Warning: Permanently added '3.91.160.47' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/11031718-fedora-44-aarch64 --chroot fedora-44-aarch64 Version: 1.10 PID: 12910 Logging PID: 12912 Task: {'allow_user_ssh': False, 'appstream': False, 'background': False, 'build_id': 11031718, 'buildroot_pkgs': [], 'chroot': 'fedora-44-aarch64', 'enable_net': False, 'fedora_review': False, 'git_hash': 'be8a75149935cc4424e6a5efe39024d1fc5821cb', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/mhough/neurofedora/conglomerate', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'conglomerate', 'package_version': '1.6.80-1.20120308git166303d', 'project_dirname': 'neurofedora', 'project_name': 'neurofedora', 'project_owner': 'mhough', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/mhough/neurofedora/fedora-44-aarch64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None, 'repo_gpgcheck': False}], 'sandbox': 'mhough/neurofedora--mhough', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': 0, 'submitter': 'mhough', 'tags': [], 'task_id': '11031718-fedora-44-aarch64', 'timeout': 86400, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/mhough/neurofedora/conglomerate /var/lib/copr-rpmbuild/workspace/workdir-_5ry6yup/conglomerate --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/mhough/neurofedora/conglomerate', '/var/lib/copr-rpmbuild/workspace/workdir-_5ry6yup/conglomerate', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-_5ry6yup/conglomerate'... Running: git checkout be8a75149935cc4424e6a5efe39024d1fc5821cb -- cmd: ['git', 'checkout', 'be8a75149935cc4424e6a5efe39024d1fc5821cb', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-_5ry6yup/conglomerate rc: 0 stdout: stderr: Note: switching to 'be8a75149935cc4424e6a5efe39024d1fc5821cb'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at be8a751 automatic import of conglomerate Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] tail: /var/lib/copr-rpmbuild/main.log: file truncated cwd: /var/lib/copr-rpmbuild/workspace/workdir-_5ry6yup/conglomerate rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading conglomerate-166303d.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -H 'Accept-Encoding: identity' -o conglomerate-166303d.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/mhough/neurofedora/conglomerate/conglomerate-166303d.tar.gz/md5/c98960361683829b3f6ca53f3fdd19ae/conglomerate-166303d.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 452.6k 100 452.6k 0 0 24.66M 0 0 INFO: Reading stdout from command: md5sum conglomerate-166303d.tar.gz INFO: Downloading mni-acmacros.tar.gz INFO: Calling: curl -H Pragma: -H 'Accept-Encoding: identity' -o mni-acmacros.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/mhough/neurofedora/conglomerate/mni-acmacros.tar.gz/md5/319aef208dbf53a6eeede74b258d993d/mni-acmacros.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 12464 100 12464 0 0 1.05M 0 0 INFO: Reading stdout from command: md5sum mni-acmacros.tar.gz Running (timeout=86400): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-_5ry6yup/conglomerate/conglomerate.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-_5ry6yup/conglomerate --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1790274075.642985 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 6.8 starting (python version = 3.14.5, NVR = mock-6.8-1.fc44), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-_5ry6yup/conglomerate/conglomerate.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-_5ry6yup/conglomerate --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1790274075.642985 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-_5ry6yup/conglomerate/conglomerate.spec) Config(fedora-44-aarch64) Start: clean chroot Finish: clean chroot Mock Version: 6.8 INFO: Mock Version: 6.8 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-44-aarch64-bootstrap-1790274075.642985/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using container image: registry.fedoraproject.org/fedora:44 INFO: Pulling image: registry.fedoraproject.org/fedora:44 INFO: Tagging container image as mock-bootstrap-3ce3a392-8333-4188-b78d-bc1d2b8311e8 INFO: Checking that 4bbf50f22724885d221f30556cebf3c8496e66be074f99d9d897f1fafbf34338 image matches host's architecture INFO: Copy content of container 4bbf50f22724885d221f30556cebf3c8496e66be074f99d9d897f1fafbf34338 to /var/lib/mock/fedora-44-aarch64-bootstrap-1790274075.642985/root INFO: mounting 4bbf50f22724885d221f30556cebf3c8496e66be074f99d9d897f1fafbf34338 with podman image mount INFO: image 4bbf50f22724885d221f30556cebf3c8496e66be074f99d9d897f1fafbf34338 as /var/lib/containers/storage/overlay/7dc1fb361d845657bff0d76035eb4487798017fd958bc4de5dd3f2fa43a87a9a/merged INFO: umounting image 4bbf50f22724885d221f30556cebf3c8496e66be074f99d9d897f1fafbf34338 (/var/lib/containers/storage/overlay/7dc1fb361d845657bff0d76035eb4487798017fd958bc4de5dd3f2fa43a87a9a/merged) with podman image umount INFO: Removing image mock-bootstrap-3ce3a392-8333-4188-b78d-bc1d2b8311e8 INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-44-aarch64-1790274075.642985/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-6.0.2-1.fc44.aarch64 rpm-sequoia-1.10.3-1.fc44.aarch64 dnf5-5.4.5.0-1.fc44.aarch64 dnf5-plugins-5.4.5.0-1.fc44.aarch64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: updates 100% | 16.7 MiB/s | 11.6 MiB | 00m01s Copr repository 100% | 1.0 MiB/s | 604.0 KiB | 00m01s fedora 100% | 31.2 MiB/s | 35.5 MiB | 00m01s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash aarch64 0:5.3.9-3.fc44 fedora 8.4 MiB bzip2 aarch64 0:1.0.8-23.fc44 fedora 171.1 KiB coreutils aarch64 0:9.10-5.fc44 updates 8.2 MiB cpio aarch64 0:2.15-9.fc44 fedora 1.1 MiB diffutils aarch64 0:3.12-5.fc44 fedora 1.6 MiB fedora-release-common noarch 0:44-18 updates 20.6 KiB findutils aarch64 1:4.10.0-7.fc44 fedora 1.9 MiB gawk aarch64 0:5.3.2-3.fc44 fedora 2.6 MiB glibc-minimal-langpack aarch64 0:2.43-8.fc44 updates 0.0 B grep aarch64 0:3.12-3.fc44 fedora 1.0 MiB gzip aarch64 0:1.14-2.fc44 fedora 437.5 KiB info aarch64 0:7.2-9.fc44 fedora 421.5 KiB patch aarch64 0:2.8-4.fc44 fedora 262.4 KiB redhat-rpm-config noarch 0:344-2.fc44 updates 183.7 KiB rpm-build aarch64 0:6.0.2-1.fc44 updates 598.7 KiB sed aarch64 0:4.9-7.fc44 fedora 873.1 KiB shadow-utils aarch64 2:4.19.0-7.fc44 updates 4.4 MiB tar aarch64 2:1.35-9.fc44 updates 3.0 MiB unzip aarch64 0:6.0-69.fc44 fedora 533.8 KiB util-linux aarch64 0:2.41.5-1.fc44 updates 6.8 MiB which aarch64 0:2.25-1.fc44 updates 123.6 KiB xz aarch64 1:5.8.2-2.fc44 fedora 1.4 MiB Installing dependencies: R-srpm-macros noarch 0:1.3.7-2.fc44 updates 3.5 KiB add-determinism aarch64 0:0.7.3-2.fc44 updates 2.0 MiB alternatives aarch64 0:1.33-5.fc44 fedora 90.1 KiB ansible-srpm-macros noarch 0:1-20.1.fc44 fedora 35.7 KiB audit-libs aarch64 0:4.2.1-1.fc44 updates 486.7 KiB binutils aarch64 0:2.46.1-1.fc44 updates 31.5 MiB build-reproducibility-srpm-macros noarch 0:0.7.3-2.fc44 updates 1.2 KiB bzip2-libs aarch64 0:1.0.8-23.fc44 fedora 72.5 KiB ca-certificates noarch 0:2026.2.90_v9.0.317-1.fc44 updates 2.7 MiB cmake-srpm-macros noarch 0:4.3.0-1.fc44 fedora 524.0 B coreutils-common aarch64 0:9.10-5.fc44 updates 10.7 MiB crypto-policies noarch 0:20251128-3.git19878fe.fc44 fedora 132.6 KiB curl aarch64 0:8.18.0-10.fc44 updates 464.2 KiB cyrus-sasl-lib aarch64 0:2.1.28-35.fc44 fedora 2.4 MiB debugedit aarch64 0:5.3-2.fc44 updates 320.9 KiB dwz aarch64 0:0.16-3.fc44 fedora 322.4 KiB ed aarch64 0:1.22.5-2.fc44 fedora 157.8 KiB efi-srpm-macros noarch 0:6-6.fc44 fedora 40.2 KiB elfutils aarch64 0:0.196-1.fc44 updates 3.8 MiB elfutils-debuginfod-client aarch64 0:0.196-1.fc44 updates 144.0 KiB elfutils-default-yama-scope noarch 0:0.196-1.fc44 updates 1.8 KiB elfutils-libelf aarch64 0:0.196-1.fc44 updates 1.5 MiB elfutils-libs aarch64 0:0.196-1.fc44 updates 746.6 KiB erlang-srpm-macros noarch 0:0.3.11-1.fc44 fedora 1.9 KiB fedora-gpg-keys noarch 0:44-2 updates 257.6 KiB fedora-release noarch 0:44-18 updates 0.0 B fedora-release-identity-basic noarch 0:44-18 updates 629.0 B fedora-repos noarch 0:44-2 updates 4.9 KiB file aarch64 0:5.46-10.fc44 updates 140.1 KiB file-libs aarch64 0:5.46-10.fc44 updates 11.9 MiB filesystem aarch64 0:3.18-52.fc44 fedora 112.0 B filesystem-srpm-macros noarch 0:3.18-52.fc44 fedora 38.2 KiB fonts-srpm-macros noarch 1:5.0.0-2.fc44 fedora 55.8 KiB forge-srpm-macros noarch 0:0.4.0-4.fc44 fedora 38.9 KiB fpc-srpm-macros noarch 0:1.3-16.fc44 fedora 144.0 B gap-srpm-macros noarch 0:2-2.fc44 fedora 2.1 KiB gdb-minimal aarch64 0:17.2-2.fc44 updates 13.5 MiB gdbm-libs aarch64 1:1.23-11.fc44 fedora 233.7 KiB ghc-srpm-macros noarch 0:1.10-1.fc44 fedora 792.0 B glibc aarch64 0:2.43-8.fc44 updates 6.4 MiB glibc-common aarch64 0:2.43-8.fc44 updates 1.3 MiB glibc-gconv-extra aarch64 0:2.43-8.fc44 updates 18.5 MiB gmp aarch64 1:6.3.0-5.fc44 fedora 657.9 KiB gnat-srpm-macros noarch 0:7-2.fc44 fedora 1.0 KiB gnome-srpm-macros noarch 0:1.0-1.fc44 updates 3.5 KiB gnulib-l10n noarch 0:20241231-2.fc44 fedora 655.0 KiB gnupg2 aarch64 0:2.4.9-16.fc44 updates 6.4 MiB gnupg2-dirmngr aarch64 0:2.4.9-16.fc44 updates 646.1 KiB gnupg2-gpg-agent aarch64 0:2.4.9-16.fc44 updates 846.9 KiB gnupg2-gpgconf aarch64 0:2.4.9-16.fc44 updates 321.8 KiB gnupg2-keyboxd aarch64 0:2.4.9-16.fc44 updates 233.3 KiB gnupg2-verify aarch64 0:2.4.9-16.fc44 updates 364.3 KiB gnutls aarch64 0:3.8.13-1.fc44 updates 3.7 MiB go-srpm-macros noarch 0:3.8.0-2.fc44 fedora 61.9 KiB gpgverify noarch 0:2.2-4.fc44 fedora 8.7 KiB ima-evm-utils-libs aarch64 0:1.6.2-8.fc44 fedora 92.6 KiB jansson aarch64 0:2.14-4.fc44 fedora 93.0 KiB java-srpm-macros noarch 0:1-8.fc44 fedora 870.0 B json-c aarch64 0:0.18-8.fc44 fedora 138.5 KiB kernel-srpm-macros noarch 0:1.0-28.fc44 fedora 1.9 KiB keyutils-libs aarch64 0:1.6.3-7.fc44 fedora 98.2 KiB krb5-libs aarch64 0:1.22.2-4.fc44 updates 2.5 MiB libacl aarch64 0:2.4.0-1.fc44 updates 67.9 KiB libarchive aarch64 0:3.8.7-1.fc44 updates 975.5 KiB libassuan aarch64 0:2.5.7-5.fc44 fedora 215.8 KiB libattr aarch64 0:2.6.0-1.fc44 updates 68.4 KiB libblkid aarch64 0:2.41.5-1.fc44 updates 290.4 KiB libbrotli aarch64 0:1.2.0-3.fc44 fedora 909.1 KiB libcap aarch64 0:2.78-1.fc44 updates 508.4 KiB libcap-ng aarch64 0:0.9.6-1.fc44 updates 160.9 KiB libcbor aarch64 0:0.13.0-2.fc44 fedora 139.5 KiB libcom_err aarch64 0:1.47.3-4.fc44 fedora 111.0 KiB libcurl aarch64 0:8.18.0-10.fc44 updates 980.8 KiB libeconf aarch64 0:0.7.9-3.fc44 fedora 80.8 KiB libevent aarch64 0:2.1.13-1.fc44 updates 1.1 MiB libfdisk aarch64 0:2.41.5-1.fc44 updates 418.8 KiB libffi aarch64 0:3.5.2-2.fc44 fedora 155.7 KiB libfido2 aarch64 0:1.16.0-5.fc44 fedora 278.6 KiB libfsverity aarch64 0:1.6-4.fc44 fedora 68.4 KiB libgcc aarch64 0:16.2.1-2.fc44 updates 222.3 KiB libgcrypt aarch64 0:1.12.2-1.fc44 updates 1.2 MiB libgomp aarch64 0:16.2.1-2.fc44 updates 592.9 KiB libgpg-error aarch64 0:1.58-2.fc44 fedora 989.6 KiB libidn2 aarch64 0:2.3.8-3.fc44 fedora 560.4 KiB libksba aarch64 0:1.6.7-5.fc44 fedora 398.3 KiB liblastlog2 aarch64 0:2.41.5-1.fc44 updates 137.8 KiB libmount aarch64 0:2.41.5-1.fc44 updates 420.2 KiB libnghttp2 aarch64 0:1.68.0-5.fc44 updates 197.9 KiB libnghttp3 aarch64 0:1.18.0-1.fc44 updates 206.8 KiB libpfm aarch64 0:4.13.0-20.fc44 updates 251.9 KiB libpkgconf aarch64 0:2.5.1-1.fc44 fedora 134.1 KiB libpsl aarch64 0:0.21.5-7.fc44 fedora 132.3 KiB libselinux aarch64 0:3.11-2.fc44 updates 265.2 KiB libselinux-utils aarch64 0:3.11-2.fc44 updates 1.3 MiB libsemanage aarch64 0:3.11-1.fc44 updates 360.1 KiB libsepol aarch64 0:3.11-1.fc44 updates 809.9 KiB libsmartcols aarch64 0:2.41.5-1.fc44 updates 224.4 KiB libssh aarch64 0:0.12.2-1.fc44 updates 721.3 KiB libssh-config noarch 0:0.12.2-1.fc44 updates 277.0 B libstdc++ aarch64 0:16.2.1-2.fc44 updates 3.0 MiB libtasn1 aarch64 0:4.21.0-1.fc44 fedora 220.7 KiB libtool-ltdl aarch64 0:2.5.4-10.fc44 fedora 93.9 KiB libunistring aarch64 0:1.1-11.fc44 fedora 1.7 MiB libusb1 aarch64 0:1.0.30-1.fc44 updates 179.7 KiB libuuid aarch64 0:2.41.5-1.fc44 updates 69.3 KiB libverto aarch64 0:0.3.2-12.fc44 fedora 69.3 KiB libxcrypt aarch64 0:4.5.2-3.fc44 fedora 273.2 KiB libxml2 aarch64 0:2.12.10-6.fc44 fedora 1.9 MiB libzstd aarch64 0:1.5.7-5.fc44 fedora 860.2 KiB linkdupes aarch64 0:0.7.3-2.fc44 updates 713.7 KiB lua-libs aarch64 0:5.4.8-5.fc44 fedora 329.8 KiB lua-srpm-macros noarch 0:1-17.fc44 fedora 1.3 KiB lz4-libs aarch64 0:1.10.0-4.fc44 fedora 197.3 KiB mpfr aarch64 0:4.2.2-3.fc44 fedora 755.4 KiB ncurses-base noarch 0:6.6-1.fc44 fedora 329.7 KiB ncurses-libs aarch64 0:6.6-1.fc44 fedora 1.2 MiB nettle aarch64 0:3.10.1-3.fc44 fedora 765.0 KiB ngtcp2 aarch64 0:1.22.1-1.fc44 updates 341.1 KiB ngtcp2-crypto-ossl aarch64 0:1.22.1-1.fc44 updates 67.5 KiB npth aarch64 0:1.8-4.fc44 fedora 93.3 KiB ocaml-srpm-macros noarch 0:11-3.fc44 fedora 1.9 KiB openblas-srpm-macros noarch 0:2-21.fc44 fedora 112.0 B openldap aarch64 0:2.6.14-1.fc44 updates 765.0 KiB openssl-libs aarch64 1:3.5.8-1.fc44 updates 7.4 MiB p11-kit aarch64 0:0.26.5-1.fc44 updates 2.8 MiB p11-kit-trust aarch64 0:0.26.5-1.fc44 updates 530.1 KiB package-notes-srpm-macros noarch 0:0.20-1.fc44 updates 1.6 KiB pam-libs aarch64 0:1.7.2-2.fc44 updates 222.7 KiB pcre2 aarch64 0:10.47-1.fc44.1 fedora 714.3 KiB pcre2-syntax noarch 0:10.47-1.fc44.1 fedora 281.9 KiB perl-srpm-macros noarch 0:1-61.fc44 fedora 861.0 B pkgconf aarch64 0:2.5.1-1.fc44 fedora 116.8 KiB pkgconf-m4 noarch 0:2.5.1-1.fc44 fedora 14.3 KiB pkgconf-pkg-config aarch64 0:2.5.1-1.fc44 fedora 990.0 B policycoreutils aarch64 0:3.11-2.fc44 updates 1.5 MiB popt aarch64 0:1.19-10.fc44 fedora 144.6 KiB publicsuffix-list-dafsa noarch 0:20260116-1.fc44 fedora 70.4 KiB pyproject-srpm-macros noarch 0:1.23.2-1.fc44 updates 3.4 KiB python-srpm-macros noarch 0:3.14-12.fc44 fedora 51.6 KiB qt5-srpm-macros noarch 0:5.15.18-2.fc44 fedora 500.0 B qt6-srpm-macros noarch 0:6.11.2-1.fc44 updates 472.0 B readline aarch64 0:8.3-4.fc44 fedora 563.5 KiB rpm aarch64 0:6.0.2-1.fc44 updates 3.3 MiB rpm-build-libs aarch64 0:6.0.2-1.fc44 updates 264.1 KiB rpm-libs aarch64 0:6.0.2-1.fc44 updates 995.2 KiB rpm-plugin-selinux aarch64 0:6.0.2-1.fc44 updates 67.9 KiB rpm-sequoia aarch64 0:1.10.3-1.fc44 updates 2.3 MiB rpm-sign-libs aarch64 0:6.0.2-1.fc44 updates 67.7 KiB rust-srpm-macros noarch 0:28.5-1.fc44 updates 5.5 KiB selinux-policy noarch 0:44.10-1.fc44 updates 32.1 KiB selinux-policy-targeted noarch 0:44.10-1.fc44 updates 18.6 MiB setup noarch 0:2.15.0-28.fc44 fedora 724.9 KiB sqlite-libs aarch64 0:3.51.2-2.fc44 updates 1.6 MiB systemd-libs aarch64 0:259.9-1.fc44 updates 2.5 MiB systemd-standalone-sysusers aarch64 0:259.9-1.fc44 updates 329.6 KiB tpm2-tss aarch64 0:4.1.3-9.fc44 fedora 2.1 MiB tree-sitter-srpm-macros noarch 0:0.4.2-2.fc44 fedora 8.3 KiB util-linux-core aarch64 0:2.41.5-1.fc44 updates 2.4 MiB xxhash-libs aarch64 0:0.8.3-4.fc44 fedora 85.8 KiB xz-libs aarch64 1:5.8.2-2.fc44 fedora 265.4 KiB zig-srpm-macros noarch 0:1-8.fc44 fedora 1.3 KiB zip aarch64 0:3.0-45.fc44 fedora 762.0 KiB zlib-ng-compat aarch64 0:2.3.3-3.fc44 fedora 133.4 KiB zstd aarch64 0:1.5.7-5.fc44 fedora 562.2 KiB Installing groups: Buildsystem building group Transaction Summary: Installing: 186 packages Total size of inbound packages is 67 MiB. Need to download 67 MiB. After this operation, 251 MiB extra will be used (install 251 MiB, remove 0 B). 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fedora-gpg-keys-0:44-2.noarch 100% | 26.2 MiB/s | 187.6 KiB | 00m00s [156/186] elfutils-default-yama-scope-0 100% | 1.6 MiB/s | 11.3 KiB | 00m00s [157/186] libpfm-0:4.13.0-20.fc44.aarch 100% | 25.9 MiB/s | 53.0 KiB | 00m00s [158/186] p11-kit-trust-0:0.26.5-1.fc44 100% | 34.0 MiB/s | 139.4 KiB | 00m00s [159/186] libevent-0:2.1.13-1.fc44.aarc 100% | 66.6 MiB/s | 272.6 KiB | 00m00s [160/186] p11-kit-0:0.26.5-1.fc44.aarch 100% | 74.5 MiB/s | 534.2 KiB | 00m00s [161/186] fedora-release-0:44-18.noarch 100% | 4.1 MiB/s | 12.5 KiB | 00m00s [162/186] systemd-standalone-sysusers-0 100% | 46.0 MiB/s | 141.2 KiB | 00m00s [163/186] xxhash-libs-0:0.8.3-4.fc44.aa 100% | 11.2 MiB/s | 34.5 KiB | 00m00s [164/186] fedora-release-identity-basic 100% | 6.5 MiB/s | 13.2 KiB | 00m00s [165/186] libcurl-0:8.18.0-10.fc44.aarc 100% | 138.0 MiB/s | 424.0 KiB | 00m00s [166/186] libnghttp3-0:1.18.0-1.fc44.aa 100% | 11.4 MiB/s | 70.1 KiB | 00m00s [167/186] libssh-0:0.12.2-1.fc44.aarch6 100% | 38.7 MiB/s | 277.1 KiB | 00m00s [168/186] ngtcp2-0:1.22.1-1.fc44.aarch6 100% | 28.8 MiB/s | 147.2 KiB | 00m00s [169/186] gdb-minimal-0:17.2-2.fc44.aar 100% | 188.8 MiB/s | 4.3 MiB | 00m00s [170/186] libbrotli-0:1.2.0-3.fc44.aarc 100% | 42.6 MiB/s | 348.7 KiB | 00m00s [171/186] libpsl-0:0.21.5-7.fc44.aarch6 100% | 7.9 MiB/s | 64.9 KiB | 00m00s [172/186] libssh-config-0:0.12.2-1.fc44 100% | 4.4 MiB/s | 8.9 KiB | 00m00s [173/186] libfido2-0:1.16.0-5.fc44.aarc 100% | 31.3 MiB/s | 96.2 KiB | 00m00s [174/186] publicsuffix-list-dafsa-0:202 100% | 14.7 MiB/s | 60.3 KiB | 00m00s [175/186] libcbor-0:0.13.0-2.fc44.aarch 100% | 8.4 MiB/s | 34.4 KiB | 00m00s [176/186] ngtcp2-crypto-ossl-0:1.22.1-1 100% | 8.5 MiB/s | 26.0 KiB | 00m00s [177/186] selinux-policy-0:44.10-1.fc44 100% | 8.6 MiB/s | 26.4 KiB | 00m00s [178/186] rpm-plugin-selinux-0:6.0.2-1. 