition of 'array_size_t' as CompuCell3D::array_size_t.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:36: Warning 302: Redefinition of identifier 'array_size_t' as CompuCell3D::array_size_t ignored,
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper.h:22: Warning 302: previous definition of 'array_size_t' as CompuCell3D::array_size_t.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3DTypeBase'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3DTypeBase'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3D< char >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'Field3D< char >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3DTypeBase'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3D< unsigned char >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'Field3D< unsigned char >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3DTypeBase'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3D< short >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'Field3D< short >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3DTypeBase'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3D< unsigned short >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'Field3D< unsigned short >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3DTypeBase'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3D< int >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'Field3D< int >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3DTypeBase'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3D< unsigned int >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'Field3D< unsigned int >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3DTypeBase'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3D< long >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'Field3D< long >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3DTypeBase'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3D< unsigned long >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'Field3D< unsigned long >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3DTypeBase'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:41: Warning 401: Nothing known about base class 'VectorField3D< double >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:41: Warning 401: Maybe you forgot to instantiate 'VectorField3D< double >' using %template.
[346/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/ContactInternal/CMakeFiles/ContactInternalShared.dir/link.d -Wl,-soname,libCC3DContactInternal.so.4.9 -o core/CompuCell3D/plugins/ContactInternal/libCC3DContactInternal.so.4.9.0 core/CompuCell3D/plugins/ContactInternal/CMakeFiles/ContactInternalShared.dir/ContactInternalPlugin.cpp.o core/CompuCell3D/plugins/ContactInternal/CMakeFiles/ContactInternalShared.dir/ContactInternalPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[347/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/Compartment/CMakeFiles/CompartmentShared.dir/link.d -Wl,-soname,libCC3DCompartment.so.4.9 -o core/CompuCell3D/plugins/Compartment/libCC3DCompartment.so.4.9.0 core/CompuCell3D/plugins/Compartment/CMakeFiles/CompartmentShared.dir/CompartmentPlugin.cpp.o core/CompuCell3D/plugins/Compartment/CMakeFiles/CompartmentShared.dir/CompartmentPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[348/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/Connectivity/CMakeFiles/ConnectivityShared.dir/link.d -Wl,-soname,libCC3DConnectivity.so.4.9 -o core/CompuCell3D/plugins/Connectivity/libCC3DConnectivity.so.4.9.0 core/CompuCell3D/plugins/Connectivity/CMakeFiles/ConnectivityShared.dir/ConnectivityPlugin.cpp.o core/CompuCell3D/plugins/Connectivity/CMakeFiles/ConnectivityShared.dir/ConnectivityPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[349/395] cd /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython && /usr/bin/cmake -E make_directory /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir && /usr/bin/cmake -E env SWIG_LIB=/usr/share/swig/4.4.1 /usr/bin/swig -python -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/usr/include -I/usr/include/python3.14 -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/CompuCellPython -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build -outdir /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython -c++ -interface _CompuCell -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/usr/include -o /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/CompuCellPython/CompuCell.i
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Point3D.h:36: Warning 362: operator= ignored
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Dim3D.h:23: Warning 362: operator= ignored
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Dim3D.h:43: Warning 389: operator[] ignored (consider using %extend)
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Utils/Coordinates3D.h:49: Warning 362: operator= ignored
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:113: Warning 389: operator[] ignored (consider using %extend)
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:158: Warning 362: operator= ignored
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/Vector3.h:23: Warning 389: operator[] ignored (consider using %extend)
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/Vector3.h:27: Warning 389: operator[] ignored (consider using %extend)
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/Vector3.h:79: Warning 362: operator= ignored
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/CompuCellPython/CompuCell.i:1004: Warning 404: Duplicate template instantiation of 'map< long,CellG * >' with name 'mapLongCellGPtr' ignored,
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/CompuCellPython/CompuCell.i:767: Warning 404: previous instantiation of 'map< long,CompuCell3D::CellG * >' with name 'mapLongCellGPtr'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:26: Warning 314: 'lambda' is a python keyword, renaming to '_lambda'
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PlasticityTracker/PlasticityTrackerPlugin.h:58: Warning 362: operator= ignored
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PlasticityTracker/PlasticityTrackerPlugin.h:144: Warning 362: operator= ignored
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/CompuCellPython/CompuCellExtraDeclarations.i:372: Warning 302: Redefinition of identifier 'focalPointPlasticitySetPyItr' (Renamed from 'STLPyIterator') as STLPyIterator< std::set< CompuCell3D::FocalPointPlasticityTrackerData > > ignored,
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/CompuCellPython/CompuCellExtraDeclarations.i:371: Warning 302: previous definition of 'focalPointPlasticitySetPyItr' (Renamed from 'STLPyIteratorRefRetType') as STLPyIteratorRefRetType< std::set< CompuCell3D::FocalPointPlasticityTrackerData >,CompuCell3D::FocalPointPlasticityTrackerData >.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Data.h:22: Warning 314: 'lambda' is a python keyword, renaming to '_lambda'
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:1464: Warning 389: operator[] ignored (consider using %extend)
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3D< double >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'Field3D< double >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'NumpyArrayWrapperImpl< double >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'NumpyArrayWrapperImpl< double >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Base class 'Field3D< float >' undefined.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/CompuCellPython/CompuCell.i:735: Warning 401: 'Field3D< float >' must be defined before it is used as a base class.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'NumpyArrayWrapperImpl< float >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'NumpyArrayWrapperImpl< float >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3D< char >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'Field3D< char >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'NumpyArrayWrapperImpl< char >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'NumpyArrayWrapperImpl< char >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3D< unsigned char >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'Field3D< unsigned char >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'NumpyArrayWrapperImpl< unsigned char >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'NumpyArrayWrapperImpl< unsigned char >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3D< short >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'Field3D< short >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'NumpyArrayWrapperImpl< short >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'NumpyArrayWrapperImpl< short >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3D< unsigned short >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'Field3D< unsigned short >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'NumpyArrayWrapperImpl< unsigned short >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'NumpyArrayWrapperImpl< unsigned short >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Base class 'Field3D< int >' undefined.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/CompuCellPython/CompuCell.i:737: Warning 401: 'Field3D< int >' must be defined before it is used as a base class.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'NumpyArrayWrapperImpl< int >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'NumpyArrayWrapperImpl< int >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3D< unsigned int >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'Field3D< unsigned int >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'NumpyArrayWrapperImpl< unsigned int >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'NumpyArrayWrapperImpl< unsigned int >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3D< long >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'Field3D< long >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'NumpyArrayWrapperImpl< long >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'NumpyArrayWrapperImpl< long >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'Field3D< unsigned long >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'Field3D< unsigned long >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Nothing known about base class 'NumpyArrayWrapperImpl< unsigned long >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:36: Warning 401: Maybe you forgot to instantiate 'NumpyArrayWrapperImpl< unsigned long >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:41: Warning 401: Nothing known about base class 'VectorField3D< float >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:41: Warning 401: Maybe you forgot to instantiate 'VectorField3D< float >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:41: Warning 401: Nothing known about base class 'NumpyArrayWrapperImpl< float >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:41: Warning 401: Maybe you forgot to instantiate 'NumpyArrayWrapperImpl< float >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:41: Warning 401: Nothing known about base class 'VectorField3D< double >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:41: Warning 401: Maybe you forgot to instantiate 'VectorField3D< double >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:41: Warning 401: Nothing known about base class 'NumpyArrayWrapperImpl< double >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:41: Warning 401: Maybe you forgot to instantiate 'NumpyArrayWrapperImpl< double >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:94: Warning 401: Base class 'SteerableObject' undefined.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SteerableObject.h:13: Warning 401: 'SteerableObject' must be defined before it is used as a base class.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Steppable.h:9: Warning 401: Nothing known about base class 'SimObject'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/EnergyFunctionPyWrapper.h:11: Warning 402: Base class 'EnergyFunction' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:24: Warning 402: Only forward declaration 'EnergyFunction' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/StepperPyWrapper.h:11: Warning 402: Base class 'Stepper' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:34: Warning 402: Only forward declaration 'Stepper' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin/PyAttributeAdder.h:9: Warning 402: Base class 'AttributeAdder' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:44: Warning 402: Only forward declaration 'AttributeAdder' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityLocalFlex/ConnectivityLocalFlexPlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityLocalFlex/ConnectivityLocalFlexPlugin.h:0: Warning 402: Base class 'EnergyFunction' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:24: Warning 402: Only forward declaration 'EnergyFunction' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityGlobal/ConnectivityGlobalPlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ConnectivityGlobal/ConnectivityGlobalPlugin.h:0: Warning 402: Base class 'EnergyFunction' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:24: Warning 402: Only forward declaration 'EnergyFunction' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h:33: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h:33: Warning 402: Base class 'EnergyFunction' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:24: Warning 402: Only forward declaration 'EnergyFunction' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.h:0: Warning 402: Base class 'EnergyFunction' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:24: Warning 402: Only forward declaration 'EnergyFunction' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.h:14: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.h:15: Warning 402: Base class 'Stepper' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:34: Warning 402: Only forward declaration 'Stepper' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VolumeTracker/VolumeTrackerPlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VolumeTracker/VolumeTrackerPlugin.h:0: Warning 402: Base class 'Stepper' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:34: Warning 402: Only forward declaration 'Stepper' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CenterOfMass/CenterOfMassPlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PixelTracker/PixelTrackerPlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTrackerPlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalFlex/ContactLocalFlexPlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalFlex/ContactLocalFlexPlugin.h:0: Warning 402: Base class 'EnergyFunction' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:24: Warning 402: Only forward declaration 'EnergyFunction' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.h:0: Warning 402: Base class 'EnergyFunction' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:24: Warning 402: Only forward declaration 'EnergyFunction' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.h:0: Warning 402: Base class 'EnergyFunction' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:24: Warning 402: Only forward declaration 'EnergyFunction' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.h:0: Warning 402: Base class 'EnergyFunction' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:24: Warning 402: Only forward declaration 'EnergyFunction' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellOrientation/CellOrientationPlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CellOrientation/CellOrientationPlugin.h:0: Warning 402: Base class 'EnergyFunction' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:24: Warning 402: Only forward declaration 'EnergyFunction' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PolarizationVector/PolarizationVectorPlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ElasticityTracker/ElasticityTrackerPlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PlasticityTracker/PlasticityTrackerPlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.h:0: Warning 402: Base class 'EnergyFunction' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:24: Warning 402: Only forward declaration 'EnergyFunction' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/MomentOfInertia/MomentOfInertiaPlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/SecretionPlugin.h:0: Warning 402: Base class 'FixedStepper' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:36: Warning 402: Only forward declaration 'FixedStepper' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VectorFieldPolarization/VectorFieldPolarizationPlugin.h:25: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VectorFieldPolarization/VectorFieldPolarizationPlugin.h:25: Warning 402: Base class 'EnergyFunction' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:24: Warning 402: Only forward declaration 'EnergyFunction' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ImplicitMotility/ImplicitMotilityPlugin.h:49: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ImplicitMotility/ImplicitMotilityPlugin.h:49: Warning 402: Base class 'EnergyFunction' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:24: Warning 402: Only forward declaration 'EnergyFunction' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.h:33: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth/OrientedGrowthPlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth/OrientedGrowthPlugin.h:0: Warning 402: Base class 'EnergyFunction' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:24: Warning 402: Only forward declaration 'EnergyFunction' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth/OrientedGrowthPlugin.h:0: Warning 402: Base class 'Stepper' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:34: Warning 402: Only forward declaration 'Stepper' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2Plugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2Plugin.h:0: Warning 402: Base class 'EnergyFunction' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:24: Warning 402: Only forward declaration 'EnergyFunction' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2Plugin.h:0: Warning 402: Base class 'Stepper' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:34: Warning 402: Only forward declaration 'Stepper' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.h:0: Warning 402: Base class 'EnergyFunction' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:24: Warning 402: Only forward declaration 'EnergyFunction' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:952: Warning 401: Nothing known about base class 'CompuCell3D::Field3DImpl< unsigned char >'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:952: Warning 401: Maybe you forgot to instantiate 'CompuCell3D::Field3DImpl< unsigned char >' using %template.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.h:27: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Polarization23/Polarization23Plugin.h:0: Warning 402: Base class 'EnergyFunction' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:24: Warning 402: Only forward declaration 'EnergyFunction' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.h:0: Warning 402: Base class 'EnergyFunction' is incomplete.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:24: Warning 402: Only forward declaration 'EnergyFunction' was found.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerPlugin.h:0: Warning 401: Nothing known about base class 'Plugin'. Ignored.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Neighbor.h:24: Warning 472: Overloaded method CompuCell3D::Neighbor::Neighbor(CompuCell3D::Point3D const,double const,Coordinates3D< double > const) with no explicit typecheck typemap for arg 0 of type 'CompuCell3D::Point3D const'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Neighbor.h:24: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Neighbor.h:24: Warning 472: Overloaded method CompuCell3D::Neighbor::Neighbor(CompuCell3D::Point3D const,double const,Coordinates3D< double > const) with no explicit typecheck typemap for arg 2 of type 'Coordinates3D< double > const'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Neighbor.h:24: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:194: Warning 472: Overloaded method CompuCell3D::Potts3D::Potts3D(CompuCell3D::Dim3D const) with no explicit typecheck typemap for arg 0 of type 'CompuCell3D::Dim3D const'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:194: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/Vector3.h:26: Warning 509: Overloaded method Vector3::operator ()(int) effectively ignored,
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/Vector3.h:22: Warning 509: as it is shadowed by Vector3::operator ()(int) const.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/Vector3.h:140: Warning 503: Can't wrap 'operator +' unless renamed to a valid identifier.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/Vector3.h:143: Warning 503: Can't wrap 'operator -' unless renamed to a valid identifier.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/Vector3.h:146: Warning 503: Can't wrap 'operator *' unless renamed to a valid identifier.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/Vector3.h:149: Warning 503: Can't wrap 'operator *' unless renamed to a valid identifier.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/Vector3.h:150: Warning 503: Can't wrap 'operator *' unless renamed to a valid identifier.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/Vector3.h:268: Warning 503: Can't wrap 'operator <<' unless renamed to a valid identifier.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.h:24: Warning 472: Overloaded method CompuCell3D::PixelTrackerData::PixelTrackerData(CompuCell3D::Point3D) with no explicit typecheck typemap for arg 0 of type 'CompuCell3D::Point3D'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.h:24: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PixelTracker/PixelTrackerPlugin.h:21: Warning 472: Overloaded method CompuCell3D::BoundaryPixelTrackerData::BoundaryPixelTrackerData(CompuCell3D::Point3D) with no explicit typecheck typemap for arg 0 of type 'CompuCell3D::Point3D'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/PixelTracker/PixelTrackerPlugin.h:21: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:119: Warning 509: Overloaded method CompuCell3D::FocalPointPlasticityLinkBase::getOtherCell(CompuCell3D::CellG const *) effectively ignored,
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:117: Warning 509: as it is shadowed by CompuCell3D::FocalPointPlasticityLinkBase::getOtherCell(CompuCell3D::CellG *).
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/MomentOfInertia/MomentOfInertiaPlugin.h:48: Warning 472: Overloaded method CompuCell3D::FieldSecretorPixelData::FieldSecretorPixelData(CompuCell3D::Point3D) with no explicit typecheck typemap for arg 0 of type 'CompuCell3D::Point3D'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/MomentOfInertia/MomentOfInertiaPlugin.h:48: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:534: Warning 472: Overloaded method CompuCell3D::ReactionDiffusionSolverFVM::setDiffusivityFieldPtVal(std::string,CompuCell3D::Point3D,float) with no explicit typecheck typemap for arg 2 of type 'CompuCell3D::Point3D'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:534: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:545: Warning 472: Overloaded method CompuCell3D::ReactionDiffusionSolverFVM::setDiffusivityFieldPtVal(std::string,CompuCell3D::Point3D,float) with no explicit typecheck typemap for arg 2 of type 'CompuCell3D::Point3D'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:545: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:554: Warning 472: Overloaded method CompuCell3D::ReactionDiffusionSolverFVM::getConcentrationFieldPtVal(std::string,CompuCell3D::Point3D) with no explicit typecheck typemap for arg 2 of type 'CompuCell3D::Point3D'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:554: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:564: Warning 472: Overloaded method CompuCell3D::ReactionDiffusionSolverFVM::getConcentrationFieldPtVal(std::string,CompuCell3D::Point3D) with no explicit typecheck typemap for arg 2 of type 'CompuCell3D::Point3D'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:564: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:573: Warning 472: Overloaded method CompuCell3D::ReactionDiffusionSolverFVM::setConcentrationFieldPtVal(std::string,CompuCell3D::Point3D,float) with no explicit typecheck typemap for arg 2 of type 'CompuCell3D::Point3D'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:573: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:583: Warning 472: Overloaded method CompuCell3D::ReactionDiffusionSolverFVM::setConcentrationFieldPtVal(std::string,CompuCell3D::Point3D,float) with no explicit typecheck typemap for arg 2 of type 'CompuCell3D::Point3D'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:583: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:608: Warning 472: Overloaded method CompuCell3D::ReactionDiffusionSolverFVM::useFixedFluxSurface(std::string,std::string,float,std::vector< float,std::allocator< float > >) with no explicit typecheck typemap for arg 4 of type 'CompuCell3D::Point3D'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:608: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:645: Warning 472: Overloaded method CompuCell3D::ReactionDiffusionSolverFVM::useFixedConcentration(std::string,std::string,float,std::vector< float,std::allocator< float > >) with no explicit typecheck typemap for arg 4 of type 'CompuCell3D::Point3D'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:645: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:684: Warning 472: Overloaded method CompuCell3D::ReactionDiffusionSolverFVM::useFixedFVConcentration(std::string,float,std::vector< float,std::allocator< float > >) with no explicit typecheck typemap for arg 3 of type 'CompuCell3D::Point3D'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:684: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:706: Warning 472: Overloaded method CompuCell3D::ReactionDiffusionSolverFVM::useDiffusiveSurface(std::string,std::string,CompuCell3D::Point3D) with no explicit typecheck typemap for arg 3 of type 'CompuCell3D::Point3D'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:706: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:715: Warning 472: Overloaded method CompuCell3D::ReactionDiffusionSolverFVM::useDiffusiveSurface(std::string,std::string,CompuCell3D::Point3D) with no explicit typecheck typemap for arg 3 of type 'CompuCell3D::Point3D'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:715: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:723: Warning 472: Overloaded method CompuCell3D::ReactionDiffusionSolverFVM::useDiffusiveSurfaces(std::string) with no explicit typecheck typemap for arg 2 of type 'CompuCell3D::Point3D'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:723: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:731: Warning 472: Overloaded method CompuCell3D::ReactionDiffusionSolverFVM::useDiffusiveSurfaces(std::string) with no explicit typecheck typemap for arg 2 of type 'CompuCell3D::Point3D'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:731: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:758: Warning 472: Overloaded method CompuCell3D::ReactionDiffusionSolverFVM::usePermeableSurface(std::string,std::string,CompuCell3D::Point3D) with no explicit typecheck typemap for arg 3 of type 'CompuCell3D::Point3D'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:758: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:768: Warning 472: Overloaded method CompuCell3D::ReactionDiffusionSolverFVM::usePermeableSurface(std::string,std::string,CompuCell3D::Point3D) with no explicit typecheck typemap for arg 3 of type 'CompuCell3D::Point3D'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:768: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:1343: Warning 472: Overloaded method CompuCell3D::ReactionDiffusionSolverFVM::setFieldFV(unsigned int,CompuCell3D::ReactionDiffusionSolverFV *) with no explicit typecheck typemap for arg 1 of type 'CompuCell3D::Point3D'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:1343: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:1377: Warning 472: Overloaded method CompuCell3D::ReactionDiffusionSolverFVM::pt2ind(CompuCell3D::Point3D const &) with no explicit typecheck typemap for arg 2 of type 'CompuCell3D::Dim3D'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:1377: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:1540: Warning 472: Overloaded method CompuCell3D::ReactionDiffusionSolverFV::ReactionDiffusionSolverFV(CompuCell3D::ReactionDiffusionSolverFVM *,CompuCell3D::Point3D,int) with no explicit typecheck typemap for arg 1 of type 'CompuCell3D::Point3D'.
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:1540: Warning 472: Dispatching calls to this method may not work correctly, see the 'Typemaps and Overloading' section in the Typemaps chapter of the SWIG documentation.
[350/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/Viscosity/CMakeFiles/ViscosityShared.dir/link.d -Wl,-soname,libCC3DViscosity.so.4.9 -o core/CompuCell3D/plugins/Viscosity/libCC3DViscosity.so.4.9.0 core/CompuCell3D/plugins/Viscosity/CMakeFiles/ViscosityShared.dir/ViscosityPlugin.cpp.o core/CompuCell3D/plugins/Viscosity/CMakeFiles/ViscosityShared.dir/ViscosityPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../NeighborTracker:\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/plugins/NeighborTracker/libCC3DNeighborTracker.so.4.9.0  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  -ldl  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[351/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/CMakeFiles/GlobalBoundaryPixelTrackerShared.dir/link.d -Wl,-soname,libCC3DGlobalBoundaryPixelTracker.so.4.9 -o core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/libCC3DGlobalBoundaryPixelTracker.so.4.9.0 core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/CMakeFiles/GlobalBoundaryPixelTrackerShared.dir/GlobalBoundaryPixelTrackerPlugin.cpp.o core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/CMakeFiles/GlobalBoundaryPixelTrackerShared.dir/GlobalBoundaryPixelTrackerPluginProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Automaton:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -lgomp  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
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[354/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/steppables/UniformFieldInitializer/CMakeFiles/UniformFieldInitializerShared.dir/link.d -Wl,-soname,libCC3DUniformFieldInitializer.so.4.9 -o core/CompuCell3D/steppables/UniformFieldInitializer/libCC3DUniformFieldInitializer.so.4.9.0 core/CompuCell3D/steppables/UniformFieldInitializer/CMakeFiles/UniformFieldInitializerShared.dir/UniformFieldInitializer.cpp.o core/CompuCell3D/steppables/UniformFieldInitializer/CMakeFiles/UniformFieldInitializerShared.dir/UniformFieldInitializerProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../Automaton:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
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[358/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/steppables/PolygonFieldInitializer/CMakeFiles/PolygonFieldInitializerShared.dir/link.d -Wl,-soname,libCC3DPolygonFieldInitializer.so.4.9 -o core/CompuCell3D/steppables/PolygonFieldInitializer/libCC3DPolygonFieldInitializer.so.4.9.0 core/CompuCell3D/steppables/PolygonFieldInitializer/CMakeFiles/PolygonFieldInitializerShared.dir/PolygonFieldInitializer.cpp.o core/CompuCell3D/steppables/PolygonFieldInitializer/CMakeFiles/PolygonFieldInitializerShared.dir/PolygonFieldInitializerProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../Automaton:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[359/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/steppables/ObjInitializer/CMakeFiles/ObjInitializerShared.dir/link.d -Wl,-soname,libCC3DObjInitializer.so.4.9 -o core/CompuCell3D/steppables/ObjInitializer/libCC3DObjInitializer.so.4.9.0 core/CompuCell3D/steppables/ObjInitializer/CMakeFiles/ObjInitializerShared.dir/ObjInitializer.cpp.o core/CompuCell3D/steppables/ObjInitializer/CMakeFiles/ObjInitializerShared.dir/ObjInitializerProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../Automaton:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[360/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/steppables/TubeFieldInitializer/CMakeFiles/TubeFieldInitializerShared.dir/link.d -Wl,-soname,libCC3DTubeFieldInitializer.so.4.9 -o core/CompuCell3D/steppables/TubeFieldInitializer/libCC3DTubeFieldInitializer.so.4.9.0 core/CompuCell3D/steppables/TubeFieldInitializer/CMakeFiles/TubeFieldInitializerShared.dir/TubeFieldInitializer.cpp.o core/CompuCell3D/steppables/TubeFieldInitializer/CMakeFiles/TubeFieldInitializerShared.dir/TubeFieldInitializerProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../../:\$ORIGIN/../../Potts3D:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../Automaton:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[361/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/CompuCell3D/steppables/RandomInitializers/CMakeFiles/RandomInitializersShared.dir/link.d -Wl,-soname,libCC3DRandomInitializers.so.4.9 -o core/CompuCell3D/steppables/RandomInitializers/libCC3DRandomInitializers.so.4.9.0 core/CompuCell3D/steppables/RandomInitializers/CMakeFiles/RandomInitializersShared.dir/FieldBuilder.cpp.o core/CompuCell3D/steppables/RandomInitializers/CMakeFiles/RandomInitializersShared.dir/RandomBlobInitializer.cpp.o core/CompuCell3D/steppables/RandomInitializers/CMakeFiles/RandomInitializersShared.dir/RandomFieldInitializer.cpp.o core/CompuCell3D/steppables/RandomInitializers/CMakeFiles/RandomInitializersShared.dir/RandomInitializerProxy.cpp.o  -Wl,-rpath,"\$ORIGIN/../Mitosis:\$ORIGIN/../../plugins/PixelTracker:\$ORIGIN/../../:\$ORIGIN/../../Potts3D:\$ORIGIN/../../Automaton:\$ORIGIN/../../../muParser/ExpressionEvaluator:\$ORIGIN/../../../muParser:\$ORIGIN/../../../XMLUtils:\$ORIGIN/../../../PublicUtilities:\$ORIGIN/../../Boundary:\$ORIGIN/../../Field3D:\$ORIGIN/../../../Logger:"  core/CompuCell3D/steppables/Mitosis/libCC3DMitosisSteppable.so.4.9.0  core/CompuCell3D/plugins/PixelTracker/libCC3DPixelTracker.so.4.9.0  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  -ldl  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[362/395] /usr/bin/g++ -DFMT_SHARED -DSCN_DISABLE_FAST_FLOAT=0 -DSCN_DISABLE_REGEX=0 -DSCN_REGEX_BACKEND=0 -DSerializerDEPy_EXPORTS -DVTK9 -Dkiss_fft_scalar=double -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/usr/include/python3.14 -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/SerializerDE -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface -isystem /usr/include/vtk -isystem /usr/include/vtk/vtkscn/include -isystem /usr/include/vtk/vtkscn -isystem /usr/include/vtk/token -isystem /usr/include/vtk/vtkkissfft -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/pyinterface/SerializerDE/CMakeFiles/SerializerDEPy.dir/CMakeFiles/SerializerDEPy.dir/SerializerDEPyPYTHON_wrap.cxx.o -MF core/pyinterface/SerializerDE/CMakeFiles/SerializerDEPy.dir/CMakeFiles/SerializerDEPy.dir/SerializerDEPyPYTHON_wrap.cxx.o.d -o core/pyinterface/SerializerDE/CMakeFiles/SerializerDEPy.dir/CMakeFiles/SerializerDEPy.dir/SerializerDEPyPYTHON_wrap.cxx.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/SerializerDE/CMakeFiles/SerializerDEPy.dir/SerializerDEPyPYTHON_wrap.cxx
In file included from /usr/include/python3.14/pyconfig.h:6,
                 from /usr/include/python3.14/Python.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/SerializerDE/CMakeFiles/SerializerDEPy.dir/SerializerDEPyPYTHON_wrap.cxx:204:
/usr/include/python3.14/pyconfig-64.h:2007:9: warning: ‘_POSIX_C_SOURCE’ redefined
 2007 | #define _POSIX_C_SOURCE 200809L
      |         ^~~~~~~~~~~~~~~
In file included from /usr/include/c++/16/aarch64-redhat-linux/bits/os_defines.h:39,
                 from /usr/include/c++/16/aarch64-redhat-linux/bits/c++config.h:733,
                 from /usr/include/c++/16/cstdint:40,
                 from <command-line>:
/usr/include/features.h:319:10: note: this is the location of the previous definition
  319 | # define _POSIX_C_SOURCE        202405L
      |          ^~~~~~~~~~~~~~~
/usr/include/python3.14/pyconfig-64.h:2043:9: warning: ‘_XOPEN_SOURCE’ redefined
 2043 | #define _XOPEN_SOURCE 700
      |         ^~~~~~~~~~~~~
/usr/include/features.h:234:10: note: this is the location of the previous definition
  234 | # define _XOPEN_SOURCE  800
      |          ^~~~~~~~~~~~~
[363/395] /usr/bin/g++ -DCC3DXML_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/usr/include/python3.14 -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/CC3DXML -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/XMLUtils -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/pyinterface/CC3DXML/CMakeFiles/CC3DXML.dir/CMakeFiles/CC3DXML.dir/CC3DXMLPYTHON_wrap.cxx.o -MF core/pyinterface/CC3DXML/CMakeFiles/CC3DXML.dir/CMakeFiles/CC3DXML.dir/CC3DXMLPYTHON_wrap.cxx.o.d -o core/pyinterface/CC3DXML/CMakeFiles/CC3DXML.dir/CMakeFiles/CC3DXML.dir/CC3DXMLPYTHON_wrap.cxx.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DXML/CMakeFiles/CC3DXML.dir/CC3DXMLPYTHON_wrap.cxx
In file included from /usr/include/python3.14/pyconfig.h:6,
                 from /usr/include/python3.14/Python.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DXML/CMakeFiles/CC3DXML.dir/CC3DXMLPYTHON_wrap.cxx:203:
/usr/include/python3.14/pyconfig-64.h:2007:9: warning: ‘_POSIX_C_SOURCE’ redefined
 2007 | #define _POSIX_C_SOURCE 200809L
      |         ^~~~~~~~~~~~~~~
In file included from /usr/include/c++/16/aarch64-redhat-linux/bits/os_defines.h:39,
                 from /usr/include/c++/16/aarch64-redhat-linux/bits/c++config.h:733,
                 from /usr/include/c++/16/cstdint:40,
                 from <command-line>:
/usr/include/features.h:319:10: note: this is the location of the previous definition
  319 | # define _POSIX_C_SOURCE        202405L
      |          ^~~~~~~~~~~~~~~
/usr/include/python3.14/pyconfig-64.h:2043:9: warning: ‘_XOPEN_SOURCE’ redefined
 2043 | #define _XOPEN_SOURCE 700
      |         ^~~~~~~~~~~~~
/usr/include/features.h:234:10: note: this is the location of the previous definition
  234 | # define _XOPEN_SOURCE  800
      |          ^~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DXML/CMakeFiles/CC3DXML.dir/CC3DXMLPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_CC3DXMLElement(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DXML/CMakeFiles/CC3DXML.dir/CC3DXMLPYTHON_wrap.cxx:11793:3: warning: deleting object of polymorphic class type ‘CC3DXMLElement’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
11793 |   delete arg1;
      |   ^~~~~~~~~~~
[364/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/CellTypeMonitor/libCC3DCellTypeMonitor.so.4.9.0  core/CompuCell3D/plugins/CellTypeMonitor/libCC3DCellTypeMonitor.so.4.9 core/CompuCell3D/plugins/CellTypeMonitor/libCC3DCellTypeMonitor.so && :
[365/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/Volume/libCC3DVolume.so.4.9.0  core/CompuCell3D/plugins/Volume/libCC3DVolume.so.4.9 core/CompuCell3D/plugins/Volume/libCC3DVolume.so && :
[366/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/Contact/libCC3DContact.so.4.9.0  core/CompuCell3D/plugins/Contact/libCC3DContact.so.4.9 core/CompuCell3D/plugins/Contact/libCC3DContact.so && :
[367/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/Surface/libCC3DSurface.so.4.9.0  core/CompuCell3D/plugins/Surface/libCC3DSurface.so.4.9 core/CompuCell3D/plugins/Surface/libCC3DSurface.so && :
[368/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/ChemotaxisSimple/libCC3DChemotaxisSimple.so.4.9.0  core/CompuCell3D/plugins/ChemotaxisSimple/libCC3DChemotaxisSimple.so.4.9 core/CompuCell3D/plugins/ChemotaxisSimple/libCC3DChemotaxisSimple.so && :
[369/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/ConvergentExtension/libCC3DConvergentExtension.so.4.9.0  core/CompuCell3D/plugins/ConvergentExtension/libCC3DConvergentExtension.so.4.9 core/CompuCell3D/plugins/ConvergentExtension/libCC3DConvergentExtension.so && :
[370/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/PDESolverCaller/libCC3DPDESolverCaller.so.4.9.0  core/CompuCell3D/plugins/PDESolverCaller/libCC3DPDESolverCaller.so.4.9 core/CompuCell3D/plugins/PDESolverCaller/libCC3DPDESolverCaller.so && :
[371/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/Curvature/libCC3DCurvature.so.4.9.0  core/CompuCell3D/plugins/Curvature/libCC3DCurvature.so.4.9 core/CompuCell3D/plugins/Curvature/libCC3DCurvature.so && :
[372/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/ExternalPotential/libCC3DExternalPotential.so.4.9.0  core/CompuCell3D/plugins/ExternalPotential/libCC3DExternalPotential.so.4.9 core/CompuCell3D/plugins/ExternalPotential/libCC3DExternalPotential.so && :
[373/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/Compartment/libCC3DCompartment.so.4.9.0  core/CompuCell3D/plugins/Compartment/libCC3DCompartment.so.4.9 core/CompuCell3D/plugins/Compartment/libCC3DCompartment.so && :
[374/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/ContactInternal/libCC3DContactInternal.so.4.9.0  core/CompuCell3D/plugins/ContactInternal/libCC3DContactInternal.so.4.9 core/CompuCell3D/plugins/ContactInternal/libCC3DContactInternal.so && :
[375/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/Connectivity/libCC3DConnectivity.so.4.9.0  core/CompuCell3D/plugins/Connectivity/libCC3DConnectivity.so.4.9 core/CompuCell3D/plugins/Connectivity/libCC3DConnectivity.so && :
[376/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/OrientedContact/libCC3DOrientedContact.so.4.9.0  core/CompuCell3D/plugins/OrientedContact/libCC3DOrientedContact.so.4.9 core/CompuCell3D/plugins/OrientedContact/libCC3DOrientedContact.so && :
[377/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/libCC3DGlobalBoundaryPixelTracker.so.4.9.0  core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/libCC3DGlobalBoundaryPixelTracker.so.4.9 core/CompuCell3D/plugins/GlobalBoundaryPixelTracker/libCC3DGlobalBoundaryPixelTracker.so && :
[378/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/plugins/Viscosity/libCC3DViscosity.so.4.9.0  core/CompuCell3D/plugins/Viscosity/libCC3DViscosity.so.4.9 core/CompuCell3D/plugins/Viscosity/libCC3DViscosity.so && :
[379/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/steppables/PIFInitializer/libCC3DPIFInitializer.so.4.9.0  core/CompuCell3D/steppables/PIFInitializer/libCC3DPIFInitializer.so.4.9 core/CompuCell3D/steppables/PIFInitializer/libCC3DPIFInitializer.so && :
[380/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/steppables/PIFDumper/libCC3DPIFDumper.so.4.9.0  core/CompuCell3D/steppables/PIFDumper/libCC3DPIFDumper.so.4.9 core/CompuCell3D/steppables/PIFDumper/libCC3DPIFDumper.so && :
[381/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/steppables/BlobFieldInitializer/libCC3DBlobFieldInitializer.so.4.9.0  core/CompuCell3D/steppables/BlobFieldInitializer/libCC3DBlobFieldInitializer.so.4.9 core/CompuCell3D/steppables/BlobFieldInitializer/libCC3DBlobFieldInitializer.so && :
[382/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/steppables/UniformFieldInitializer/libCC3DUniformFieldInitializer.so.4.9.0  core/CompuCell3D/steppables/UniformFieldInitializer/libCC3DUniformFieldInitializer.so.4.9 core/CompuCell3D/steppables/UniformFieldInitializer/libCC3DUniformFieldInitializer.so && :
[383/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/steppables/PolygonFieldInitializer/libCC3DPolygonFieldInitializer.so.4.9.0  core/CompuCell3D/steppables/PolygonFieldInitializer/libCC3DPolygonFieldInitializer.so.4.9 core/CompuCell3D/steppables/PolygonFieldInitializer/libCC3DPolygonFieldInitializer.so && :
[384/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/steppables/TubeFieldInitializer/libCC3DTubeFieldInitializer.so.4.9.0  core/CompuCell3D/steppables/TubeFieldInitializer/libCC3DTubeFieldInitializer.so.4.9 core/CompuCell3D/steppables/TubeFieldInitializer/libCC3DTubeFieldInitializer.so && :
[385/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/steppables/FoamDataOutput/libCC3DFoamDataOutput.so.4.9.0  core/CompuCell3D/steppables/FoamDataOutput/libCC3DFoamDataOutput.so.4.9 core/CompuCell3D/steppables/FoamDataOutput/libCC3DFoamDataOutput.so && :
[386/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/steppables/ObjInitializer/libCC3DObjInitializer.so.4.9.0  core/CompuCell3D/steppables/ObjInitializer/libCC3DObjInitializer.so.4.9 core/CompuCell3D/steppables/ObjInitializer/libCC3DObjInitializer.so && :
[387/395] /usr/bin/cmake -E cmake_symlink_library core/CompuCell3D/steppables/RandomInitializers/libCC3DRandomInitializers.so.4.9.0  core/CompuCell3D/steppables/RandomInitializers/libCC3DRandomInitializers.so.4.9 core/CompuCell3D/steppables/RandomInitializers/libCC3DRandomInitializers.so && :
[388/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/pyinterface/CC3DXML/CMakeFiles/CC3DXML.dir/link.d  -o core/pyinterface/CC3DXML/_CC3DXML.so core/pyinterface/CC3DXML/CMakeFiles/CC3DXML.dir/CMakeFiles/CC3DXML.dir/CC3DXMLPYTHON_wrap.cxx.o  -Wl,-rpath,"\$ORIGIN/../../XMLUtils:\$ORIGIN/../../PublicUtilities:\$ORIGIN/../../CompuCell3D/Boundary:\$ORIGIN/../../CompuCell3D/Field3D:\$ORIGIN/../../Logger:"  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  /usr/lib64/libpython3.14.so  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[389/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/pyinterface/SerializerDE/CMakeFiles/SerializerDEPy.dir/link.d  -o core/pyinterface/SerializerDE/_SerializerDEPy.so core/pyinterface/SerializerDE/CMakeFiles/SerializerDEPy.dir/CMakeFiles/SerializerDEPy.dir/SerializerDEPyPYTHON_wrap.cxx.o  -Wl,-rpath,"\$ORIGIN:\$ORIGIN/../PlayerPythonNew:\$ORIGIN/../../CompuCell3D/plugins/NeighborTracker:\$ORIGIN/../../CompuCell3D/plugins/FocalPointPlasticity:\$ORIGIN/../../CompuCell3D:\$ORIGIN/../../CompuCell3D/Automaton:\$ORIGIN/../../CompuCell3D/Potts3D:\$ORIGIN/../../muParser/ExpressionEvaluator:\$ORIGIN/../../XMLUtils:\$ORIGIN/../../PublicUtilities:\$ORIGIN/../../CompuCell3D/Boundary:\$ORIGIN/../../CompuCell3D/Field3D:\$ORIGIN/../../Logger:\$ORIGIN/../../muParser:"  core/pyinterface/SerializerDE/libSerializerDE.so.4.9.0  core/pyinterface/PlayerPythonNew/libFieldExtractor.so.4.9.0  /usr/lib64/libpython3.14.so  /usr/lib64/libpython3.14.so  core/CompuCell3D/plugins/NeighborTracker/libCC3DNeighborTracker.so.4.9.0  core/CompuCell3D/plugins/FocalPointPlasticity/libCC3DFocalPointPlasticity.so.4.9.0  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a  core/muParser/libCC3DmuParser.so.4.9.0  /usr/lib64/libvtkRenderingVolume.so.1  /usr/lib64/libvtkInteractionStyle.so.1  /usr/lib64/libvtkRenderingCore.so.1  /usr/lib64/libvtkIOLegacy.so.1  /usr/lib64/libvtkIOCellGrid.so.1  /usr/lib64/libvtkIOCore.so.1  /usr/lib64/libvtkFiltersCellGrid.so.1  /usr/lib64/libvtkFiltersCore.so.1  /usr/lib64/libvtkCommonExecutionModel.so.1  /usr/lib64/libvtkCommonDataModel.so.1  /usr/lib64/libvtkCommonTransforms.so.1  /usr/lib64/libvtkCommonMisc.so.1  /usr/lib64/libvtkCommonMath.so.1  /usr/lib64/libvtkCommonCore.so.1  /usr/lib64/libfmt.so.11.2.0  /usr/lib64/libvtkscn.so.1  /usr/lib64/libvtktoken.so.1  /usr/lib64/libvtksys.so.1  -ldl  /usr/lib64/libvtkkissfft.so.1 && :
[390/395] /usr/bin/g++ -DFMT_SHARED -DPlayerPythonNew_EXPORTS -DSCN_DISABLE_FAST_FLOAT=0 -DSCN_DISABLE_REGEX=0 -DSCN_REGEX_BACKEND=0 -DVTK9 -Dkiss_fft_scalar=double -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/usr/include/python3.14 -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -isystem /usr/include/vtk -isystem /usr/include/vtk/vtkscn/include -isystem /usr/include/vtk/vtkscn -isystem /usr/include/vtk/token -isystem /usr/include/vtk/vtkkissfft -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/pyinterface/PlayerPythonNew/CMakeFiles/PlayerPythonNew.dir/CMakeFiles/PlayerPythonNew.dir/PlayerPythonPYTHON_wrap.cxx.o -MF core/pyinterface/PlayerPythonNew/CMakeFiles/PlayerPythonNew.dir/CMakeFiles/PlayerPythonNew.dir/PlayerPythonPYTHON_wrap.cxx.o.d -o core/pyinterface/PlayerPythonNew/CMakeFiles/PlayerPythonNew.dir/CMakeFiles/PlayerPythonNew.dir/PlayerPythonPYTHON_wrap.cxx.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/PlayerPythonNew/CMakeFiles/PlayerPythonNew.dir/PlayerPythonPYTHON_wrap.cxx
In file included from /usr/include/python3.14/pyconfig.h:6,
                 from /usr/include/python3.14/Python.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/PlayerPythonNew/CMakeFiles/PlayerPythonNew.dir/PlayerPythonPYTHON_wrap.cxx:204:
/usr/include/python3.14/pyconfig-64.h:2007:9: warning: ‘_POSIX_C_SOURCE’ redefined
 2007 | #define _POSIX_C_SOURCE 200809L
      |         ^~~~~~~~~~~~~~~
In file included from /usr/include/c++/16/aarch64-redhat-linux/bits/os_defines.h:39,
                 from /usr/include/c++/16/aarch64-redhat-linux/bits/c++config.h:733,
                 from /usr/include/c++/16/cstdint:40,
                 from <command-line>:
/usr/include/features.h:319:10: note: this is the location of the previous definition
  319 | # define _POSIX_C_SOURCE        202405L
      |          ^~~~~~~~~~~~~~~
/usr/include/python3.14/pyconfig-64.h:2043:9: warning: ‘_XOPEN_SOURCE’ redefined
 2043 | #define _XOPEN_SOURCE 700
      |         ^~~~~~~~~~~~~
/usr/include/features.h:234:10: note: this is the location of the previous definition
  234 | # define _XOPEN_SOURCE  800
      |          ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldStorage.h:10,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/PlayerPythonNew/CMakeFiles/PlayerPythonNew.dir/PlayerPythonPYTHON_wrap.cxx:3720:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/PlayerPythonNew/CMakeFiles/PlayerPythonNew.dir/PlayerPythonPYTHON_wrap.cxx: In function ‘void CompuCell3D_VectorFieldCellLevel___setitem__(CompuCell3D::VectorFieldCellLevel*, CompuCell3D::CellG*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/PlayerPythonNew/CMakeFiles/PlayerPythonNew.dir/PlayerPythonPYTHON_wrap.cxx:6837:13: warning: unused variable ‘dim’ [-Wunused-variable]
 6837 |         int dim=PyArray_DIM(pyarray,0);
      |             ^~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/PlayerPythonNew/CMakeFiles/PlayerPythonNew.dir/PlayerPythonPYTHON_wrap.cxx: In function ‘void fillScalarValue(PyObject*, int, int, int, float)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/PlayerPythonNew/CMakeFiles/PlayerPythonNew.dir/PlayerPythonPYTHON_wrap.cxx:6938:13: warning: unused variable ‘dim_x’ [-Wunused-variable]
 6938 |         int dim_x=PyArray_DIM(pyarray,0);
      |             ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/PlayerPythonNew/CMakeFiles/PlayerPythonNew.dir/PlayerPythonPYTHON_wrap.cxx: In function ‘void insertVectorIntoVectorField(PyObject*, int, int, int, float, float, float)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/PlayerPythonNew/CMakeFiles/PlayerPythonNew.dir/PlayerPythonPYTHON_wrap.cxx:6988:13: warning: unused variable ‘dim_x’ [-Wunused-variable]
 6988 |         int dim_x=PyArray_DIM(pyarray,0);
      |             ^~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PlayerPythonNew/FieldStorage.h:12:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::VectorNumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = float]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/PlayerPythonNew/CMakeFiles/PlayerPythonNew.dir/PlayerPythonPYTHON_wrap.cxx:24864:100:   required from here
24864 |         result = (bool)((CompuCell3D::VectorNumpyArrayWrapper3DImpl< float > const *)arg1)->isValid((Point3D const &)*arg2);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:141:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  141 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:142:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  142 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:143:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  143 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::VectorNumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = double]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/PlayerPythonNew/CMakeFiles/PlayerPythonNew.dir/PlayerPythonPYTHON_wrap.cxx:25293:101:   required from here
25293 |         result = (bool)((CompuCell3D::VectorNumpyArrayWrapper3DImpl< double > const *)arg1)->isValid((Point3D const &)*arg2);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:141:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  141 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:142:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  142 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:143:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  143 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:27:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/ndarray_adapter.h: In member function ‘NdarrayAdapter<float, 3>::clear()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/ndarray_adapter.h:151:19: warning: ‘i’ is used uninitialized [-Wuninitialized]
  151 |     for (int i  ; i < arraySize ; ++i){
      |                   ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/ndarray_adapter.h:151:14: note: ‘i’ was declared here
  151 |     for (int i  ; i < arraySize ; ++i){
      |              ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/ndarray_adapter.h: In member function ‘NdarrayAdapter<float, 4>::clear()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/ndarray_adapter.h:151:19: warning: ‘i’ is used uninitialized [-Wuninitialized]
  151 |     for (int i  ; i < arraySize ; ++i){
      |                   ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/ndarray_adapter.h:151:14: note: ‘i’ was declared here
  151 |     for (int i  ; i < arraySize ; ++i){
      |              ^
[391/395] /usr/bin/g++ -DCC3DAuxFields_EXPORTS -DVTK9 -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/usr/include/python3.14 -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/CC3DAuxFields -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx.o -MF core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx.o.d -o core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx
In file included from /usr/include/python3.14/pyconfig.h:6,
                 from /usr/include/python3.14/Python.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:203:
/usr/include/python3.14/pyconfig-64.h:2007:9: warning: ‘_POSIX_C_SOURCE’ redefined
 2007 | #define _POSIX_C_SOURCE 200809L
      |         ^~~~~~~~~~~~~~~
In file included from /usr/include/c++/16/aarch64-redhat-linux/bits/os_defines.h:39,
                 from /usr/include/c++/16/aarch64-redhat-linux/bits/c++config.h:733,
                 from /usr/include/c++/16/cstdint:40,
                 from <command-line>:
/usr/include/features.h:319:10: note: this is the location of the previous definition
  319 | # define _POSIX_C_SOURCE        202405L
      |          ^~~~~~~~~~~~~~~
/usr/include/python3.14/pyconfig-64.h:2043:9: warning: ‘_XOPEN_SOURCE’ redefined
 2043 | #define _XOPEN_SOURCE 700
      |         ^~~~~~~~~~~~~
/usr/include/features.h:234:10: note: this is the location of the previous definition
  234 | # define _XOPEN_SOURCE  800
      |          ^~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx: In function ‘void CompuCell3D_Field3D_Sl_float_Sg__setitem(CompuCell3D::Field3D<float>*, PyObject*, float)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:5802:21: warning: unused variable ‘ok’ [-Wunused-variable]
 5802 |                 int ok = PySlice_GetIndices(xCoord, dim.x, &start_x, &stop_x, &step_x);
      |                     ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:5843:21: warning: unused variable ‘ok’ [-Wunused-variable]
 5843 |                 int ok = PySlice_GetIndices(yCoord, dim.y, &start_y, &stop_y, &step_y);
      |                     ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:5878:16: warning: unused variable ‘ok’ [-Wunused-variable]
 5878 |            int ok = PySlice_GetIndices(zCoord, dim.z, &start_z, &stop_z, &step_z);
      |                ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:5795:42: warning: unused variable ‘sliceLength’ [-Wunused-variable]
 5795 |     Py_ssize_t  start_x, stop_x, step_x, sliceLength;
      |                                          ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:5911:15: warning: unused variable ‘sliceX’ [-Wunused-variable]
 5911 |     PyObject *sliceX=0,*sliceY=0,* sliceZ=0;
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:5911:25: warning: unused variable ‘sliceY’ [-Wunused-variable]
 5911 |     PyObject *sliceX=0,*sliceY=0,* sliceZ=0;
      |                         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:5911:36: warning: unused variable ‘sliceZ’ [-Wunused-variable]
 5911 |     PyObject *sliceX=0,*sliceY=0,* sliceZ=0;
      |                                    ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx: In function ‘void CompuCell3D_Field3D_Sl_double_Sg__setitem(CompuCell3D::Field3D<double>*, PyObject*, double)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:6050:21: warning: unused variable ‘ok’ [-Wunused-variable]
 6050 |                 int ok = PySlice_GetIndices(xCoord, dim.x, &start_x, &stop_x, &step_x);
      |                     ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:6091:21: warning: unused variable ‘ok’ [-Wunused-variable]
 6091 |                 int ok = PySlice_GetIndices(yCoord, dim.y, &start_y, &stop_y, &step_y);
      |                     ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:6126:16: warning: unused variable ‘ok’ [-Wunused-variable]
 6126 |            int ok = PySlice_GetIndices(zCoord, dim.z, &start_z, &stop_z, &step_z);
      |                ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:6043:42: warning: unused variable ‘sliceLength’ [-Wunused-variable]
 6043 |     Py_ssize_t  start_x, stop_x, step_x, sliceLength;
      |                                          ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:6159:15: warning: unused variable ‘sliceX’ [-Wunused-variable]
 6159 |     PyObject *sliceX=0,*sliceY=0,* sliceZ=0;
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:6159:25: warning: unused variable ‘sliceY’ [-Wunused-variable]
 6159 |     PyObject *sliceX=0,*sliceY=0,* sliceZ=0;
      |                         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:6159:36: warning: unused variable ‘sliceZ’ [-Wunused-variable]
 6159 |     PyObject *sliceX=0,*sliceY=0,* sliceZ=0;
      |                                    ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_floatfieldaux(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:11949:3: warning: deleting object of abstract class type ‘CompuCell3D::Field3D<float>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
11949 |   delete arg1;
      |   ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_doublefieldaux(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:12794:3: warning: deleting object of abstract class type ‘CompuCell3D::Field3D<double>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
12794 |   delete arg1;
      |   ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_float_vector_field_3_impl_daux(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:14278:3: warning: deleting object of abstract class type ‘CompuCell3D::VectorField3D<float>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
14278 |   delete arg1;
      |   ^~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:25,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:3664:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:62:20:   required from ‘static CompuCell3D::Field3D<T>* CompuCell3D::Field3D<T>::createInstance(CompuCell3D::Dim3D, const T&) [with T = float]’
   62 |             return new Field3DImpl<T>(dim, initialValue);
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:11172:116:   required from here
11172 |   result = (CompuCell3D::Field3D< float > *)CompuCell3D::Field3D< float >::SWIGTEMPLATEDISAMBIGUATOR createInstance(SWIG_STD_MOVE(arg1),(float const &)*arg2);
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:8:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<double>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:62:20:   required from ‘static CompuCell3D::Field3D<T>* CompuCell3D::Field3D<T>::createInstance(CompuCell3D::Dim3D, const T&) [with T = double]’
   62 |             return new Field3DImpl<T>(dim, initialValue);
      |                    ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:12017:118:   required from here
12017 |   result = (CompuCell3D::Field3D< double > *)CompuCell3D::Field3D< double >::SWIGTEMPLATEDISAMBIGUATOR createInstance(SWIG_STD_MOVE(arg1),(double const &)*arg2);
      |                                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = double]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = double]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = double; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:23570:232:   required from here
23570 |   result = (CompuCell3D::NumpyArrayWrapper3DImpl< double > *)new CompuCell3D::NumpyArrayWrapper3DImpl< double >((std::vector< CompuCell3D::array_size_t,std::allocator< CompuCell3D::array_size_t > > const &)*arg1,SWIG_STD_MOVE(arg2));
      |                                                                                                                                                                                                                                        ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<double>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<double>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = double]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:23916:89:   required from here
23916 |   result = (bool)((CompuCell3D::NumpyArrayWrapper3DImpl< double > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = float; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:23998:230:   required from here
23998 |   result = (CompuCell3D::NumpyArrayWrapper3DImpl< float > *)new CompuCell3D::NumpyArrayWrapper3DImpl< float >((std::vector< CompuCell3D::array_size_t,std::allocator< CompuCell3D::array_size_t > > const &)*arg1,SWIG_STD_MOVE(arg2));
      |                                                                                                                                                                                                                                      ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<float>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<float>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = float]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:24344:88:   required from here
24344 |   result = (bool)((CompuCell3D::NumpyArrayWrapper3DImpl< float > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = char; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:24426:228:   required from here
24426 |   result = (CompuCell3D::NumpyArrayWrapper3DImpl< char > *)new CompuCell3D::NumpyArrayWrapper3DImpl< char >((std::vector< CompuCell3D::array_size_t,std::allocator< CompuCell3D::array_size_t > > const &)*arg1,SWIG_STD_MOVE(arg2));
      |                                                                                                                                                                                                                                    ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<char>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<char>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = char]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:24772:87:   required from here
24772 |   result = (bool)((CompuCell3D::NumpyArrayWrapper3DImpl< char > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = unsigned char; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:24854:246:   required from here