100% | 5.6 MiB/s | 17.1 KiB | 00m00s [179/186] policycoreutils-0:3.11-2.fc44 100% | 63.6 MiB/s | 260.6 KiB | 00m00s [180/186] libselinux-utils-0:3.11-2.fc4 100% | 30.1 MiB/s | 123.4 KiB | 00m00s [181/186] keyutils-libs-0:1.6.3-7.fc44. 100% | 6.1 MiB/s | 31.5 KiB | 00m00s [182/186] krb5-libs-0:1.22.2-4.fc44.aar 100% | 82.6 MiB/s | 761.3 KiB | 00m00s [183/186] libcom_err-0:1.47.3-4.fc44.aa 100% | 4.4 MiB/s | 27.0 KiB | 00m00s [184/186] libverto-0:0.3.2-12.fc44.aarc 100% | 6.7 MiB/s | 20.5 KiB | 00m00s [185/186] libnghttp2-0:1.68.0-5.fc44.aa 100% | 14.5 MiB/s | 74.0 KiB | 00m00s [186/186] selinux-policy-targeted-0:44. 100% | 199.5 MiB/s | 6.8 MiB | 00m00s -------------------------------------------------------------------------------- [186/186] Total 100% | 171.0 MiB/s | 66.7 MiB | 00m00s Running transaction Importing OpenPGP key 0x6D9F90A6: UserID : "Fedora (44) " Fingerprint: 36F612DCF27F7D1A48A835E4DBFCF71C6D9F90A6 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-44-primary The key was successfully imported. [ 1/188] Verify package files 100% | 768.0 B/s | 186.0 B | 00m00s [ 2/188] Prepare transaction 100% | 2.5 KiB/s | 186.0 B | 00m00s [ 3/188] Installing libgcc-0:16.2.1-2. 100% | 109.4 MiB/s | 224.0 KiB | 00m00s [ 4/188] Installing publicsuffix-list- 100% | 69.4 MiB/s | 71.1 KiB | 00m00s [ 5/188] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 6/188] Installing fedora-release-ide 100% | 867.2 KiB/s | 888.0 B | 00m00s [ 7/188] Installing fedora-gpg-keys-0: 100% | 31.5 MiB/s | 355.3 KiB | 00m00s [ 8/188] Installing fedora-repos-0:44- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 9/188] Installing fedora-release-com 100% | 24.3 MiB/s | 24.9 KiB | 00m00s [ 10/188] Installing fedora-release-0:4 100% | 17.3 KiB/s | 124.0 B | 00m00s >>> Running sysusers scriptlet: setup-0:2.15.0-28.fc44.noarch >>> Finished sysusers scriptlet: setup-0:2.15.0-28.fc44.noarch >>> Scriptlet output: >>> Creating group 'adm' with GID 4. >>> Creating group 'audio' with GID 63. >>> Creating group 'cdrom' with GID 11. >>> Creating group 'clock' with GID 103. >>> Creating group 'dialout' with GID 18. >>> Creating group 'disk' with GID 6. >>> Creating group 'floppy' with GID 19. >>> Creating group 'ftp' with GID 50. >>> Creating group 'games' with GID 20. >>> Creating group 'input' with GID 104. >>> Creating group 'kmem' with GID 9. >>> Creating group 'kvm' with GID 36. >>> Creating group 'lock' with GID 54. >>> Creating group 'lp' with GID 7. >>> Creating group 'mail' with GID 12. >>> Creating group 'man' with GID 15. >>> Creating group 'mem' with GID 8. >>> Creating group 'nobody' with GID 65534. >>> Creating group 'render' with GID 105. >>> Creating group 'root' with GID 0. >>> Creating group 'sgx' with GID 106. >>> Creating group 'sys' with GID 3. >>> Creating group 'tape' with GID 33. >>> Creating group 'tty' with GID 5. >>> Creating group 'users' with GID 100. >>> Creating group 'utmp' with GID 22. >>> Creating group 'video' with GID 39. >>> Creating group 'wheel' with GID 10. >>> Creating user 'adm' (adm) with UID 3 and GID 4. >>> Creating group 'bin' with GID 1. >>> Creating user 'bin' (bin) with UID 1 and GID 1. >>> Creating group 'daemon' with GID 2. >>> Creating user 'daemon' (daemon) with UID 2 and GID 2. >>> Creating user 'ftp' (FTP User) with UID 14 and GID 50. >>> Creating user 'games' (games) with UID 12 and GID 100. >>> Creating user 'halt' (halt) with UID 7 and GID 0. >>> Creating user 'lp' (lp) with UID 4 and GID 7. >>> Creating user 'mail' (mail) with UID 8 and GID 12. >>> Creating user 'nobody' (Kernel Overflow User) with UID 65534 and GID 65534. >>> Creating user 'operator' (operator) with UID 11 and GID 0. >>> Creating user 'root' (Super User) with UID 0 and GID 0. >>> Creating user 'shutdown' (shutdown) with UID 6 and GID 0. >>> Creating user 'sync' (sync) with UID 5 and GID 0. >>> [ 11/188] Installing setup-0:2.15.0-28. 100% | 37.5 MiB/s | 730.6 KiB | 00m00s >>> [RPM] /etc/hosts created as /etc/hosts.rpmnew [ 12/188] Installing filesystem-0:3.18- 100% | 1.9 MiB/s | 212.8 KiB | 00m00s [ 13/188] Installing rust-srpm-macros-0 100% | 6.2 MiB/s | 6.4 KiB | 00m00s [ 14/188] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 748.0 B | 00m00s [ 15/188] Installing package-notes-srpm 100% | 0.0 B/s | 2.1 KiB | 00m00s [ 16/188] Installing pkgconf-m4-0:2.5.1 100% | 0.0 B/s | 14.7 KiB | 00m00s [ 17/188] Installing gnulib-l10n-0:2024 100% | 129.3 MiB/s | 661.9 KiB | 00m00s [ 18/188] Installing coreutils-common-0 100% | 296.9 MiB/s | 10.7 MiB | 00m00s [ 19/188] Installing pcre2-syntax-0:10. 100% | 138.8 MiB/s | 284.3 KiB | 00m00s [ 20/188] Installing ncurses-base-0:6.6 100% | 49.6 MiB/s | 355.3 KiB | 00m00s [ 21/188] Installing bash-0:5.3.9-3.fc4 100% | 210.8 MiB/s | 8.4 MiB | 00m00s [ 22/188] Installing glibc-common-0:2.4 100% | 60.3 MiB/s | 1.3 MiB | 00m00s [ 23/188] Installing glibc-gconv-extra- 100% | 351.6 MiB/s | 18.6 MiB | 00m00s [ 24/188] Installing glibc-0:2.43-8.fc4 100% | 148.5 MiB/s | 6.4 MiB | 00m00s [ 25/188] Installing ncurses-libs-0:6.6 100% | 249.2 MiB/s | 1.2 MiB | 00m00s [ 26/188] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 27/188] Installing zlib-ng-compat-0:2 100% | 131.1 MiB/s | 134.2 KiB | 00m00s [ 28/188] Installing bzip2-libs-0:1.0.8 100% | 71.9 MiB/s | 73.6 KiB | 00m00s [ 29/188] Installing libgpg-error-0:1.5 100% | 48.6 MiB/s | 995.5 KiB | 00m00s [ 30/188] Installing libstdc++-0:16.2.1 100% | 297.1 MiB/s | 3.0 MiB | 00m00s [ 31/188] Installing libassuan-0:2.5.7- 100% | 212.6 MiB/s | 217.7 KiB | 00m00s [ 32/188] Installing libgcrypt-0:1.12.2 100% | 240.0 MiB/s | 1.2 MiB | 00m00s [ 33/188] Installing readline-0:8.3-4.f 100% | 276.2 MiB/s | 565.6 KiB | 00m00s [ 34/188] Installing gmp-1:6.3.0-5.fc44 100% | 214.9 MiB/s | 660.1 KiB | 00m00s [ 35/188] Installing xz-libs-1:5.8.2-2. 100% | 260.2 MiB/s | 266.5 KiB | 00m00s [ 36/188] Installing libuuid-0:2.41.5-1 100% | 68.8 MiB/s | 70.4 KiB | 00m00s [ 37/188] Installing libzstd-0:1.5.7-5. 100% | 280.4 MiB/s | 861.5 KiB | 00m00s [ 38/188] Installing elfutils-libelf-0: 100% | 364.6 MiB/s | 1.5 MiB | 00m00s [ 39/188] Installing libacl-0:2.4.0-1.f 100% | 67.1 MiB/s | 68.8 KiB | 00m00s [ 40/188] Installing popt-0:1.19-10.fc4 100% | 49.2 MiB/s | 151.3 KiB | 00m00s [ 41/188] Installing systemd-libs-0:259 100% | 307.7 MiB/s | 2.5 MiB | 00m00s [ 42/188] Installing npth-0:1.8-4.fc44. 100% | 92.2 MiB/s | 94.4 KiB | 00m00s [ 43/188] Installing libblkid-0:2.41.5- 100% | 284.6 MiB/s | 291.5 KiB | 00m00s [ 44/188] Installing libxcrypt-0:4.5.2- 100% | 134.7 MiB/s | 275.9 KiB | 00m00s [ 45/188] Installing libsepol-0:3.11-1. 100% | 264.0 MiB/s | 810.9 KiB | 00m00s [ 46/188] Installing sqlite-libs-0:3.51 100% | 261.2 MiB/s | 1.6 MiB | 00m00s [ 47/188] Installing gnupg2-gpgconf-0:2 100% | 18.6 MiB/s | 323.9 KiB | 00m00s [ 48/188] Installing pcre2-0:10.47-1.fc 100% | 233.0 MiB/s | 715.7 KiB | 00m00s [ 49/188] Installing libselinux-0:3.11- 100% | 130.1 MiB/s | 266.4 KiB | 00m00s [ 50/188] Installing grep-0:3.12-3.fc44 100% | 47.2 MiB/s | 1.0 MiB | 00m00s [ 51/188] Installing sed-0:4.9-7.fc44.a 100% | 41.0 MiB/s | 881.3 KiB | 00m00s [ 52/188] Installing findutils-1:4.10.0 100% | 80.0 MiB/s | 1.9 MiB | 00m00s [ 53/188] Installing json-c-0:0.18-8.fc 100% | 136.5 MiB/s | 139.7 KiB | 00m00s [ 54/188] Installing libtasn1-0:4.21.0- 100% | 217.3 MiB/s | 222.5 KiB | 00m00s [ 55/188] Installing libunistring-0:1.1 100% | 291.0 MiB/s | 1.7 MiB | 00m00s [ 56/188] Installing libidn2-0:2.3.8-3. 100% | 55.3 MiB/s | 566.6 KiB | 00m00s [ 57/188] Installing crypto-policies-0: 100% | 19.2 MiB/s | 157.7 KiB | 00m00s [ 58/188] Installing xz-1:5.8.2-2.fc44. 100% | 57.9 MiB/s | 1.4 MiB | 00m00s [ 59/188] Installing libmount-0:2.41.5- 100% | 205.7 MiB/s | 421.3 KiB | 00m00s [ 60/188] Installing gnupg2-verify-0:2. 100% | 21.0 MiB/s | 365.7 KiB | 00m00s [ 61/188] Installing dwz-0:0.16-3.fc44. 100% | 19.8 MiB/s | 323.8 KiB | 00m00s [ 62/188] Installing mpfr-0:4.2.2-3.fc4 100% | 246.4 MiB/s | 757.1 KiB | 00m00s [ 63/188] Installing gawk-0:5.3.2-3.fc4 100% | 103.2 MiB/s | 2.6 MiB | 00m00s [ 64/188] Installing libksba-0:1.6.7-5. 100% | 195.7 MiB/s | 400.8 KiB | 00m00s [ 65/188] Installing unzip-0:6.0-69.fc4 100% | 30.9 MiB/s | 537.3 KiB | 00m00s [ 66/188] Installing file-libs-0:5.46-1 100% | 594.2 MiB/s | 11.9 MiB | 00m00s [ 67/188] Installing file-0:5.46-10.fc4 100% | 8.6 MiB/s | 141.6 KiB | 00m00s [ 68/188] Installing diffutils-0:3.12-5 100% | 73.8 MiB/s | 1.6 MiB | 00m00s [ 69/188] Installing libeconf-0:0.7.9-3 100% | 80.5 MiB/s | 82.5 KiB | 00m00s [ 70/188] Installing libsmartcols-0:2.4 100% | 220.2 MiB/s | 225.5 KiB | 00m00s [ 71/188] Installing lua-libs-0:5.4.8-5 100% | 161.7 MiB/s | 331.3 KiB | 00m00s [ 72/188] Installing libattr-0:2.6.0-1. 100% | 67.7 MiB/s | 69.3 KiB | 00m00s [ 73/188] Installing libcap-ng-0:0.9.6- 100% | 159.0 MiB/s | 162.8 KiB | 00m00s [ 74/188] Installing audit-libs-0:4.2.1 100% | 238.9 MiB/s | 489.3 KiB | 00m00s [ 75/188] Installing pam-libs-0:1.7.2-2 100% | 219.7 MiB/s | 225.0 KiB | 00m00s [ 76/188] Installing libcap-0:2.78-1.fc 100% | 27.9 MiB/s | 513.5 KiB | 00m00s [ 77/188] Installing libsemanage-0:3.11 100% | 176.7 MiB/s | 361.8 KiB | 00m00s [ 78/188] Installing alternatives-0:1.3 100% | 5.6 MiB/s | 91.6 KiB | 00m00s [ 79/188] Installing libffi-0:3.5.2-2.f 100% | 153.4 MiB/s | 157.1 KiB | 00m00s [ 80/188] Installing p11-kit-0:0.26.5-1 100% | 100.0 MiB/s | 2.8 MiB | 00m00s [ 81/188] Installing p11-kit-trust-0:0. 100% | 22.6 MiB/s | 531.9 KiB | 00m00s [ 82/188] Installing ngtcp2-0:1.22.1-1. 100% | 167.3 MiB/s | 342.7 KiB | 00m00s [ 83/188] Installing openssl-libs-1:3.5 100% | 322.7 MiB/s | 7.4 MiB | 00m00s [ 84/188] Installing coreutils-0:9.10-5 100% | 178.8 MiB/s | 8.2 MiB | 00m00s [ 85/188] Installing ca-certificates-0: 100% | 1.6 MiB/s | 2.5 MiB | 00m02s [ 86/188] Installing gzip-0:1.14-2.fc44 100% | 22.8 MiB/s | 443.0 KiB | 00m00s [ 87/188] Installing libfsverity-0:1.6- 100% | 67.7 MiB/s | 69.3 KiB | 00m00s [ 88/188] Installing rpm-sequoia-0:1.10 100% | 286.5 MiB/s | 2.3 MiB | 00m00s [ 89/188] Installing libevent-0:2.1.13- 100% | 271.7 MiB/s | 1.1 MiB | 00m00s [ 90/188] Installing ngtcp2-crypto-ossl 100% | 66.7 MiB/s | 68.3 KiB | 00m00s [ 91/188] Installing liblastlog2-0:2.41 100% | 22.8 MiB/s | 139.8 KiB | 00m00s [ 92/188] Installing util-linux-core-0: 100% | 91.3 MiB/s | 2.5 MiB | 00m00s [ 93/188] Installing zip-0:3.0-45.fc44. 100% | 41.5 MiB/s | 765.8 KiB | 00m00s [ 94/188] Installing gnupg2-keyboxd-0:2 100% | 38.2 MiB/s | 234.5 KiB | 00m00s [ 95/188] Installing libpsl-0:0.21.5-7. 100% | 130.3 MiB/s | 133.4 KiB | 00m00s [ 96/188] Installing tar-2:1.35-9.fc44. 100% | 111.3 MiB/s | 3.0 MiB | 00m00s [ 97/188] Installing linkdupes-0:0.7.3- 100% | 38.8 MiB/s | 715.1 KiB | 00m00s [ 98/188] Installing libselinux-utils-0 100% | 64.6 MiB/s | 1.4 MiB | 00m00s [ 99/188] Installing systemd-standalone 100% | 20.2 MiB/s | 330.2 KiB | 00m00s [100/188] Installing rpm-libs-0:6.0.2-1 100% | 243.3 MiB/s | 996.7 KiB | 00m00s [101/188] Installing libfdisk-0:2.41.5- 100% | 136.7 MiB/s | 419.9 KiB | 00m00s [102/188] Installing util-linux-0:2.41. 100% | 134.4 MiB/s | 6.9 MiB | 00m00s [103/188] Installing policycoreutils-0: 100% | 43.7 MiB/s | 1.5 MiB | 00m00s [104/188] Installing selinux-policy-0:4 100% | 1.5 MiB/s | 34.5 KiB | 00m00s [105/188] Installing selinux-policy-tar 100% | 127.4 MiB/s | 14.9 MiB | 00m00s [106/188] Installing libusb1-0:1.0.30-1 100% | 19.7 MiB/s | 181.4 KiB | 00m00s >>> Running sysusers scriptlet: tpm2-tss-0:4.1.3-9.fc44.aarch64 >>> Finished sysusers scriptlet: tpm2-tss-0:4.1.3-9.fc44.aarch64 >>> Scriptlet output: >>> Creating group 'tss' with GID 59. >>> Creating user 'tss' (Account used for TPM access) with UID 59 and GID 59. >>> [107/188] Installing tpm2-tss-0:4.1.3-9 100% | 269.6 MiB/s | 2.2 MiB | 00m00s [108/188] Installing ima-evm-utils-libs 100% | 91.7 MiB/s | 93.9 KiB | 00m00s [109/188] Installing gnupg2-gpg-agent-0 100% | 30.8 MiB/s | 850.9 KiB | 00m00s [110/188] Installing zstd-0:1.5.7-5.fc4 100% | 30.7 MiB/s | 565.8 KiB | 00m00s [111/188] Installing libxml2-0:2.12.10- 100% | 86.0 MiB/s | 1.9 MiB | 00m00s [112/188] Installing nettle-0:3.10.1-3. 100% | 250.1 MiB/s | 768.2 KiB | 00m00s [113/188] Installing gnutls-0:3.8.13-1. 100% | 309.1 MiB/s | 3.7 MiB | 00m00s [114/188] Installing bzip2-0:1.0.8-23.f 100% | 10.1 MiB/s | 175.6 KiB | 00m00s [115/188] Installing add-determinism-0: 100% | 89.6 MiB/s | 2.0 MiB | 00m00s [116/188] Installing build-reproducibil 100% | 0.0 B/s | 1.5 KiB | 00m00s [117/188] Installing cpio-0:2.15-9.fc44 100% | 52.2 MiB/s | 1.1 MiB | 00m00s [118/188] Installing ed-0:1.22.5-2.fc44 100% | 9.2 MiB/s | 160.1 KiB | 00m00s [119/188] Installing patch-0:2.8-4.fc44 100% | 15.2 MiB/s | 263.9 KiB | 00m00s [120/188] Installing libpkgconf-0:2.5.1 100% | 132.0 MiB/s | 135.2 KiB | 00m00s [121/188] Installing pkgconf-0:2.5.1-1. 100% | 6.9 MiB/s | 119.3 KiB | 00m00s [122/188] Installing pkgconf-pkg-config 100% | 118.2 KiB/s | 1.8 KiB | 00m00s [123/188] Installing libgomp-0:16.2.1-2 100% | 290.2 MiB/s | 594.3 KiB | 00m00s [124/188] Installing jansson-0:2.14-4.f 100% | 92.2 MiB/s | 94.4 KiB | 00m00s [125/188] Installing lz4-libs-0:1.10.0- 100% | 193.7 MiB/s | 198.4 KiB | 00m00s [126/188] Installing libarchive-0:3.8.7 100% | 238.7 MiB/s | 977.5 KiB | 00m00s [127/188] Installing libtool-ltdl-0:2.5 100% | 92.8 MiB/s | 95.0 KiB | 00m00s [128/188] Installing gdbm-libs-1:1.23-1 100% | 229.9 MiB/s | 235.4 KiB | 00m00s [129/188] Installing cyrus-sasl-lib-0:2 100% | 105.1 MiB/s | 2.4 MiB | 00m00s [130/188] Installing openldap-0:2.6.14- 100% | 187.7 MiB/s | 768.8 KiB | 00m00s [131/188] Installing gnupg2-dirmngr-0:2 100% | 26.4 MiB/s | 648.9 KiB | 00m00s [132/188] Installing gnupg2-0:2.4.9-16. 100% | 174.5 MiB/s | 6.5 MiB | 00m00s [133/188] Installing rpm-sign-libs-0:6. 100% | 66.9 MiB/s | 68.5 KiB | 00m00s [134/188] Installing gpgverify-0:2.2-4. 100% | 9.2 MiB/s | 9.4 KiB | 00m00s [135/188] Installing libpfm-0:4.13.0-20 100% | 247.4 MiB/s | 253.3 KiB | 00m00s [136/188] Installing xxhash-libs-0:0.8. 100% | 85.1 MiB/s | 87.2 KiB | 00m00s [137/188] Installing libnghttp3-0:1.18. 100% | 203.3 MiB/s | 208.2 KiB | 00m00s [138/188] Installing libbrotli-0:1.2.0- 100% | 222.5 MiB/s | 911.3 KiB | 00m00s [139/188] Installing libcbor-0:0.13.0-2 100% | 137.6 MiB/s | 140.9 KiB | 00m00s [140/188] Installing libfido2-0:1.16.0- 100% | 136.8 MiB/s | 280.1 KiB | 00m00s [141/188] Installing keyutils-libs-0:1. 100% | 97.3 MiB/s | 99.6 KiB | 00m00s [142/188] Installing libcom_err-0:1.47. 100% | 109.5 MiB/s | 112.1 KiB | 00m00s [143/188] Installing libverto-0:0.3.2-1 100% | 69.4 MiB/s | 71.1 KiB | 00m00s [144/188] Installing krb5-libs-0:1.22.2 100% | 253.4 MiB/s | 2.5 MiB | 00m00s [145/188] Installing libssh-0:0.12.2-1. 100% | 235.5 MiB/s | 723.4 KiB | 00m00s [146/188] Installing libnghttp2-0:1.68. 100% | 194.4 MiB/s | 199.1 KiB | 00m00s [147/188] Installing libcurl-0:8.18.0-1 100% | 239.7 MiB/s | 981.9 KiB | 00m00s [148/188] Installing curl-0:8.18.0-10.f 100% | 17.5 MiB/s | 466.9 KiB | 00m00s [149/188] Installing rpm-0:6.0.2-1.fc44 100% | 63.5 MiB/s | 2.8 MiB | 00m00s [150/188] Installing cmake-srpm-macros- 100% | 785.2 KiB/s | 804.0 B | 00m00s [151/188] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.2 KiB | 00m00s [152/188] Installing java-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [153/188] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [154/188] Installing tree-sitter-srpm-m 100% | 9.1 MiB/s | 9.3 KiB | 00m00s [155/188] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [156/188] Installing filesystem-srpm-ma 100% | 38.0 MiB/s | 38.9 KiB | 00m00s [157/188] Installing elfutils-default-y 100% | 408.6 KiB/s | 2.0 KiB | 00m00s [158/188] Installing elfutils-libs-0:0. 100% | 182.7 MiB/s | 748.5 KiB | 00m00s [159/188] Installing elfutils-debuginfo 100% | 7.9 MiB/s | 146.1 KiB | 00m00s [160/188] Installing elfutils-0:0.196-1 100% | 140.0 MiB/s | 3.8 MiB | 00m00s [161/188] Installing binutils-0:2.46.1- 100% | 294.3 MiB/s | 31.5 MiB | 00m00s [162/188] Installing gdb-minimal-0:17.2 100% | 246.1 MiB/s | 13.5 MiB | 00m00s [163/188] Installing debugedit-0:5.3-2. 100% | 18.6 MiB/s | 324.2 KiB | 00m00s [164/188] Installing rpm-build-libs-0:6 100% | 129.4 MiB/s | 264.9 KiB | 00m00s [165/188] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [166/188] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [167/188] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [168/188] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.1 KiB | 00m00s [169/188] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [170/188] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [171/188] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [172/188] Installing gap-srpm-macros-0: 100% | 0.0 B/s | 2.7 KiB | 00m00s [173/188] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [174/188] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [175/188] Installing gnome-srpm-macros- 100% | 4.0 MiB/s | 4.1 KiB | 00m00s [176/188] Installing redhat-rpm-config- 100% | 61.8 MiB/s | 189.9 KiB | 00m00s [177/188] Installing forge-srpm-macros- 100% | 39.3 MiB/s | 40.3 KiB | 00m00s [178/188] Installing rpm-build-0:6.0.2- 100% | 23.7 MiB/s | 607.8 KiB | 00m00s [179/188] Installing erlang-srpm-macros 100% | 2.4 MiB/s | 2.5 KiB | 00m00s [180/188] Installing pyproject-srpm-mac 100% | 0.0 B/s | 4.0 KiB | 00m00s [181/188] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s [182/188] Installing go-srpm-macros-0:3 100% | 61.6 MiB/s | 63.0 KiB | 00m00s [183/188] Installing python-srpm-macros 100% | 51.7 MiB/s | 52.9 KiB | 00m00s [184/188] Installing R-srpm-macros-0:1. 