24854 |   result = (CompuCell3D::NumpyArrayWrapper3DImpl< unsigned char > *)new CompuCell3D::NumpyArrayWrapper3DImpl< unsigned char >((std::vector< CompuCell3D::array_size_t,std::allocator< CompuCell3D::array_size_t > > const &)*arg1,SWIG_STD_MOVE(arg2));
      |                                                                                                                                                                                                                                                      ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<unsigned char>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<unsigned char>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = unsigned char]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:25200:96:   required from here
25200 |   result = (bool)((CompuCell3D::NumpyArrayWrapper3DImpl< unsigned char > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = short int; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:25282:230:   required from here
25282 |   result = (CompuCell3D::NumpyArrayWrapper3DImpl< short > *)new CompuCell3D::NumpyArrayWrapper3DImpl< short >((std::vector< CompuCell3D::array_size_t,std::allocator< CompuCell3D::array_size_t > > const &)*arg1,SWIG_STD_MOVE(arg2));
      |                                                                                                                                                                                                                                      ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<short int>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<short int>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = short int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:25628:88:   required from here
25628 |   result = (bool)((CompuCell3D::NumpyArrayWrapper3DImpl< short > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = short unsigned int; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:25710:248:   required from here
25710 |   result = (CompuCell3D::NumpyArrayWrapper3DImpl< unsigned short > *)new CompuCell3D::NumpyArrayWrapper3DImpl< unsigned short >((std::vector< CompuCell3D::array_size_t,std::allocator< CompuCell3D::array_size_t > > const &)*arg1,SWIG_STD_MOVE(arg2));
      |                                                                                                                                                                                                                                                        ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<short unsigned int>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<short unsigned int>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = short unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:26056:97:   required from here
26056 |   result = (bool)((CompuCell3D::NumpyArrayWrapper3DImpl< unsigned short > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = int; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:26138:226:   required from here
26138 |   result = (CompuCell3D::NumpyArrayWrapper3DImpl< int > *)new CompuCell3D::NumpyArrayWrapper3DImpl< int >((std::vector< CompuCell3D::array_size_t,std::allocator< CompuCell3D::array_size_t > > const &)*arg1,SWIG_STD_MOVE(arg2));
      |                                                                                                                                                                                                                                  ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<int>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<int>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:26484:86:   required from here
26484 |   result = (bool)((CompuCell3D::NumpyArrayWrapper3DImpl< int > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = unsigned int; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:26566:244:   required from here
26566 |   result = (CompuCell3D::NumpyArrayWrapper3DImpl< unsigned int > *)new CompuCell3D::NumpyArrayWrapper3DImpl< unsigned int >((std::vector< CompuCell3D::array_size_t,std::allocator< CompuCell3D::array_size_t > > const &)*arg1,SWIG_STD_MOVE(arg2));
      |                                                                                                                                                                                                                                                    ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<unsigned int>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<unsigned int>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:26912:95:   required from here
26912 |   result = (bool)((CompuCell3D::NumpyArrayWrapper3DImpl< unsigned int > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = long int; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:26994:228:   required from here
26994 |   result = (CompuCell3D::NumpyArrayWrapper3DImpl< long > *)new CompuCell3D::NumpyArrayWrapper3DImpl< long >((std::vector< CompuCell3D::array_size_t,std::allocator< CompuCell3D::array_size_t > > const &)*arg1,SWIG_STD_MOVE(arg2));
      |                                                                                                                                                                                                                                    ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<long int>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<long int>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = long int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:27340:87:   required from here
27340 |   result = (bool)((CompuCell3D::NumpyArrayWrapper3DImpl< long > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = long unsigned int; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:27422:246:   required from here
27422 |   result = (CompuCell3D::NumpyArrayWrapper3DImpl< unsigned long > *)new CompuCell3D::NumpyArrayWrapper3DImpl< unsigned long >((std::vector< CompuCell3D::array_size_t,std::allocator< CompuCell3D::array_size_t > > const &)*arg1,SWIG_STD_MOVE(arg2));
      |                                                                                                                                                                                                                                                      ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<long unsigned int>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<long unsigned int>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:27768:96:   required from here
27768 |   result = (bool)((CompuCell3D::NumpyArrayWrapper3DImpl< unsigned long > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:3676:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::VectorNumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = float]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:28117:94:   required from here
28117 |   result = (bool)((CompuCell3D::VectorNumpyArrayWrapper3DImpl< float > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:141:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  141 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:142:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  142 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:143:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  143 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::VectorNumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = double]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:28490:95:   required from here
28490 |   result = (bool)((CompuCell3D::VectorNumpyArrayWrapper3DImpl< double > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:141:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  141 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:142:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  142 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:143:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  143 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx:3670:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/ndarray_adapter.h: In member function ‘NdarrayAdapter<float, 4>::clear()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/ndarray_adapter.h:151:19: warning: ‘i’ is used uninitialized [-Wuninitialized]
  151 |     for (int i  ; i < arraySize ; ++i){
      |                   ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/ndarray_adapter.h:151:14: note: ‘i’ was declared here
  151 |     for (int i  ; i < arraySize ; ++i){
      |              ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/ndarray_adapter.h: In member function ‘NdarrayAdapter<double, 4>::clear()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/ndarray_adapter.h:151:19: warning: ‘i’ is used uninitialized [-Wuninitialized]
  151 |     for (int i  ; i < arraySize ; ++i){
      |                   ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/ndarray_adapter.h:151:14: note: ‘i’ was declared here
  151 |     for (int i  ; i < arraySize ; ++i){
      |              ^
[392/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/link.d  -o core/pyinterface/CC3DAuxFields/_CC3DAuxFields.so core/pyinterface/CC3DAuxFields/CMakeFiles/CC3DAuxFields.dir/CMakeFiles/CC3DAuxFields.dir/CC3DAuxFieldsPYTHON_wrap.cxx.o  -Wl,-rpath,"\$ORIGIN/../../CompuCell3D:\$ORIGIN/../../CompuCell3D/Automaton:\$ORIGIN/../../CompuCell3D/Potts3D:\$ORIGIN/../../muParser/ExpressionEvaluator:\$ORIGIN/../../muParser:\$ORIGIN/../../XMLUtils:\$ORIGIN/../../PublicUtilities:\$ORIGIN/../../CompuCell3D/Boundary:\$ORIGIN/../../CompuCell3D/Field3D:\$ORIGIN/../../Logger:"  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  /usr/lib64/libpython3.14.so  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  -ldl  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a && :
[393/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/pyinterface/PlayerPythonNew/CMakeFiles/PlayerPythonNew.dir/link.d  -o core/pyinterface/PlayerPythonNew/_PlayerPython.so core/pyinterface/PlayerPythonNew/CMakeFiles/PlayerPythonNew.dir/CMakeFiles/PlayerPythonNew.dir/PlayerPythonPYTHON_wrap.cxx.o  -Wl,-rpath,"\$ORIGIN:\$ORIGIN/../../CompuCell3D/plugins/NeighborTracker:\$ORIGIN/../../CompuCell3D/plugins/FocalPointPlasticity:\$ORIGIN/../../CompuCell3D:\$ORIGIN/../../CompuCell3D/Automaton:\$ORIGIN/../../CompuCell3D/Potts3D:\$ORIGIN/../../muParser/ExpressionEvaluator:\$ORIGIN/../../XMLUtils:\$ORIGIN/../../muParser:\$ORIGIN/../../PublicUtilities:\$ORIGIN/../../CompuCell3D/Boundary:\$ORIGIN/../../CompuCell3D/Field3D:\$ORIGIN/../../Logger:"  core/pyinterface/PlayerPythonNew/libFieldExtractor.so.4.9.0  core/CompuCell3D/plugins/NeighborTracker/libCC3DNeighborTracker.so.4.9.0  core/CompuCell3D/plugins/FocalPointPlasticity/libCC3DFocalPointPlasticity.so.4.9.0  /usr/lib64/libpython3.14.so  /usr/lib64/libvtkRenderingVolume.so.1  /usr/lib64/libvtkInteractionStyle.so.1  /usr/lib64/libpython3.14.so  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  -lgomp  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/muParser/libCC3DmuParser.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a  /usr/lib64/libvtkRenderingCore.so.1  /usr/lib64/libvtkIOLegacy.so.1  /usr/lib64/libvtkIOCellGrid.so.1  /usr/lib64/libvtkIOCore.so.1  /usr/lib64/libvtkFiltersCellGrid.so.1  /usr/lib64/libvtkFiltersCore.so.1  /usr/lib64/libvtkCommonExecutionModel.so.1  /usr/lib64/libvtkCommonDataModel.so.1  /usr/lib64/libvtkCommonTransforms.so.1  /usr/lib64/libvtkCommonMisc.so.1  /usr/lib64/libvtkCommonMath.so.1  /usr/lib64/libvtkCommonCore.so.1  /usr/lib64/libfmt.so.11.2.0  /usr/lib64/libvtkscn.so.1  /usr/lib64/libvtktoken.so.1  /usr/lib64/libvtksys.so.1  -ldl  /usr/lib64/libvtkkissfft.so.1 && :
[394/395] /usr/bin/g++ -DCompuCell_EXPORTS -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D -I/usr/include/python3.14 -I/usr/lib64/python3.14/site-packages/numpy/_core/include -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/CompuCellPython -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/pyinterface/PyPlugin -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/muParser -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/Eigen -I/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG -std=gnu++17 -fPIC -fopenmp -MD -MT core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx.o -MF core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx.o.d -o core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx.o -c /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx
In file included from /usr/include/python3.14/pyconfig.h:6,
                 from /usr/include/python3.14/Python.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:205:
/usr/include/python3.14/pyconfig-64.h:2007:9: warning: ‘_POSIX_C_SOURCE’ redefined
 2007 | #define _POSIX_C_SOURCE 200809L
      |         ^~~~~~~~~~~~~~~
In file included from /usr/include/c++/16/aarch64-redhat-linux/bits/os_defines.h:39,
                 from /usr/include/c++/16/aarch64-redhat-linux/bits/c++config.h:733,
                 from /usr/include/c++/16/cstdint:40,
                 from <command-line>:
/usr/include/features.h:319:10: note: this is the location of the previous definition
  319 | # define _POSIX_C_SOURCE        202405L
      |          ^~~~~~~~~~~~~~~
/usr/include/python3.14/pyconfig-64.h:2043:9: warning: ‘_XOPEN_SOURCE’ redefined
 2043 | #define _XOPEN_SOURCE 700
      |         ^~~~~~~~~~~~~
/usr/include/features.h:234:10: note: this is the location of the previous definition
  234 | # define _XOPEN_SOURCE  800
      |          ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:9,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:7,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Automaton/CC3D_Automaton.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/VolumeTracker/VolumeTrackerPlugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:4544:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:117:55:   required from here
  117 |     class Array3DLinearFortranField3DAdapter : public Field3DImpl<float> {
      |                                                       ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:142:22: note:   by ‘virtual void CompuCell3D::Array3DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  142 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:290:22: note:   by ‘virtual void CompuCell3D::Array2DLinearFortranField3DAdapter::setDim(CompuCell3D::Dim3D)’
  290 |         virtual void setDim(const Dim3D newDim) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Cell.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In member function ‘void CompuCell3D::ExtraMembersGroup::destroy()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:51:17: warning: deleting ‘__gnu_cxx::__alloc_traits<std::allocator<void*>, void*>::value_type’ {aka ‘void*’} is undefined [-Wdelete-incomplete]
   51 |                 delete (members[i]);
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h: In destructor ‘CompuCell3D::ExtraMembersGroupFactory::~ExtraMembersGroupFactory()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ExtraMembers.h:95:17: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersFactory<void>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
   95 |                 delete factories[i];
      |                 ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<CompuCell3D::CellG*>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/WatchableField3D.h:18:11:   required from ‘class CompuCell3D::WatchableField3D<CompuCell3D::CellG*>’
   18 |     class WatchableField3D : public Field3DImpl<T> {
      |           ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Potts3D/Potts3D.h:465:81:   required from here
  465 |         virtual Field3D<CellG *> *getCellFieldG() { return (Field3D<CellG *> *) cellFieldG; }
      |                                                                                 ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = CompuCell3D::CellG*]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/CC3D_PublicUtilities.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:10:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/PublicUtilities/StringUtils.h:23:40: warning: ‘template<class _Arg, class _Result> struct std::unary_function’ is deprecated [-Wdeprecated-declarations]
   23 | class isWhiteSpaceFunctor: public std::unary_function<char,bool>{
      |                                        ^~~~~~~~~~~~~~
In file included from /usr/include/c++/16/bits/predefined_ops.h:33,
                 from /usr/include/c++/16/bits/stl_algobase.h:70,
                 from /usr/include/c++/16/bits/specfun.h:44,
                 from /usr/include/c++/16/cmath:3913,
                 from /usr/include/c++/16/math.h:36,
                 from /usr/include/python3.14/Python.h:23:
/usr/include/c++/16/bits/stl_function.h:120:12: note: declared here
  120 |     struct unary_function
      |            ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:14,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h: In constructor ‘CompuCell3D::ParserStorage::ParserStorage()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:26:25: warning: ‘CompuCell3D::ParserStorage::updatePottsCC3DXMLElement’ will be initialized after [-Wreorder]
   26 |         CC3DXMLElement *updatePottsCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:22:25: warning:   ‘CC3DXMLElement* CompuCell3D::ParserStorage::metadataCC3DXMLElement’ [-Wreorder]
   22 |         CC3DXMLElement *metadataCC3DXMLElement;
      |                         ^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/ParserStorage.h:16:9: warning:   when initialized here [-Wreorder]
   16 |         ParserStorage() : pottsCC3DXMLElement(0), updatePottsCC3DXMLElement(0), metadataCC3DXMLElement(0),
      |         ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:17:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGenerator::RandomNumberGenerator()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:28:22: warning: ‘CompuCell3D::RandomNumberGenerator::seed’ will be initialized after [-Wreorder]
   28 |         unsigned int seed;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:24:22: warning:   ‘unsigned int CompuCell3D::RandomNumberGenerator::bits’ [-Wreorder]
   24 |         unsigned int bits;
      |                      ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         RandomNumberGenerator() : seed(1), bits(0) {};
      |         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h: In constructor ‘CompuCell3D::RandomNumberGeneratorFactory::RandomNumberGeneratorFactory(Type)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:101:14: warning: ‘CompuCell3D::RandomNumberGeneratorFactory::type’ will be initialized after [-Wreorder]
  101 |         Type type;
      |              ^~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:89:32: warning:   ‘CompuCell3D::RandomNumberGenerator* CompuCell3D::RandomNumberGeneratorFactory::singleton’ [-Wreorder]
   89 |         RandomNumberGenerator* singleton;
      |                                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/RandomNumberGenerators.h:105:9: warning:   when initialized here [-Wreorder]
  105 |         RandomNumberGeneratorFactory(Type _type = DEFAULT) : type(_type), singleton(0) {
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Plugin.h:6,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:4542:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h: At global scope:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/SimObject.h:29:22: warning: ‘virtual void CompuCell3D::SimObject::extraInit(CompuCell3D::Simulator*)’ was hidden [-Woverloaded-virtual=]
   29 |         virtual void extraInit(Simulator *simulator) { this->simulator = simulator; }
      |                      ^~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/CC3D_Main.h:18:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Simulator.h:308:22: note:   by ‘virtual void CompuCell3D::Simulator::extraInit()’
  308 |         virtual void extraInit() ;///initialize plugins after all steppables have been initialized
      |                      ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DBordersField3DAdapter<float>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:150:26:   required from here
  150 |         class PDESOLVERS_EXPORT ReactionDiffusionSolverFVM :public DiffusableVector<float>
      |                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: warning: ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = float]’ was hidden [-Woverloaded-virtual=]
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:515:18: note:   by ‘void CompuCell3D::Array3DBordersField3DAdapter<T>::setDim(CompuCell3D::Dim3D) [with T = float]’
  515 |     virtual void setDim(const Dim3D theDim) {
      |                  ^~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:4565:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h: In member function ‘bool CompuCell3D::ReactionDiffusionSolverFVM::isValid(CompuCell3D::Point3D)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h:1164:84: warning: catching polymorphic type ‘class CompuCell3D::CC3DException’ by value [-Wcatch-value=]
 1164 |                 bool isValid(Point3D pt) { try { pt2ind(pt); return true; } catch (CC3DException) { return false; } }
      |                                                                                    ^~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:5171:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h: In constructor ‘CompuCell3D::LengthEnergyParam::LengthEnergyParam()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h:28:15: warning: ‘CompuCell3D::LengthEnergyParam::lambdaLength’ will be initialized after [-Wreorder]
   28 |         float lambdaLength;
      |               ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h:27:16: warning:   ‘double CompuCell3D::LengthEnergyParam::minorTargetLength’ [-Wreorder]
   27 |         double minorTargetLength;
      |                ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h:21:9: warning:   when initialized here [-Wreorder]
   21 |         LengthEnergyParam() : targetLength(0), lambdaLength(0.0), minorTargetLength(0.0) {}
      |         ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h: In constructor ‘CompuCell3D::LengthEnergyParam::LengthEnergyParam(std::string, double, double)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h:29:21: warning: ‘CompuCell3D::LengthEnergyParam::cellTypeName’ will be initialized after [-Wreorder]
   29 |         std::string cellTypeName;
      |                     ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h:26:16: warning:   ‘double CompuCell3D::LengthEnergyParam::targetLength’ [-Wreorder]
   26 |         double targetLength;
      |                ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h:23:9: warning:   when initialized here [-Wreorder]
   23 |         LengthEnergyParam(std::string _cellTypeName, double _targetLength, double _lambdaLength) :
      |         ^~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:5176:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h: In constructor ‘CompuCell3D::ChemotaxisData::ChemotaxisData(float, float, std::string)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:39:21: warning: ‘CompuCell3D::ChemotaxisData::typeName’ will be initialized after [-Wreorder]
   39 |         std::string typeName;
      |                     ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:34:41: warning:   ‘float (CompuCell3D::ChemotaxisPlugin::* CompuCell3D::ChemotaxisData::formulaPtr)(float, float, CompuCell3D::ChemotaxisData&)’ [-Wreorder]
   34 |         chemotaxisEnergyFormulaFcnPtr_t formulaPtr;
      |                                         ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:15:9: warning:   when initialized here [-Wreorder]
   15 |         ChemotaxisData(float _lambda = 0.0, float _saturationCoef = 0.0, std::string _typeName = "") :
      |         ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:34:41: warning: ‘CompuCell3D::ChemotaxisData::formulaPtr’ will be initialized after [-Wreorder]
   34 |         chemotaxisEnergyFormulaFcnPtr_t formulaPtr;
      |                                         ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:30:21: warning:   ‘std::string CompuCell3D::ChemotaxisData::formulaName’ [-Wreorder]
   30 |         std::string formulaName;
      |                     ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:15:9: warning:   when initialized here [-Wreorder]
   15 |         ChemotaxisData(float _lambda = 0.0, float _saturationCoef = 0.0, std::string _typeName = "") :
      |         ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:42:20: warning: ‘CompuCell3D::ChemotaxisData::automaton’ will be initialized after [-Wreorder]
   42 |         Automaton *automaton;
      |                    ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:37:14: warning:   ‘bool CompuCell3D::ChemotaxisData::allowChemotaxisBetweenCompartmentsGlobal’ [-Wreorder]
   37 |         bool allowChemotaxisBetweenCompartmentsGlobal;
      |              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:15:9: warning:   when initialized here [-Wreorder]
   15 |         ChemotaxisData(float _lambda = 0.0, float _saturationCoef = 0.0, std::string _typeName = "") :
      |         ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:37:14: warning: ‘CompuCell3D::ChemotaxisData::allowChemotaxisBetweenCompartmentsGlobal’ will be initialized after [-Wreorder]
   37 |         bool allowChemotaxisBetweenCompartmentsGlobal;
      |              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:29:15: warning:   ‘float CompuCell3D::ChemotaxisData::concCOM’ [-Wreorder]
   29 |         float concCOM;  // Storage for pre-calculated concentration at the COM of a cell
      |               ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:15:9: warning:   when initialized here [-Wreorder]
   15 |         ChemotaxisData(float _lambda = 0.0, float _saturationCoef = 0.0, std::string _typeName = "") :
      |         ^~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h: In member function ‘void CompuCell3D::ChemotaxisData::initializeChemotactTowardsVectorTypes(std::string)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:73:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   73 |             for (int idx = 0; idx < vecTypeNamesTmp.size(); ++idx) {
      |                               ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h: In member function ‘void CompuCell3D::ChemotaxisData::assignChemotactTowardsVectorTypes(std::vector<int>)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:82:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   82 |             for (int idx = 0; idx < _chemotactTowardsTypesVec.size(); ++idx) {
      |                               ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h: In member function ‘std::vector<int> CompuCell3D::ChemotaxisData::getChemotactTowardsVectorTypes()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:90:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<unsigned char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   90 |             for (int idx = 0; idx < chemotactTowardsTypesVec.size(); ++idx) {
      |                               ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h: In member function ‘void CompuCell3D::ChemotaxisData::outScr()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:118:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<unsigned char>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  118 |             for (int i = 0; i < chemotactTowardsTypesVec.size(); ++i) {
      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h: In member function ‘CompuCell3D::ChemotaxisData* CompuCell3D::ChemotaxisFieldData::getChemotaxisData(int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h:171:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::ChemotaxisData>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  171 |             if (_index < 0 || _index > vecChemotaxisData.size() - 1)
      |                               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:5204:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadData.h: In member function ‘CompuCell3D::CadherinData* CompuCell3D::ContactMultiCadSpecificityCadherin::getSpecificity(std::string, std::string)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadData.h:74:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<CompuCell3D::CadherinData>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   74 |             for (int i = 0; i < specificityCadherinTuppleVec.size(); ++i) {
      |                             ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:5225:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h: In constructor ‘CompuCell3D::FocalPointPlasticityTrackerData::FocalPointPlasticityTrackerData(CompuCell3D::CellG*, float, float, float, int, float, int, bool, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:81:13: warning: ‘CompuCell3D::FocalPointPlasticityTrackerData::anchorId’ will be initialized after [-Wreorder]
   81 |         int anchorId;
      |             ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:78:14: warning:   ‘bool CompuCell3D::FocalPointPlasticityTrackerData::isInitiator’ [-Wreorder]
   78 |         bool isInitiator;
      |              ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:23:9: warning:   when initialized here [-Wreorder]
   23 |         FocalPointPlasticityTrackerData(CellG *_neighborAddress = 0, float _lambdaDistance = 0.0,
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h: In constructor ‘CompuCell3D::FocalPointPlasticityLinkTrackerData::FocalPointPlasticityLinkTrackerData(float, float, float, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:158:13: warning: ‘CompuCell3D::FocalPointPlasticityLinkTrackerData::anchorId’ will be initialized after [-Wreorder]
  158 |         int anchorId;
      |             ^~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:156:13: warning:   ‘int CompuCell3D::FocalPointPlasticityLinkTrackerData::initMCS’ [-Wreorder]
  156 |         int initMCS;
      |             ^~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h:115:9: warning:   when initialized here [-Wreorder]
  115 |         FocalPointPlasticityLinkTrackerData(float _lambdaDistance = 0.0, float _targetDistance = 0.0,
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h:8,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventory.h:4,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.h:5,
                 from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:5226:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h: In constructor ‘CompuCell3D::FocalPointPlasticityLinkBase::FocalPointPlasticityLinkBase()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:50:16: warning: ‘CompuCell3D::FocalPointPlasticityLinkBase::initiated’ will be initialized after [-Wreorder]
   50 |         CellG *initiated;
      |                ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:47:18: warning:   ‘CompuCell3D::Potts3D* CompuCell3D::FocalPointPlasticityLinkBase::potts’ [-Wreorder]
   47 |         Potts3D *potts;
      |                  ^~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h:61:9: warning:   when initialized here [-Wreorder]
   61 |         FocalPointPlasticityLinkBase() :
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:5230:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/FieldSecretor.h: In constructor ‘CompuCell3D::FieldSecretorResult::FieldSecretorResult(float, bool)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/FieldSecretor.h:38:15: warning: ‘CompuCell3D::FieldSecretorResult::tot_amount’ will be initialized after [-Wreorder]
   38 |         float tot_amount;
      |               ^~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/FieldSecretor.h:37:14: warning:   ‘bool CompuCell3D::FieldSecretorResult::success_flag’ [-Wreorder]
   37 |         bool success_flag;
      |              ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/Secretion/FieldSecretor.h:32:9: warning:   when initialized here [-Wreorder]
   32 |         FieldSecretorResult(float tot_amount = 0.0, bool success_flag = true) :
      |         ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘void CompuCell3D_Field3D_Sl_float_Sg__setitem(CompuCell3D::Field3D<float>*, PyObject*, float)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:5896:21: warning: unused variable ‘ok’ [-Wunused-variable]
 5896 |                 int ok = PySlice_GetIndices(xCoord, dim.x, &start_x, &stop_x, &step_x);
      |                     ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:5937:21: warning: unused variable ‘ok’ [-Wunused-variable]
 5937 |                 int ok = PySlice_GetIndices(yCoord, dim.y, &start_y, &stop_y, &step_y);
      |                     ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:5972:16: warning: unused variable ‘ok’ [-Wunused-variable]
 5972 |            int ok = PySlice_GetIndices(zCoord, dim.z, &start_z, &stop_z, &step_z);
      |                ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:5889:42: warning: unused variable ‘sliceLength’ [-Wunused-variable]
 5889 |     Py_ssize_t  start_x, stop_x, step_x, sliceLength;
      |                                          ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:6005:15: warning: unused variable ‘sliceX’ [-Wunused-variable]
 6005 |     PyObject *sliceX=0,*sliceY=0,* sliceZ=0;
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:6005:25: warning: unused variable ‘sliceY’ [-Wunused-variable]
 6005 |     PyObject *sliceX=0,*sliceY=0,* sliceZ=0;
      |                         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:6005:36: warning: unused variable ‘sliceZ’ [-Wunused-variable]
 6005 |     PyObject *sliceX=0,*sliceY=0,* sliceZ=0;
      |                                    ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘void CompuCell3D_Field3D_Sl_int_Sg__setitem(CompuCell3D::Field3D<int>*, PyObject*, int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:6144:21: warning: unused variable ‘ok’ [-Wunused-variable]
 6144 |                 int ok = PySlice_GetIndices(xCoord, dim.x, &start_x, &stop_x, &step_x);
      |                     ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:6185:21: warning: unused variable ‘ok’ [-Wunused-variable]
 6185 |                 int ok = PySlice_GetIndices(yCoord, dim.y, &start_y, &stop_y, &step_y);
      |                     ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:6220:16: warning: unused variable ‘ok’ [-Wunused-variable]
 6220 |            int ok = PySlice_GetIndices(zCoord, dim.z, &start_z, &stop_z, &step_z);
      |                ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:6137:42: warning: unused variable ‘sliceLength’ [-Wunused-variable]
 6137 |     Py_ssize_t  start_x, stop_x, step_x, sliceLength;
      |                                          ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:6253:15: warning: unused variable ‘sliceX’ [-Wunused-variable]
 6253 |     PyObject *sliceX=0,*sliceY=0,* sliceZ=0;
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:6253:25: warning: unused variable ‘sliceY’ [-Wunused-variable]
 6253 |     PyObject *sliceX=0,*sliceY=0,* sliceZ=0;
      |                         ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:6253:36: warning: unused variable ‘sliceZ’ [-Wunused-variable]
 6253 |     PyObject *sliceX=0,*sliceY=0,* sliceZ=0;
      |                                    ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘void CompuCell3D_Field3D_Sl_CompuCell3D_CellG_Sm__Sg__setitem(CompuCell3D::Field3D<CompuCell3D::CellG*>*, PyObject*, CompuCell3D::CellG*, void*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:6395:17: warning: unused variable ‘ok’ [-Wunused-variable]
 6395 |             int ok = PySlice_GetIndices(xCoord, dim.x, &start_x, &stop_x, &step_x);
      |                 ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:6426:17: warning: unused variable ‘ok’ [-Wunused-variable]
 6426 |             int ok = PySlice_GetIndices(yCoord, dim.y, &start_y, &stop_y, &step_y);
      |                 ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:6458:17: warning: unused variable ‘ok’ [-Wunused-variable]
 6458 |             int ok = PySlice_GetIndices(zCoord, dim.z, &start_z, &stop_z, &step_z);
      |                 ^~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:6387:46: warning: unused variable ‘sliceLength’ [-Wunused-variable]
 6387 |         Py_ssize_t  start_x, stop_x, step_x, sliceLength;
      |                                              ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:6489:19: warning: unused variable ‘sliceX’ [-Wunused-variable]
 6489 |         PyObject *sliceX=0,*sliceY=0,* sliceZ=0;
      |                   ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:6489:29: warning: unused variable ‘sliceY’ [-Wunused-variable]
 6489 |         PyObject *sliceX=0,*sliceY=0,* sliceZ=0;
      |                             ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:6489:40: warning: unused variable ‘sliceZ’ [-Wunused-variable]
 6489 |         PyObject *sliceX=0,*sliceY=0,* sliceZ=0;
      |                                        ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In destructor ‘virtual CellInventoryWatcherDir::~CellInventoryWatcherDir()’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:9571:13: warning: deleting object of polymorphic class type ‘CellInventoryWatcherForwarder’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
 9571 |             delete forwarder;
      |             ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_floatfield(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:39401:9: warning: deleting object of abstract class type ‘CompuCell3D::Field3D<float>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
39401 |         delete arg1;
      |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_intfield(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:42076:9: warning: deleting object of abstract class type ‘CompuCell3D::Field3D<int>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
42076 |         delete arg1;
      |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<int>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:42176:127:   required from here
42176 |         result = (CompuCell3D::Field3DImpl< int > *)new CompuCell3D::Field3DImpl< int >(SWIG_STD_MOVE(arg1),(int const &)*arg2);
      |                                                                                                                               ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = int]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = int]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_cellfield(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:44702:9: warning: deleting object of abstract class type ‘CompuCell3D::Field3D<CompuCell3D::CellG*>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
44702 |         delete arg1;
      |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_cellgchangewatcher(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:64320:9: warning: deleting object of abstract class type ‘CompuCell3D::Field3DChangeWatcher<CompuCell3D::CellG*>’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
64320 |         delete arg1;
      |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_CellGChangeWatcher(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:73325:9: warning: deleting object of abstract class type ‘CompuCell3D::CellGChangeWatcher’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
73325 |         delete arg1;
      |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_CellInventoryWatcher(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:74396:9: warning: deleting object of polymorphic class type ‘CompuCell3D::CellInventoryWatcher’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
74396 |         delete arg1;
      |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_ExtraMembersGroupAccessorBase(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:116531:9: warning: deleting object of abstract class type ‘CompuCell3D::ExtraMembersGroupAccessorBase’ which has non-virtual destructor will cause undefined behavior [-Wdelete-non-virtual-dtor]
116531 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_connectivitylocalflexaccessor(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:117176:9: warning: deleting object of polymorphic class type ‘CompuCell3D::ExtraMembersGroupAccessor<CompuCell3D::ConnectivityLocalFlexData>’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
117176 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_connectivityGlobalaccessor(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:118128:9: warning: deleting object of polymorphic class type ‘CompuCell3D::ExtraMembersGroupAccessor<CompuCell3D::ConnectivityGlobalData>’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
118128 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_lengthconstraintccessor(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:119753:9: warning: deleting object of polymorphic class type ‘CompuCell3D::ExtraMembersGroupAccessor<CompuCell3D::LengthConstraintData>’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
119753 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_neighbortrackeraccessor(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:130191:9: warning: deleting object of polymorphic class type ‘CompuCell3D::ExtraMembersGroupAccessor<CompuCell3D::NeighborTracker>’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
130191 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_PixelTrackerAccessor(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:133941:9: warning: deleting object of polymorphic class type ‘CompuCell3D::ExtraMembersGroupAccessor<CompuCell3D::PixelTracker>’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
133941 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_BoundaryPixelTrackerAccessor(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:138290:9: warning: deleting object of polymorphic class type ‘CompuCell3D::ExtraMembersGroupAccessor<CompuCell3D::BoundaryPixelTracker>’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
138290 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_contactlocalflexcontainerccessor(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:144384:9: warning: deleting object of polymorphic class type ‘CompuCell3D::ExtraMembersGroupAccessor<CompuCell3D::ContactLocalFlexDataContainer>’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
144384 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_contactproductflexccessor(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:148156:9: warning: deleting object of polymorphic class type ‘CompuCell3D::ExtraMembersGroupAccessor<CompuCell3D::ContactLocalProductData>’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
148156 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_contactmulticaddataaccessor(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:154760:9: warning: deleting object of polymorphic class type ‘CompuCell3D::ExtraMembersGroupAccessor<CompuCell3D::ContactMultiCadData>’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
154760 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_adhesionflexdataaccessor(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:156243:9: warning: deleting object of polymorphic class type ‘CompuCell3D::ExtraMembersGroupAccessor<CompuCell3D::AdhesionFlexData>’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
156243 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_cellOrientationVectorAccessor(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:158608:9: warning: deleting object of polymorphic class type ‘CompuCell3D::ExtraMembersGroupAccessor<CompuCell3D::CellOrientationVector>’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
158608 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_LambdaCellOrientationAccessor(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:158756:9: warning: deleting object of polymorphic class type ‘CompuCell3D::ExtraMembersGroupAccessor<CompuCell3D::LambdaCellOrientation>’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
158756 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_polarizationVectorAccessor(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:160456:9: warning: deleting object of polymorphic class type ‘CompuCell3D::ExtraMembersGroupAccessor<CompuCell3D::PolarizationVector>’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
160456 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_elasticityTrackerAccessor(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:161630:9: warning: deleting object of polymorphic class type ‘CompuCell3D::ExtraMembersGroupAccessor<CompuCell3D::ElasticityTracker>’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
161630 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_plasticityTrackerAccessor(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:165603:9: warning: deleting object of polymorphic class type ‘CompuCell3D::ExtraMembersGroupAccessor<CompuCell3D::PlasticityTracker>’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
165603 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_focalPointPlasticityTrackerAccessor(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:170536:9: warning: deleting object of polymorphic class type ‘CompuCell3D::ExtraMembersGroupAccessor<CompuCell3D::FocalPointPlasticityTracker>’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
170536 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_FocalPointPlasticityLinkBase(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:176016:9: warning: deleting object of polymorphic class type ‘CompuCell3D::FocalPointPlasticityLinkBase’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
176016 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_FocalPointPlasticityLink(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:178400:9: warning: deleting object of polymorphic class type ‘CompuCell3D::FocalPointPlasticityLink’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
178400 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_FocalPointPlasticityInternalLink(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:179084:9: warning: deleting object of polymorphic class type ‘CompuCell3D::FocalPointPlasticityInternalLink’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
179084 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_FocalPointPlasticityAnchor(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:179850:9: warning: deleting object of polymorphic class type ‘CompuCell3D::FocalPointPlasticityAnchor’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
179850 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_OrientedGrowthDataAccessorTemplate(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:213957:9: warning: deleting object of polymorphic class type ‘CompuCell3D::ExtraMembersGroupAccessor<CompuCell3D::OrientedGrowthData>’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
213957 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_OrientedGrowth2DataAccessorTemplate(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:216240:9: warning: deleting object of polymorphic class type ‘CompuCell3D::ExtraMembersGroupAccessor<CompuCell3D::OrientedGrowth2Data>’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
216240 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_ContactOrientationDataAccessorTemplate(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:218700:9: warning: deleting object of polymorphic class type ‘CompuCell3D::ExtraMembersGroupAccessor<CompuCell3D::ContactOrientationData>’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
218700 |         delete arg1;
       |         ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h: In instantiation of ‘class CompuCell3D::Field3DImpl<unsigned char>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:952:11:   required from ‘class CompuCell3D::Array3DCUDA<unsigned char>’
  952 |     class Array3DCUDA : public Field3DImpl<T> {
      |           ^~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:219773:109:   required from here
219773 |         result = (CompuCell3D::Array3DCUDA< unsigned char > *)new CompuCell3D::Array3DCUDA< unsigned char >();
       |                                                                                                             ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3D.h:132:22: warning: ‘void CompuCell3D::Field3D<T>::setDim(CompuCell3D::Dim3D) [with T = unsigned char]’ was hidden [-Woverloaded-virtual=]
  132 |         virtual void setDim(const Dim3D theDim) {}
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:93:22: note:   by ‘void CompuCell3D::Field3DImpl<T>::setDim(CompuCell3D::Dim3D, CompuCell3D::Dim3D) [with T = unsigned char]’
   93 |         virtual void setDim(const Dim3D theDim, Dim3D shiftVec = Dim3D()) {
      |                      ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h: In instantiation of ‘class CompuCell3D::Array3DCUDA<unsigned char>’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:219773:109:   required from here
219773 |         result = (CompuCell3D::Array3DCUDA< unsigned char > *)new CompuCell3D::Array3DCUDA< unsigned char >();
       |                                                                                                             ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Field3DImpl.h:125:23: warning: ‘CompuCell3D::Dim3D CompuCell3D::Field3DImpl<T>::getDim() const [with T = unsigned char]’ was hidden [-Woverloaded-virtual=]
  125 |         virtual Dim3D getDim() const { return dim; }
      |                       ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/Array3D.h:1029:15: note:   by ‘CompuCell3D::Dim3D CompuCell3D::Array3DCUDA<T>::getDim() [with T = unsigned char]’
 1029 |         Dim3D getDim() { return Field3DImpl<T>::dim; }
      |               ^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_delete_Polarization23DataAccessorTemplate(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:222384:9: warning: deleting object of polymorphic class type ‘CompuCell3D::ExtraMembersGroupAccessor<CompuCell3D::Polarization23Data>’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
222384 |         delete arg1;
       |         ^~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:14:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = double; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:25506:238:   required from here
25506 |         result = (CompuCell3D::NumpyArrayWrapper3DImpl< double > *)new CompuCell3D::NumpyArrayWrapper3DImpl< double >((std::vector< CompuCell3D::array_size_t,std::allocator< CompuCell3D::array_size_t > > const &)*arg1,SWIG_STD_MOVE(arg2));
      |                                                                                                                                                                                                                                              ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<double>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<double>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = double]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:26203:95:   required from here
26203 |         result = (bool)((CompuCell3D::NumpyArrayWrapper3DImpl< double > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = float; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:26320:236:   required from here
26320 |         result = (CompuCell3D::NumpyArrayWrapper3DImpl< float > *)new CompuCell3D::NumpyArrayWrapper3DImpl< float >((std::vector< CompuCell3D::array_size_t,std::allocator< CompuCell3D::array_size_t > > const &)*arg1,SWIG_STD_MOVE(arg2));
      |                                                                                                                                                                                                                                            ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<float>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<float>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = float]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:27017:94:   required from here
27017 |         result = (bool)((CompuCell3D::NumpyArrayWrapper3DImpl< float > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = char; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:27134:234:   required from here
27134 |         result = (CompuCell3D::NumpyArrayWrapper3DImpl< char > *)new CompuCell3D::NumpyArrayWrapper3DImpl< char >((std::vector< CompuCell3D::array_size_t,std::allocator< CompuCell3D::array_size_t > > const &)*arg1,SWIG_STD_MOVE(arg2));
      |                                                                                                                                                                                                                                          ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<char>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<char>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = char]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:27831:93:   required from here
27831 |         result = (bool)((CompuCell3D::NumpyArrayWrapper3DImpl< char > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = unsigned char; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:27948:252:   required from here
27948 |         result = (CompuCell3D::NumpyArrayWrapper3DImpl< unsigned char > *)new CompuCell3D::NumpyArrayWrapper3DImpl< unsigned char >((std::vector< CompuCell3D::array_size_t,std::allocator< CompuCell3D::array_size_t > > const &)*arg1,SWIG_STD_MOVE(arg2));
      |                                                                                                                                                                                                                                                            ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<unsigned char>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<unsigned char>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = unsigned char]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:28645:102:   required from here
28645 |         result = (bool)((CompuCell3D::NumpyArrayWrapper3DImpl< unsigned char > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = short int; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:28762:236:   required from here
28762 |         result = (CompuCell3D::NumpyArrayWrapper3DImpl< short > *)new CompuCell3D::NumpyArrayWrapper3DImpl< short >((std::vector< CompuCell3D::array_size_t,std::allocator< CompuCell3D::array_size_t > > const &)*arg1,SWIG_STD_MOVE(arg2));
      |                                                                                                                                                                                                                                            ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<short int>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<short int>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = short int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:29459:94:   required from here
29459 |         result = (bool)((CompuCell3D::NumpyArrayWrapper3DImpl< short > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = short unsigned int; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:29576:254:   required from here
29576 |         result = (CompuCell3D::NumpyArrayWrapper3DImpl< unsigned short > *)new CompuCell3D::NumpyArrayWrapper3DImpl< unsigned short >((std::vector< CompuCell3D::array_size_t,std::allocator< CompuCell3D::array_size_t > > const &)*arg1,SWIG_STD_MOVE(arg2));
      |                                                                                                                                                                                                                                                              ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<short unsigned int>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<short unsigned int>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = short unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:30273:103:   required from here
30273 |         result = (bool)((CompuCell3D::NumpyArrayWrapper3DImpl< unsigned short > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = int; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:30390:232:   required from here
30390 |         result = (CompuCell3D::NumpyArrayWrapper3DImpl< int > *)new CompuCell3D::NumpyArrayWrapper3DImpl< int >((std::vector< CompuCell3D::array_size_t,std::allocator< CompuCell3D::array_size_t > > const &)*arg1,SWIG_STD_MOVE(arg2));
      |                                                                                                                                                                                                                                        ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<int>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<int>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:31087:92:   required from here
31087 |         result = (bool)((CompuCell3D::NumpyArrayWrapper3DImpl< int > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = unsigned int; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:31204:250:   required from here
31204 |         result = (CompuCell3D::NumpyArrayWrapper3DImpl< unsigned int > *)new CompuCell3D::NumpyArrayWrapper3DImpl< unsigned int >((std::vector< CompuCell3D::array_size_t,std::allocator< CompuCell3D::array_size_t > > const &)*arg1,SWIG_STD_MOVE(arg2));
      |                                                                                                                                                                                                                                                          ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<unsigned int>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<unsigned int>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:31901:101:   required from here
31901 |         result = (bool)((CompuCell3D::NumpyArrayWrapper3DImpl< unsigned int > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = long int; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:32018:234:   required from here
32018 |         result = (CompuCell3D::NumpyArrayWrapper3DImpl< long > *)new CompuCell3D::NumpyArrayWrapper3DImpl< long >((std::vector< CompuCell3D::array_size_t,std::allocator< CompuCell3D::array_size_t > > const &)*arg1,SWIG_STD_MOVE(arg2));
      |                                                                                                                                                                                                                                          ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<long int>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<long int>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = long int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:32715:93:   required from here
32715 |         result = (bool)((CompuCell3D::NumpyArrayWrapper3DImpl< long > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘CompuCell3D::NumpyArrayWrapper3DImpl<T>::NumpyArrayWrapper3DImpl(const std::vector<long unsigned int>&, CompuCell3D::array_size_t) [with T = long unsigned int; CompuCell3D::array_size_t = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:32832:252:   required from here
32832 |         result = (CompuCell3D::NumpyArrayWrapper3DImpl< unsigned long > *)new CompuCell3D::NumpyArrayWrapper3DImpl< unsigned long >((std::vector< CompuCell3D::array_size_t,std::allocator< CompuCell3D::array_size_t > > const &)*arg1,SWIG_STD_MOVE(arg2));
      |                                                                                                                                                                                                                                                            ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:39:31: warning: ‘CompuCell3D::NumpyArrayWrapper3DImpl<long unsigned int>::typeIndex’ will be initialized after [-Wreorder]
   39 |         const std::type_index typeIndex;
      |                               ^~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:53:32: warning:   base ‘CompuCell3D::NumpyArrayWrapperImpl<long unsigned int>’ [-Wreorder]
   53 |                 padding(padding)
      |                                ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:50:9: warning:   when initialized here [-Wreorder]
   50 |         NumpyArrayWrapper3DImpl(const std::vector<array_size_t> &dims, array_size_t padding=0) :
      |         ^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::NumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = long unsigned int]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:33529:102:   required from here
33529 |         result = (bool)((CompuCell3D::NumpyArrayWrapper3DImpl< unsigned long > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:151:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  151 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:152:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  152 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h:153:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  153 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/CC3D_Field3D.h:13:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::VectorNumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = float]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:34331:100:   required from here
34331 |         result = (bool)((CompuCell3D::VectorNumpyArrayWrapper3DImpl< float > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:141:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  141 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:142:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  142 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:143:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  143 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h: In instantiation of ‘bool CompuCell3D::VectorNumpyArrayWrapper3DImpl<T>::isValid(const CompuCell3D::Point3D&) const [with T = double]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:35187:101:   required from here
35187 |         result = (bool)((CompuCell3D::VectorNumpyArrayWrapper3DImpl< double > const *)arg1)->isValid((CompuCell3D::Point3D const &)*arg2);
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:141:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  141 |             return (0 <= pt.x && pt.x < this->dimensions[0] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:142:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  142 |                     0 <= pt.y && pt.y < this->dimensions[1] &&
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h:143:39: warning: comparison of integer expressions of different signedness: ‘const short int’ and ‘const __gnu_cxx::__alloc_traits<std::allocator<long unsigned int>, long unsigned int>::value_type’ {aka ‘const long unsigned int’} [-Wsign-compare]
  143 |                     0 <= pt.z && pt.z < this->dimensions[2]);
      |                                  ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h: In instantiation of ‘void CompuCell3D::FPPLinkInventoryBase<LinkType>::removeFromInventory(LinkType*) [with LinkType = CompuCell3D::FocalPointPlasticityLink]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:192153:36:   required from here
192153 |         (arg1)->removeFromInventory(arg2);
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h:169:13: warning: deleting object of polymorphic class type ‘CompuCell3D::FocalPointPlasticityLink’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
  169 |             delete _link;
      |             ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h: In instantiation of ‘void CompuCell3D::FPPLinkInventoryBase<LinkType>::removeFromInventory(LinkType*) [with LinkType = CompuCell3D::FocalPointPlasticityInternalLink]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:192992:36:   required from here
192992 |         (arg1)->removeFromInventory(arg2);
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h:169:13: warning: deleting object of polymorphic class type ‘CompuCell3D::FocalPointPlasticityInternalLink’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
  169 |             delete _link;
      |             ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h: In instantiation of ‘void CompuCell3D::FPPLinkInventoryBase<LinkType>::removeFromInventory(LinkType*) [with LinkType = CompuCell3D::FocalPointPlasticityAnchor]’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:193831:36:   required from here
193831 |         (arg1)->removeFromInventory(arg2);
       |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/core/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h:169:13: warning: deleting object of polymorphic class type ‘CompuCell3D::FocalPointPlasticityAnchor’ which has non-virtual destructor might cause undefined behavior [-Wdelete-non-virtual-dtor]
  169 |             delete _link;
      |             ^~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_ClusterSurfacePlugin_getNewOldClusterSurfaceDiffs(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:224093:54: note: parameter passing for argument of type ‘std::pair<double, double>’ when C++17 is enabled changed to match C++14 in GCC 10.1
224093 |         result = (arg1)->getNewOldClusterSurfaceDiffs((CompuCell3D::Point3D const &)*arg2,(CompuCell3D::CellG const *)arg3,(CompuCell3D::CellG const *)arg4);
       |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘PyObject* _wrap_ClusterSurfacePlugin_getTargetAndLambdaVolume(PyObject*, PyObject*)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:223956:93: note: parameter passing for argument of type ‘std::pair<float, float>’ when C++17 is enabled changed to match C++14 in GCC 10.1
223956 |         result = ((CompuCell3D::ClusterSurfacePlugin const *)arg1)->getTargetAndLambdaVolume((CompuCell3D::CellG const *)arg2);
       |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘float std_vector_Sl_float_Sg__get(std::vector<float>*, unsigned int)’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:10493:4: warning: control reaches end of non-void function [-Wreturn-type]
10493 |    }
      |    ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘_wrap_ClusterSurfacePlugin_getNewOldClusterSurfaceDiffs’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:223983:22: note: parameter passing for argument of type ‘struct pair’ when C++17 is enabled changed to match C++14 in GCC 10.1
223983 | SWIGINTERN PyObject *_wrap_ClusterSurfacePlugin_getNewOldClusterSurfaceDiffs(PyObject *self, PyObject *args) {
       |                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘_wrap_ClusterSurfacePlugin_getTargetAndLambdaVolume’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:223929:22: note: parameter passing for argument of type ‘struct pair’ when C++17 is enabled changed to match C++14 in GCC 10.1
223929 | SWIGINTERN PyObject *_wrap_ClusterSurfacePlugin_getTargetAndLambdaVolume(PyObject *self, PyObject *args) {