100% | 4.3 MiB/s | 4.4 KiB | 00m00s [185/188] Installing rpm-plugin-selinux 100% | 67.3 MiB/s | 68.9 KiB | 00m00s [186/188] Installing which-0:2.25-1.fc4 100% | 6.8 MiB/s | 125.8 KiB | 00m00s [187/188] Installing shadow-utils-2:4.1 100% | 102.1 MiB/s | 4.5 MiB | 00m00s [188/188] Installing info-0:7.2-9.fc44. 100% | 52.0 KiB/s | 421.9 KiB | 00m08s Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: R-srpm-macros-1.3.7-2.fc44.noarch add-determinism-0.7.3-2.fc44.aarch64 alternatives-1.33-5.fc44.aarch64 ansible-srpm-macros-1-20.1.fc44.noarch audit-libs-4.2.1-1.fc44.aarch64 bash-5.3.9-3.fc44.aarch64 binutils-2.46.1-1.fc44.aarch64 build-reproducibility-srpm-macros-0.7.3-2.fc44.noarch bzip2-1.0.8-23.fc44.aarch64 bzip2-libs-1.0.8-23.fc44.aarch64 ca-certificates-2026.2.90_v9.0.317-1.fc44.noarch cmake-srpm-macros-4.3.0-1.fc44.noarch coreutils-9.10-5.fc44.aarch64 coreutils-common-9.10-5.fc44.aarch64 cpio-2.15-9.fc44.aarch64 crypto-policies-20251128-3.git19878fe.fc44.noarch curl-8.18.0-10.fc44.aarch64 cyrus-sasl-lib-2.1.28-35.fc44.aarch64 debugedit-5.3-2.fc44.aarch64 diffutils-3.12-5.fc44.aarch64 dwz-0.16-3.fc44.aarch64 ed-1.22.5-2.fc44.aarch64 efi-srpm-macros-6-6.fc44.noarch elfutils-0.196-1.fc44.aarch64 elfutils-debuginfod-client-0.196-1.fc44.aarch64 elfutils-default-yama-scope-0.196-1.fc44.noarch elfutils-libelf-0.196-1.fc44.aarch64 elfutils-libs-0.196-1.fc44.aarch64 erlang-srpm-macros-0.3.11-1.fc44.noarch fedora-gpg-keys-44-2.noarch fedora-release-44-18.noarch fedora-release-common-44-18.noarch fedora-release-identity-basic-44-18.noarch fedora-repos-44-2.noarch file-5.46-10.fc44.aarch64 file-libs-5.46-10.fc44.aarch64 filesystem-3.18-52.fc44.aarch64 filesystem-srpm-macros-3.18-52.fc44.noarch findutils-4.10.0-7.fc44.aarch64 fonts-srpm-macros-5.0.0-2.fc44.noarch forge-srpm-macros-0.4.0-4.fc44.noarch fpc-srpm-macros-1.3-16.fc44.noarch gap-srpm-macros-2-2.fc44.noarch gawk-5.3.2-3.fc44.aarch64 gdb-minimal-17.2-2.fc44.aarch64 gdbm-libs-1.23-11.fc44.aarch64 ghc-srpm-macros-1.10-1.fc44.noarch glibc-2.43-8.fc44.aarch64 glibc-common-2.43-8.fc44.aarch64 glibc-gconv-extra-2.43-8.fc44.aarch64 glibc-minimal-langpack-2.43-8.fc44.aarch64 gmp-6.3.0-5.fc44.aarch64 gnat-srpm-macros-7-2.fc44.noarch gnome-srpm-macros-1.0-1.fc44.noarch gnulib-l10n-20241231-2.fc44.noarch gnupg2-2.4.9-16.fc44.aarch64 gnupg2-dirmngr-2.4.9-16.fc44.aarch64 gnupg2-gpg-agent-2.4.9-16.fc44.aarch64 gnupg2-gpgconf-2.4.9-16.fc44.aarch64 gnupg2-keyboxd-2.4.9-16.fc44.aarch64 gnupg2-verify-2.4.9-16.fc44.aarch64 gnutls-3.8.13-1.fc44.aarch64 go-srpm-macros-3.8.0-2.fc44.noarch gpg-pubkey-36f612dcf27f7d1a48a835e4dbfcf71c6d9f90a6-6786af3b gpgverify-2.2-4.fc44.noarch grep-3.12-3.fc44.aarch64 gzip-1.14-2.fc44.aarch64 ima-evm-utils-libs-1.6.2-8.fc44.aarch64 info-7.2-9.fc44.aarch64 jansson-2.14-4.fc44.aarch64 java-srpm-macros-1-8.fc44.noarch json-c-0.18-8.fc44.aarch64 kernel-srpm-macros-1.0-28.fc44.noarch keyutils-libs-1.6.3-7.fc44.aarch64 krb5-libs-1.22.2-4.fc44.aarch64 libacl-2.4.0-1.fc44.aarch64 libarchive-3.8.7-1.fc44.aarch64 libassuan-2.5.7-5.fc44.aarch64 libattr-2.6.0-1.fc44.aarch64 libblkid-2.41.5-1.fc44.aarch64 libbrotli-1.2.0-3.fc44.aarch64 libcap-2.78-1.fc44.aarch64 libcap-ng-0.9.6-1.fc44.aarch64 libcbor-0.13.0-2.fc44.aarch64 libcom_err-1.47.3-4.fc44.aarch64 libcurl-8.18.0-10.fc44.aarch64 libeconf-0.7.9-3.fc44.aarch64 libevent-2.1.13-1.fc44.aarch64 libfdisk-2.41.5-1.fc44.aarch64 libffi-3.5.2-2.fc44.aarch64 libfido2-1.16.0-5.fc44.aarch64 libfsverity-1.6-4.fc44.aarch64 libgcc-16.2.1-2.fc44.aarch64 libgcrypt-1.12.2-1.fc44.aarch64 libgomp-16.2.1-2.fc44.aarch64 libgpg-error-1.58-2.fc44.aarch64 libidn2-2.3.8-3.fc44.aarch64 libksba-1.6.7-5.fc44.aarch64 liblastlog2-2.41.5-1.fc44.aarch64 libmount-2.41.5-1.fc44.aarch64 libnghttp2-1.68.0-5.fc44.aarch64 libnghttp3-1.18.0-1.fc44.aarch64 libpfm-4.13.0-20.fc44.aarch64 libpkgconf-2.5.1-1.fc44.aarch64 libpsl-0.21.5-7.fc44.aarch64 libselinux-3.11-2.fc44.aarch64 libselinux-utils-3.11-2.fc44.aarch64 libsemanage-3.11-1.fc44.aarch64 libsepol-3.11-1.fc44.aarch64 libsmartcols-2.41.5-1.fc44.aarch64 libssh-0.12.2-1.fc44.aarch64 libssh-config-0.12.2-1.fc44.noarch libstdc++-16.2.1-2.fc44.aarch64 libtasn1-4.21.0-1.fc44.aarch64 libtool-ltdl-2.5.4-10.fc44.aarch64 libunistring-1.1-11.fc44.aarch64 libusb1-1.0.30-1.fc44.aarch64 libuuid-2.41.5-1.fc44.aarch64 libverto-0.3.2-12.fc44.aarch64 libxcrypt-4.5.2-3.fc44.aarch64 libxml2-2.12.10-6.fc44.aarch64 libzstd-1.5.7-5.fc44.aarch64 linkdupes-0.7.3-2.fc44.aarch64 lua-libs-5.4.8-5.fc44.aarch64 lua-srpm-macros-1-17.fc44.noarch lz4-libs-1.10.0-4.fc44.aarch64 mpfr-4.2.2-3.fc44.aarch64 ncurses-base-6.6-1.fc44.noarch ncurses-libs-6.6-1.fc44.aarch64 nettle-3.10.1-3.fc44.aarch64 ngtcp2-1.22.1-1.fc44.aarch64 ngtcp2-crypto-ossl-1.22.1-1.fc44.aarch64 npth-1.8-4.fc44.aarch64 ocaml-srpm-macros-11-3.fc44.noarch openblas-srpm-macros-2-21.fc44.noarch openldap-2.6.14-1.fc44.aarch64 openssl-libs-3.5.8-1.fc44.aarch64 p11-kit-0.26.5-1.fc44.aarch64 p11-kit-trust-0.26.5-1.fc44.aarch64 package-notes-srpm-macros-0.20-1.fc44.noarch pam-libs-1.7.2-2.fc44.aarch64 patch-2.8-4.fc44.aarch64 pcre2-10.47-1.fc44.1.aarch64 pcre2-syntax-10.47-1.fc44.1.noarch perl-srpm-macros-1-61.fc44.noarch pkgconf-2.5.1-1.fc44.aarch64 pkgconf-m4-2.5.1-1.fc44.noarch pkgconf-pkg-config-2.5.1-1.fc44.aarch64 policycoreutils-3.11-2.fc44.aarch64 popt-1.19-10.fc44.aarch64 publicsuffix-list-dafsa-20260116-1.fc44.noarch pyproject-srpm-macros-1.23.2-1.fc44.noarch python-srpm-macros-3.14-12.fc44.noarch qt5-srpm-macros-5.15.18-2.fc44.noarch qt6-srpm-macros-6.11.2-1.fc44.noarch readline-8.3-4.fc44.aarch64 redhat-rpm-config-344-2.fc44.noarch rpm-6.0.2-1.fc44.aarch64 rpm-build-6.0.2-1.fc44.aarch64 rpm-build-libs-6.0.2-1.fc44.aarch64 rpm-libs-6.0.2-1.fc44.aarch64 rpm-plugin-selinux-6.0.2-1.fc44.aarch64 rpm-sequoia-1.10.3-1.fc44.aarch64 rpm-sign-libs-6.0.2-1.fc44.aarch64 rust-srpm-macros-28.5-1.fc44.noarch sed-4.9-7.fc44.aarch64 selinux-policy-44.10-1.fc44.noarch selinux-policy-targeted-44.10-1.fc44.noarch setup-2.15.0-28.fc44.noarch shadow-utils-4.19.0-7.fc44.aarch64 sqlite-libs-3.51.2-2.fc44.aarch64 systemd-libs-259.9-1.fc44.aarch64 systemd-standalone-sysusers-259.9-1.fc44.aarch64 tar-1.35-9.fc44.aarch64 tpm2-tss-4.1.3-9.fc44.aarch64 tree-sitter-srpm-macros-0.4.2-2.fc44.noarch unzip-6.0-69.fc44.aarch64 util-linux-2.41.5-1.fc44.aarch64 util-linux-core-2.41.5-1.fc44.aarch64 which-2.25-1.fc44.aarch64 xxhash-libs-0.8.3-4.fc44.aarch64 xz-5.8.2-2.fc44.aarch64 xz-libs-5.8.2-2.fc44.aarch64 zig-srpm-macros-1-8.fc44.noarch zip-3.0-45.fc44.aarch64 zlib-ng-compat-2.3.3-3.fc44.aarch64 zstd-1.5.7-5.fc44.aarch64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1790208000 Wrote: /builddir/build/SRPMS/conglomerate-1.6.80-1.20120308git166303d.fc44.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-44-aarch64-1790274075.642985/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-_5ry6yup/conglomerate/conglomerate.spec) Config(child) 0 minutes 30 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/conglomerate-1.6.80-1.20120308git166303d.fc44.src.rpm) Config(fedora-44-aarch64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-44-aarch64-bootstrap-1790274075.642985/root. INFO: reusing tmpfs at /var/lib/mock/fedora-44-aarch64-bootstrap-1790274075.642985/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-44-aarch64-1790274075.642985/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-6.0.2-1.fc44.aarch64 rpm-sequoia-1.10.3-1.fc44.aarch64 dnf5-5.4.5.0-1.fc44.aarch64 dnf5-plugins-5.4.5.0-1.fc44.aarch64 Finish: chroot init Start: build phase for conglomerate-1.6.80-1.20120308git166303d.fc44.src.rpm Start: build setup for conglomerate-1.6.80-1.20120308git166303d.fc44.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1790208000 Wrote: /builddir/build/SRPMS/conglomerate-1.6.80-1.20120308git166303d.fc44.src.rpm Updating and loading repositories: updates 100% | 74.0 KiB/s | 9.3 KiB | 00m00s fedora 100% | 83.2 KiB/s | 10.5 KiB | 00m00s Copr repository 100% | 85.1 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: autoconf noarch 0:2.72-10.fc44 fedora 2.8 MiB automake noarch 0:1.18.1-4.fc44 fedora 1.8 MiB bicpl-devel aarch64 0:2.0.0-2.20260106git8be98a9.fc44 copr_base 196.8 KiB gcc aarch64 0:16.2.1-2.fc44 updates 112.5 MiB gcc-c++ aarch64 0:16.2.1-2.fc44 updates 44.8 MiB libminc-devel aarch64 0:2.4.03-31.fc44 updates 359.1 KiB libtool aarch64 0:2.5.4-10.fc44 fedora 2.7 MiB make aarch64 1:4.4.1-12.fc44 fedora 1.8 MiB netcdf-devel aarch64 0:4.9.3-2.fc44 fedora 397.7 KiB perl-Getopt-Tabular noarch 0:0.3-33.fc44 fedora 86.8 KiB perl-MNI noarch 0:0.08-1.20110321git075ae53.fc44 copr_base 439.5 KiB perl-interpreter aarch64 4:5.42.3-525.fc44 updates 174.9 KiB zlib-ng-compat-devel aarch64 0:2.3.3-3.fc44 fedora 107.0 KiB Installing dependencies: ImageMagick aarch64 1:7.1.2.31-1.fc44 updates 140.1 KiB ImageMagick-libs aarch64 1:7.1.2.31-1.fc44 updates 14.1 MiB LibRaw aarch64 0:0.22.2-1.fc44 updates 2.5 MiB abattis-cantarell-vf-fonts noarch 0:0.301-17.fc44 fedora 192.7 KiB adobe-mappings-cmap noarch 0:20231115-5.fc44 fedora 15.2 MiB adobe-mappings-cmap-deprecated noarch 0:20231115-5.fc44 fedora 582.1 KiB adobe-mappings-pdf noarch 0:20190401-12.fc44 fedora 4.4 MiB annobin-docs noarch 0:13.14-1.fc44 updates 99.3 KiB annobin-plugin-gcc aarch64 0:13.14-1.fc44 updates 711.3 KiB avahi-libs aarch64 0:0.9~rc2-8.fc44 fedora 229.9 KiB bicpl aarch64 0:2.0.0-2.20260106git8be98a9.fc44 copr_base 3.8 MiB blosc aarch64 0:1.21.6-10.fc44 fedora 129.8 KiB brotli aarch64 0:1.2.0-3.fc44 fedora 69.5 KiB brotli-devel aarch64 0:1.2.0-3.fc44 fedora 65.9 KiB bubblewrap aarch64 0:0.12.0-1.fc44 updates 183.8 KiB cairo aarch64 0:1.18.4-6.fc44 fedora 1.8 MiB cairo-gobject aarch64 0:1.18.4-6.fc44 fedora 67.0 KiB cmake aarch64 0:4.3.0-1.fc44 fedora 32.9 MiB cmake-data noarch 0:4.3.0-1.fc44 fedora 9.4 MiB cmake-filesystem aarch64 0:4.3.0-1.fc44 fedora 0.0 B cmake-rpm-macros noarch 0:4.3.0-1.fc44 fedora 8.4 KiB cpp aarch64 0:16.2.1-2.fc44 updates 40.8 MiB cups-filesystem 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223.9 KiB perl-Perl-OSType noarch 0:1.010-522.fc44 fedora 32.8 KiB perl-PerlIO-via-QuotedPrint noarch 0:0.10-521.fc44 fedora 30.2 KiB perl-Pod-Checker noarch 4:1.77-521.fc44 fedora 52.2 KiB perl-Pod-Escapes noarch 1:1.07-521.fc44 fedora 24.9 KiB perl-Pod-Functions noarch 0:1.14-525.fc44 updates 14.4 KiB perl-Pod-Html noarch 0:1.35-525.fc44 updates 42.3 KiB perl-Pod-Perldoc noarch 0:3.28.01-522.fc44 fedora 163.7 KiB perl-Pod-Simple noarch 1:3.47-4.fc44 fedora 565.3 KiB perl-Pod-Usage noarch 4:2.05-521.fc44 fedora 86.3 KiB perl-Safe noarch 0:2.47-525.fc44 updates 30.7 KiB perl-Scalar-List-Utils aarch64 5:1.70-2.fc44 fedora 152.8 KiB perl-Search-Dict noarch 0:1.08-525.fc44 updates 4.7 KiB perl-SelectSaver noarch 0:1.02-525.fc44 updates 2.2 KiB perl-SelfLoader noarch 0:1.28-525.fc44 updates 22.2 KiB perl-Socket aarch64 4:2.043-1.fc44 updates 145.8 KiB perl-Software-License noarch 0:0.104007-3.fc44 fedora 500.7 KiB perl-Storable aarch64 1:3.37-522.fc44 fedora 243.1 KiB perl-Sub-Exporter noarch 0:0.991-7.fc44 fedora 194.9 KiB perl-Sub-Install noarch 0:0.929-9.fc44 fedora 35.9 KiB perl-Symbol noarch 0:1.09-525.fc44 updates 6.8 KiB perl-Sys-Hostname aarch64 0:1.25-525.fc44 updates 71.8 KiB perl-Sys-Syslog aarch64 0:0.36-522.fc44 fedora 142.6 KiB perl-Term-ANSIColor noarch 0:5.01-522.fc44 fedora 97.5 KiB perl-Term-Cap noarch 0:1.18-521.fc44 fedora 29.3 KiB perl-Term-Complete noarch 0:1.403-525.fc44 updates 5.8 KiB perl-Term-ReadLine noarch 0:1.17-525.fc44 updates 17.3 KiB perl-Term-Table noarch 0:0.028-2.fc44 fedora 78.5 KiB perl-Test noarch 0:1.31-525.fc44 updates 37.0 KiB perl-Test-Harness noarch 1:3.52-5.fc44 fedora 560.8 KiB perl-Test-Simple noarch 3:1.302219-2.fc44 fedora 1.8 MiB perl-Text-Abbrev noarch 0:1.02-525.fc44 updates 3.1 KiB perl-Text-Balanced noarch 0:2.07-2.fc44 fedora 111.5 KiB perl-Text-Diff noarch 0:1.45-25.fc44 fedora 83.0 KiB perl-Text-Glob noarch 0:0.11-27.fc44 fedora 8.4 KiB perl-Text-ParseWords noarch 0:3.31-521.fc44 fedora 13.6 KiB perl-Text-Tabs+Wrap noarch 0:2024.001-521.fc44 fedora 22.6 KiB perl-Text-Template noarch 0:1.61-9.fc44 fedora 112.4 KiB perl-Thread noarch 0:3.06-525.fc44 updates 12.1 KiB perl-Thread-Queue noarch 0:3.14-521.fc44 fedora 28.9 KiB perl-Thread-Semaphore noarch 0:2.13-525.fc44 updates 10.0 KiB perl-Tie noarch 0:4.6-525.fc44 updates 32.1 KiB perl-Tie-File noarch 0:1.10-525.fc44 updates 85.6 KiB perl-Tie-Memoize noarch 0:1.1-525.fc44 updates 6.2 KiB perl-Tie-RefHash noarch 0:1.41-521.fc44 fedora 35.9 KiB perl-Time noarch 0:1.04-525.fc44 updates 9.8 KiB perl-Time-HiRes aarch64 4:1.9778-521.fc44 fedora 151.6 KiB perl-Time-Local noarch 2:1.350-521.fc44 fedora 69.0 KiB perl-Time-Piece aarch64 0:1.3600-525.fc44 updates 111.1 KiB perl-URI noarch 0:5.36-1.fc44 updates 275.7 KiB perl-Unicode-Collate aarch64 0:1.31-521.fc44 fedora 4.3 MiB perl-Unicode-Normalize aarch64 0:1.32-521.fc44 fedora 524.4 KiB perl-Unicode-UCD noarch 0:0.81-525.fc44 updates 206.4 KiB perl-User-pwent noarch 0:1.05-525.fc44 updates 17.1 KiB perl-autodie noarch 0:2.37-522.fc44 fedora 214.9 KiB perl-autouse noarch 0:1.11-525.fc44 updates 5.9 KiB perl-base noarch 0:2.27-525.fc44 updates 12.6 KiB perl-bignum noarch 0:0.67-522.fc44 fedora 133.1 KiB perl-blib noarch 0:1.07-525.fc44 updates 3.2 KiB perl-constant noarch 0:1.33-522.fc44 fedora 26.2 KiB perl-debugger noarch 0:1.60-525.fc44 updates 403.2 KiB perl-deprecate noarch 0:0.04-525.fc44 updates 6.6 KiB perl-devel aarch64 4:5.42.3-525.fc44 updates 3.8 MiB perl-diagnostics noarch 0:1.40-525.fc44 updates 471.3 KiB perl-doc noarch 0:5.42.3-525.fc44 updates 11.4 MiB perl-encoding aarch64 4:3.00-521.fc44 fedora 149.5 KiB perl-encoding-warnings noarch 0:0.14-525.fc44 updates 10.1 KiB perl-experimental noarch 0:0.036-3.fc44 fedora 43.4 KiB perl-fields noarch 0:2.27-525.fc44 updates 11.9 KiB perl-filetest noarch 0:1.03-525.fc44 updates 6.4 KiB perl-if noarch 0:0.61.000-525.fc44 updates 5.8 KiB perl-inc-latest noarch 2:0.500-32.fc44 fedora 34.6 KiB perl-less noarch 0:0.03-525.fc44 updates 4.9 KiB perl-lib aarch64 0:0.65-525.fc44 updates 8.5 KiB perl-libnet noarch 0:3.15-522.fc44 fedora 289.4 KiB perl-libnetcfg noarch 4:5.42.3-525.fc44 updates 16.9 KiB perl-libs aarch64 4:5.42.3-525.fc44 updates 11.6 MiB perl-local-lib noarch 0:2.000029-11.fc44 fedora 117.6 KiB perl-locale noarch 0:1.13-525.fc44 updates 6.1 KiB perl-macros noarch 4:5.42.3-525.fc44 updates 5.5 KiB perl-meta-notation noarch 0:5.42.3-525.fc44 updates 2.0 KiB perl-mro aarch64 0:1.29-525.fc44 updates 81.5 KiB perl-open noarch 0:1.13-525.fc44 updates 11.3 KiB perl-overload noarch 0:1.40-525.fc44 updates 71.6 KiB perl-overloading noarch 0:0.02-525.fc44 updates 4.9 KiB perl-parent noarch 1:0.244-521.fc44 fedora 10.3 KiB perl-perlfaq noarch 0:5.20250619-521.fc44 fedora 733.6 KiB perl-ph aarch64 0:5.42.3-525.fc44 updates 206.4 KiB perl-podlators noarch 1:6.0.2-521.fc44 fedora 317.5 KiB perl-sigtrap noarch 0:1.10-525.fc44 updates 11.1 KiB perl-sort noarch 0:2.06-525.fc44 updates 4.8 KiB perl-subs noarch 0:1.04-525.fc44 updates 2.1 KiB perl-threads aarch64 1:2.43-521.fc44 fedora 134.9 KiB perl-threads-shared aarch64 0:1.70-521.fc44 fedora 103.5 KiB perl-utils noarch 0:5.42.3-525.fc44 updates 97.0 KiB perl-vars noarch 0:1.05-525.fc44 updates 3.9 KiB perl-version aarch64 9:0.99.33-522.fc44 fedora 160.6 KiB perl-vmsish noarch 0:1.04-525.fc44 updates 6.6 KiB pixman aarch64 0:0.46.2-3.fc44 fedora 654.3 KiB publicsuffix-list noarch 0:20260116-1.fc44 fedora 342.2 KiB python-pip-wheel noarch 0:26.0.1-3.fc44 updates 1.2 MiB python3 aarch64 0:3.14.7-1.fc44 updates 84.8 KiB python3-libs aarch64 0:3.14.7-1.fc44 updates 45.6 MiB python3-pyparsing noarch 0:3.1.2-15.fc44 fedora 1.0 MiB rav1e-libs aarch64 0:0.8.1-3.fc44 fedora 2.1 MiB rhash aarch64 0:1.4.5-4.fc44 fedora 394.5 KiB shared-mime-info aarch64 0:2.4-3.fc44 fedora 5.3 MiB snappy aarch64 0:1.2.2-4.fc44 fedora 83.6 KiB svt-av1-libs aarch64 0:3.1.2-2.fc44 fedora 3.4 MiB systemtap-sdt-devel aarch64 0:5.5-2.fc44 updates 184.5 KiB systemtap-sdt-dtrace aarch64 0:5.5-2.fc44 updates 181.1 KiB tzdata noarch 0:2026c-2.fc44 updates 1.2 MiB urw-base35-bookman-fonts noarch 0:20200910-27.fc44 fedora 1.4 MiB urw-base35-c059-fonts noarch 0:20200910-27.fc44 fedora 1.4 MiB urw-base35-d050000l-fonts noarch 0:20200910-27.fc44 fedora 84.3 KiB urw-base35-fonts noarch 0:20200910-27.fc44 fedora 5.3 KiB urw-base35-fonts-common noarch 0:20200910-27.fc44 fedora 37.4 KiB urw-base35-gothic-fonts noarch 0:20200910-27.fc44 fedora 1.2 MiB urw-base35-nimbus-mono-ps-fonts noarch 0:20200910-27.fc44 fedora 1.0 MiB urw-base35-nimbus-roman-fonts noarch 0:20200910-27.fc44 fedora 1.4 MiB urw-base35-nimbus-sans-fonts noarch 0:20200910-27.fc44 fedora 2.4 MiB urw-base35-p052-fonts noarch 0:20200910-27.fc44 fedora 1.5 MiB urw-base35-standard-symbols-ps-fonts noarch 0:20200910-27.fc44 fedora 64.9 KiB urw-base35-z003-fonts noarch 0:20200910-27.fc44 fedora 390.8 KiB vim-filesystem noarch 2:9.2.1119-1.fc44 updates 40.0 B xml-common noarch 0:0.6.3-68.fc44 fedora 78.4 KiB Transaction Summary: Installing: 398 packages Total size of inbound packages is 210 MiB. Need to download 210 MiB. After this operation, 704 MiB extra will be used (install 704 MiB, remove 0 B). [ 1/398] automake-0:1.18.1-4.fc44.noar 100% | 27.2 MiB/s | 723.6 KiB | 00m00s [ 2/398] libtool-0:2.5.4-10.fc44.aarch 100% | 22.5 MiB/s | 621.4 KiB | 00m00s [ 3/398] autoconf-0:2.72-10.fc44.noarc 100% | 26.2 MiB/s | 830.9 KiB | 00m00s [ 4/398] perl-Getopt-Tabular-0:0.3-33. 