       |                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[395/395] : && /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -fpermissive -fopenmp -DNDEBUG  -shared -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,--dependency-file=core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/link.d  -o core/pyinterface/CompuCellPython/_CompuCell.so core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx.o  -Wl,-rpath,"\$ORIGIN/../PyPlugin:\$ORIGIN/../../CompuCell3D/steppables/BiasVectorSteppable:\$ORIGIN/../../CompuCell3D/plugins/ImplicitMotility:\$ORIGIN/../../CompuCell3D/plugins/Chemotaxis:\$ORIGIN/../../CompuCell3D/plugins/FocalPointPlasticity:\$ORIGIN/../../CompuCell3D/plugins/Plasticity:\$ORIGIN/../../CompuCell3D/plugins/VolumeTracker:\$ORIGIN/../../CompuCell3D/plugins/CenterOfMass:\$ORIGIN/../../CompuCell3D/plugins/Mitosis:\$ORIGIN/../../CompuCell3D/steppables/Mitosis:\$ORIGIN/../../CompuCell3D/plugins/ClusterSurface:\$ORIGIN/../../CompuCell3D/plugins/ClusterSurfaceTracker:\$ORIGIN/../../CompuCell3D/plugins/Elasticity:\$ORIGIN/../../CompuCell3D/plugins/ContactLocalFlex:\$ORIGIN/../../CompuCell3D/plugins/ContactLocalProduct:\$ORIGIN/../../CompuCell3D/plugins/ContactMultiCad:\$ORIGIN/../../CompuCell3D/plugins/AdhesionFlex:\$ORIGIN/../../CompuCell3D/plugins/ConnectivityLocalFlex:\$ORIGIN/../../CompuCell3D/plugins/ConnectivityGlobal:\$ORIGIN/../../CompuCell3D/plugins/LengthConstraint:\$ORIGIN/../../CompuCell3D/plugins/BoundaryMonitor:\$ORIGIN/../../CompuCell3D/plugins/MomentOfInertia:\$ORIGIN/../../CompuCell3D/plugins/Secretion:\$ORIGIN/../../CompuCell3D/plugins/CellOrientation:\$ORIGIN/../../CompuCell3D/plugins/PolarizationVector:\$ORIGIN/../../CompuCell3D/plugins/Polarization23:\$ORIGIN/../../CompuCell3D/plugins/OrientedGrowth:\$ORIGIN/../../CompuCell3D/plugins/OrientedGrowth2:\$ORIGIN/../../CompuCell3D/plugins/ContactOrientation:\$ORIGIN/../../CompuCell3D/plugins/CurvatureCalculator:\$ORIGIN/../../CompuCell3D/steppables/PDESolvers:\$ORIGIN/../../CompuCell3D/plugins/VectorFieldPolarization:\$ORIGIN/../../CompuCell3D/steppables/FieldManager:\$ORIGIN/../../CompuCell3D/plugins/PlasticityTracker:\$ORIGIN/../../CompuCell3D/plugins/ElasticityTracker:\$ORIGIN/../../CompuCell3D/plugins/BoundaryPixelTracker:\$ORIGIN/../../CompuCell3D/plugins/NeighborTracker:\$ORIGIN/../../CompuCell3D/plugins/PixelTracker:\$ORIGIN/../../CompuCell3D/steppables/BoxWatcher:\$ORIGIN/../../CompuCell3D/plugins/CellType:\$ORIGIN/../../CompuCell3D:\$ORIGIN/../../CompuCell3D/Automaton:\$ORIGIN/../../CompuCell3D/Potts3D:\$ORIGIN/../../muParser/ExpressionEvaluator:\$ORIGIN/../../XMLUtils:\$ORIGIN/../../PublicUtilities:\$ORIGIN/../../CompuCell3D/Boundary:\$ORIGIN/../../CompuCell3D/Field3D:\$ORIGIN/../../Logger:\$ORIGIN/../../muParser:"  /usr/lib64/libpython3.14.so  core/pyinterface/PyPlugin/libPyPlugin.so.4.9.0  core/CompuCell3D/steppables/BiasVectorSteppable/libCC3DBiasVectorSteppable.so.4.9.0  core/CompuCell3D/plugins/ImplicitMotility/libCC3DImplicitMotility.so.4.9.0  core/CompuCell3D/plugins/Chemotaxis/libCC3DChemotaxis.so.4.9.0  core/CompuCell3D/plugins/FocalPointPlasticity/libCC3DFocalPointPlasticity.so.4.9.0  core/CompuCell3D/plugins/Plasticity/libCC3DPlasticity.so.4.9.0  core/CompuCell3D/plugins/VolumeTracker/libCC3DVolumeTracker.so.4.9.0  core/CompuCell3D/plugins/CenterOfMass/libCC3DCenterOfMass.so.4.9.0  core/CompuCell3D/plugins/Mitosis/libCC3DMitosis.so.4.9.0  core/CompuCell3D/steppables/Mitosis/libCC3DMitosisSteppable.so.4.9.0  core/CompuCell3D/plugins/ClusterSurface/libCC3DClusterSurface.so.4.9.0  core/CompuCell3D/plugins/ClusterSurfaceTracker/libCC3DClusterSurfaceTracker.so.4.9.0  core/CompuCell3D/plugins/Elasticity/libCC3DElasticity.so.4.9.0  core/CompuCell3D/plugins/ContactLocalFlex/libCC3DContactLocalFlex.so.4.9.0  core/CompuCell3D/plugins/ContactLocalProduct/libCC3DContactLocalProduct.so.4.9.0  core/CompuCell3D/plugins/ContactMultiCad/libCC3DContactMultiCad.so.4.9.0  core/CompuCell3D/plugins/AdhesionFlex/libCC3DAdhesionFlex.so.4.9.0  core/CompuCell3D/plugins/ConnectivityLocalFlex/libCC3DConnectivityLocalFlex.so.4.9.0  core/CompuCell3D/plugins/ConnectivityGlobal/libCC3DConnectivityGlobal.so.4.9.0  core/CompuCell3D/plugins/LengthConstraint/libCC3DLengthConstraint.so.4.9.0  core/CompuCell3D/plugins/BoundaryMonitor/libCC3DBoundaryMonitor.so.4.9.0  core/CompuCell3D/plugins/MomentOfInertia/libCC3DMomentOfInertia.so.4.9.0  core/CompuCell3D/plugins/Secretion/libCC3DSecretion.so.4.9.0  core/CompuCell3D/plugins/CellOrientation/libCC3DCellOrientation.so.4.9.0  core/CompuCell3D/plugins/PolarizationVector/libCC3DPolarizationVector.so.4.9.0  core/CompuCell3D/plugins/Polarization23/libCC3DPolarization23.so.4.9.0  core/CompuCell3D/plugins/OrientedGrowth/libCC3DOrientedGrowth.so.4.9.0  core/CompuCell3D/plugins/OrientedGrowth2/libCC3DOrientedGrowth2.so.4.9.0  core/CompuCell3D/plugins/ContactOrientation/libCC3DContactOrientation.so.4.9.0  core/CompuCell3D/plugins/CurvatureCalculator/libCC3DCurvatureCalculator.so.4.9.0  core/CompuCell3D/steppables/PDESolvers/libCC3DPDESolvers.so.4.9.0  core/CompuCell3D/plugins/VectorFieldPolarization/libCC3DVectorFieldPolarization.so.4.9.0  core/CompuCell3D/steppables/FieldManager/libCC3DFieldManager.so.4.9.0  /usr/lib64/libpython3.14.so  core/CompuCell3D/plugins/PlasticityTracker/libCC3DPlasticityTracker.so.4.9.0  core/CompuCell3D/plugins/ElasticityTracker/libCC3DElasticityTracker.so.4.9.0  core/CompuCell3D/plugins/BoundaryPixelTracker/libCC3DBoundaryPixelTracker.so.4.9.0  core/CompuCell3D/plugins/NeighborTracker/libCC3DNeighborTracker.so.4.9.0  core/CompuCell3D/plugins/PixelTracker/libCC3DPixelTracker.so.4.9.0  core/CompuCell3D/steppables/BoxWatcher/libCC3DBoxWatcher.so.4.9.0  core/CompuCell3D/plugins/CellType/libCC3DCellType.so.4.9.0  core/CompuCell3D/libCC3DCompuCellLib.so.4.9.0  core/CompuCell3D/Automaton/libCC3DAutomaton.so.4.9.0  -ldl  core/CompuCell3D/Potts3D/libCC3DPotts3D.so.4.9.0  core/muParser/ExpressionEvaluator/libCC3DExpressionEvaluator.so.4.9.0  core/XMLUtils/libCC3DXMLUtils.so.4.9.0  core/PublicUtilities/libCC3DPublicUtilities.so.4.9.0  core/CompuCell3D/Boundary/libCC3DBoundary.so.4.9.0  core/CompuCell3D/Field3D/libCC3DField3D.so.4.9.0  core/Logger/libCC3DLogger.so.4.9.0  /usr/lib/gcc/aarch64-redhat-linux/16/libgomp.so  /usr/lib64/libpthread.a  -lgomp  core/muParser/libCC3DmuParser.so.4.9.0 && :
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘_wrap_ClusterSurfacePlugin_getTargetAndLambdaVolume’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:223929:22: note: parameter passing for argument of type ‘struct pair’ when C++17 is enabled changed to match C++14 in GCC 10.1
223929 | SWIGINTERN PyObject *_wrap_ClusterSurfacePlugin_getTargetAndLambdaVolume(PyObject *self, PyObject *args) {
       |                      ^
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx: In function ‘_wrap_ClusterSurfacePlugin_getNewOldClusterSurfaceDiffs’:
/builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/redhat-linux-build/core/pyinterface/CompuCellPython/CMakeFiles/CompuCell.dir/CompuCellPYTHON_wrap.cxx:223983:22: note: parameter passing for argument of type ‘struct pair’ when C++17 is enabled changed to match C++14 in GCC 10.1
223983 | SWIGINTERN PyObject *_wrap_ClusterSurfacePlugin_getNewOldClusterSurfaceDiffs(PyObject *self, PyObject *args) {
       |                      ^

+ popd
~/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.YpFCda
+ umask 022
+ cd /builddir/build/BUILD/compucell3d-4.9.0-build
+ '[' /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT '!=' / ']'
+ rm -rf /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT
++ dirname /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT
+ mkdir -p /builddir/build/BUILD/compucell3d-4.9.0-build
+ mkdir /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd CompuCell3D-780374e5e17145de12452aeabd224710134fa53f
+ pushd CompuCell3D
~/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D ~/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f
+ DESTDIR=/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT
+ /usr/bin/cmake --install redhat-linux-build
-- Install configuration: "Release"
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DLogger.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DLogger.so.4.9
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DLogger.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-Logger-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-Logger-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/Logger/CC3DLogger.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/Utils/cldeque.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/Utils/Coordinates3D.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/Utils/CC3D_Utils.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DPublicUtilities.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DPublicUtilities.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DPublicUtilities.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DPublicUtilities.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-PublicUtilities-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-PublicUtilities-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/PublicUtilities/FileUtils.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/PublicUtilities/NumericalUtils.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/PublicUtilities/StringUtils.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/PublicUtilities/Vector3.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/PublicUtilities/ParallelUtilsOpenMP.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/PublicUtilities/CC3D_PublicUtilities.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DXMLUtils.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DXMLUtils.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DXMLUtils.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DXMLUtils.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-XMLUtils-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-XMLUtils-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/XMLUtils/CC3DXMLElement.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/XMLUtils/CC3DXMLElementWalker.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/XMLUtils/XMLParserExpatLibDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/XMLUtils/XMLUtilsDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/XMLUtils/CC3D_XMLUtils.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DmuParser.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DmuParser.so.4.9
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DmuParser.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-muParser-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-muParser-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DExpressionEvaluator.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DExpressionEvaluator.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DExpressionEvaluator.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DExpressionEvaluator.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-ExpressionEvaluator-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-ExpressionEvaluator-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/muParser/ExpressionEvaluator/ExpressionEvaluator.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/muParser/ExpressionEvaluator/ExpressionEvaluatorDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/muParser/muParser.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/muParser/muParserBase.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/muParser/muParserBytecode.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/muParser/muParserCallback.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/muParser/muParserDef.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/muParser/muParserDLL.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/muParser/muParserError.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/muParser/muParserFixes.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/muParser/muParserInt.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/muParser/muParserTest.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/muParser/muParserTemplateMagic.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/muParser/muParserToken.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/muParser/muParserTokenReader.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/muParser/CC3D_muParser.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DField3D.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DField3D.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DField3D.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DField3D.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-Field3D-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-Field3D-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Field3D/AdjacentNeighbor.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Field3D/Dim3D.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Field3D/Array3D.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Field3D/Field3DTypeBase.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Field3D/Field3DChangeWatcher.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Field3D/Field3D.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Field3D/Field3DImpl.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Field3D/Field3DIndex.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Field3D/Field3DIO.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Field3D/NeighborFinder.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Field3D/Neighbor.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Field3D/Point3D.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Field3D/WatchableField3D.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Field3D/CC3D_Field3D.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Field3D/NumpyArrayWrapper.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Field3D/NumpyArrayWrapperImpl.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Field3D/NumpyArrayWrapper3DImpl.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Field3D/VectorField3D.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Field3D/VectorNumpyArrayWrapper3DImpl.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DAutomaton.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DAutomaton.so.4.9
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DAutomaton.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-Automaton-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-Automaton-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Automaton/Automaton.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Automaton/CellType.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Automaton/Transition.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Automaton/CC3D_Automaton.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DBoundary.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DBoundary.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DBoundary.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DBoundary.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-Boundary-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-Boundary-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Boundary/AlgorithmFactory.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Boundary/Algorithm.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Boundary/BoundaryFactory.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Boundary/Boundary.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Boundary/BoundaryTypeDefinitions.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Boundary/BoundaryStrategy.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Boundary/BoundaryDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Boundary/ChengbangAlgorithm.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Boundary/DefaultAlgorithm.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Boundary/NoFluxBoundary.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Boundary/PeriodicBoundary.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Boundary/CC3D_Boundary.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DPotts3D.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DPotts3D.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DPotts3D.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DPotts3D.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-Potts3D-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-Potts3D-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/AcceptanceFunction.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/AttributeAdder.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/CellChangeWatcher.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/CellGChangeWatcher.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/Cell.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/CellInventoryWatcher.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/CellInventory.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/CellTypeMotilityData.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/DefaultAcceptanceFunction.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/CustomAcceptanceFunction.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/EnergyFunction.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/EnergyFunctionCalculator.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/EnergyFunctionCalculatorStatistics.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/EnergyFunctionCalculatorTestDataGeneration.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/FirstOrderExpansionAcceptanceFunction.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/FixedStepper.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/Potts3D.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/PottsTestData.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/Stepper.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/TypeChangeWatcher.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/TypeTransition.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/FluctuationAmplitudeFunction.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/StandardFluctuationAmplitudeFunctions.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Potts3D/CC3D_Potts3D.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DVectorFieldPolarization.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DVectorFieldPolarization.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DVectorFieldPolarization.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DVectorFieldPolarization.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-VectorFieldPolarization-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-VectorFieldPolarization-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/VectorFieldPolarization/VectorFieldPolarizationDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/VectorFieldPolarization/VectorFieldPolarizationPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DImplicitMotility.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DImplicitMotility.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DImplicitMotility.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DImplicitMotility.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ImplicitMotility-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ImplicitMotility-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ImplicitMotility/ImplicitMotilityDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ImplicitMotility/ImplicitMotilityPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCurvatureCalculator.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCurvatureCalculator.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCurvatureCalculator.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCurvatureCalculator.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-CurvatureCalculator-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-CurvatureCalculator-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/CurvatureCalculator/CurvatureCalculatorPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DOrientedGrowth.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DOrientedGrowth.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DOrientedGrowth.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DOrientedGrowth.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-OrientedGrowth-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-OrientedGrowth-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/OrientedGrowth/OrientedGrowthDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/OrientedGrowth/OrientedGrowthData.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/OrientedGrowth/OrientedGrowthPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DOrientedGrowth2.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DOrientedGrowth2.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DOrientedGrowth2.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DOrientedGrowth2.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-OrientedGrowth2-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-OrientedGrowth2-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2DLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2Data.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/OrientedGrowth2/OrientedGrowth2Plugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContactOrientation.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContactOrientation.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContactOrientation.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContactOrientation.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ContactOrientation-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ContactOrientation-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ContactOrientation/ContactOrientationDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ContactOrientation/ContactOrientationData.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ContactOrientation/ContactOrientationPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DBoundaryMonitor.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DBoundaryMonitor.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DBoundaryMonitor.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DBoundaryMonitor.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-BoundaryMonitor-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-BoundaryMonitor-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/BoundaryMonitor/BoundaryMonitorDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/BoundaryMonitor/BoundaryMonitorPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCellTypeMonitor.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCellTypeMonitor.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCellTypeMonitor.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCellTypeMonitor.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-CellTypeMonitor-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-CellTypeMonitor-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/CellTypeMonitor/CellTypeMonitorDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/CellTypeMonitor/CellTypeMonitorPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPolarization23.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPolarization23.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPolarization23.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPolarization23.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Polarization23-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Polarization23-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Polarization23/Polarization23DLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Polarization23/Polarization23Data.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Polarization23/Polarization23Plugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DClusterSurface.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DClusterSurface.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DClusterSurface.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DClusterSurface.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ClusterSurface-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ClusterSurface-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ClusterSurface/ClusterSurfaceDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ClusterSurface/ClusterSurfacePlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DClusterSurfaceTracker.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DClusterSurfaceTracker.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DClusterSurfaceTracker.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DClusterSurfaceTracker.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ClusterSurfaceTracker-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ClusterSurfaceTracker-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ClusterSurfaceTracker/ClusterSurfaceTrackerPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCellType.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCellType.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCellType.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCellType.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-CellType-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-CellType-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/CellType/CellTypeDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/CellType/CellTypeG.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/CellType/CellTypePlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DVolumeTracker.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DVolumeTracker.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DVolumeTracker.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DVolumeTracker.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-VolumeTracker-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-VolumeTracker-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/VolumeTracker/VolumeTrackerDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/VolumeTracker/VolumeTrackerPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DVolume.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DVolume.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DVolume.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DVolume.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Volume-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Volume-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Volume/VolumeDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Volume/VolumePlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContact.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContact.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContact.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContact.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Contact-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Contact-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Contact/ContactDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Contact/ContactPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DSurface.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DSurface.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DSurface.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DSurface.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Surface-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Surface-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Surface/SurfaceDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Surface/SurfacePlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DSurfaceTracker.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DSurfaceTracker.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DSurfaceTracker.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DSurfaceTracker.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-SurfaceTracker-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-SurfaceTracker-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/SurfaceTracker/SurfaceTrackerDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/SurfaceTracker/SurfaceTrackerPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DAdhesionFlex.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DAdhesionFlex.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DAdhesionFlex.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DAdhesionFlex.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-AdhesionFlex-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-AdhesionFlex-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexData.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/AdhesionFlex/AdhesionFlexPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DMitosis.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DMitosis.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DMitosis.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DMitosis.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Mitosis-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Mitosis-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Mitosis/MitosisDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Mitosis/MitosisPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Mitosis/MitosisSimplePlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DChemotaxis.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DChemotaxis.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DChemotaxis.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DChemotaxis.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Chemotaxis-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Chemotaxis-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Chemotaxis/ChemotaxisDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Chemotaxis/ChemotaxisData.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Chemotaxis/ChemotaxisPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DChemotaxisSimple.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DChemotaxisSimple.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DChemotaxisSimple.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DChemotaxisSimple.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ChemotaxisSimple-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ChemotaxisSimple-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ChemotaxisSimple/ChemotaxisSimpleDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ChemotaxisSimple/ChemotaxisSimpleEnergy.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCenterOfMass.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCenterOfMass.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCenterOfMass.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCenterOfMass.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-CenterOfMass-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-CenterOfMass-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/CenterOfMass/CenterOfMassDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/CenterOfMass/CenterOfMassPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DMomentOfInertia.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DMomentOfInertia.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DMomentOfInertia.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DMomentOfInertia.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-MomentOfInertia-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-MomentOfInertia-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/MomentOfInertia/CellMomentOfInertia.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/MomentOfInertia/MomentOfInertiaDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/MomentOfInertia/MomentOfInertiaPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DConvergentExtension.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DConvergentExtension.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DConvergentExtension.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DConvergentExtension.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ConvergentExtension-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ConvergentExtension-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ConvergentExtension/ConvergentExtensionDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ConvergentExtension/ConvergentExtensionPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DNeighborTracker.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DNeighborTracker.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DNeighborTracker.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DNeighborTracker.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-NeighborTracker-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-NeighborTracker-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/NeighborTracker/NeighborTracker.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/NeighborTracker/NeighborTrackerDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/NeighborTracker/NeighborTrackerPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPDESolverCaller.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPDESolverCaller.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPDESolverCaller.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPDESolverCaller.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-PDESolverCaller-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-PDESolverCaller-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/PDESolverCaller/PDESolverCallerDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/PDESolverCaller/PDESolverCallerPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContactLocalFlex.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContactLocalFlex.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContactLocalFlex.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContactLocalFlex.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ContactLocalFlex-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ContactLocalFlex-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ContactLocalFlex/ContactLocalFlexDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ContactLocalFlex/ContactLocalFlexData.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ContactLocalFlex/ContactLocalFlexPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContactLocalProduct.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContactLocalProduct.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContactLocalProduct.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContactLocalProduct.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ContactLocalProduct-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ContactLocalProduct-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductData.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ContactLocalProduct/ContactLocalProductPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContactMultiCad.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContactMultiCad.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContactMultiCad.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContactMultiCad.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ContactMultiCad-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ContactMultiCad-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadData.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ContactMultiCad/ContactMultiCadPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DFocalPointPlasticity.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DFocalPointPlasticity.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DFocalPointPlasticity.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DFocalPointPlasticity.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-FocalPointPlasticity-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-FocalPointPlasticity-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventory.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinkInventoryBase.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityLinks.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/FocalPointPlasticity/FocalPointPlasticityTracker.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCurvature.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCurvature.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCurvature.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCurvature.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Curvature-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Curvature-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Curvature/CurvatureDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Curvature/CurvaturePlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Curvature/CurvatureTracker.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DExternalPotential.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DExternalPotential.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DExternalPotential.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DExternalPotential.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ExternalPotential-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ExternalPotential-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ExternalPotential/ExternalPotentialDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ExternalPotential/ExternalPotentialPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCompartment.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCompartment.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCompartment.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCompartment.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Compartment-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Compartment-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Compartment/CompartmentDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Compartment/CompartmentPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContactInternal.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContactInternal.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContactInternal.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DContactInternal.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ContactInternal-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ContactInternal-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ContactInternal/ContactInternalDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ContactInternal/ContactInternalPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DConnectivity.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DConnectivity.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DConnectivity.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DConnectivity.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Connectivity-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Connectivity-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Connectivity/ConnectivityDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Connectivity/ConnectivityPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DConnectivityLocalFlex.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DConnectivityLocalFlex.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DConnectivityLocalFlex.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DConnectivityLocalFlex.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ConnectivityLocalFlex-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ConnectivityLocalFlex-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ConnectivityLocalFlex/ConnectivityLocalFlexDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ConnectivityLocalFlex/ConnectivityLocalFlexData.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ConnectivityLocalFlex/ConnectivityLocalFlexPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DConnectivityGlobal.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DConnectivityGlobal.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DConnectivityGlobal.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DConnectivityGlobal.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ConnectivityGlobal-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ConnectivityGlobal-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ConnectivityGlobal/ConnectivityGlobalDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ConnectivityGlobal/ConnectivityGlobalData.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ConnectivityGlobal/ConnectivityGlobalPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DLengthConstraint.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DLengthConstraint.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DLengthConstraint.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DLengthConstraint.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-LengthConstraint-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-LengthConstraint-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/LengthConstraint/LengthConstraintDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/LengthConstraint/LengthConstraintData.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/LengthConstraint/LengthConstraintPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCellOrientation.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCellOrientation.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCellOrientation.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DCellOrientation.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-CellOrientation-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-CellOrientation-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/CellOrientation/CellOrientationDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/CellOrientation/CellOrientationPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/CellOrientation/CellOrientationVector.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DElasticityTracker.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DElasticityTracker.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DElasticityTracker.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DElasticityTracker.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ElasticityTracker-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-ElasticityTracker-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ElasticityTracker/ElasticityTracker.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ElasticityTracker/ElasticityTrackerDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/ElasticityTracker/ElasticityTrackerPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DElasticity.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DElasticity.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DElasticity.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DElasticity.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Elasticity-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Elasticity-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Elasticity/ElasticityDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Elasticity/ElasticityPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPlasticityTracker.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPlasticityTracker.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPlasticityTracker.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPlasticityTracker.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-PlasticityTracker-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-PlasticityTracker-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/PlasticityTracker/PlasticityTracker.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/PlasticityTracker/PlasticityTrackerDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/PlasticityTracker/PlasticityTrackerPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPlasticity.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPlasticity.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPlasticity.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPlasticity.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Plasticity-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Plasticity-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Plasticity/PlasticityDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Plasticity/PlasticityPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DOrientedContact.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DOrientedContact.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DOrientedContact.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DOrientedContact.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-OrientedContact-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-OrientedContact-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/OrientedContact/OrientedContactDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/OrientedContact/OrientedContactPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPolarizationVector.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPolarizationVector.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPolarizationVector.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPolarizationVector.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-PolarizationVector-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-PolarizationVector-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/PolarizationVector/PolarizationVector.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/PolarizationVector/PolarizationVectorDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/PolarizationVector/PolarizationVectorPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPixelTracker.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPixelTracker.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPixelTracker.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DPixelTracker.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-PixelTracker-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-PixelTracker-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/PixelTracker/PixelTracker.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/PixelTracker/PixelTrackerDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/PixelTracker/PixelTrackerPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DBoundaryPixelTracker.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DBoundaryPixelTracker.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DBoundaryPixelTracker.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DBoundaryPixelTracker.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-BoundaryPixelTracker-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-BoundaryPixelTracker-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTracker.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTrackerDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/BoundaryPixelTracker/BoundaryPixelTrackerPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DGlobalBoundaryPixelTracker.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DGlobalBoundaryPixelTracker.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DGlobalBoundaryPixelTracker.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DGlobalBoundaryPixelTracker.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-GlobalBoundaryPixelTracker-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-GlobalBoundaryPixelTracker-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/GlobalBoundaryPixelTracker/GlobalBoundaryPixelTrackerDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/GlobalBoundaryPixelTracker/GlobalBoundaryPixelTrackerPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DViscosity.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DViscosity.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DViscosity.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DViscosity.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Viscosity-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Viscosity-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Viscosity/ViscosityDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Viscosity/ViscosityPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DSecretion.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DSecretion.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DSecretion.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins/libCC3DSecretion.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Secretion-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-plugin-Secretion-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Secretion/FieldSecretor.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Secretion/SecretionDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Secretion/SecretionDataP.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/plugins/Secretion/SecretionPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DFieldManager.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DFieldManager.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DFieldManager.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DFieldManager.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-FieldManager-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-FieldManager-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/FieldManager/FieldManager.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/FieldManager/FieldManagerDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DBiasVectorSteppable.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DBiasVectorSteppable.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DBiasVectorSteppable.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DBiasVectorSteppable.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-BiasVectorSteppable-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-BiasVectorSteppable-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/BiasVectorSteppable/BiasVectorSteppable.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/BiasVectorSteppable/BiasVectorSteppableDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DPIFInitializer.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DPIFInitializer.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DPIFInitializer.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DPIFInitializer.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-PIFInitializer-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-PIFInitializer-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PIFInitializer/PIFInitializer.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PIFInitializer/PIFInitializerDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DPIFDumper.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DPIFDumper.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DPIFDumper.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DPIFDumper.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-PIFDumper-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-PIFDumper-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PIFDumper/PIFDumper.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PIFDumper/PIFDumperDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DBlobFieldInitializer.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DBlobFieldInitializer.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DBlobFieldInitializer.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DBlobFieldInitializer.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-BlobFieldInitializer-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-BlobFieldInitializer-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/BlobFieldInitializer/BlobFieldInitializer.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/BlobFieldInitializer/BlobFieldInitializerDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DUniformFieldInitializer.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DUniformFieldInitializer.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DUniformFieldInitializer.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DUniformFieldInitializer.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-UniformFieldInitializer-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-UniformFieldInitializer-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/UniformFieldInitializer/UniformFieldInitializer.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/UniformFieldInitializer/UniformFieldInitializerDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DPolygonFieldInitializer.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DPolygonFieldInitializer.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DPolygonFieldInitializer.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DPolygonFieldInitializer.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-PolygonFieldInitializer-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-PolygonFieldInitializer-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PolygonFieldInitializer/PolygonFieldInitializer.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PolygonFieldInitializer/PolygonFieldInitializerDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DTubeFieldInitializer.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DTubeFieldInitializer.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DTubeFieldInitializer.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DTubeFieldInitializer.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-TubeFieldInitializer-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-TubeFieldInitializer-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializer.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/TubeFieldInitializer/TubeFieldInitializerDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DPDESolvers.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DPDESolvers.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DPDESolvers.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DPDESolvers.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-PDESolvers-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-PDESolvers-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/AdvectionDiffusionSolverFE.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/BoundaryConditionSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/DiffSecrData.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/Diffusable.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/DiffusableGraph.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/DiffusableVector.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/DiffusableVector2D.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/DiffusableVectorCommon.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/DiffusableVectorFortran.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/FastDiffusionSolver2DFE.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverFE.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverFE_GPU.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverFE_GPU.hpp
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverFE_GPU_Device.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/GPUSolverBasicData.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/GPUSolverParams.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/MyTime.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/PDESolversDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/PDESolversGPUDllSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE_SavHog.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver2D.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/f2c.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/hpppdesolvers.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/AdvectionDiffusionSolverFE.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/BoundaryConditionSpecifier.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/DiffSecrData.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/Diffusable.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/DiffusableGraph.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/DiffusableVector.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/DiffusableVector2D.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/DiffusableVectorCommon.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/DiffusableVectorFortran.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/DiffusionSolverFE_CPU_Implicit.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/FastDiffusionSolver2DFE.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverADE.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverFE.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverFE_GPU.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/FlexibleDiffusionSolverFE_GPU_Device.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/FlexibleReactionDiffusionSolverFE.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/FluctuationCompensator.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/GPUSolverBasicData.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/GPUSolverParams.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/KernelDiffusionSolver.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/MyTime.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/PDESolversDLLSpecifier.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/PDESolversGPUDllSpecifier.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFE_SavHog.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/ReactionDiffusionSolverFVM.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/SteadyStateDiffusionSolver2D.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/f2c.h
-- Up-to-date: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/PDESolvers/hpppdesolvers.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DFoamDataOutput.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DFoamDataOutput.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DFoamDataOutput.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DFoamDataOutput.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-FoamDataOutput-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-FoamDataOutput-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/FoamDataOutput/FoamDataOutput.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/FoamDataOutput/FoamDataOutputDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DBoxWatcher.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DBoxWatcher.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DBoxWatcher.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DBoxWatcher.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-BoxWatcher-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-BoxWatcher-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/BoxWatcher/BoxWatcher.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/BoxWatcher/BoxWatcherDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DMitosisSteppable.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DMitosisSteppable.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DMitosisSteppable.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DMitosisSteppable.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-MitosisSteppable-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-MitosisSteppable-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/MitosisSteppable/MitosisSteppable.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/MitosisSteppable/MitosisSteppableDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DObjInitializer.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DObjInitializer.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DObjInitializer.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DObjInitializer.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-ObjInitializer-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-ObjInitializer-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/ObjInitializer/ObjInitializer.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/ObjInitializer/ObjInitializerDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DRandomInitializers.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DRandomInitializers.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DRandomInitializers.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables/libCC3DRandomInitializers.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-RandomInitializers-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-steppable-RandomInitializers-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/RandomInitializers/FieldBuilder.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/RandomInitializers/RandomBlobInitializer.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/RandomInitializers/RandomFieldInitializer.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/steppables/RandomInitializers/RandomFieldInitializerDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DCompuCellLib.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DCompuCellLib.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DCompuCellLib.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DCompuCellLib.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-CompuCellLib-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-CompuCellLib-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/ClassRegistry.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/CompuCellLibDLLSpecifier.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/DerivedProperty.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/ExtraMembers.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/ParseData.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Parser.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/ParserStorage.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Plugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/PluginBase.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/PluginInfo.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/PluginManager.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/PottsParseData.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/RandomNumberGenerators.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Serializer.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/SimObject.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Simulator.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/SteerableObject.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/Steppable.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/CC3D.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/CC3D_Main.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/CC3D_STL.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/CC3DEvents.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/CompuCell3D/CompuCell3D/CC3DExceptions.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/_CC3DXML.so
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/_CC3DXML.so" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CC3DXML.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/_CompuCell.so
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/_CompuCell.so" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libFieldExtractor.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libFieldExtractor.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libFieldExtractor.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libFieldExtractor.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-FieldExtractor-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-FieldExtractor-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/_PlayerPython.so
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/_PlayerPython.so" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/PlayerPython.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libSerializerDE.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libSerializerDE.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libSerializerDE.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libSerializerDE.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-SerializerDE-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-SerializerDE-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/_SerializerDEPy.so
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/_SerializerDEPy.so" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/SerializerDEPy.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/SerializerDE/SerializerDE.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libPyPlugin.so.4.9.0
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libPyPlugin.so.4.9
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libPyPlugin.so.4.9.0" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libPyPlugin.so
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-PyPlugin-config.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-PyPlugin-config-release.cmake
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/pyinterface/PyPlugin/PyPlugin.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/pyinterface/PyPlugin/PyCompuCellObjAdapter.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/pyinterface/PyPlugin/EnergyFunctionPyWrapper.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/pyinterface/PyPlugin/ChangeWatcherPyWrapper.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/pyinterface/PyPlugin/StepperPyWrapper.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/pyinterface/PyPlugin/TypeChangeWatcherPyWrapper.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/pyinterface/PyPlugin/NeighborFinderParams.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/include/pyinterface/PyPlugin/PyAttributeAdder.h
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/_CC3DAuxFields.so
-- Set non-toolchain portion of runtime path of "/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/_CC3DAuxFields.so" to ""
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CC3DAuxFields.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/__init__.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/run_script.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/_version.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/xml_schema
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/xml_schema/cc3d_schema.xsd
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/utils.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/simulation_utils.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/simulation_setup.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/simulation_player_utils.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/sim_runner.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/readers.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/persistent_globals.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/cluster_utils.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/__init__.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/SimulationThread.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/CC3DRenderer.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/CC3DPy.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/CC3DCaller.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/utils.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/simservice
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/simservice/__init__.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/simservice/SimulationServiceThread.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/simservice/PyServiceCC3D.py
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-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/param_scan/parameter_scan_utils.py
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-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/enums.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/developer_zone
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-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/XMLUtils.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/XMLDomUtils.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/Validation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/Validation/sanity_checkers.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/Validation/PDESuiteTest.py
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-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/SteppableRegistry.py
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-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/SteeringParam.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/SBMLSolverHelper.py
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-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/MaBoSSCC3D.py
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-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/utils.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/__init__.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/ScreenshotManagerCore.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/ScreenshotData.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/SceneData.py
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-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/JupyterWidgetInterface.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/JupyterGraphicsFrameWidget.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/JupyterControlPanel.py
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-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/GraphicsFrame.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/CC3DPyGraphicsFrameIO.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/CC3DPyGraphicsFrame.py
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-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/Specs.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/MetadataHandler.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/MVCDrawViewBase.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/MVCDrawView3D.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/MVCDrawView2D.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/MVCDrawModelBase.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/MVCDrawModel3D.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/MVCDrawModel2D.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/GenericDrawer.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/DrawingParameters.py
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-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/FieldRegistry.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/FieldCopier.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/ExtraFieldAdapter.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/DefaultSettingsData.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/CoreSpecsRegistry.py