100% | 11.3 MiB/s | 46.2 KiB | 00m00s [ 5/398] make-1:4.4.1-12.fc44.aarch64 100% | 51.8 MiB/s | 583.6 KiB | 00m00s [ 6/398] zlib-ng-compat-devel-0:2.3.3- 100% | 9.3 MiB/s | 38.1 KiB | 00m00s [ 7/398] perl-MNI-0:0.08-1.20110321git 100% | 17.7 MiB/s | 163.2 KiB | 00m00s [ 8/398] bicpl-devel-0:2.0.0-2.2026010 100% | 57.4 KiB/s | 940.0 B | 00m00s >>> Status code: 503 for https://download.copr.fedorainfracloud.org/results/mhough/neurofedora/fedora-44-aarch64/11031674-bicpl/bicpl-devel-2.0.0-2.20260106git8be98a9.fc44.aarch64.rpm (IP: 108.138.85.40) - https://download.copr.fedorainfracloud.org/results/mhough/neurofedora/fedora-44-aarch64/11031674-bicpl/bicpl-devel-2.0.0-2.20260106git8be98a9.fc44.aarch64.rpm >>> Status code: 503 for https://download.copr.fedorainfracloud.org/results/mhough/neurofedora/fedora-44-aarch64/11031674-bicpl/bicpl-devel-2.0.0-2.20260106git8be98a9.fc44.aarch64.rpm (IP: 108.138.85.40) - https://download.copr.fedorainfracloud.org/results/mhough/neurofedora/fedora-44-aarch64/11031674-bicpl/bicpl-devel-2.0.0-2.20260106git8be98a9.fc44.aarch64.rpm >>> Status code: 503 for https://download.copr.fedorainfracloud.org/results/mhough/neurofedora/fedora-44-aarch64/11031674-bicpl/bicpl-devel-2.0.0-2.20260106git8be98a9.fc44.aarch64.rpm (IP: 108.138.85.40) - https://download.copr.fedorainfracloud.org/results/mhough/neurofedora/fedora-44-aarch64/11031674-bicpl/bicpl-devel-2.0.0-2.20260106git8be98a9.fc44.aarch64.rpm >>> Status code: 503 for https://download.copr.fedorainfracloud.org/results/mhough/neurofedora/fedora-44-aarch64/11031674-bicpl/bicpl-devel-2.0.0-2.20260106git8be98a9.fc44.aarch64.rpm (IP: 108.138.85.40) - https://download.copr.fedorainfracloud.org/results/mhough/neurofedora/fedora-44-aarch64/11031674-bicpl/bicpl-devel-2.0.0-2.20260106git8be98a9.fc44.aarch64.rpm >>> No more mirrors to try - All mirrors were already tried without success [ 9/398] netcdf-devel-0:4.9.3-2.fc44.a 0% | 0.0 B/s | 0.0 B | 00m00s >>> Not finished - interrupted by error: Cannot download 11031674-bicpl/bicpl-devel-2.0.0-2.20260106git8be98a9.fc44.aarch64.rpm: All mirrors were tried [ 10/398] gcc-0:16.2.1-2.fc44.aarch64 4% | 152.5 MiB/s | 2.0 MiB | 00m00s >>> Not finished - interrupted by error: Cannot download 11031674-bicpl/bicpl-devel-2.0.0-2.20260106git8be98a9.fc44.aarch64.rpm: All mirrors were tried [ 11/398] gcc-c++-0:16.2.1-2.fc44.aarch 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 12/398] libminc-devel-0:2.4.03-31.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 13/398] perl-interpreter-4:5.42.3-525 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 14/398] emacs-filesystem-1:30.2-2.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 15/398] m4-0:1.4.21-1.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 16/398] perl-Carp-0:1.54-521.fc44.noa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 17/398] perl-Exporter-0:5.79-521.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 18/398] perl-File-Temp-1:0.231.200-2. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 19/398] perl-Getopt-Long-1:2.58-521.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 20/398] perl-PathTools-0:3.94-521.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 21/398] perl-Text-ParseWords-0:3.31-5 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 22/398] perl-constant-0:1.33-522.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 23/398] perl-File-Path-0:2.18-522.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 24/398] perl-Thread-Queue-0:3.14-521. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 25/398] perl-threads-1:2.43-521.fc44. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 26/398] hdf5-devel-0:1.14.6-7.fc44.aa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 27/398] netcdf-0:4.9.3-2.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 28/398] minc-tools-0:2.3.2-6.20260106 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 29/398] cmake-filesystem-0:4.3.0-1.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 30/398] bicpl-0:2.0.0-2.20260106git8b 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 31/398] cpp-0:16.2.1-2.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 32/398] libatomic-0:16.2.1-2.fc44.aar 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 33/398] libstdc++-devel-0:16.2.1-2.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 34/398] libminc-0:2.4.03-31.fc44.aarc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 35/398] cmake-0:4.3.0-1.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 36/398] nifticlib-devel-0:3.0.1-5.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 37/398] perl-libs-4:5.42.3-525.fc44.a 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 38/398] perl-Scalar-List-Utils-5:1.70 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 39/398] perl-parent-1:0.244-521.fc44. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 40/398] perl-Pod-Usage-4:2.05-521.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 41/398] perl-threads-shared-0:1.70-52 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 42/398] hdf5-0:1.14.6-7.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 43/398] libaec-devel-0:1.1.5-1.fc44.a 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 44/398] blosc-0:1.21.6-10.fc44.aarch6 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 45/398] libaec-0:1.1.5-1.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 46/398] libzip-0:1.11.4-3.fc44.aarch6 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 47/398] cmake-data-0:4.3.0-1.fc44.noa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 48/398] jsoncpp-0:1.9.6-3.fc44.aarch6 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 49/398] rhash-0:1.4.5-4.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 50/398] nifticlib-0:3.0.1-5.fc44.aarc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 51/398] perl-Encode-4:3.21-521.fc44.a 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 52/398] perl-Pod-Perldoc-0:3.28.01-52 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 53/398] perl-podlators-1:6.0.2-521.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 54/398] snappy-0:1.2.2-4.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 55/398] gcc-gfortran-0:16.2.1-2.fc44. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 56/398] perl-4:5.42.3-525.fc44.aarch6 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 57/398] perl-MIME-Base64-0:3.16-521.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 58/398] perl-Storable-1:3.37-522.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 59/398] groff-base-0:1.23.0-12.fc44.a 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 60/398] perl-Pod-Simple-1:3.47-4.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 61/398] perl-Term-ANSIColor-0:5.01-52 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 62/398] perl-Term-Cap-0:1.18-521.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 63/398] libgfortran-0:16.2.1-2.fc44.a 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 64/398] perl-Errno-0:1.38-525.fc44.aa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 65/398] perl-Pod-Functions-0:1.14-525 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 66/398] perl-devel-4:5.42.3-525.fc44. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 67/398] perl-diagnostics-0:1.40-525.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 68/398] perl-ph-0:5.42.3-525.fc44.aar 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 69/398] perl-utils-0:5.42.3-525.fc44. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 70/398] perl-CPAN-0:2.38-522.fc44.noa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 71/398] perl-CPAN-Meta-0:2.150013-1.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 72/398] perl-CPAN-Meta-Requirements-0 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 73/398] perl-CPAN-Meta-YAML-0:0.020-5 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 74/398] perl-Compress-Raw-Zlib-0:2.22 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 75/398] perl-Config-Perl-V-0:0.39-1.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 76/398] perl-DB_File-0:1.860-1.fc44.a 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 77/398] perl-Devel-PPPort-0:3.73-522. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 78/398] perl-Digest-0:1.20-521.fc44.n 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 79/398] perl-Digest-MD5-0:2.59-521.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 80/398] perl-Digest-SHA-1:6.04-522.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 81/398] perl-Encode-devel-4:3.21-521. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 82/398] perl-Env-0:1.06-521.fc44.noar 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 83/398] perl-ExtUtils-CBuilder-1:0.28 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 84/398] perl-ExtUtils-Command-2:7.76- 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 85/398] perl-ExtUtils-Install-0:2.22- 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 86/398] perl-ExtUtils-MM-Utils-2:7.76 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 87/398] perl-ExtUtils-MakeMaker-2:7.7 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 88/398] perl-ExtUtils-Manifest-1:1.75 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 89/398] perl-ExtUtils-ParseXS-1:3.61- 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 90/398] perl-File-Fetch-0:1.08-4.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 91/398] perl-Filter-2:1.65-2.fc44.aar 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 92/398] perl-Filter-Simple-0:0.96-521 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 93/398] perl-IO-Socket-IP-0:0.43-522. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 94/398] perl-IO-Zlib-1:1.15-521.fc44. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 95/398] perl-IPC-Cmd-2:1.04-522.fc44. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 96/398] perl-IPC-SysV-0:2.09-522.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 97/398] perl-JSON-PP-1:4.16-523.fc44. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 98/398] perl-Locale-Maketext-0:1.33-5 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [ 99/398] perl-Math-BigInt-1:2.0050.03- 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [100/398] perl-Math-BigInt-FastCalc-0:0 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [101/398] perl-Module-Load-1:0.36-521.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [102/398] perl-Module-Load-Conditional- 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [103/398] perl-Module-Metadata-0:1.0000 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [104/398] perl-Net-Ping-0:2.76-521.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [105/398] perl-Params-Check-1:0.38-521. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [106/398] perl-Perl-OSType-0:1.010-522. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [107/398] perl-PerlIO-via-QuotedPrint-0 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [108/398] perl-Pod-Checker-4:1.77-521.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [109/398] perl-Pod-Escapes-1:1.07-521.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [110/398] perl-Sys-Syslog-0:0.36-522.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [111/398] perl-Term-Table-0:0.028-2.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [112/398] perl-Test-Harness-1:3.52-5.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [113/398] perl-Test-Simple-3:1.302219-2 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [114/398] perl-Text-Balanced-0:2.07-2.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [115/398] perl-Text-Tabs+Wrap-0:2024.00 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [116/398] perl-Tie-RefHash-0:1.41-521.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [117/398] perl-Time-HiRes-4:1.9778-521. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [118/398] perl-Time-Local-2:1.350-521.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [119/398] perl-Unicode-Collate-0:1.31-5 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [120/398] perl-Unicode-Normalize-0:1.32 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [121/398] perl-autodie-0:2.37-522.fc44. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [122/398] perl-bignum-0:0.67-522.fc44.n 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [123/398] perl-encoding-4:3.00-521.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [124/398] perl-experimental-0:0.036-3.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [125/398] perl-libnet-0:3.15-522.fc44.n 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [126/398] perl-perlfaq-0:5.20250619-521 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [127/398] perl-version-9:0.99.33-522.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [128/398] ncurses-0:6.6-1.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [129/398] libxcrypt-devel-0:4.5.2-3.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [130/398] perl-Archive-Zip-0:1.68-18.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [131/398] perl-Compress-Bzip2-0:2.28-25 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [132/398] perl-Devel-Size-0:0.86-1.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [133/398] perl-File-HomeDir-0:1.006-16. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [134/398] perl-Module-Build-2:0.42.34-1 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [135/398] perl-Module-Signature-0:0.93- 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [136/398] perl-Text-Glob-0:0.11-27.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [137/398] perl-local-lib-0:2.000029-11. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [138/398] libdb-0:5.3.28-67.fc44.aarch6 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [139/398] perl-IPC-System-Simple-0:1.30 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [140/398] perl-File-Which-0:1.27-15.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [141/398] perl-Software-License-0:0.104 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [142/398] perl-inc-latest-2:0.500-32.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [143/398] perl-Text-Diff-0:1.45-25.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [144/398] perl-Data-Section-0:0.200008- 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [145/398] perl-Text-Template-0:1.61-9.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [146/398] perl-Algorithm-Diff-0:1.2010- 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [147/398] perl-MRO-Compat-0:0.15-13.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [148/398] perl-Sub-Exporter-0:0.991-7.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [149/398] perl-Data-OptList-0:0.114-8.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [150/398] perl-Package-Generator-0:1.10 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [151/398] perl-Params-Util-0:1.102-20.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [152/398] perl-Sub-Install-0:0.929-9.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [153/398] perl-AutoLoader-0:5.74-525.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [154/398] perl-File-Basename-0:2.86-525 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [155/398] perl-POSIX-0:2.23-525.fc44.aa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [156/398] perl-Sys-Hostname-0:1.25-525. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [157/398] perl-vars-0:1.05-525.fc44.noa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [158/398] ImageMagick-1:7.1.2.31-1.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [159/398] ImageMagick-libs-1:7.1.2.31-1 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [160/398] cairo-0:1.18.4-6.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [161/398] fftw-libs-double-0:3.3.10-17. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [162/398] fontconfig-0:2.17.0-4.fc44.aa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [163/398] imath-0:3.1.12-6.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [164/398] jbigkit-libs-0:2.1-33.fc44.aa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [165/398] lcms2-0:2.16-7.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [166/398] libICE-0:1.1.2-4.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [167/398] libSM-0:1.2.5-4.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [168/398] libX11-0:1.8.13-1.fc44.aarch6 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [169/398] libXext-0:1.3.6-5.fc44.aarch6 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [170/398] libXt-0:1.3.1-4.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [171/398] libgs-0:10.06.0-2.fc44.aarch6 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [172/398] libjpeg-turbo-0:3.1.3-1.fc44. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [173/398] liblqr-1-0:0.4.2-29.fc44.aarc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [174/398] libraqm-0:0.10.1-4.fc44.aarch 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [175/398] libultrahdr-0:1.4.0^20251202g 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [176/398] libwebp-0:1.6.0-3.fc44.aarch6 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [177/398] openexr-libs-0:3.2.4-7.fc44.a 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [178/398] openjpeg-0:2.5.4-3.fc44.aarch 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [179/398] pango-0:1.57.1-1.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [180/398] libXrender-0:0.9.12-4.fc44.aa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [181/398] libxcb-0:1.17.0-7.fc44.aarch6 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [182/398] lzo-0:2.10-16.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [183/398] pixman-0:0.46.2-3.fc44.aarch6 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [184/398] default-fonts-core-sans-0:4.3 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [185/398] fonts-filesystem-1:5.0.0-2.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [186/398] xml-common-0:0.6.3-68.fc44.no 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [187/398] libX11-common-0:1.8.13-1.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [188/398] adobe-mappings-cmap-0:2023111 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [189/398] adobe-mappings-cmap-deprecate 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [190/398] adobe-mappings-pdf-0:20190401 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [191/398] google-droid-sans-fonts-0:202 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [192/398] jbig2dec-libs-0:0.20-8.fc44.a 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [193/398] libijs-0:0.35-26.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [194/398] libpaper-1:2.1.1-10.fc44.aarc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [195/398] urw-base35-fonts-0:20200910-2 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [196/398] fribidi-0:1.0.16-4.fc44.aarch 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [197/398] libXft-0:2.3.8-10.fc44.aarch6 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [198/398] libthai-0:0.1.30-2.fc44.aarch 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [199/398] libXau-0:1.0.12-4.fc44.aarch6 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [200/398] abattis-cantarell-vf-fonts-0: 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [201/398] google-noto-sans-vf-fonts-0:2 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [202/398] urw-base35-bookman-fonts-0:20 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [203/398] urw-base35-c059-fonts-0:20200 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [204/398] urw-base35-d050000l-fonts-0:2 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [205/398] urw-base35-fonts-common-0:202 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [206/398] urw-base35-gothic-fonts-0:202 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [207/398] urw-base35-nimbus-mono-ps-fon 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [208/398] urw-base35-nimbus-roman-fonts 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [209/398] urw-base35-nimbus-sans-fonts- 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [210/398] urw-base35-p052-fonts-0:20200 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [211/398] urw-base35-standard-symbols-p 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [212/398] urw-base35-z003-fonts-0:20200 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [213/398] libdatrie-0:0.2.14-2.fc44.aar 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [214/398] google-noto-fonts-common-0:20 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [215/398] perl-B-0:1.89-525.fc44.aarch6 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [216/398] perl-if-0:0.61.000-525.fc44.n 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [217/398] perl-locale-0:1.13-525.fc44.n 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [218/398] perl-overload-0:1.40-525.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [219/398] perl-Fcntl-0:1.20-525.fc44.aa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [220/398] perl-FileHandle-0:2.05-525.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [221/398] perl-IO-0:1.55-525.fc44.aarch 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [222/398] perl-Socket-4:2.043-1.fc44.aa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [223/398] perl-Symbol-0:1.09-525.fc44.n 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [224/398] perl-File-Copy-0:2.41-525.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [225/398] perl-base-0:2.27-525.fc44.noa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [226/398] perl-Data-Dumper-0:2.192-523. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [227/398] perl-mro-0:1.29-525.fc44.aarc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [228/398] perl-Benchmark-0:1.27-525.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [229/398] perl-File-Find-0:1.44-525.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [230/398] perl-HTTP-Tiny-0:0.096-1.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [231/398] perl-IO-Socket-SSL-0:2.098-2. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [232/398] perl-Net-SSLeay-0:1.94-12.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [233/398] perl-IPC-Open3-0:1.24-525.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [234/398] perl-Locale-Maketext-Simple-1 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [235/398] perl-Module-CoreList-1:5.2026 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [236/398] perl-Module-CoreList-tools-1: 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [237/398] perl-File-Compare-0:1.100.800 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [238/398] perl-Pod-Html-0:1.35-525.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [239/398] perl-Math-Complex-0:1.63-525. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [240/398] perl-I18N-LangTags-0:0.45-525 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [241/398] perl-Class-Struct-0:0.68-525. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [242/398] perl-IO-Compress-0:2.223-1.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [243/398] perl-Compress-Raw-Bzip2-0:2.2 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [244/398] perl-Tie-0:4.6-525.fc44.noarc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [245/398] perl-URI-0:5.36-1.fc44.noarch 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [246/398] perl-MIME-Base32-0:1.303-25.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [247/398] perl-fields-0:2.27-525.fc44.n 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [248/398] perl-DynaLoader-0:1.57-525.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [249/398] perl-lib-0:0.65-525.fc44.aarc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [250/398] perl-AutoSplit-0:5.74-525.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [251/398] perl-Getopt-Std-0:1.14-525.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [252/398] perl-Archive-Tar-0:3.12-1.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [253/398] perl-IO-Compress-Lzma-0:2.217 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [254/398] perl-Compress-Raw-Lzma-0:2.22 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [255/398] perl-DirHandle-0:1.05-525.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [256/398] perl-Dumpvalue-0:2.27-525.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [257/398] perl-Safe-0:2.47-525.fc44.noa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [258/398] perl-Term-ReadLine-0:1.17-525 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [259/398] perl-User-pwent-0:1.05-525.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [260/398] perl-autouse-0:1.11-525.fc44. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [261/398] freetype-0:2.14.3-1.fc44.aarc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [262/398] glib2-0:2.88.3-1.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [263/398] harfbuzz-0:14.1.0-2.fc44.aarc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [264/398] graphite2-0:1.3.14-20.fc44.aa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [265/398] libdeflate-0:1.26-1.fc44.aarc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [266/398] expat-0:2.8.3-1.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [267/398] libcurl-devel-0:8.18.0-10.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [268/398] brotli-devel-0:1.2.0-3.fc44.a 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [269/398] libidn2-devel-0:2.3.8-3.fc44. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [270/398] libpsl-devel-0:0.21.5-7.fc44. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [271/398] brotli-0:1.2.0-3.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [272/398] publicsuffix-list-0:20260116- 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [273/398] glibc-devel-0:2.43-8.fc44.aar 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [274/398] cups-libs-1:2.4.19-3.fc44.aar 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [275/398] cups-filesystem-1:2.4.19-3.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [276/398] avahi-libs-0:0.9~rc2-8.fc44.a 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [277/398] dbus-libs-1:1.16.2-1.fc44.aar 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [278/398] libpng-2:1.6.58-1.fc44.aarch6 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [279/398] libtiff-0:4.7.2-1.fc44.aarch6 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [280/398] liblerc-0:4.0.0-10.fc44.aarch 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [281/398] vim-filesystem-2:9.2.1119-1.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [282/398] libuv-1:1.52.1-2.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [283/398] gettext-devel-0:0.26-5.fc44.a 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [284/398] gettext-0:0.26-5.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [285/398] gettext-common-devel-0:0.26-5 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [286/398] gettext-libs-0:0.26-5.fc44.aa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [287/398] gettext-runtime-0:0.26-5.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [288/398] libtextstyle-0:0.26-5.fc44.aa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [289/398] gettext-envsubst-0:0.26-5.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [290/398] perl-File-stat-0:1.14-525.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [291/398] perl-overloading-0:0.02-525.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [292/398] perl-Hash-Util-0:0.32-525.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [293/398] perl-ExtUtils-Constant-0:0.25 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [294/398] systemtap-sdt-devel-0:5.5-2.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [295/398] systemtap-sdt-dtrace-0:5.5-2. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [296/398] python3-pyparsing-0:3.1.2-15. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [297/398] perl-Opcode-0:1.69-525.fc44.a 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [298/398] perl-subs-0:1.04-525.fc44.noa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [299/398] perl-SelectSaver-0:1.02-525.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [300/398] perl-Hash-Util-FieldHash-0:1. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [301/398] perl-Attribute-Handlers-0:1.0 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [302/398] perl-Config-Extensions-0:0.03 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [303/398] perl-DBM_Filter-0:0.07-525.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [304/398] perl-Devel-Peek-0:1.36-525.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [305/398] perl-Devel-SelfStubber-0:1.06 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [306/398] perl-English-0:1.11-525.fc44. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [307/398] perl-ExtUtils-Embed-0:1.35-52 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [308/398] perl-ExtUtils-Miniperl-0:1.14 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [309/398] perl-File-DosGlob-0:1.12-525. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [310/398] perl-FileCache-0:1.10-525.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [311/398] perl-FindBin-0:1.54-525.fc44. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [312/398] perl-GDBM_File-1:1.24-525.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [313/398] perl-I18N-Collate-0:1.02-525. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [314/398] perl-I18N-Langinfo-0:0.24-525 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [315/398] perl-Memoize-0:1.17-525.fc44. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [316/398] perl-Module-Loaded-1:0.08-525 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [317/398] perl-NDBM_File-0:1.18-525.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [318/398] perl-NEXT-0:0.69-525.fc44.noa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [319/398] perl-Net-0:1.04-525.fc44.noar 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [320/398] perl-ODBM_File-0:1.20-525.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [321/398] perl-Search-Dict-0:1.08-525.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [322/398] perl-SelfLoader-0:1.28-525.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [323/398] perl-Term-Complete-0:1.403-52 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [324/398] perl-Test-0:1.31-525.fc44.noa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [325/398] perl-Text-Abbrev-0:1.02-525.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [326/398] perl-Thread-0:3.06-525.fc44.n 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [327/398] perl-Thread-Semaphore-0:2.13- 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [328/398] perl-Tie-File-0:1.10-525.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [329/398] perl-Tie-Memoize-0:1.1-525.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [330/398] perl-Time-0:1.04-525.fc44.noa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [331/398] perl-Time-Piece-0:1.3600-525. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [332/398] perl-Unicode-UCD-0:0.81-525.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [333/398] perl-blib-0:1.07-525.fc44.noa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [334/398] perl-debugger-0:1.60-525.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [335/398] perl-meta-notation-0:5.42.3-5 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [336/398] perl-sigtrap-0:1.10-525.fc44. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [337/398] perl-deprecate-0:0.04-525.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [338/398] perl-doc-0:5.42.3-525.fc44.no 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [339/398] perl-encoding-warnings-0:0.14 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [340/398] perl-filetest-0:1.03-525.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [341/398] perl-less-0:0.03-525.fc44.noa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [342/398] perl-libnetcfg-4:5.42.3-525.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [343/398] perl-macros-4:5.42.3-525.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [344/398] perl-open-0:1.13-525.fc44.noa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [345/398] perl-sort-0:2.06-525.fc44.noa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [346/398] perl-vmsish-0:1.04-525.fc44.n 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [347/398] krb5-devel-0:1.22.2-4.fc44.aa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [348/398] libkadm5-0:1.22.2-4.fc44.aarc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [349/398] keyutils-libs-devel-0:1.6.3-7 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [350/398] libcom_err-devel-0:1.47.3-4.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [351/398] libverto-devel-0:0.3.2-12.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [352/398] libnghttp2-devel-0:1.68.0-5.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [353/398] libnghttp3-devel-0:1.18.0-1.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [354/398] libssh-devel-0:0.12.2-1.fc44. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [355/398] ngtcp2-crypto-ossl-devel-0:1. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [356/398] ngtcp2-devel-0:1.22.1-1.fc44. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [357/398] openssl-devel-1:3.5.8-1.fc44. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [358/398] libselinux-devel-0:3.11-2.fc4 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [359/398] libsepol-devel-0:3.11-1.fc44. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [360/398] pcre2-devel-0:10.47-1.fc44.1. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [361/398] pcre2-utf16-0:10.47-1.fc44.1. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [362/398] pcre2-utf32-0:10.47-1.fc44.1. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [363/398] kernel-headers-0:7.2.4-200.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [364/398] libmpc-0:1.4.1-1.fc44.aarch64 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [365/398] libasan-0:16.2.1-2.fc44.aarch 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [366/398] libubsan-0:16.2.1-2.fc44.aarc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [367/398] LibRaw-0:0.22.2-1.fc44.aarch6 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [368/398] gdk-pixbuf2-0:2.44.6^really2. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [369/398] shared-mime-info-0:2.4-3.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [370/398] graphviz-libs-0:14.1.4-2.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [371/398] libjxl-1:0.11.2-1.fc44.aarch6 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [372/398] highway-0:1.3.0-2.fc44.aarch6 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [373/398] librsvg2-0:2.62.3-1.fc44.aarc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [374/398] cairo-gobject-0:1.18.4-6.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [375/398] libwmf-lite-0:0.2.16-1.fc44.a 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [376/398] python3-0:3.14.7-1.fc44.aarch 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [377/398] python3-libs-0:3.14.7-1.fc44. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [378/398] mpdecimal-0:4.0.1-3.fc44.aarc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [379/398] python-pip-wheel-0:26.0.1-3.f 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [380/398] tzdata-0:2026c-2.fc44.noarch 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [381/398] libdav1d-0:1.5.4-1.fc44.aarch 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [382/398] glycin-libs-0:2.1.5-1.fc44.aa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [383/398] glycin-loaders-0:2.1.5-1.fc44 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [384/398] bubblewrap-0:0.12.0-1.fc44.aa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [385/398] libheif-0:1.23.4-6.fc44.aarch 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [386/398] libopenjph-0:0.25.3-3.fc44.aa 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [387/398] noopenh264-0:2.6.0-4.fc44.aar 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [388/398] rav1e-libs-0:0.8.1-3.fc44.aar 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [389/398] svt-av1-libs-0:3.1.2-2.fc44.a 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [390/398] libseccomp-0:2.6.1-2.fc44.aar 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [391/398] libaom-0:3.13.3-1.fc44.aarch6 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [392/398] hdf-libs-0:4.3.0-5.fc44.aarch 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [393/398] libtirpc-0:1.3.8-0.fc44.aarch 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [394/398] gcc-plugin-annobin-0:16.2.1-2 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [395/398] cmake-rpm-macros-0:4.3.0-1.fc 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [396/398] ninja-build-0:1.13.2-2.fc44.a 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [397/398] annobin-plugin-gcc-0:13.14-1. 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted [398/398] annobin-docs-0:13.14-1.fc44.n 0% | 0.0 B/s | -1.0 B | ? >>> Interrupted -------------------------------------------------------------------------------- [398/398] Total 100% | 66.5 MiB/s | 4.9 MiB | 00m00s Failed to download packages Librepo error: Cannot download 11031674-bicpl/bicpl-devel-2.0.0-2.20260106git8be98a9.fc44.aarch64.rpm: All mirrors were tried WARNING: DNF5 command failed, retrying, attempt #2, sleeping 10s Updating and loading repositories: updates 100% | 47.4 KiB/s | 9.3 KiB | 00m00s fedora 100% | 53.2 KiB/s | 10.5 KiB | 00m00s Copr repository 100% | 76.6 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: autoconf noarch 0:2.72-10.fc44 fedora 2.8 MiB automake noarch 0:1.18.1-4.fc44 fedora 1.8 MiB bicpl-devel aarch64 0:2.0.0-2.20260106git8be98a9.fc44 copr_base 196.8 KiB gcc aarch64 0:16.2.1-2.fc44 updates 112.5 MiB gcc-c++ aarch64 0:16.2.1-2.fc44 updates 44.8 MiB libminc-devel aarch64 0:2.4.03-31.fc44 updates 359.1 KiB libtool aarch64 0:2.5.4-10.fc44 fedora 2.7 MiB make aarch64 1:4.4.1-12.fc44 fedora 1.8 MiB netcdf-devel aarch64 0:4.9.3-2.fc44 fedora 397.7 KiB perl-Getopt-Tabular noarch 0:0.3-33.fc44 fedora 86.8 KiB perl-MNI noarch 0:0.08-1.20110321git075ae53.fc44 copr_base 439.5 KiB perl-interpreter aarch64 4:5.42.3-525.fc44 updates 174.9 KiB zlib-ng-compat-devel aarch64 0:2.3.3-3.fc44 fedora 107.0 KiB Installing dependencies: ImageMagick aarch64 1:7.1.2.31-1.fc44 updates 140.1 KiB ImageMagick-libs aarch64 1:7.1.2.31-1.fc44 updates 14.1 MiB LibRaw aarch64 0:0.22.2-1.fc44 updates 2.5 MiB abattis-cantarell-vf-fonts noarch 0:0.301-17.fc44 fedora 192.7 KiB adobe-mappings-cmap noarch 0:20231115-5.fc44 fedora 15.2 MiB adobe-mappings-cmap-deprecated noarch 0:20231115-5.fc44 fedora 582.1 KiB adobe-mappings-pdf noarch 0:20190401-12.fc44 fedora 4.4 MiB annobin-docs noarch 0:13.14-1.fc44 updates 99.3 KiB annobin-plugin-gcc aarch64 0:13.14-1.fc44 updates 711.3 KiB avahi-libs aarch64 0:0.9~rc2-8.fc44 fedora 229.9 KiB bicpl aarch64 0:2.0.0-2.20260106git8be98a9.fc44 copr_base 3.8 MiB blosc aarch64 0:1.21.6-10.fc44 fedora 129.8 KiB brotli aarch64 0:1.2.0-3.fc44 fedora 69.5 KiB brotli-devel aarch64 0:1.2.0-3.fc44 fedora 65.9 KiB bubblewrap aarch64 0:0.12.0-1.fc44 updates 183.8 KiB cairo aarch64 0:1.18.4-6.fc44 fedora 1.8 MiB cairo-gobject aarch64 0:1.18.4-6.fc44 fedora 67.0 KiB cmake aarch64 0:4.3.0-1.fc44 fedora 32.9 MiB cmake-data noarch 0:4.3.0-1.fc44 fedora 9.4 MiB cmake-filesystem aarch64 0:4.3.0-1.fc44 fedora 0.0 B cmake-rpm-macros noarch 0:4.3.0-1.fc44 fedora 8.4 KiB cpp aarch64 0:16.2.1-2.fc44 updates 40.8 MiB cups-filesystem noarch 1:2.4.19-3.fc44 updates 0.0 B cups-libs aarch64 1:2.4.19-3.fc44 updates 730.8 KiB dbus-libs aarch64 1:1.16.2-1.fc44 fedora 397.5 KiB default-fonts-core-sans noarch 0:4.3-1.fc44 fedora 11.9 KiB emacs-filesystem aarch64 1:30.2-2.fc44 fedora 0.0 B expat aarch64 0:2.8.3-1.fc44 updates 378.4 KiB fftw-libs-double aarch64 0:3.3.10-17.fc44 fedora 1.8 MiB fontconfig aarch64 0:2.17.0-4.fc44 fedora 1.2 MiB fonts-filesystem noarch 1:5.0.0-2.fc44 fedora 0.0 B freetype aarch64 0:2.14.3-1.fc44 updates 878.6 KiB fribidi aarch64 0:1.0.16-4.fc44 fedora 246.0 KiB gcc-gfortran aarch64 0:16.2.1-2.fc44 updates 43.2 MiB gcc-plugin-annobin aarch64 0:16.2.1-2.fc44 updates 69.2 KiB gdk-pixbuf2 aarch64 0:2.44.6^really2.44.4-3.fc44 updates 2.6 MiB gettext aarch64 0:0.26-5.fc44 updates 13.5 MiB gettext-common-devel noarch 0:0.26-5.fc44 updates 593.4 KiB gettext-devel aarch64 0:0.26-5.fc44 updates 1.5 MiB gettext-envsubst aarch64 0:0.26-5.fc44 updates 107.5 KiB gettext-libs aarch64 0:0.26-5.fc44 updates 2.4 MiB gettext-runtime aarch64 0:0.26-5.fc44 updates 906.3 KiB glib2 aarch64 0:2.88.3-1.fc44 updates 15.8 MiB glibc-devel aarch64 0:2.43-8.fc44 updates 2.3 MiB glycin-libs aarch64 0:2.1.5-1.fc44 updates 4.1 MiB glycin-loaders aarch64 0:2.1.5-1.fc44 updates 12.9 MiB google-droid-sans-fonts noarch 0:20200215-24.fc44 fedora 6.3 MiB google-noto-fonts-common noarch 0:20251201-2.fc44 fedora 17.7 KiB google-noto-sans-vf-fonts noarch 0:20251201-2.fc44 fedora 1.4 MiB graphite2 aarch64 0:1.3.14-20.fc44 fedora 239.3 KiB graphviz-libs aarch64 0:14.1.4-2.fc44 updates 1.3 MiB groff-base aarch64 0:1.23.0-12.fc44 fedora 4.2 MiB harfbuzz aarch64 0:14.1.0-2.fc44 updates 2.7 MiB hdf-libs aarch64 0:4.3.0-5.fc44 fedora 722.6 KiB hdf5 aarch64 0:1.14.6-7.fc44 fedora 7.0 MiB hdf5-devel aarch64 0:1.14.6-7.fc44 fedora 3.3 MiB highway aarch64 0:1.3.0-2.fc44 fedora 1.5 MiB imath aarch64 0:3.1.12-6.fc44 fedora 387.6 KiB jbig2dec-libs aarch64 0:0.20-8.fc44 fedora 172.9 KiB jbigkit-libs aarch64 0:2.1-33.fc44 fedora 181.2 KiB jsoncpp aarch64 0:1.9.6-3.fc44 fedora 271.7 KiB kernel-headers aarch64 0:7.2.4-200.fc44 updates 6.9 MiB keyutils-libs-devel aarch64 0:1.6.3-7.fc44 fedora 48.2 KiB krb5-devel aarch64 0:1.22.2-4.fc44 updates 709.9 KiB lcms2 aarch64 0:2.16-7.fc44 fedora 484.7 KiB libICE aarch64 0:1.1.2-4.fc44 fedora 222.2 KiB libSM aarch64 0:1.2.5-4.fc44 fedora 128.9 KiB libX11 aarch64 0:1.8.13-1.fc44 fedora 1.3 MiB libX11-common noarch 0:1.8.13-1.fc44 fedora 1.1 MiB libXau aarch64 0:1.0.12-4.fc44 fedora 120.8 KiB libXext aarch64 0:1.3.6-5.fc44 fedora 145.7 KiB libXft aarch64 0:2.3.8-10.fc44 fedora 192.2 KiB libXrender aarch64 0:0.9.12-4.fc44 fedora 69.9 KiB libXt aarch64 0:1.3.1-4.fc44 fedora 477.4 KiB libaec aarch64 0:1.1.5-1.fc44 fedora 154.3 KiB libaec-devel aarch64 0:1.1.5-1.fc44 fedora 22.5 KiB libaom aarch64 0:3.13.3-1.fc44 updates 3.8 MiB libasan aarch64 0:16.2.1-2.fc44 updates 1.5 MiB libatomic aarch64 0:16.2.1-2.fc44 updates 77.7 KiB libcom_err-devel aarch64 0:1.47.3-4.fc44 fedora 16.7 KiB libcurl-devel aarch64 0:8.18.0-10.fc44 updates 1.4 MiB libdatrie aarch64 0:0.2.14-2.fc44 fedora 93.7 KiB libdav1d aarch64 0:1.5.4-1.fc44 updates 920.8 KiB libdb aarch64 0:5.3.28-67.fc44 fedora 1.7 MiB libdeflate aarch64 0:1.26-1.fc44 updates 163.9 KiB libgfortran aarch64 0:16.2.1-2.fc44 updates 1.7 MiB libgs aarch64 0:10.06.0-2.fc44 fedora 24.0 MiB libheif aarch64 0:1.23.4-6.fc44 updates 2.6 MiB libidn2-devel aarch64 0:2.3.8-3.fc44 fedora 149.1 KiB libijs aarch64 0:0.35-26.fc44 fedora 101.4 KiB libjpeg-turbo aarch64 0:3.1.3-1.fc44 fedora 677.7 KiB libjxl aarch64 1:0.11.2-1.fc44 updates 2.6 MiB libkadm5 aarch64 0:1.22.2-4.fc44 updates 266.0 KiB liblerc aarch64 0:4.0.0-10.fc44 fedora 546.3 KiB liblqr-1 aarch64 0:0.4.2-29.fc44 fedora 109.1 KiB libminc aarch64 0:2.4.03-31.fc44 updates 668.9 KiB libmpc aarch64 0:1.4.1-1.fc44 updates 216.8 KiB libnghttp2-devel aarch64 0:1.68.0-5.fc44 updates 288.0 KiB libnghttp3-devel aarch64 0:1.18.0-1.fc44 updates 119.4 KiB libopenjph aarch64 0:0.25.3-3.fc44 fedora 325.6 KiB libpaper aarch64 1:2.1.1-10.fc44 fedora 96.7 KiB libpng aarch64 2:1.6.58-1.fc44 updates 269.7 KiB libpsl-devel aarch64 0:0.21.5-7.fc44 fedora 110.2 KiB libraqm aarch64 0:0.10.1-4.fc44 fedora 68.5 KiB librsvg2 aarch64 0:2.62.3-1.fc44 updates 4.7 MiB libseccomp aarch64 0:2.6.1-2.fc44 updates 246.3 KiB libselinux-devel aarch64 0:3.11-2.fc44 updates 121.9 KiB libsepol-devel aarch64 0:3.11-1.fc44 updates 120.7 KiB libssh-devel aarch64 0:0.12.2-1.fc44 updates 204.2 KiB libstdc++-devel aarch64 0:16.2.1-2.fc44 updates 40.4 MiB libtextstyle aarch64 0:0.26-5.fc44 updates 397.6 KiB libthai aarch64 0:0.1.30-2.fc44 fedora 824.9 KiB libtiff aarch64 0:4.7.2-1.fc44 updates 659.4 KiB libtirpc aarch64 0:1.3.8-0.fc44 updates 212.0 KiB libubsan aarch64 0:16.2.1-2.fc44 updates 475.9 KiB libultrahdr aarch64 0:1.4.0^20251202git8cbc983-1.fc44 fedora 347.6 KiB libuv aarch64 1:1.52.1-2.fc44 updates 616.4 KiB libverto-devel aarch64 0:0.3.2-12.fc44 fedora 25.7 KiB libwebp aarch64 0:1.6.0-3.fc44 fedora 816.8 KiB libwmf-lite aarch64 0:0.2.16-1.fc44 updates 168.2 KiB libxcb aarch64 0:1.17.0-7.fc44 fedora 2.1 MiB libxcrypt-devel aarch64 0:4.5.2-3.fc44 fedora 31.0 KiB libzip aarch64 0:1.11.4-3.fc44 fedora 135.6 KiB lzo aarch64 0:2.10-16.fc44 fedora 162.8 KiB m4 aarch64 0:1.4.21-1.fc44 fedora 888.6 KiB minc-tools aarch64 0:2.3.2-6.20260106gite382598.fc44 copr_base 2.4 MiB mpdecimal aarch64 0:4.0.1-3.fc44 fedora 281.1 KiB ncurses aarch64 0:6.6-1.fc44 fedora 895.4 KiB netcdf aarch64 0:4.9.3-2.fc44 fedora 3.1 MiB ngtcp2-crypto-ossl-devel aarch64 0:1.22.1-1.fc44 updates 7.5 KiB ngtcp2-devel aarch64 0:1.22.1-1.fc44 updates 262.8 KiB nifticlib aarch64 0:3.0.1-5.fc44 fedora 1.1 MiB nifticlib-devel aarch64 0:3.0.1-5.fc44 fedora 229.2 KiB ninja-build aarch64 0:1.13.2-2.fc44 fedora 467.8 KiB noopenh264 aarch64 0:2.6.0-4.fc44 fedora 95.1 KiB openexr-libs aarch64 0:3.2.4-7.fc44 fedora 6.6 MiB openjpeg aarch64 0:2.5.4-3.fc44 fedora 412.2 KiB openssl-devel aarch64 1:3.5.8-1.fc44 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perl-Class-Struct noarch 0:0.68-525.fc44 updates 25.4 KiB perl-Compress-Bzip2 aarch64 0:2.28-25.fc44 fedora 146.5 KiB perl-Compress-Raw-Bzip2 aarch64 0:2.218-1.fc44 updates 104.8 KiB perl-Compress-Raw-Lzma aarch64 0:2.221-1.fc44 fedora 161.9 KiB perl-Compress-Raw-Zlib aarch64 0:2.222-1.fc44 fedora 168.3 KiB perl-Config-Extensions noarch 0:0.03-525.fc44 updates 2.7 KiB perl-Config-Perl-V noarch 0:0.39-1.fc44 fedora 26.0 KiB perl-DBM_Filter noarch 0:0.07-525.fc44 updates 28.7 KiB perl-DB_File aarch64 0:1.860-1.fc44 fedora 201.6 KiB perl-Data-Dumper aarch64 0:2.192-523.fc44 updates 135.6 KiB perl-Data-OptList noarch 0:0.114-8.fc44 fedora 50.1 KiB perl-Data-Section noarch 0:0.200008-9.fc44 fedora 42.7 KiB perl-Devel-PPPort aarch64 0:3.73-522.fc44 fedora 917.7 KiB perl-Devel-Peek aarch64 0:1.36-525.fc44 updates 91.4 KiB perl-Devel-SelfStubber noarch 0:1.06-525.fc44 updates 6.8 KiB perl-Devel-Size aarch64 0:0.86-1.fc44 fedora 94.1 KiB perl-Digest noarch 0:1.20-521.fc44 fedora 35.3 KiB perl-Digest-MD5 aarch64 0:2.59-521.fc44 fedora 103.6 KiB perl-Digest-SHA aarch64 1:6.04-522.fc44 fedora 136.4 KiB perl-DirHandle noarch 0:1.05-525.fc44 updates 3.4 KiB perl-Dumpvalue noarch 0:2.27-525.fc44 updates 19.8 KiB perl-DynaLoader aarch64 0:1.57-525.fc44 updates 32.1 KiB perl-Encode aarch64 4:3.21-521.fc44 fedora 4.8 MiB perl-Encode-devel aarch64 4:3.21-521.fc44 fedora 99.6 KiB perl-English noarch 0:1.11-525.fc44 updates 6.2 KiB perl-Env noarch 0:1.06-521.fc44 fedora 26.1 KiB perl-Errno aarch64 0:1.38-525.fc44 updates 8.4 KiB perl-Exporter noarch 0:5.79-521.fc44 fedora 54.3 KiB perl-ExtUtils-CBuilder noarch 1:0.280242-521.fc44 fedora 97.3 KiB perl-ExtUtils-Command noarch 2:7.76-522.fc44 fedora 9.6 KiB perl-ExtUtils-Constant noarch 0:0.25-525.fc44 updates 85.9 KiB perl-ExtUtils-Embed noarch 0:1.35-525.fc44 updates 15.6 KiB perl-ExtUtils-Install noarch 0:2.22-521.fc44 fedora 85.5 KiB perl-ExtUtils-MM-Utils noarch 2:7.76-522.fc44 fedora 2.9 KiB perl-ExtUtils-MakeMaker noarch 2:7.76-522.fc44 fedora 739.7 KiB perl-ExtUtils-Manifest noarch 1:1.75-521.fc44 fedora 84.8 KiB perl-ExtUtils-Miniperl noarch 0:1.14-525.fc44 updates 8.3 KiB perl-ExtUtils-ParseXS noarch 1:3.61-2.fc44 fedora 712.7 KiB perl-Fcntl aarch64 0:1.20-525.fc44 updates 92.7 KiB perl-File-Basename noarch 0:2.86-525.fc44 updates 14.0 KiB perl-File-Compare noarch 0:1.100.800-525.fc44 updates 5.6 KiB perl-File-Copy noarch 0:2.41-525.fc44 updates 19.7 KiB perl-File-DosGlob aarch64 0:1.12-525.fc44 updates 76.8 KiB perl-File-Fetch noarch 0:1.08-4.fc44 fedora 60.3 KiB perl-File-Find noarch 0:1.44-525.fc44 updates 42.0 KiB perl-File-HomeDir noarch 0:1.006-16.fc44 fedora 119.3 KiB perl-File-Path noarch 0:2.18-522.fc44 fedora 63.5 KiB perl-File-Temp noarch 1:0.231.200-2.fc44 fedora 163.7 KiB perl-File-Which noarch 0:1.27-15.fc44 fedora 30.4 KiB perl-File-stat noarch 0:1.14-525.fc44 updates 12.5 KiB perl-FileCache noarch 0:1.10-525.fc44 updates 7.5 KiB perl-FileHandle noarch 0:2.05-525.fc44 updates 9.4 KiB 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noarch 1:5.20260820-1.fc44 updates 18.6 KiB perl-Module-Load noarch 1:0.36-521.fc44 fedora 14.9 KiB perl-Module-Load-Conditional noarch 0:0.74-521.fc44 fedora 28.7 KiB perl-Module-Loaded noarch 1:0.08-525.fc44 updates 5.0 KiB perl-Module-Metadata noarch 0:1.000038-521.fc44 fedora 67.5 KiB perl-Module-Signature noarch 0:0.93-3.fc44 fedora 136.5 KiB perl-NDBM_File aarch64 0:1.18-525.fc44 updates 72.4 KiB perl-NEXT noarch 0:0.69-525.fc44 updates 23.6 KiB perl-Net noarch 0:1.04-525.fc44 updates 22.4 KiB perl-Net-Ping noarch 0:2.76-521.fc44 fedora 134.2 KiB perl-Net-SSLeay aarch64 0:1.94-12.fc44 fedora 1.4 MiB perl-ODBM_File aarch64 0:1.20-525.fc44 updates 72.5 KiB perl-Opcode aarch64 0:1.69-525.fc44 updates 92.5 KiB perl-POSIX aarch64 0:2.23-525.fc44 updates 261.5 KiB perl-Package-Generator noarch 0:1.106-35.fc44 fedora 29.9 KiB perl-Params-Check noarch 1:0.38-521.fc44 fedora 27.6 KiB perl-Params-Util aarch64 0:1.102-20.fc44 fedora 102.4 KiB perl-PathTools aarch64 0:3.94-521.fc44 fedora 223.9 KiB perl-Perl-OSType noarch 0:1.010-522.fc44 fedora 32.8 KiB perl-PerlIO-via-QuotedPrint noarch 0:0.10-521.fc44 fedora 30.2 KiB perl-Pod-Checker noarch 4:1.77-521.fc44 fedora 52.2 KiB perl-Pod-Escapes noarch 1:1.07-521.fc44 fedora 24.9 KiB perl-Pod-Functions noarch 0:1.14-525.fc44 updates 14.4 KiB perl-Pod-Html noarch 0:1.35-525.fc44 updates 42.3 KiB perl-Pod-Perldoc noarch 0:3.28.01-522.fc44 fedora 163.7 KiB perl-Pod-Simple noarch 1:3.47-4.fc44 fedora 565.3 KiB perl-Pod-Usage noarch 4:2.05-521.fc44 fedora 86.3 KiB perl-Safe noarch 0:2.47-525.fc44 updates 30.7 KiB perl-Scalar-List-Utils aarch64 5:1.70-2.fc44 fedora 152.8 KiB perl-Search-Dict noarch 0:1.08-525.fc44 updates 4.7 KiB perl-SelectSaver noarch 0:1.02-525.fc44 updates 2.2 KiB perl-SelfLoader noarch 0:1.28-525.fc44 updates 22.2 KiB perl-Socket aarch64 4:2.043-1.fc44 updates 145.8 KiB perl-Software-License noarch 0:0.104007-3.fc44 fedora 500.7 KiB