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-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/oriented-cellsort_test_generate/oriented-cellsort.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/oriented-cellsort_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/oriented-cellsort_test_generate/Simulation/oriented_cellsort.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/oriented-cellsort_test_generate/Simulation/oriented-cellsort.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/oriented-cellsort_test_generate/Simulation/initial_configuration.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationTest3D_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationTest3D_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationTest3D_test_run/elongationTest3D.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationTest3D_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationTest3D_test_run/Simulation/elongationTest3D.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationTest3D_test_run/Simulation/elongationTest3D.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationTest3D_test_run/Simulation/elongationTest3D.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationTest3D_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationTest3D_test_generate/elongationTest3D.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationTest3D_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationTest3D_test_generate/Simulation/elongationTest3D.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationTest3D_test_generate/Simulation/elongationTest3D.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationTest3D_test_generate/Simulation/elongationTest3D.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationFlexTest_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationFlexTest_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationFlexTest_test_run/elongationFlexTest.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationFlexTest_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationFlexTest_test_run/Simulation/elongationFlexTest.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationFlexTest_test_run/Simulation/elongationFlexTest.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationFlexTest_test_run/Simulation/elongationFlexTest.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationFlexTest_test_run/Simulation/elongationFlexSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationFlexTest_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationFlexTest_test_generate/elongationFlexTest.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationFlexTest_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationFlexTest_test_generate/Simulation/elongationFlexTest.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationFlexTest_test_generate/Simulation/elongationFlexTest.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationFlexTest_test_generate/Simulation/elongationFlexTest.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/elongationFlexTest_test_generate/Simulation/elongationFlexSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_test_run/connectivity_global_fast.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_test_run/Simulation/initial_configuration.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_test_run/Simulation/connectivity_global_fastSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_test_run/Simulation/connectivity_global_fast.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_test_run/Simulation/connectivity_global_fast.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_test_generate/connectivity_global_fast.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_test_generate/Simulation/initial_configuration.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_test_generate/Simulation/connectivity_global_fastSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_test_generate/Simulation/connectivity_global_fast.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_test_generate/Simulation/connectivity_global_fast.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_python_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_python_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_python_test_run/connectivity_global_fast_python.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_python_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_python_test_run/Simulation/connectivity_global_fast_python_steppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_python_test_run/Simulation/connectivity_global_fast_python.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_python_test_run/Simulation/connectivity_global_fast_python.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_python_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_python_test_generate/connectivity_global_fast_python.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_python_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_python_test_generate/Simulation/connectivity_global_fast_python_steppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_python_test_generate/Simulation/connectivity_global_fast_python.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_global_fast_python_test_generate/Simulation/connectivity_global_fast_python.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_elongation_fast_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_elongation_fast_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_elongation_fast_test_run/connectivity_elongation_fast.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_elongation_fast_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_elongation_fast_test_run/Simulation/ConnectivityTest.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_elongation_fast_test_run/Simulation/ConnectivityElongationSteppable.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_elongation_fast_test_run/Simulation/ConnectivityElongation.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_elongation_fast_test_run/Simulation/ConnectivityElongation.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_elongation_fast_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_elongation_fast_test_generate/connectivity_elongation_fast.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_elongation_fast_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_elongation_fast_test_generate/Simulation/ConnectivityTest.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_elongation_fast_test_generate/Simulation/ConnectivityElongationSteppable.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_elongation_fast_test_generate/Simulation/ConnectivityElongation.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/connectivity_elongation_fast_test_generate/Simulation/ConnectivityElongation.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/chemotaxis_by_cell_id_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/chemotaxis_by_cell_id_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/chemotaxis_by_cell_id_test_run/chemotaxis_by_cell_id.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/chemotaxis_by_cell_id_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/chemotaxis_by_cell_id_test_run/Simulation/chemotaxis_by_cell_id_steppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/chemotaxis_by_cell_id_test_run/Simulation/chemotaxis_by_cell_id.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/chemotaxis_by_cell_id_test_run/Simulation/chemotaxis_by_cell_id.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/chemotaxis_by_cell_id_test_run/Simulation/chemotaxis_by_cell_id.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/chemotaxis_by_cell_id_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/chemotaxis_by_cell_id_test_generate/chemotaxis_by_cell_id.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/chemotaxis_by_cell_id_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/chemotaxis_by_cell_id_test_generate/Simulation/chemotaxis_by_cell_id_steppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/chemotaxis_by_cell_id_test_generate/Simulation/chemotaxis_by_cell_id.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/chemotaxis_by_cell_id_test_generate/Simulation/chemotaxis_by_cell_id.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/chemotaxis_by_cell_id_test_generate/Simulation/chemotaxis_by_cell_id.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/cellsort_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/cellsort_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/cellsort_test_run/cellsort_2D.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/cellsort_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/cellsort_test_run/Simulation/initial_configuration.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/cellsort_test_run/Simulation/cellsort_2DSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/cellsort_test_run/Simulation/cellsort_2D.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/cellsort_test_run/Simulation/cellsort_2D.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/cellsort_2D_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/cellsort_2D_test_generate/cellsort_2D.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/cellsort_2D_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/cellsort_2D_test_generate/Simulation/initial_configuration.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/cellsort_2D_test_generate/Simulation/cellsort_2DSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/cellsort_2D_test_generate/Simulation/cellsort_2D.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/cellsort_2D_test_generate/Simulation/cellsort_2D.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_test_run/bacterium_macrophage.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_test_run/Simulation/bacterium_macrophage_2D_wall.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_test_run/Simulation/bacterium_macrophage_2DSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_test_run/Simulation/bacterium_macrophage_2D.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_test_run/Simulation/bacterium_macrophage_2D.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_test_run/Simulation/bacterium_macrophage_2D.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_test_generate/bacterium_macrophage.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_test_generate/Simulation/bacterium_macrophage_2D_wall.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_test_generate/Simulation/bacterium_macrophage_2DSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_test_generate/Simulation/bacterium_macrophage_2D.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_test_generate/Simulation/bacterium_macrophage_2D.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_test_generate/Simulation/bacterium_macrophage_2D.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_periodic_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_periodic_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_periodic_test_run/bacterium_macrophage_periodic.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_periodic_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_periodic_test_run/Simulation/bacterium_macrophage_periodicSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_periodic_test_run/Simulation/bacterium_macrophage_periodic.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_periodic_test_run/Simulation/bacterium_macrophage_periodic.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_periodic_test_run/Simulation/bacterium_macrophage.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_periodic_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_periodic_test_generate/bacterium_macrophage_periodic.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_periodic_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_periodic_test_generate/Simulation/bacterium_macrophage_periodicSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_periodic_test_generate/Simulation/bacterium_macrophage_periodic.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_periodic_test_generate/Simulation/bacterium_macrophage_periodic.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/bacterium_macrophage_periodic_test_generate/Simulation/bacterium_macrophage.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_test_run/amoebae_2D.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_test_run/Simulation/amoebae_2D.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_test_run/Simulation/amoebae_2D.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_test_run/Simulation/amoeba_2DSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_test_run/Simulation/amoeba_2D.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_test_run/Simulation/amoebaConcentrationField_2D.txt
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_test_generate/amoebae_2D.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_test_generate/Simulation/amoebae_2D.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_test_generate/Simulation/amoebae_2D.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_test_generate/Simulation/amoeba_2DSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_test_generate/Simulation/amoeba_2D.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_test_generate/Simulation/amoebaConcentrationField_2D.txt
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_secretion_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_secretion_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_secretion_test_run/amoebae_2D_secretion.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_secretion_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_secretion_test_run/Simulation/amoebae_2D_secretionSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_secretion_test_run/Simulation/amoebae_2D_secretion.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_secretion_test_run/Simulation/amoebae_2D.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_secretion_test_run/Simulation/amoeba_2D.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_secretion_test_run/Simulation/amoebaConcentrationField_2D.txt
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_secretion_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_secretion_test_generate/amoebae_2D_secretion.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_secretion_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_secretion_test_generate/Simulation/amoebae_2D_secretionSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_secretion_test_generate/Simulation/amoebae_2D_secretion.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_secretion_test_generate/Simulation/amoebae_2D.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_secretion_test_generate/Simulation/amoeba_2D.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/amoebae_2D_secretion_test_generate/Simulation/amoebaConcentrationField_2D.txt
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/PolarizationOrientationExample_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/PolarizationOrientationExample_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/PolarizationOrientationExample_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/PolarizationOrientationExample_test_run/Simulation/PolarizationOrientationExampleSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/PolarizationOrientationExample_test_run/Simulation/PolarizationOrientationExample.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/PolarizationOrientationExample_test_run/Simulation/PolarizationOrientationExample.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/PolarizationOrientationExample_test_run/PolarizationOrientationExample.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/PolarizationOrientationExample_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/PolarizationOrientationExample_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/PolarizationOrientationExample_test_generate/Simulation/PolarizationOrientationExampleSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/PolarizationOrientationExample_test_generate/Simulation/PolarizationOrientationExample.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/PolarizationOrientationExample_test_generate/Simulation/PolarizationOrientationExample.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/PolarizationOrientationExample_test_generate/PolarizationOrientationExample.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/OrientedGrowthDemo_test_output_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/OrientedGrowthDemo_test_output_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/OrientedGrowthDemo_test_output_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/OrientedGrowthDemo_test_output_run/Simulation/OrientedGrowthDemoSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/OrientedGrowthDemo_test_output_run/Simulation/OrientedGrowthDemo.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/OrientedGrowthDemo_test_output_run/Simulation/OrientedGrowthDemo.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/OrientedGrowthDemo_test_output_run/OrientedGrowthDemo.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/OrientedGrowthDemo_test_output_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/OrientedGrowthDemo_test_output_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/OrientedGrowthDemo_test_output_generate/Simulation/OrientedGrowthDemoSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/OrientedGrowthDemo_test_output_generate/Simulation/OrientedGrowthDemo.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/OrientedGrowthDemo_test_output_generate/Simulation/OrientedGrowthDemo.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/OrientedGrowthDemo_test_output_generate/OrientedGrowthDemo.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticity_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticity_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticity_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticity_test_run/Simulation/FocalPointPlasticitySteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticity_test_run/Simulation/FocalPointPlasticity.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticity_test_run/Simulation/FocalPointPlasticity.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticity_test_run/Simulation/FocalPointInit.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticity_test_run/FocalPointPlasticity.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticity_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticity_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticity_test_generate/Simulation/FocalPointPlasticitySteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticity_test_generate/Simulation/FocalPointPlasticity.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticity_test_generate/Simulation/FocalPointPlasticity.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticity_test_generate/Simulation/FocalPointInit.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticity_test_generate/FocalPointPlasticity.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCustom_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCustom_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCustom_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCustom_test_run/Simulation/FocalPointPlasticityCustom.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCustom_test_run/Simulation/FocalPointPlasticityCustom.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCustom_test_run/Simulation/FocalPointPlasticityCustom.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCustom_test_run/FocalPointPlasticityCustom.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCustom_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCustom_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCustom_test_generate/Simulation/FocalPointPlasticityCustom.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCustom_test_generate/Simulation/FocalPointPlasticityCustom.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCustom_test_generate/Simulation/FocalPointPlasticityCustom.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCustom_test_generate/FocalPointPlasticityCustom.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython_test_run/Simulation/plasticityCompartments.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython_test_run/Simulation/FocalPointPlasticityCompartments.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython_test_run/Simulation/FocalPointPlasticityCompartments.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython_test_run/FocalPointPlasticityCompartmentsPython.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython_test_generate/Simulation/plasticityCompartments.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython_test_generate/Simulation/FocalPointPlasticityCompartments.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython_test_generate/Simulation/FocalPointPlasticityCompartments.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython_test_generate/FocalPointPlasticityCompartmentsPython.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython3D_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython3D_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython3D_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython3D_test_run/Simulation/plasticityCompartments3D.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython3D_test_run/Simulation/FocalPointPlasticityCompartments3D.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython3D_test_run/Simulation/FocalPointPlasticityCompartments3D.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython3D_test_run/FocalPointPlasticityCompartmentsPython3D.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython3D_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython3D_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython3D_test_generate/Simulation/plasticityCompartments3D.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython3D_test_generate/Simulation/FocalPointPlasticityCompartments3D.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython3D_test_generate/Simulation/FocalPointPlasticityCompartments3D.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityCompartmentsPython3D_test_generate/FocalPointPlasticityCompartmentsPython3D.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityAnchorsPython_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityAnchorsPython_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityAnchorsPython_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityAnchorsPython_test_run/Simulation/FocalPointPlasticityAnchorsSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityAnchorsPython_test_run/Simulation/FocalPointPlasticityAnchors.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityAnchorsPython_test_run/Simulation/FocalPointPlasticityAnchors.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityAnchorsPython_test_run/Simulation/FocalPointInit.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityAnchorsPython_test_run/FocalPointPlasticityAnchorsPython.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityAnchorsPython_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityAnchorsPython_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityAnchorsPython_test_generate/Simulation/FocalPointPlasticityAnchorsSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityAnchorsPython_test_generate/Simulation/FocalPointPlasticityAnchors.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityAnchorsPython_test_generate/Simulation/FocalPointPlasticityAnchors.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityAnchorsPython_test_generate/Simulation/FocalPointInit.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/FocalPointPlasticityAnchorsPython_test_generate/FocalPointPlasticityAnchorsPython.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ExternalPotential_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ExternalPotential_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ExternalPotential_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ExternalPotential_test_run/Simulation/FocalPointPlasticity.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ExternalPotential_test_run/Simulation/FocalPointPlasticity.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ExternalPotential_test_run/Simulation/FocalPointInit.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ExternalPotential_test_run/FocalPointPlasticity.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ExternalPotential_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ExternalPotential_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ExternalPotential_test_generate/Simulation/FocalPointPlasticity.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ExternalPotential_test_generate/Simulation/FocalPointPlasticity.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ExternalPotential_test_generate/Simulation/FocalPointInit.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ExternalPotential_test_generate/FocalPointPlasticity.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/Curvature_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/Curvature_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/Curvature_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/Curvature_test_run/Simulation/curvature.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/Curvature_test_run/Simulation/Curvature.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/Curvature_test_run/Simulation/Curvature.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/Curvature_test_run/Curvature.cc3d_linux_check
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/Curvature_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/Curvature_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/Curvature_test_generate/Simulation/curvature.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/Curvature_test_generate/Simulation/Curvature.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/Curvature_test_generate/Simulation/Curvature.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/Curvature_test_generate/Curvature.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ConvergentExtension_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ConvergentExtension_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ConvergentExtension_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ConvergentExtension_test_run/Simulation/ConvergentExtension.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ConvergentExtension_test_run/Simulation/ConvergentExtension.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ConvergentExtension_test_run/ConvergentExtension.cc3d_check_m1
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ConvergentExtension_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ConvergentExtension_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ConvergentExtension_test_generate/Simulation/ConvergentExtension.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ConvergentExtension_test_generate/Simulation/ConvergentExtension.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ConvergentExtension_test_generate/ConvergentExtension.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactMultiCad_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactMultiCad_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactMultiCad_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactMultiCad_test_run/Simulation/initial_configuration.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactMultiCad_test_run/Simulation/ContactMultiCadSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactMultiCad_test_run/Simulation/ContactMultiCad.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactMultiCad_test_run/Simulation/ContactMultiCad.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactMultiCad_test_run/ContactMultiCad.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactMultiCad_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactMultiCad_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactMultiCad_test_generate/Simulation/initial_configuration.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactMultiCad_test_generate/Simulation/ContactMultiCadSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactMultiCad_test_generate/Simulation/ContactMultiCad.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactMultiCad_test_generate/Simulation/ContactMultiCad.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactMultiCad_test_generate/ContactMultiCad.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExample_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExample_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExample_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExample_test_run/Simulation/initial_configuration.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExample_test_run/Simulation/ContactLocalProductExampleModules.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExample_test_run/Simulation/ContactLocalProductExample.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExample_test_run/Simulation/ContactLocalProductExample.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExample_test_run/ContactLocalProductExample.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExample_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExample_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExample_test_generate/Simulation/initial_configuration.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExample_test_generate/Simulation/ContactLocalProductExampleModules.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExample_test_generate/Simulation/ContactLocalProductExample.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExample_test_generate/Simulation/ContactLocalProductExample.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExample_test_generate/ContactLocalProductExample.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExampleCustomFunction_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExampleCustomFunction_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExampleCustomFunction_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExampleCustomFunction_test_run/Simulation/initial_configuration.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExampleCustomFunction_test_run/Simulation/ContactLocalProductExampleModules.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExampleCustomFunction_test_run/Simulation/ContactLocalProductExampleCustomFunction.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExampleCustomFunction_test_run/Simulation/ContactLocalProductExampleCustomFunction.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExampleCustomFunction_test_run/ContactLocalProductExampleCustomFunction.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExampleCustomFunction_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExampleCustomFunction_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExampleCustomFunction_test_generate/Simulation/initial_configuration.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExampleCustomFunction_test_generate/Simulation/ContactLocalProductExampleModules.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExampleCustomFunction_test_generate/Simulation/ContactLocalProductExampleCustomFunction.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExampleCustomFunction_test_generate/Simulation/ContactLocalProductExampleCustomFunction.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ContactLocalProductExampleCustomFunction_test_generate/ContactLocalProductExampleCustomFunction.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExample_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExample_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExample_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExample_test_run/Simulation/CompartmentExampleSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExample_test_run/Simulation/CompartmentExample.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExample_test_run/Simulation/CompartmentExample.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExample_test_run/Simulation/3D_LINE_BASE.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExample_test_run/CompartmentExample.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExample_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExample_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExample_test_generate/Simulation/CompartmentExampleSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExample_test_generate/Simulation/CompartmentExample.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExample_test_generate/Simulation/CompartmentExample.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExample_test_generate/Simulation/3D_LINE_BASE.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExample_test_generate/CompartmentExample.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExampleNewStyle_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExampleNewStyle_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExampleNewStyle_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExampleNewStyle_test_run/Simulation/CompartmentExampleNewStyleSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExampleNewStyle_test_run/Simulation/CompartmentExampleNewStyle.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExampleNewStyle_test_run/Simulation/CompartmentExampleNewStyle.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExampleNewStyle_test_run/Simulation/3D_LINE_BASE.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExampleNewStyle_test_run/CompartmentExampleNewStyle.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExampleNewStyle_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExampleNewStyle_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExampleNewStyle_test_generate/Simulation/CompartmentExampleNewStyleSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExampleNewStyle_test_generate/Simulation/CompartmentExampleNewStyle.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExampleNewStyle_test_generate/Simulation/CompartmentExampleNewStyle.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExampleNewStyle_test_generate/Simulation/3D_LINE_BASE.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/CompartmentExampleNewStyle_test_generate/CompartmentExampleNewStyle.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ChemotaxisCompartment_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ChemotaxisCompartment_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ChemotaxisCompartment_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ChemotaxisCompartment_test_run/Simulation/ChemotaxisCompartmentSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ChemotaxisCompartment_test_run/Simulation/ChemotaxisCompartment.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ChemotaxisCompartment_test_run/Simulation/ChemotaxisCompartment.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ChemotaxisCompartment_test_run/ChemotaxisCompartment.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ChemotaxisCompartment_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ChemotaxisCompartment_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ChemotaxisCompartment_test_generate/Simulation/ChemotaxisCompartmentSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ChemotaxisCompartment_test_generate/Simulation/ChemotaxisCompartment.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ChemotaxisCompartment_test_generate/Simulation/ChemotaxisCompartment.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/ChemotaxisCompartment_test_generate/ChemotaxisCompartment.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexXML_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexXML_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexXML_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexXML_test_run/Simulation/initial_configuration.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexXML_test_run/Simulation/AdhesionFlex.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexXML_test_run/Simulation/AdhesionFlex.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexXML_test_run/AdhesionFlexXML.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexXML_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexXML_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexXML_test_generate/Simulation/initial_configuration.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexXML_test_generate/Simulation/AdhesionFlex.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexXML_test_generate/Simulation/AdhesionFlex.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexXML_test_generate/AdhesionFlexXML.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexPython_test_run