perl-Storable aarch64 1:3.37-522.fc44 fedora 243.1 KiB perl-Sub-Exporter noarch 0:0.991-7.fc44 fedora 194.9 KiB perl-Sub-Install noarch 0:0.929-9.fc44 fedora 35.9 KiB perl-Symbol noarch 0:1.09-525.fc44 updates 6.8 KiB perl-Sys-Hostname aarch64 0:1.25-525.fc44 updates 71.8 KiB perl-Sys-Syslog aarch64 0:0.36-522.fc44 fedora 142.6 KiB perl-Term-ANSIColor noarch 0:5.01-522.fc44 fedora 97.5 KiB perl-Term-Cap noarch 0:1.18-521.fc44 fedora 29.3 KiB perl-Term-Complete noarch 0:1.403-525.fc44 updates 5.8 KiB perl-Term-ReadLine noarch 0:1.17-525.fc44 updates 17.3 KiB perl-Term-Table noarch 0:0.028-2.fc44 fedora 78.5 KiB perl-Test noarch 0:1.31-525.fc44 updates 37.0 KiB perl-Test-Harness noarch 1:3.52-5.fc44 fedora 560.8 KiB perl-Test-Simple noarch 3:1.302219-2.fc44 fedora 1.8 MiB perl-Text-Abbrev noarch 0:1.02-525.fc44 updates 3.1 KiB perl-Text-Balanced noarch 0:2.07-2.fc44 fedora 111.5 KiB perl-Text-Diff noarch 0:1.45-25.fc44 fedora 83.0 KiB perl-Text-Glob noarch 0:0.11-27.fc44 fedora 8.4 KiB perl-Text-ParseWords noarch 0:3.31-521.fc44 fedora 13.6 KiB perl-Text-Tabs+Wrap noarch 0:2024.001-521.fc44 fedora 22.6 KiB perl-Text-Template noarch 0:1.61-9.fc44 fedora 112.4 KiB perl-Thread noarch 0:3.06-525.fc44 updates 12.1 KiB perl-Thread-Queue noarch 0:3.14-521.fc44 fedora 28.9 KiB perl-Thread-Semaphore noarch 0:2.13-525.fc44 updates 10.0 KiB perl-Tie noarch 0:4.6-525.fc44 updates 32.1 KiB perl-Tie-File noarch 0:1.10-525.fc44 updates 85.6 KiB perl-Tie-Memoize noarch 0:1.1-525.fc44 updates 6.2 KiB perl-Tie-RefHash noarch 0:1.41-521.fc44 fedora 35.9 KiB perl-Time noarch 0:1.04-525.fc44 updates 9.8 KiB perl-Time-HiRes aarch64 4:1.9778-521.fc44 fedora 151.6 KiB perl-Time-Local noarch 2:1.350-521.fc44 fedora 69.0 KiB perl-Time-Piece aarch64 0:1.3600-525.fc44 updates 111.1 KiB perl-URI noarch 0:5.36-1.fc44 updates 275.7 KiB perl-Unicode-Collate aarch64 0:1.31-521.fc44 fedora 4.3 MiB perl-Unicode-Normalize aarch64 0:1.32-521.fc44 fedora 524.4 KiB perl-Unicode-UCD noarch 0:0.81-525.fc44 updates 206.4 KiB perl-User-pwent noarch 0:1.05-525.fc44 updates 17.1 KiB perl-autodie noarch 0:2.37-522.fc44 fedora 214.9 KiB perl-autouse noarch 0:1.11-525.fc44 updates 5.9 KiB perl-base noarch 0:2.27-525.fc44 updates 12.6 KiB perl-bignum noarch 0:0.67-522.fc44 fedora 133.1 KiB perl-blib noarch 0:1.07-525.fc44 updates 3.2 KiB perl-constant noarch 0:1.33-522.fc44 fedora 26.2 KiB perl-debugger noarch 0:1.60-525.fc44 updates 403.2 KiB perl-deprecate noarch 0:0.04-525.fc44 updates 6.6 KiB perl-devel aarch64 4:5.42.3-525.fc44 updates 3.8 MiB perl-diagnostics noarch 0:1.40-525.fc44 updates 471.3 KiB perl-doc noarch 0:5.42.3-525.fc44 updates 11.4 MiB perl-encoding aarch64 4:3.00-521.fc44 fedora 149.5 KiB perl-encoding-warnings noarch 0:0.14-525.fc44 updates 10.1 KiB perl-experimental noarch 0:0.036-3.fc44 fedora 43.4 KiB perl-fields noarch 0:2.27-525.fc44 updates 11.9 KiB perl-filetest noarch 0:1.03-525.fc44 updates 6.4 KiB perl-if noarch 0:0.61.000-525.fc44 updates 5.8 KiB perl-inc-latest noarch 2:0.500-32.fc44 fedora 34.6 KiB perl-less noarch 0:0.03-525.fc44 updates 4.9 KiB perl-lib aarch64 0:0.65-525.fc44 updates 8.5 KiB perl-libnet noarch 0:3.15-522.fc44 fedora 289.4 KiB perl-libnetcfg noarch 4:5.42.3-525.fc44 updates 16.9 KiB perl-libs aarch64 4:5.42.3-525.fc44 updates 11.6 MiB perl-local-lib noarch 0:2.000029-11.fc44 fedora 117.6 KiB perl-locale noarch 0:1.13-525.fc44 updates 6.1 KiB perl-macros noarch 4:5.42.3-525.fc44 updates 5.5 KiB perl-meta-notation noarch 0:5.42.3-525.fc44 updates 2.0 KiB perl-mro aarch64 0:1.29-525.fc44 updates 81.5 KiB perl-open noarch 0:1.13-525.fc44 updates 11.3 KiB perl-overload noarch 0:1.40-525.fc44 updates 71.6 KiB perl-overloading noarch 0:0.02-525.fc44 updates 4.9 KiB perl-parent noarch 1:0.244-521.fc44 fedora 10.3 KiB perl-perlfaq noarch 0:5.20250619-521.fc44 fedora 733.6 KiB perl-ph aarch64 0:5.42.3-525.fc44 updates 206.4 KiB perl-podlators noarch 1:6.0.2-521.fc44 fedora 317.5 KiB perl-sigtrap noarch 0:1.10-525.fc44 updates 11.1 KiB perl-sort noarch 0:2.06-525.fc44 updates 4.8 KiB perl-subs noarch 0:1.04-525.fc44 updates 2.1 KiB perl-threads aarch64 1:2.43-521.fc44 fedora 134.9 KiB perl-threads-shared aarch64 0:1.70-521.fc44 fedora 103.5 KiB perl-utils noarch 0:5.42.3-525.fc44 updates 97.0 KiB perl-vars noarch 0:1.05-525.fc44 updates 3.9 KiB perl-version aarch64 9:0.99.33-522.fc44 fedora 160.6 KiB perl-vmsish noarch 0:1.04-525.fc44 updates 6.6 KiB pixman aarch64 0:0.46.2-3.fc44 fedora 654.3 KiB publicsuffix-list noarch 0:20260116-1.fc44 fedora 342.2 KiB python-pip-wheel noarch 0:26.0.1-3.fc44 updates 1.2 MiB python3 aarch64 0:3.14.7-1.fc44 updates 84.8 KiB python3-libs aarch64 0:3.14.7-1.fc44 updates 45.6 MiB python3-pyparsing noarch 0:3.1.2-15.fc44 fedora 1.0 MiB rav1e-libs aarch64 0:0.8.1-3.fc44 fedora 2.1 MiB rhash aarch64 0:1.4.5-4.fc44 fedora 394.5 KiB shared-mime-info aarch64 0:2.4-3.fc44 fedora 5.3 MiB snappy aarch64 0:1.2.2-4.fc44 fedora 83.6 KiB svt-av1-libs aarch64 0:3.1.2-2.fc44 fedora 3.4 MiB systemtap-sdt-devel aarch64 0:5.5-2.fc44 updates 184.5 KiB systemtap-sdt-dtrace aarch64 0:5.5-2.fc44 updates 181.1 KiB tzdata noarch 0:2026c-2.fc44 updates 1.2 MiB urw-base35-bookman-fonts noarch 0:20200910-27.fc44 fedora 1.4 MiB urw-base35-c059-fonts noarch 0:20200910-27.fc44 fedora 1.4 MiB urw-base35-d050000l-fonts noarch 0:20200910-27.fc44 fedora 84.3 KiB urw-base35-fonts noarch 0:20200910-27.fc44 fedora 5.3 KiB urw-base35-fonts-common noarch 0:20200910-27.fc44 fedora 37.4 KiB urw-base35-gothic-fonts noarch 0:20200910-27.fc44 fedora 1.2 MiB urw-base35-nimbus-mono-ps-fonts noarch 0:20200910-27.fc44 fedora 1.0 MiB urw-base35-nimbus-roman-fonts noarch 0:20200910-27.fc44 fedora 1.4 MiB urw-base35-nimbus-sans-fonts noarch 0:20200910-27.fc44 fedora 2.4 MiB urw-base35-p052-fonts noarch 0:20200910-27.fc44 fedora 1.5 MiB urw-base35-standard-symbols-ps-fonts noarch 0:20200910-27.fc44 fedora 64.9 KiB urw-base35-z003-fonts noarch 0:20200910-27.fc44 fedora 390.8 KiB vim-filesystem noarch 2:9.2.1119-1.fc44 updates 40.0 B xml-common noarch 0:0.6.3-68.fc44 fedora 78.4 KiB Transaction Summary: Installing: 398 packages Total size of inbound packages is 210 MiB. Need to download 207 MiB. After this operation, 704 MiB extra will be used (install 704 MiB, remove 0 B). [ 1/398] autoconf-0:2.72-10.fc44.noarc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 2/398] automake-0:1.18.1-4.fc44.noar 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 3/398] libtool-0:2.5.4-10.fc44.aarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 4/398] make-1:4.4.1-12.fc44.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 5/398] perl-Getopt-Tabular-0:0.3-33. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 6/398] perl-MNI-0:0.08-1.20110321git 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 7/398] zlib-ng-compat-devel-0:2.3.3- 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 8/398] netcdf-devel-0:4.9.3-2.fc44.a 100% | 7.8 MiB/s | 104.3 KiB | 00m00s [ 9/398] bicpl-devel-0:2.0.0-2.2026010 100% | 1.4 MiB/s | 38.4 KiB | 00m00s [ 10/398] libminc-devel-0:2.4.03-31.fc4 100% | 15.4 MiB/s | 78.7 KiB | 00m00s [ 11/398] perl-interpreter-4:5.42.3-525 100% | 10.0 MiB/s | 71.8 KiB | 00m00s [ 12/398] emacs-filesystem-1:30.2-2.fc4 100% | 2.6 MiB/s | 8.0 KiB | 00m00s [ 13/398] m4-0:1.4.21-1.fc44.aarch64 100% | 55.5 MiB/s | 341.0 KiB | 00m00s [ 14/398] perl-Carp-0:1.54-521.fc44.noa 100% | 5.6 MiB/s | 28.8 KiB | 00m00s [ 15/398] perl-Exporter-0:5.79-521.fc44 100% | 6.0 MiB/s | 30.8 KiB | 00m00s [ 16/398] perl-File-Temp-1:0.231.200-2. 100% | 19.4 MiB/s | 59.6 KiB | 00m00s [ 17/398] perl-Getopt-Long-1:2.58-521.f 100% | 15.5 MiB/s | 63.6 KiB | 00m00s [ 18/398] perl-PathTools-0:3.94-521.fc4 100% | 21.3 MiB/s | 87.2 KiB | 00m00s [ 19/398] perl-Text-ParseWords-0:3.31-5 100% | 4.0 MiB/s | 16.5 KiB | 00m00s [ 20/398] perl-constant-0:1.33-522.fc44 100% | 2.0 MiB/s | 22.9 KiB | 00m00s [ 21/398] perl-File-Path-0:2.18-522.fc4 100% | 8.6 MiB/s | 35.3 KiB | 00m00s [ 22/398] perl-Thread-Queue-0:3.14-521. 100% | 3.0 MiB/s | 21.3 KiB | 00m00s [ 23/398] perl-threads-1:2.43-521.fc44. 100% | 9.2 MiB/s | 56.8 KiB | 00m00s [ 24/398] gcc-c++-0:16.2.1-2.fc44.aarch 100% | 139.6 MiB/s | 15.9 MiB | 00m00s [ 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00m00s [345/398] perl-sort-0:2.06-525.fc44.noa 100% | 1.7 MiB/s | 12.5 KiB | 00m00s [346/398] krb5-devel-0:1.22.2-4.fc44.aa 100% | 23.3 MiB/s | 143.4 KiB | 00m00s [347/398] libkadm5-0:1.22.2-4.fc44.aarc 100% | 15.3 MiB/s | 78.2 KiB | 00m00s [348/398] keyutils-libs-devel-0:1.6.3-7 100% | 19.4 MiB/s | 59.7 KiB | 00m00s [349/398] libcom_err-devel-0:1.47.3-4.f 100% | 4.1 MiB/s | 16.8 KiB | 00m00s [350/398] perl-doc-0:5.42.3-525.fc44.no 100% | 109.4 MiB/s | 5.0 MiB | 00m00s [351/398] libverto-devel-0:0.3.2-12.fc4 100% | 2.0 MiB/s | 14.4 KiB | 00m00s [352/398] libnghttp2-devel-0:1.68.0-5.f 100% | 7.5 MiB/s | 53.8 KiB | 00m00s [353/398] libnghttp3-devel-0:1.18.0-1.f 100% | 13.6 MiB/s | 27.8 KiB | 00m00s [354/398] ngtcp2-crypto-ossl-devel-0:1. 100% | 5.5 MiB/s | 11.3 KiB | 00m00s [355/398] libssh-devel-0:0.12.2-1.fc44. 100% | 15.4 MiB/s | 47.2 KiB | 00m00s [356/398] libselinux-devel-0:3.11-2.fc4 100% | 49.3 MiB/s | 151.3 KiB | 00m00s [357/398] ngtcp2-devel-0:1.22.1-1.fc44. 100% | 9.4 MiB/s | 48.3 KiB | 00m00s [358/398] libsepol-devel-0:3.11-1.fc44. 100% | 7.8 MiB/s | 48.1 KiB | 00m00s [359/398] pcre2-devel-0:10.47-1.fc44.1. 100% | 59.8 MiB/s | 550.9 KiB | 00m00s [360/398] pcre2-utf32-0:10.47-1.fc44.1. 100% | 35.7 MiB/s | 219.5 KiB | 00m00s [361/398] openssl-devel-1:3.5.8-1.fc44. 100% | 126.7 MiB/s | 3.0 MiB | 00m00s [362/398] pcre2-utf16-0:10.47-1.fc44.1. 100% | 15.0 MiB/s | 230.2 KiB | 00m00s [363/398] libmpc-0:1.4.1-1.fc44.aarch64 100% | 18.0 MiB/s | 73.7 KiB | 00m00s [364/398] kernel-headers-0:7.2.4-200.fc 100% | 143.0 MiB/s | 1.7 MiB | 00m00s [365/398] libasan-0:16.2.1-2.fc44.aarch 100% | 63.0 MiB/s | 515.8 KiB | 00m00s [366/398] libubsan-0:16.2.1-2.fc44.aarc 100% | 37.1 MiB/s | 227.9 KiB | 00m00s [367/398] gdk-pixbuf2-0:2.44.6^really2. 100% | 94.9 MiB/s | 485.9 KiB | 00m00s [368/398] LibRaw-0:0.22.2-1.fc44.aarch6 100% | 50.0 MiB/s | 460.4 KiB | 00m00s [369/398] shared-mime-info-0:2.4-3.fc44 100% | 55.0 MiB/s | 394.6 KiB | 00m00s [370/398] graphviz-libs-0:14.1.4-2.fc44 100% | 73.5 MiB/s | 451.7 KiB | 00m00s [371/398] libjxl-1:0.11.2-1.fc44.aarch6 100% | 104.0 MiB/s | 851.8 KiB | 00m00s [372/398] highway-0:1.3.0-2.fc44.aarch6 100% | 24.3 MiB/s | 174.0 KiB | 00m00s [373/398] librsvg2-0:2.62.3-1.fc44.aarc 100% | 177.6 MiB/s | 1.8 MiB | 00m00s [374/398] cairo-gobject-0:1.18.4-6.fc44 100% | 2.8 MiB/s | 17.0 KiB | 00m00s [375/398] libwmf-lite-0:0.2.16-1.fc44.a 100% | 12.1 MiB/s | 74.4 KiB | 00m00s [376/398] python3-0:3.14.7-1.fc44.aarch 100% | 9.5 MiB/s | 29.3 KiB | 00m00s [377/398] mpdecimal-0:4.0.1-3.fc44.aarc 100% | 15.5 MiB/s | 95.4 KiB | 00m00s [378/398] tzdata-0:2026c-2.fc44.noarch 100% | 139.0 MiB/s | 711.9 KiB | 00m00s [379/398] python-pip-wheel-0:26.0.1-3.f 100% | 76.6 MiB/s | 1.1 MiB | 00m00s [380/398] libdav1d-0:1.5.4-1.fc44.aarch 100% | 46.2 MiB/s | 378.6 KiB | 00m00s [381/398] glycin-libs-0:2.1.5-1.fc44.aa 100% | 165.0 MiB/s | 1.5 MiB | 00m00s [382/398] glycin-loaders-0:2.1.5-1.fc44 100% | 160.7 MiB/s | 3.1 MiB | 00m00s [383/398] bubblewrap-0:0.12.0-1.fc44.aa 100% | 4.6 MiB/s | 65.4 KiB | 00m00s [384/398] libheif-0:1.23.4-6.fc44.aarch 100% | 81.5 MiB/s | 751.5 KiB | 00m00s [385/398] libopenjph-0:0.25.3-3.fc44.aa 100% | 11.1 MiB/s | 113.8 KiB | 00m00s [386/398] python3-libs-0:3.14.7-1.fc44. 100% | 145.5 MiB/s | 9.9 MiB | 00m00s [387/398] rav1e-libs-0:0.8.1-3.fc44.aar 100% | 47.8 MiB/s | 832.8 KiB | 00m00s [388/398] noopenh264-0:2.6.0-4.fc44.aar 100% | 1.1 MiB/s | 22.1 KiB | 00m00s [389/398] svt-av1-libs-0:3.1.2-2.fc44.a 100% | 187.2 MiB/s | 1.3 MiB | 00m00s [390/398] libseccomp-0:2.6.1-2.fc44.aar 100% | 14.8 MiB/s | 75.6 KiB | 00m00s [391/398] libaom-0:3.13.3-1.fc44.aarch6 100% | 148.9 MiB/s | 1.6 MiB | 00m00s [392/398] libtirpc-0:1.3.8-0.fc44.aarch 100% | 15.2 MiB/s | 93.4 KiB | 00m00s [393/398] hdf-libs-0:4.3.0-5.fc44.aarch 100% | 38.7 MiB/s | 277.7 KiB | 00m00s [394/398] cmake-rpm-macros-0:4.3.0-1.fc 100% | 4.5 MiB/s | 13.8 KiB | 00m00s [395/398] gcc-plugin-annobin-0:16.2.1-2 100% | 14.2 MiB/s | 58.3 KiB | 00m00s [396/398] ninja-build-0:1.13.2-2.fc44.a 100% | 44.7 MiB/s | 183.3 KiB | 00m00s [397/398] annobin-docs-0:13.14-1.fc44.n 100% | 16.9 MiB/s | 86.7 KiB | 00m00s [398/398] annobin-plugin-gcc-0:13.14-1. 100% | 83.5 MiB/s | 684.0 KiB | 00m00s -------------------------------------------------------------------------------- [398/398] Total 100% | 170.9 MiB/s | 206.6 MiB | 00m01s Running transaction [ 1/400] Verify package files 100% | 574.0 B/s | 398.0 B | 00m01s [ 2/400] Prepare transaction 100% | 1.9 KiB/s | 398.0 B | 00m00s [ 3/400] Installing glib2-0:2.88.3-1.f 100% | 239.6 MiB/s | 15.8 MiB | 00m00s [ 4/400] Installing libjpeg-turbo-0:3. 100% | 221.2 MiB/s | 679.4 KiB | 00m00s [ 5/400] Installing cmake-filesystem-0 100% | 3.0 MiB/s | 9.4 KiB | 00m00s [ 6/400] Installing fonts-filesystem-1 100% | 0.0 B/s | 788.0 B | 00m00s [ 7/400] Installing urw-base35-fonts-c 100% | 37.5 MiB/s | 38.4 KiB | 00m00s [ 8/400] Installing libmpc-0:1.4.1-1.f 100% | 213.4 MiB/s | 218.5 KiB | 00m00s [ 9/400] 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[187/400] Installing perl-Pod-Perldoc-0 100% | 9.2 MiB/s | 169.2 KiB | 00m00s [188/400] Installing perl-SelectSaver-0 100% | 0.0 B/s | 2.6 KiB | 00m00s [189/400] Installing perl-File-stat-0:1 100% | 0.0 B/s | 13.1 KiB | 00m00s [190/400] Installing perl-Symbol-0:1.09 100% | 0.0 B/s | 7.3 KiB | 00m00s [191/400] Installing perl-Socket-4:2.04 100% | 144.4 MiB/s | 147.8 KiB | 00m00s [192/400] Installing perl-Pod-Usage-4:2 100% | 5.0 MiB/s | 87.9 KiB | 00m00s [193/400] Installing perl-IO-0:1.55-525 100% | 95.5 MiB/s | 195.6 KiB | 00m00s [194/400] Installing perl-overloading-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [195/400] Installing perl-mro-0:1.29-52 100% | 80.7 MiB/s | 82.6 KiB | 00m00s [196/400] Installing perl-base-0:2.27-5 100% | 0.0 B/s | 13.0 KiB | 00m00s [197/400] Installing perl-Fcntl-0:1.20- 100% | 91.6 MiB/s | 93.8 KiB | 00m00s [198/400] Installing perl-Text-ParseWor 100% | 14.2 MiB/s | 14.6 KiB | 00m00s [199/400] Installing perl-Getopt-Long-1 100% | 71.9 MiB/s | 147.2 KiB | 00m00s 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00m00s [213/400] Installing perl-Exporter-0:5. 100% | 54.3 MiB/s | 55.6 KiB | 00m00s [214/400] Installing perl-Carp-0:1.54-5 100% | 23.3 MiB/s | 47.7 KiB | 00m00s [215/400] Installing perl-libs-4:5.42.3 100% | 202.6 MiB/s | 11.7 MiB | 00m00s [216/400] Installing perl-interpreter-4 100% | 10.1 MiB/s | 176.5 KiB | 00m00s [217/400] Installing perl-File-Find-0:1 100% | 41.5 MiB/s | 42.5 KiB | 00m00s [218/400] Installing perl-version-9:0.9 100% | 79.8 MiB/s | 163.4 KiB | 00m00s [219/400] Installing perl-File-Copy-0:2 100% | 0.0 B/s | 20.2 KiB | 00m00s [220/400] Installing perl-threads-1:2.4 100% | 133.8 MiB/s | 137.0 KiB | 00m00s [221/400] Installing perl-threads-share 100% | 103.3 MiB/s | 105.8 KiB | 00m00s [222/400] Installing perl-ExtUtils-Mani 100% | 84.3 MiB/s | 86.3 KiB | 00m00s [223/400] Installing perl-File-Compare- 100% | 0.0 B/s | 6.2 KiB | 00m00s [224/400] Installing perl-Compress-Raw- 100% | 83.4 MiB/s | 170.8 KiB | 00m00s [225/400] Installing perl-lib-0:0.65-52 100% | 0.0 B/s | 8.9 KiB | 00m00s [226/400] Installing perl-CPAN-Meta-Req 100% | 83.0 MiB/s | 85.0 KiB | 00m00s [227/400] Installing perl-Module-Metada 100% | 67.4 MiB/s | 69.0 KiB | 00m00s [228/400] Installing perl-Module-CoreLi 100% | 434.9 MiB/s | 1.3 MiB | 00m00s [229/400] Installing perl-Digest-SHA-1: 100% | 8.0 MiB/s | 138.9 KiB | 00m00s [230/400] Installing perl-Filter-2:1.65 100% | 91.2 MiB/s | 373.7 KiB | 00m00s [231/400] Installing perl-Module-Load-1 100% | 15.5 MiB/s | 15.9 KiB | 00m00s [232/400] Installing perl-Perl-OSType-0 100% | 33.5 MiB/s | 34.3 KiB | 00m00s [233/400] Installing perl-Sys-Hostname- 100% | 71.5 MiB/s | 73.2 KiB | 00m00s [234/400] Installing perl-Tie-0:4.6-525 100% | 33.1 MiB/s | 33.9 KiB | 00m00s [235/400] Installing perl-Term-ReadLine 100% | 0.0 B/s | 17.9 KiB | 00m00s [236/400] Installing perl-meta-notation 100% | 0.0 B/s | 2.3 KiB | 00m00s [237/400] Installing perl-encoding-4:3. 100% | 146.9 MiB/s | 150.4 KiB | 00m00s [238/400] Installing perl-Thread-Queue- 100% | 29.7 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perl-Test-Harness- 100% | 23.7 MiB/s | 583.6 KiB | 00m00s [252/400] Installing perl-Math-Complex- 100% | 84.0 MiB/s | 86.0 KiB | 00m00s [253/400] Installing perl-Math-BigInt-1 100% | 266.0 MiB/s | 1.1 MiB | 00m00s [254/400] Installing perl-JSON-PP-1:4.1 100% | 8.2 MiB/s | 143.6 KiB | 00m00s [255/400] Installing perl-CPAN-Meta-0:2 100% | 86.1 MiB/s | 617.1 KiB | 00m00s [256/400] Installing perl-I18N-LangTags 100% | 81.8 MiB/s | 83.8 KiB | 00m00s [257/400] Installing perl-Locale-Makete 100% | 169.9 MiB/s | 173.9 KiB | 00m00s [258/400] Installing perl-Locale-Makete 100% | 0.0 B/s | 13.5 KiB | 00m00s [259/400] Installing perl-Params-Check- 100% | 27.9 MiB/s | 28.6 KiB | 00m00s [260/400] Installing perl-Module-Load-C 100% | 29.2 MiB/s | 29.9 KiB | 00m00s [261/400] Installing perl-IPC-Cmd-2:1.0 100% | 83.9 MiB/s | 85.9 KiB | 00m00s [262/400] Installing perl-Compress-Raw- 100% | 104.7 MiB/s | 107.2 KiB | 00m00s [263/400] Installing perl-IO-Compress-0 100% | 47.9 MiB/s | 1.1 MiB | 00m00s 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Installing perl-ExtUtils-Pars 100% | 35.1 MiB/s | 718.5 KiB | 00m00s [278/400] Installing perl-ExtUtils-Make 100% | 34.9 MiB/s | 750.3 KiB | 00m00s [279/400] Installing perl-ExtUtils-Inst 100% | 85.1 MiB/s | 87.2 KiB | 00m00s [280/400] Installing perl-devel-4:5.42. 