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexPython_test_run/potts_data_output.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexPython_test_run/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexPython_test_run/Simulation/initial_configuration.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexPython_test_run/Simulation/AdhesionFlexSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexPython_test_run/Simulation/AdhesionFlexPython.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexPython_test_run/Simulation/AdhesionFlex.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexPython_test_run/AdhesionFlexPython.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexPython_test_generate
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexPython_test_generate/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexPython_test_generate/Simulation/initial_configuration.piff
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexPython_test_generate/Simulation/AdhesionFlexSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexPython_test_generate/Simulation/AdhesionFlexPython.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexPython_test_generate/Simulation/AdhesionFlex.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/plugin_test_suite/AdhesionFlexPython_test_generate/AdhesionFlexPython.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/__init__.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/ReactionDiffusion_3D_FN
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/ReactionDiffusion_3D_FN/reference_output
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/ReactionDiffusion_3D_FN/reference_output/model.output.H.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/ReactionDiffusion_3D_FN/reference_output/model.output.F.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/ReactionDiffusion_3D_FN/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/ReactionDiffusion_3D_FN/Simulation/diffusion_testSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/ReactionDiffusion_3D_FN/Simulation/ReactionDiffusion_2D_FN.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/ReactionDiffusion_3D_FN/Simulation/ReactionDiffusion_2D_FN.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/ReactionDiffusion_3D_FN/Simulation/FN.pulse.txt
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/ReactionDiffusion_3D_FN/ReactionDiffusion_3D_FN.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/ReactionDiffusion_2D_FN
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/ReactionDiffusion_2D_FN/reference_output
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/ReactionDiffusion_2D_FN/reference_output/model.output.H.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/ReactionDiffusion_2D_FN/reference_output/model.output.F.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/ReactionDiffusion_2D_FN/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/ReactionDiffusion_2D_FN/Simulation/diffusion_testSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/ReactionDiffusion_2D_FN/Simulation/ReactionDiffusion_2D_FN.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/ReactionDiffusion_2D_FN/Simulation/ReactionDiffusion_2D_FN.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/ReactionDiffusion_2D_FN/Simulation/FN.pulse.txt
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/ReactionDiffusion_2D_FN/ReactionDiffusion_2D_FN.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr_hex_3D
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr_hex_3D/reference_output
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr_hex_3D/reference_output/model.output.FGF.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr_hex_3D/diffusion_bc_secr_hex_3d.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr_hex_3D/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr_hex_3D/Simulation/diffusion_testSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr_hex_3D/Simulation/diffusion_test.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr_hex_3D/Simulation/diffusion_test.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr_3D
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr_3D/reference_output
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr_3D/reference_output/model.output.FGF.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr_3D/diffusion_bc_secr_3d.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr_3D/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr_3D/Simulation/diffusion_testSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr_3D/Simulation/diffusion_test.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr_3D/Simulation/diffusion_test.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr/reference_output
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr/reference_output/model.output.FGF.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr/diffusion_bc_secr.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr/Simulation/diffusion_testSteppables.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr/Simulation/diffusion_test.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_bc_secr/Simulation/diffusion_test.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_1_hex
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_1_hex/reference_output
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_1_hex/reference_output/model.output.FGF.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_1_hex/diffusion_fe_hex.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_1_hex/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_1_hex/Simulation/diffusion_steppable.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_1_hex/Simulation/diffusion_2D_scale.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_1_hex/Simulation/diffusion_2D_scale.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_1_hex/Simulation/diffusion_2D.pulse.txt
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_1
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_1/reference_output
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_1/reference_output/model.output.FGF.csv
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_1/diffusion_fe.cc3d
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_1/Simulation
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_1/Simulation/diffusion_steppable.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_1/Simulation/diffusion_2D_scale.xml
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_1/Simulation/diffusion_2D_scale.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/pde_solvers/Simulations/DiffusionSolverFE_1/Simulation/diffusion_2D.pulse.txt
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/tests/__init__.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/bin/cc3d_runScript.sh
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/bin/cc3d_paramScan.sh
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/config.py
-- Installing: /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/cmake/CompuCell3D/cc3d-config.cmake
+ popd
~/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f
+ find /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT -type f '(' -name '*.so' -o -name '*.so.*' ')' -exec chrpath --delete '{}' ';'
+ _cpp=/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp
+ '[' -d /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp ']'
+ find /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp -maxdepth 1 -name '*.so' -exec patchelf --set-rpath '$ORIGIN/CompuCell3DPlugins:$ORIGIN/CompuCell3DSteppables' '{}' ';'
+ find /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DPlugins -name '*.so*' -type f -exec patchelf --set-rpath '$ORIGIN:$ORIGIN/../CompuCell3DSteppables' '{}' ';'
+ find /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/CompuCell3DSteppables -name '*.so*' -type f -exec patchelf --set-rpath '$ORIGIN:$ORIGIN/../CompuCell3DPlugins' '{}' ';'
+ find /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT -name '*.la' -delete
+ '[' lib64 '!=' lib ']'
+ '[' -d /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib ']'
+ find /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib -maxdepth 1 -name '*.so*' -exec mv -v '{}' /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/ ';'
+ chmod 755 /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/bin/cc3d_runScript.sh /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/bin/cc3d_paramScan.sh
+ sed -i -e 's|^export PYTHON_EXEC=python$|export PYTHON_EXEC=python3|' -e 's|^export PYTHONPATH=.*$|export PYTHONPATH=/usr/lib/python3.14/site-packages|' /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/bin/cc3d_runScript.sh /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/bin/cc3d_paramScan.sh
+ rm -f /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/License.txt /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/ReleaseNotes.rst /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/License.txt /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/ReleaseNotes.rst
+ install -d /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/share/compucell3d
+ cp -a CompuCell3D/core/Demos /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/share/compucell3d/Demos
+ find /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/share/compucell3d/Demos -type f -name '*.py' -exec chmod 0644 '{}' +
+ find /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/share/compucell3d/Demos -name .gitignore -delete
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ COMPRESS='gzip -9 -n'
+ COMPRESS_EXT=.gz
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/brp-strip /usr/bin/strip
+ /usr/lib/rpm/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
*** WARNING: ./usr/share/compucell3d/Demos/ParameterScan/pscan_loop.sh is executable but has no shebang, removing executable bit
mangling shebang in /usr/bin/cc3d_paramScan.sh from /bin/sh to #!/usr/bin/sh
mangling shebang in /usr/bin/cc3d_runScript.sh from /bin/sh to #!/usr/bin/sh
+ /usr/lib/rpm/brp-remove-la-files
+ /usr/lib/rpm/redhat/brp-python-rpm-in-distinfo
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/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/__pycache__/CMLFieldHandler.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/__pycache__/CellInventoryWatcher.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/__pycache__/CC3DSimulationDataHandler.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/__pycache__/BasicSimulationData.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/__pycache__/CMLResultsReader.cpython-314.pyc: replacing with normalized version
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/__pycache__/CMLResultsReader.cpython-314.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/Configuration/__pycache__/SettingUtils.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/Configuration/__pycache__/__init__.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/Configuration/__pycache__/Configuration.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/Configuration/__pycache__/settingdict.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/__pycache__/MVCDrawModel3D.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/__pycache__/MVCDrawViewBase.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/__pycache__/MVCDrawView3D.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/__pycache__/MVCDrawView2D.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/__pycache__/__init__.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/__pycache__/primitives.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/__pycache__/Specs.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/__pycache__/MetadataHandler.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/__pycache__/MVCDrawModel2D.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/__pycache__/CustomActorsStorage.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/__pycache__/CameraSettings.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/__pycache__/DrawingParameters.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/__pycache__/GraphicsWindowData.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/__pycache__/GenericDrawer.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsOffScreen/__pycache__/MVCDrawModelBase.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/__pycache__/MovieCreator.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/__pycache__/GraphicsFrame.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/__pycache__/CC3DPyGraphicsFrameIO.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/__pycache__/utils.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/__pycache__/__init__.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/__pycache__/JupyterWidgetInterface.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/__pycache__/ScreenshotManagerCore.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/__pycache__/ScreenshotData.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/__pycache__/SceneData.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/__pycache__/JupyterGraphicsFrameWidget.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/Validation/__pycache__/sanity_checkers.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/__pycache__/JupyterControlPanel.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/Validation/__pycache__/PDESuiteTest.cpython-314.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/Validation/__pycache__/PDESuiteTest.cpython-314.pyc: replacing with normalized version
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/developer_zone/__pycache__/__init__.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/param_scan/__pycache__/__init__.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/param_scan/__pycache__/template_utils.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/developer_zone/__pycache__/developer_zone_config.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/param_scan/__pycache__/parameter_scan_run.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/simservice/__pycache__/SimulationServiceThread.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/simservice/__pycache__/PyServiceCC3D.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/param_scan/__pycache__/parameter_scan_utils.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/simservice/__pycache__/__init__.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/simservice/__pycache__/CC3DSimService.cpython-314.pyc: replacing with normalized version
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/simservice/__pycache__/CC3DSimService.cpython-314.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/__pycache__/simulation_utils.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/__pycache__/simulation_player_utils.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/GraphicsUtils/__pycache__/CC3DPyGraphicsFrame.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/__pycache__/sim_runner.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/__pycache__/utils.cpython-314.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/__pycache__/simulation_setup.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/__pycache__/readers.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/__pycache__/utils.cpython-314.pyc: replacing with normalized version
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/__pycache__/SimulationThread.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/core/__pycache__/PyCoreSpecs.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/__pycache__/CC3DRenderer.cpython-314.opt-1.pyc: replacing with normalized version
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/__pycache__/cluster_utils.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/__pycache__/__init__.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/__pycache__/CC3DCaller.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/__pycache__/CC3DRenderer.cpython-314.pyc: replacing with normalized version
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/__pycache__/CC3DPy.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/CompuCellSetup/__pycache__/persistent_globals.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/__pycache__/SerializerDEPy.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/__pycache__/CC3DXML.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/__pycache__/PlayerPython.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/__pycache__/CC3DAuxFields.cpython-314.opt-1.pyc: rewriting with normalized contents
/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib/python3.14/site-packages/cc3d/cpp/__pycache__/CompuCell.cpython-314.opt-1.pyc: rewriting with normalized contents
Scanned 891 directories and 2808 files,
    processed 244 inodes,
    244 modified (14 replaced + 230 rewritten),
    0 unsupported format, 0 errors
+ /usr/bin/linkdupes --brp /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr
Scanned 890 directories and 2808 files,
    considered 2654 files, read 1182 files, linked 272 files, 0 errors
    sum of sizes of linked files: 6745755 bytes
Reading /builddir/build/BUILD/compucell3d-4.9.0-build/SPECPARTS/rpm-debuginfo.specpart
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.zAZU5z
+ umask 022
+ cd /builddir/build/BUILD/compucell3d-4.9.0-build
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd CompuCell3D-780374e5e17145de12452aeabd224710134fa53f
+ test -f /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/lib64/libCC3DCompuCellLib.so.4.9
+ RPM_EC=0
++ jobs -p
+ exit 0
Processing files: compucell3d-4.9.0-0.1.rc.20260615git780374e.fc44.aarch64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.btY50s
+ umask 022
+ cd /builddir/build/BUILD/compucell3d-4.9.0-build
+ cd CompuCell3D-780374e5e17145de12452aeabd224710134fa53f
+ DOCDIR=/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/share/doc/compucell3d
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/share/doc/compucell3d
+ cp -pr /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/README.rst /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/share/doc/compucell3d
+ cp -pr /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/ReleaseNotes.rst /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/share/doc/compucell3d
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.7Pk5zN
+ umask 022
+ cd /builddir/build/BUILD/compucell3d-4.9.0-build
+ cd CompuCell3D-780374e5e17145de12452aeabd224710134fa53f
+ LICENSEDIR=/builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/share/licenses/compucell3d
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/share/licenses/compucell3d
+ cp -pr /builddir/build/BUILD/compucell3d-4.9.0-build/CompuCell3D-780374e5e17145de12452aeabd224710134fa53f/CompuCell3D/License.txt /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT/usr/share/licenses/compucell3d
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: bundled(eigen) = 3.1.1 bundled(muParser) compucell3d = 4.9.0-0.1.rc.20260615git780374e.fc44 compucell3d(aarch-64) = 4.9.0-0.1.rc.20260615git780374e.fc44 libCC3DAutomaton.so.4.9()(64bit) libCC3DBoundary.so.4.9()(64bit) libCC3DCompuCellLib.so.4.9()(64bit) libCC3DExpressionEvaluator.so.4.9()(64bit) libCC3DField3D.so.4.9()(64bit) libCC3DLogger.so.4.9()(64bit) libCC3DPotts3D.so.4.9()(64bit) libCC3DPublicUtilities.so.4.9()(64bit) libCC3DXMLUtils.so.4.9()(64bit) libCC3DmuParser.so.4.9()(64bit) libFieldExtractor.so.4.9()(64bit) libPyPlugin.so.4.9()(64bit) libSerializerDE.so.4.9()(64bit)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/sh ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libCC3DBoundary.so.4.9()(64bit) libCC3DCompuCellLib.so.4.9()(64bit) libCC3DExpressionEvaluator.so.4.9()(64bit) libCC3DField3D.so.4.9()(64bit) libCC3DLogger.so.4.9()(64bit) libCC3DPotts3D.so.4.9()(64bit) libCC3DPublicUtilities.so.4.9()(64bit) libCC3DXMLUtils.so.4.9()(64bit) libCC3DmuParser.so.4.9()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.27)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libgcc_s.so.1(GCC_4.2.0)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgomp.so.1(OMP_3.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libm.so.6(GLIBC_2.43)(64bit) libpython3.14.so.1.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libvtkCommonCore.so.1()(64bit) libvtkCommonDataModel.so.1()(64bit) libvtkIOCore.so.1()(64bit) libvtkIOLegacy.so.1()(64bit) libvtksys.so.1()(64bit) rtld(GNU_HASH)
Processing files: python3-compucell3d-4.9.0-0.1.rc.20260615git780374e.fc44.aarch64
Provides: libCC3DAdhesionFlex.so.4.9()(64bit) libCC3DBiasVectorSteppable.so.4.9()(64bit) libCC3DBlobFieldInitializer.so.4.9()(64bit) libCC3DBoundaryMonitor.so.4.9()(64bit) libCC3DBoundaryPixelTracker.so.4.9()(64bit) libCC3DBoxWatcher.so.4.9()(64bit) libCC3DCellOrientation.so.4.9()(64bit) libCC3DCellType.so.4.9()(64bit) libCC3DCellTypeMonitor.so.4.9()(64bit) libCC3DCenterOfMass.so.4.9()(64bit) libCC3DChemotaxis.so.4.9()(64bit) libCC3DChemotaxisSimple.so.4.9()(64bit) libCC3DClusterSurface.so.4.9()(64bit) libCC3DClusterSurfaceTracker.so.4.9()(64bit) libCC3DCompartment.so.4.9()(64bit) libCC3DConnectivity.so.4.9()(64bit) libCC3DConnectivityGlobal.so.4.9()(64bit) libCC3DConnectivityLocalFlex.so.4.9()(64bit) libCC3DContact.so.4.9()(64bit) libCC3DContactInternal.so.4.9()(64bit) libCC3DContactLocalFlex.so.4.9()(64bit) libCC3DContactLocalProduct.so.4.9()(64bit) libCC3DContactMultiCad.so.4.9()(64bit) libCC3DContactOrientation.so.4.9()(64bit) libCC3DConvergentExtension.so.4.9()(64bit) libCC3DCurvature.so.4.9()(64bit) libCC3DCurvatureCalculator.so.4.9()(64bit) libCC3DElasticity.so.4.9()(64bit) libCC3DElasticityTracker.so.4.9()(64bit) libCC3DExternalPotential.so.4.9()(64bit) libCC3DFieldManager.so.4.9()(64bit) libCC3DFoamDataOutput.so.4.9()(64bit) libCC3DFocalPointPlasticity.so.4.9()(64bit) libCC3DGlobalBoundaryPixelTracker.so.4.9()(64bit) libCC3DImplicitMotility.so.4.9()(64bit) libCC3DLengthConstraint.so.4.9()(64bit) libCC3DMitosis.so.4.9()(64bit) libCC3DMitosisSteppable.so.4.9()(64bit) libCC3DMomentOfInertia.so.4.9()(64bit) libCC3DNeighborTracker.so.4.9()(64bit) libCC3DObjInitializer.so.4.9()(64bit) libCC3DOrientedContact.so.4.9()(64bit) libCC3DOrientedGrowth.so.4.9()(64bit) libCC3DOrientedGrowth2.so.4.9()(64bit) libCC3DPDESolverCaller.so.4.9()(64bit) libCC3DPDESolvers.so.4.9()(64bit) libCC3DPIFDumper.so.4.9()(64bit) libCC3DPIFInitializer.so.4.9()(64bit) libCC3DPixelTracker.so.4.9()(64bit) libCC3DPlasticity.so.4.9()(64bit) libCC3DPlasticityTracker.so.4.9()(64bit) libCC3DPolarization23.so.4.9()(64bit) libCC3DPolarizationVector.so.4.9()(64bit) libCC3DPolygonFieldInitializer.so.4.9()(64bit) libCC3DRandomInitializers.so.4.9()(64bit) libCC3DSecretion.so.4.9()(64bit) libCC3DSurface.so.4.9()(64bit) libCC3DSurfaceTracker.so.4.9()(64bit) libCC3DTubeFieldInitializer.so.4.9()(64bit) libCC3DUniformFieldInitializer.so.4.9()(64bit) libCC3DVectorFieldPolarization.so.4.9()(64bit) libCC3DViscosity.so.4.9()(64bit) libCC3DVolume.so.4.9()(64bit) libCC3DVolumeTracker.so.4.9()(64bit) python-compucell3d = 4.9.0-0.1.rc.20260615git780374e.fc44 python3-compucell3d = 4.9.0-0.1.rc.20260615git780374e.fc44 python3-compucell3d(aarch-64) = 4.9.0-0.1.rc.20260615git780374e.fc44 python3.14-compucell3d = 4.9.0-0.1.rc.20260615git780374e.fc44
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libCC3DAdhesionFlex.so.4.9()(64bit) libCC3DAutomaton.so.4.9()(64bit) libCC3DBiasVectorSteppable.so.4.9()(64bit) libCC3DBlobFieldInitializer.so.4.9()(64bit) libCC3DBoundary.so.4.9()(64bit) libCC3DBoundaryMonitor.so.4.9()(64bit) libCC3DBoundaryPixelTracker.so.4.9()(64bit) libCC3DBoxWatcher.so.4.9()(64bit) libCC3DCellOrientation.so.4.9()(64bit) libCC3DCellType.so.4.9()(64bit) libCC3DCellTypeMonitor.so.4.9()(64bit) libCC3DCenterOfMass.so.4.9()(64bit) libCC3DChemotaxis.so.4.9()(64bit) libCC3DChemotaxisSimple.so.4.9()(64bit) libCC3DClusterSurface.so.4.9()(64bit) libCC3DClusterSurfaceTracker.so.4.9()(64bit) libCC3DCompartment.so.4.9()(64bit) libCC3DCompuCellLib.so.4.9()(64bit) libCC3DConnectivity.so.4.9()(64bit) libCC3DConnectivityGlobal.so.4.9()(64bit) libCC3DConnectivityLocalFlex.so.4.9()(64bit) libCC3DContact.so.4.9()(64bit) libCC3DContactInternal.so.4.9()(64bit) libCC3DContactLocalFlex.so.4.9()(64bit) libCC3DContactLocalProduct.so.4.9()(64bit) libCC3DContactMultiCad.so.4.9()(64bit) libCC3DContactOrientation.so.4.9()(64bit) libCC3DConvergentExtension.so.4.9()(64bit) libCC3DCurvature.so.4.9()(64bit) libCC3DCurvatureCalculator.so.4.9()(64bit) libCC3DElasticity.so.4.9()(64bit) libCC3DElasticityTracker.so.4.9()(64bit) libCC3DExpressionEvaluator.so.4.9()(64bit) libCC3DExternalPotential.so.4.9()(64bit) libCC3DField3D.so.4.9()(64bit) libCC3DFieldManager.so.4.9()(64bit) libCC3DFoamDataOutput.so.4.9()(64bit) libCC3DFocalPointPlasticity.so.4.9()(64bit) libCC3DGlobalBoundaryPixelTracker.so.4.9()(64bit) libCC3DImplicitMotility.so.4.9()(64bit) libCC3DLengthConstraint.so.4.9()(64bit) libCC3DLogger.so.4.9()(64bit) libCC3DMitosis.so.4.9()(64bit) libCC3DMitosisSteppable.so.4.9()(64bit) libCC3DMomentOfInertia.so.4.9()(64bit) libCC3DNeighborTracker.so.4.9()(64bit) libCC3DObjInitializer.so.4.9()(64bit) libCC3DOrientedContact.so.4.9()(64bit) libCC3DOrientedGrowth.so.4.9()(64bit) libCC3DOrientedGrowth2.so.4.9()(64bit) libCC3DPDESolverCaller.so.4.9()(64bit) libCC3DPDESolvers.so.4.9()(64bit) libCC3DPIFDumper.so.4.9()(64bit) libCC3DPIFInitializer.so.4.9()(64bit) libCC3DPixelTracker.so.4.9()(64bit) libCC3DPlasticity.so.4.9()(64bit) libCC3DPlasticityTracker.so.4.9()(64bit) libCC3DPolarization23.so.4.9()(64bit) libCC3DPolarizationVector.so.4.9()(64bit) libCC3DPolygonFieldInitializer.so.4.9()(64bit) libCC3DPotts3D.so.4.9()(64bit) libCC3DPublicUtilities.so.4.9()(64bit) libCC3DRandomInitializers.so.4.9()(64bit) libCC3DSecretion.so.4.9()(64bit) libCC3DSurface.so.4.9()(64bit) libCC3DSurfaceTracker.so.4.9()(64bit) libCC3DTubeFieldInitializer.so.4.9()(64bit) libCC3DUniformFieldInitializer.so.4.9()(64bit) libCC3DVectorFieldPolarization.so.4.9()(64bit) libCC3DViscosity.so.4.9()(64bit) libCC3DVolume.so.4.9()(64bit) libCC3DVolumeTracker.so.4.9()(64bit) libCC3DXMLUtils.so.4.9()(64bit) libCC3DmuParser.so.4.9()(64bit) libFieldExtractor.so.4.9()(64bit) libPyPlugin.so.4.9()(64bit) libSerializerDE.so.4.9()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.27)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libm.so.6(GLIBC_2.43)(64bit) libpython3.14.so.1.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libvtkCommonCore.so.1()(64bit) libvtksys.so.1()(64bit) python(abi) = 3.14 rtld(GNU_HASH)
Recommends: python3-webcolors
Processing files: compucell3d-devel-4.9.0-0.1.rc.20260615git780374e.fc44.aarch64
Provides: cmake(cc3d) cmake(cc3d-Automaton) cmake(cc3d-Boundary) cmake(cc3d-CompuCellLib) cmake(cc3d-ExpressionEvaluator) cmake(cc3d-Field3D) cmake(cc3d-FieldExtractor) cmake(cc3d-Logger) cmake(cc3d-Potts3D) cmake(cc3d-PublicUtilities) cmake(cc3d-PyPlugin) cmake(cc3d-SerializerDE) cmake(cc3d-XMLUtils) cmake(cc3d-automaton) cmake(cc3d-boundary) cmake(cc3d-compucelllib) cmake(cc3d-expressionevaluator) cmake(cc3d-field3d) cmake(cc3d-fieldextractor) cmake(cc3d-logger) cmake(cc3d-muParser) cmake(cc3d-muparser) cmake(cc3d-plugin-AdhesionFlex) cmake(cc3d-plugin-BoundaryMonitor) cmake(cc3d-plugin-BoundaryPixelTracker) cmake(cc3d-plugin-CellOrientation) cmake(cc3d-plugin-CellType) cmake(cc3d-plugin-CellTypeMonitor) cmake(cc3d-plugin-CenterOfMass) cmake(cc3d-plugin-Chemotaxis) cmake(cc3d-plugin-ChemotaxisSimple) cmake(cc3d-plugin-ClusterSurface) cmake(cc3d-plugin-ClusterSurfaceTracker) cmake(cc3d-plugin-Compartment) cmake(cc3d-plugin-Connectivity) cmake(cc3d-plugin-ConnectivityGlobal) cmake(cc3d-plugin-ConnectivityLocalFlex) cmake(cc3d-plugin-Contact) cmake(cc3d-plugin-ContactInternal) cmake(cc3d-plugin-ContactLocalFlex) cmake(cc3d-plugin-ContactLocalProduct) cmake(cc3d-plugin-ContactMultiCad) cmake(cc3d-plugin-ContactOrientation) cmake(cc3d-plugin-ConvergentExtension) cmake(cc3d-plugin-Curvature) cmake(cc3d-plugin-CurvatureCalculator) cmake(cc3d-plugin-Elasticity) cmake(cc3d-plugin-ElasticityTracker) cmake(cc3d-plugin-ExternalPotential) cmake(cc3d-plugin-FocalPointPlasticity) cmake(cc3d-plugin-GlobalBoundaryPixelTracker) cmake(cc3d-plugin-ImplicitMotility) cmake(cc3d-plugin-LengthConstraint) cmake(cc3d-plugin-Mitosis) cmake(cc3d-plugin-MomentOfInertia) cmake(cc3d-plugin-NeighborTracker) cmake(cc3d-plugin-OrientedContact) cmake(cc3d-plugin-OrientedGrowth) cmake(cc3d-plugin-OrientedGrowth2) cmake(cc3d-plugin-PDESolverCaller) cmake(cc3d-plugin-PixelTracker) cmake(cc3d-plugin-Plasticity) cmake(cc3d-plugin-PlasticityTracker) cmake(cc3d-plugin-Polarization23) cmake(cc3d-plugin-PolarizationVector) cmake(cc3d-plugin-Secretion) cmake(cc3d-plugin-Surface) cmake(cc3d-plugin-SurfaceTracker) cmake(cc3d-plugin-VectorFieldPolarization) cmake(cc3d-plugin-Viscosity) cmake(cc3d-plugin-Volume) cmake(cc3d-plugin-VolumeTracker) cmake(cc3d-plugin-adhesionflex) cmake(cc3d-plugin-boundarymonitor) cmake(cc3d-plugin-boundarypixeltracker) cmake(cc3d-plugin-cellorientation) cmake(cc3d-plugin-celltype) cmake(cc3d-plugin-celltypemonitor) cmake(cc3d-plugin-centerofmass) cmake(cc3d-plugin-chemotaxis) cmake(cc3d-plugin-chemotaxissimple) cmake(cc3d-plugin-clustersurface) cmake(cc3d-plugin-clustersurfacetracker) cmake(cc3d-plugin-compartment) cmake(cc3d-plugin-connectivity) cmake(cc3d-plugin-connectivityglobal) cmake(cc3d-plugin-connectivitylocalflex) cmake(cc3d-plugin-contact) cmake(cc3d-plugin-contactinternal) cmake(cc3d-plugin-contactlocalflex) cmake(cc3d-plugin-contactlocalproduct) cmake(cc3d-plugin-contactmulticad) cmake(cc3d-plugin-contactorientation) cmake(cc3d-plugin-convergentextension) cmake(cc3d-plugin-curvature) cmake(cc3d-plugin-curvaturecalculator) cmake(cc3d-plugin-elasticity) cmake(cc3d-plugin-elasticitytracker) cmake(cc3d-plugin-externalpotential) cmake(cc3d-plugin-focalpointplasticity) cmake(cc3d-plugin-globalboundarypixeltracker) cmake(cc3d-plugin-implicitmotility) cmake(cc3d-plugin-lengthconstraint) cmake(cc3d-plugin-mitosis) cmake(cc3d-plugin-momentofinertia) cmake(cc3d-plugin-neighbortracker) cmake(cc3d-plugin-orientedcontact) cmake(cc3d-plugin-orientedgrowth) cmake(cc3d-plugin-orientedgrowth2) cmake(cc3d-plugin-pdesolvercaller) cmake(cc3d-plugin-pixeltracker) cmake(cc3d-plugin-plasticity) cmake(cc3d-plugin-plasticitytracker) cmake(cc3d-plugin-polarization23) cmake(cc3d-plugin-polarizationvector) cmake(cc3d-plugin-secretion) cmake(cc3d-plugin-surface) cmake(cc3d-plugin-surfacetracker) cmake(cc3d-plugin-vectorfieldpolarization) cmake(cc3d-plugin-viscosity) cmake(cc3d-plugin-volume) cmake(cc3d-plugin-volumetracker) cmake(cc3d-potts3d) cmake(cc3d-publicutilities) cmake(cc3d-pyplugin) cmake(cc3d-serializerde) cmake(cc3d-steppable-BiasVectorSteppable) cmake(cc3d-steppable-BlobFieldInitializer) cmake(cc3d-steppable-BoxWatcher) cmake(cc3d-steppable-FieldManager) cmake(cc3d-steppable-FoamDataOutput) cmake(cc3d-steppable-MitosisSteppable) cmake(cc3d-steppable-ObjInitializer) cmake(cc3d-steppable-PDESolvers) cmake(cc3d-steppable-PIFDumper) cmake(cc3d-steppable-PIFInitializer) cmake(cc3d-steppable-PolygonFieldInitializer) cmake(cc3d-steppable-RandomInitializers) cmake(cc3d-steppable-TubeFieldInitializer) cmake(cc3d-steppable-UniformFieldInitializer) cmake(cc3d-steppable-biasvectorsteppable) cmake(cc3d-steppable-blobfieldinitializer) cmake(cc3d-steppable-boxwatcher) cmake(cc3d-steppable-fieldmanager) cmake(cc3d-steppable-foamdataoutput) cmake(cc3d-steppable-mitosissteppable) cmake(cc3d-steppable-objinitializer) cmake(cc3d-steppable-pdesolvers) cmake(cc3d-steppable-pifdumper) cmake(cc3d-steppable-pifinitializer) cmake(cc3d-steppable-polygonfieldinitializer) cmake(cc3d-steppable-randominitializers) cmake(cc3d-steppable-tubefieldinitializer) cmake(cc3d-steppable-uniformfieldinitializer) cmake(cc3d-xmlutils) compucell3d-devel = 4.9.0-0.1.rc.20260615git780374e.fc44 compucell3d-devel(aarch-64) = 4.9.0-0.1.rc.20260615git780374e.fc44
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: cmake-filesystem(aarch-64) libCC3DAutomaton.so.4.9()(64bit) libCC3DBoundary.so.4.9()(64bit) libCC3DCompuCellLib.so.4.9()(64bit) libCC3DExpressionEvaluator.so.4.9()(64bit) libCC3DField3D.so.4.9()(64bit) libCC3DLogger.so.4.9()(64bit) libCC3DPotts3D.so.4.9()(64bit) libCC3DPublicUtilities.so.4.9()(64bit) libCC3DXMLUtils.so.4.9()(64bit) libCC3DmuParser.so.4.9()(64bit) libFieldExtractor.so.4.9()(64bit) libPyPlugin.so.4.9()(64bit) libSerializerDE.so.4.9()(64bit)
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/compucell3d-4.9.0-build/BUILDROOT
Wrote: /builddir/build/RPMS/compucell3d-devel-4.9.0-0.1.rc.20260615git780374e.fc44.aarch64.rpm
Wrote: /builddir/build/RPMS/compucell3d-4.9.0-0.1.rc.20260615git780374e.fc44.aarch64.rpm
Wrote: /builddir/build/RPMS/python3-compucell3d-4.9.0-0.1.rc.20260615git780374e.fc44.aarch64.rpm
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.WZAG6e
+ umask 022
+ cd /builddir/build/BUILD/compucell3d-4.9.0-build
+ test -d /builddir/build/BUILD/compucell3d-4.9.0-build
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/compucell3d-4.9.0-build
+ rm -rf /builddir/build/BUILD/compucell3d-4.9.0-build
+ RPM_EC=0
++ jobs -p
+ exit 0
Finish: rpmbuild compucell3d-4.9.0-0.1.rc.20260615git780374e.fc44.src.rpm
Finish: build phase for compucell3d-4.9.0-0.1.rc.20260615git780374e.fc44.src.rpm
INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-44-aarch64-1781709347.325201/root/var/log/dnf5.log
INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz
/bin/tar: Removing leading `/' from member names
INFO: Done(/var/lib/copr-rpmbuild/results/compucell3d-4.9.0-0.1.rc.20260615git780374e.fc44.src.rpm) Config(child) 7 minutes 41 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running RPMResults tool
Package info:
{
    "packages": [
        {
            "name": "compucell3d",
            "epoch": null,
            "version": "4.9.0",
            "release": "0.1.rc.20260615git780374e.fc44",
            "arch": "aarch64"
        },
        {
            "name": "compucell3d-devel",
            "epoch": null,
            "version": "4.9.0",
            "release": "0.1.rc.20260615git780374e.fc44",
            "arch": "aarch64"
        },
        {
            "name": "compucell3d",
            "epoch": null,
            "version": "4.9.0",
            "release": "0.1.rc.20260615git780374e.fc44",
            "arch": "src"
        },
        {
            "name": "python3-compucell3d",
            "epoch": null,
            "version": "4.9.0",
            "release": "0.1.rc.20260615git780374e.fc44",
            "arch": "aarch64"
        }
    ]
}
RPMResults finished