100% | 136.0 MiB/s | 3.8 MiB | 00m00s [281/400] Installing perl-ExtUtils-Embe 100% | 0.0 B/s | 16.1 KiB | 00m00s [282/400] Installing perl-NDBM_File-0:1 100% | 71.8 MiB/s | 73.5 KiB | 00m00s [283/400] Installing perl-SelfLoader-0: 100% | 0.0 B/s | 22.6 KiB | 00m00s [284/400] Installing perl-Devel-SelfStu 100% | 0.0 B/s | 7.3 KiB | 00m00s [285/400] Installing perl-Memoize-0:1.1 100% | 65.2 MiB/s | 66.8 KiB | 00m00s [286/400] Installing perl-ExtUtils-Mini 100% | 0.0 B/s | 8.8 KiB | 00m00s [287/400] Installing perl-inc-latest-2: 100% | 35.5 MiB/s | 36.3 KiB | 00m00s [288/400] Installing perl-libnetcfg-4:5 100% | 1.1 MiB/s | 17.3 KiB | 00m00s [289/400] Installing perl-DBM_Filter-0: 100% | 30.0 MiB/s | 30.7 KiB | 00m00s [290/400] Installing perl-File-Fetch-0: 100% | 29.9 MiB/s | 61.3 KiB | 00m00s [291/400] Installing perl-Test-Simple-3 100% | 91.1 MiB/s | 1.8 MiB | 00m00s [292/400] Installing perl-Math-BigInt-F 100% | 46.3 MiB/s | 94.8 KiB | 00m00s [293/400] Installing perl-bignum-0:0.67 100% | 66.6 MiB/s | 136.5 KiB | 00m00s [294/400] Installing perl-Data-OptList- 100% | 51.0 MiB/s | 52.2 KiB | 00m00s [295/400] Installing perl-Filter-Simple 100% | 50.5 MiB/s | 51.7 KiB | 00m00s [296/400] Installing perl-open-0:1.13-5 100% | 0.0 B/s | 11.7 KiB | 00m00s [297/400] Installing perl-debugger-0:1. 100% | 394.8 MiB/s | 404.3 KiB | 00m00s [298/400] Installing perl-sigtrap-0:1.1 100% | 0.0 B/s | 11.5 KiB | 00m00s [299/400] Installing perl-Env-0:1.06-52 100% | 26.6 MiB/s | 27.2 KiB | 00m00s [300/400] Installing perl-Module-CoreLi 100% | 1.1 MiB/s | 19.3 KiB | 00m00s [301/400] Installing perl-Archive-Zip-0 100% | 15.3 MiB/s | 297.8 KiB | 00m00s [302/400] Installing perl-Thread-0:3.06 100% | 0.0 B/s | 12.5 KiB | 00m00s [303/400] Installing perl-Thread-Semaph 100% | 0.0 B/s | 10.6 KiB | 00m00s [304/400] Installing perl-experimental- 100% | 43.8 MiB/s | 44.8 KiB | 00m00s [305/400] Installing perl-Encode-devel- 100% | 5.8 MiB/s | 101.1 KiB | 00m00s [306/400] Installing perl-diagnostics-0 100% | 25.6 MiB/s | 472.4 KiB | 00m00s [307/400] Installing perl-utils-0:5.42. 100% | 5.7 MiB/s | 98.6 KiB | 00m00s [308/400] Installing perl-Pod-Checker-4 100% | 3.1 MiB/s | 53.5 KiB | 00m00s [309/400] Installing perl-macros-4:5.42 100% | 0.0 B/s | 5.8 KiB | 00m00s [310/400] Installing perl-Pod-Functions 100% | 0.0 B/s | 14.8 KiB | 00m00s [311/400] Installing perl-ph-0:5.42.3-5 100% | 103.3 MiB/s | 211.5 KiB | 00m00s [312/400] Installing perl-Config-Perl-V 100% | 27.0 MiB/s | 27.6 KiB | 00m00s [313/400] Installing perl-DB_File-0:1.8 100% | 99.3 MiB/s | 203.3 KiB | 00m00s [314/400] Installing perl-IPC-SysV-0:2. 100% | 113.8 MiB/s | 116.6 KiB | 00m00s [315/400] Installing perl-PerlIO-via-Qu 100% | 31.4 MiB/s | 32.1 KiB | 00m00s [316/400] Installing perl-Sys-Syslog-0: 100% | 70.7 MiB/s | 144.8 KiB | 00m00s [317/400] Installing perl-Unicode-Colla 100% | 308.2 MiB/s | 4.3 MiB | 00m00s [318/400] Installing perl-perlfaq-0:5.2 100% | 240.2 MiB/s | 737.9 KiB | 00m00s [319/400] Installing perl-Compress-Bzip 100% | 72.9 MiB/s | 149.2 KiB | 00m00s [320/400] Installing perl-Devel-Size-0: 100% | 93.6 MiB/s | 95.8 KiB | 00m00s [321/400] Installing perl-Text-Glob-0:0 100% | 9.1 MiB/s | 9.3 KiB | 00m00s [322/400] Installing perl-local-lib-0:2 100% | 58.8 MiB/s | 120.4 KiB | 00m00s [323/400] Installing perl-IPC-System-Si 100% | 71.8 MiB/s | 73.5 KiB | 00m00s [324/400] Installing perl-autodie-0:2.3 100% | 107.0 MiB/s | 219.1 KiB | 00m00s [325/400] Installing perl-File-Which-0: 100% | 30.7 MiB/s | 31.4 KiB | 00m00s [326/400] Installing perl-File-HomeDir- 100% | 24.2 MiB/s | 123.8 KiB | 00m00s [327/400] Installing perl-Text-Template 100% | 111.3 MiB/s | 114.0 KiB | 00m00s [328/400] Installing perl-Algorithm-Dif 100% | 106.9 MiB/s | 109.5 KiB | 00m00s [329/400] Installing perl-Text-Diff-0:1 100% | 83.1 MiB/s | 85.1 KiB | 00m00s [330/400] Installing perl-Module-Signat 100% | 8.0 MiB/s | 138.8 KiB | 00m00s [331/400] Installing perl-MRO-Compat-0: 100% | 43.8 MiB/s | 44.9 KiB | 00m00s [332/400] Installing perl-Package-Gener 100% | 30.8 MiB/s | 31.5 KiB | 00m00s [333/400] Installing perl-Sub-Exporter- 100% | 65.7 MiB/s | 201.9 KiB | 00m00s [334/400] Installing perl-Data-Section- 100% | 43.0 MiB/s | 44.1 KiB | 00m00s [335/400] Installing perl-Software-Lice 100% | 125.3 MiB/s | 513.2 KiB | 00m00s [336/400] Installing perl-Module-Build- 100% | 32.4 MiB/s | 663.2 KiB | 00m00s [337/400] Installing perl-Compress-Raw- 100% | 80.3 MiB/s | 164.5 KiB | 00m00s [338/400] Installing perl-IO-Compress-L 100% | 108.5 MiB/s | 222.2 KiB | 00m00s [339/400] Installing perl-Archive-Tar-0 100% | 9.2 MiB/s | 160.3 KiB | 00m00s [340/400] Installing perl-Attribute-Han 100% | 39.6 MiB/s | 40.5 KiB | 00m00s [341/400] Installing perl-Config-Extens 100% | 0.0 B/s | 3.2 KiB | 00m00s [342/400] Installing perl-Devel-Peek-0: 100% | 90.6 MiB/s | 92.8 KiB | 00m00s [343/400] Installing perl-English-0:1.1 100% | 0.0 B/s | 6.7 KiB | 00m00s [344/400] Installing perl-File-DosGlob- 100% | 76.3 MiB/s | 78.2 KiB | 00m00s [345/400] Installing perl-FileCache-0:1 100% | 0.0 B/s | 7.9 KiB | 00m00s [346/400] Installing perl-FindBin-0:1.5 100% | 0.0 B/s | 7.2 KiB | 00m00s [347/400] Installing perl-GDBM_File-1:1 100% | 94.4 MiB/s | 96.7 KiB | 00m00s [348/400] Installing perl-I18N-Collate- 100% | 0.0 B/s | 7.6 KiB | 00m00s [349/400] Installing perl-I18N-Langinfo 100% | 86.0 MiB/s | 88.1 KiB | 00m00s [350/400] Installing perl-Module-Loaded 100% | 0.0 B/s | 5.6 KiB | 00m00s [351/400] Installing perl-NEXT-0:0.69-5 100% | 0.0 B/s | 24.0 KiB | 00m00s [352/400] Installing perl-Net-0:1.04-52 100% | 23.3 MiB/s | 23.9 KiB | 00m00s [353/400] Installing perl-ODBM_File-0:1 100% | 71.9 MiB/s | 73.6 KiB | 00m00s [354/400] Installing 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Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1790208000 Wrote: /builddir/build/SRPMS/conglomerate-1.6.80-1.20120308git166303d.fc44.src.rpm Updating and loading repositories: updates 100% | 28.0 KiB/s | 9.3 KiB | 00m00s fedora 100% | 31.5 KiB/s | 10.5 KiB | 00m00s Copr repository 100% | 102.1 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package "autoconf-2.72-10.fc44.noarch" is already installed. Package "automake-1.18.1-4.fc44.noarch" is already installed. Package "bicpl-devel-2.0.0-2.20260106git8be98a9.fc44.aarch64" is already installed. Package "gcc-16.2.1-2.fc44.aarch64" is already installed. Package "gcc-c++-16.2.1-2.fc44.aarch64" is already installed. Package "libminc-devel-2.4.03-31.fc44.aarch64" is already installed. Package "libtool-2.5.4-10.fc44.aarch64" is already installed. Package "make-1:4.4.1-12.fc44.aarch64" is already installed. Package "netcdf-devel-4.9.3-2.fc44.aarch64" is already installed. Package "perl-Getopt-Tabular-0.3-33.fc44.noarch" is already installed. Package "perl-MNI-0.08-1.20110321git075ae53.fc44.noarch" is already installed. Package "perl-interpreter-4:5.42.3-525.fc44.aarch64" is already installed. Package "zlib-ng-compat-devel-2.3.3-3.fc44.aarch64" is already installed. Nothing to do. Finish: build setup for conglomerate-1.6.80-1.20120308git166303d.fc44.src.rpm Start: rpmbuild conglomerate-1.6.80-1.20120308git166303d.fc44.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1790208000 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.OEkDRc Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.4uqXz1 + umask 022 + cd /builddir/build/BUILD/conglomerate-1.6.80-build + cd /builddir/build/BUILD/conglomerate-1.6.80-build + rm -rf conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/conglomerate-166303d.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + mkdir -p m4 + tar -xf /builddir/build/SOURCES/mni-acmacros.tar.gz --strip-components=1 -C m4 + test -f m4/smr_WITH_BUILD_PATH.m4 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.005dka + umask 022 + cd /builddir/build/BUILD/conglomerate-1.6.80-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b + sed -i 's/^dnl AC_PROG_CXX$/AC_PROG_CXX/' configure.ac + grep -q '^AC_PROG_CXX$' configure.ac + autoreconf -ifv -I m4 autoreconf: export WARNINGS= autoreconf: Entering directory '.' autoreconf: configure.ac: not using Gettext autoreconf: running: aclocal -I m4 --force -I m4 autoreconf: configure.ac: tracing autoreconf: running: libtoolize --copy --force libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac, libtoolize: and rerunning libtoolize and aclocal. autoreconf: configure.ac: not using Intltool autoreconf: configure.ac: not using Gtkdoc autoreconf: configure.ac: not needing autopoint autoreconf: running: aclocal -I m4 --force -I m4 autoreconf: running: /usr/bin/autoconf --include=m4 --force configure.ac:19: warning: The macro 'AC_PROG_LIBTOOL' is obsolete. configure.ac:19: You should run autoupdate. m4/libtool.m4:100: AC_PROG_LIBTOOL is expanded from... configure.ac:19: the top level configure.ac:21: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:21: You should run autoupdate. ./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from... m4/mni_REQUIRE_LIB.m4:7: mni_REQUIRE_LIB is expanded from... m4/mni_REQUIRE_MNILIBS.m4:1: mni_REQUIRE_MINC is expanded from... m4/mni_REQUIRE_MNILIBS.m4:21: mni_REQUIRE_VOLUMEIO is expanded from... m4/mni_REQUIRE_MNILIBS.m4:39: mni_REQUIRE_BICPL is expanded from... configure.ac:21: the top level configure.ac:21: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:21: You should run autoupdate. ./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from... m4/mni_REQUIRE_LIB.m4:7: mni_REQUIRE_LIB is expanded from... m4/mni_REQUIRE_MNILIBS.m4:21: mni_REQUIRE_VOLUMEIO is expanded from... m4/mni_REQUIRE_MNILIBS.m4:39: mni_REQUIRE_BICPL is expanded from... configure.ac:21: the top level configure.ac:21: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:21: You should run autoupdate. ./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from... m4/mni_REQUIRE_LIB.m4:7: mni_REQUIRE_LIB is expanded from... m4/mni_REQUIRE_MNILIBS.m4:39: mni_REQUIRE_BICPL is expanded from... configure.ac:21: the top level configure.ac:24: warning: AC_OUTPUT should be used without arguments. configure.ac:24: You should run autoupdate. autoreconf: running: /usr/bin/autoheader --include=m4 --force autoreconf: running: automake --add-missing --copy --force-missing configure.ac:14: installing './compile' configure.ac:19: installing './config.guess' configure.ac:19: installing './config.sub' configure.ac:5: installing './install-sh' configure.ac:5: installing './missing' Makefile.am: installing './INSTALL' Makefile.am: installing './depcomp' autoreconf: Leaving directory '.' + sed -i s/volume_io2/minc_io/g configure + grep -q minc_io configure + cp /builddir/build/SOURCES/mni-volume-io-compat.h compat_minc.h + mkdir -p compat/volume_io + cat ++ pwd ++ pwd + export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS' ++ pwd ++ pwd + export 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + '[' '-flto=auto -ffat-lto-objectsx' '!=' x ']' ++ find . -type f -name configure -print + for file in $(find . -type f -name configure -print) + /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup '/lt_cv_sys_global_symbol_to_cdecl=/s#(".*"|'\''.*'\'')#"sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./configure + diff -u ./configure.backup ./configure --- ./configure.backup 2026-09-24 18:22:19.689549996 +0000 +++ ./configure 2026-09-24 18:22:19.736549616 +0000 @@ -7971,7 +7971,7 @@ # Transform an extracted symbol line into a proper C declaration. # Some systems (esp. on ia64) link data and code symbols differently, # so use this general approach. -lt_cv_sys_global_symbol_to_cdecl="$SED -n"\ +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'"\ $lt_cdecl_hook\ " -e 's/^T .* \(.*\)$/extern int \1();/p'"\ " -e 's/^$symcode$symcode* .* \(.*\)$/extern char \1;/p'" @@ -19578,7 +19578,7 @@ compiler='`$ECHO "$compiler" | $SED "$delay_single_quote_subst"`' GCC='`$ECHO "$GCC" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_pipe='`$ECHO "$lt_cv_sys_global_symbol_pipe" | $SED "$delay_single_quote_subst"`' -lt_cv_sys_global_symbol_to_cdecl='`$ECHO "$lt_cv_sys_global_symbol_to_cdecl" | $SED "$delay_single_quote_subst"`' +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'" lt_cv_sys_global_symbol_to_import='`$ECHO "$lt_cv_sys_global_symbol_to_import" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_to_c_name_address='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address_lib_prefix" | $SED "$delay_single_quote_subst"`' + '[' 1 = 1 ']' +++ dirname ./configure ++ find . -name config.guess -o -name config.sub + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./config.sub + '[' -f /usr/lib/rpm/redhat/config.sub ']' + /usr/bin/rm -f ./config.sub ++ basename ./config.sub + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./config.sub '/usr/lib/rpm/redhat/config.sub' -> './config.sub' + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./config.guess + '[' -f /usr/lib/rpm/redhat/config.guess ']' + /usr/bin/rm -f ./config.guess ++ basename ./config.guess + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./config.guess '/usr/lib/rpm/redhat/config.guess' -> './config.guess' + '[' 1 = 1 ']' + '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors' ']' ++ find . -name ltmain.sh + for i in $(find . -name ltmain.sh) + /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors"~' ./ltmain.sh ++ grep -q runstatedir=DIR ./configure ++ echo --runstatedir=/run + ./configure --build=aarch64-redhat-linux --host=aarch64-redhat-linux --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/bin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --runstatedir=/run --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --with-minc2 --with-build-path=/usr 'LIBS=-lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm' checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking whether UID '1000' is supported by ustar format... yes checking whether GID '135' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking for aarch64-redhat-linux-gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... unsupported checking for g++ option to enable C++98 features... unsupported checking dependency style of g++... none checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for float.h... yes checking build system type... aarch64-redhat-linux-gnu checking host system type... aarch64-redhat-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert aarch64-redhat-linux-gnu file names to aarch64-redhat-linux-gnu format... func_convert_file_noop checking how to convert aarch64-redhat-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for aarch64-redhat-linux-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for aarch64-redhat-linux-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for aarch64-redhat-linux-ranlib... no checking for ranlib... ranlib checking for aarch64-redhat-linux-ar... no checking for ar... ar checking for archiver @FILE support... @ checking for aarch64-redhat-linux-strip... no checking for strip... strip checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for aarch64-redhat-linux-mt... no checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... yes checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for library m... yes checking for library netcdf... yes checking for library z... yes checking for library hdf5... yes checking for library minc2... yes checking for library minc_io... yes checking for library bicpl... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating epm-header config.status: creating nlfit_smr config.status: creating mritotal_suppress config.status: creating smooth_mask config.status: creating compute_icbm_vols config.status: creating multispectral_stx_registration config.status: creating sphere_resample_obj config.status: creating suppress_fat config.status: creating regional_thickness config.status: creating remap_to_lobes config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands + /usr/bin/make -O -j4 V=1 VERBOSE=1 /usr/bin/make all-am make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o autocrop_volume.o autocrop_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o add_labels.o add_labels.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o apply_sphere_transform.o apply_sphere_transform.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o minc_labels.o minc_labels.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o average_voxels.o average_voxels.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o box_filter_volume.o box_filter_volume.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o blur_surface.o blur_surface.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ blur_surface.c: In function ‘main’: blur_surface.c:123:17: warning: ‘smooth_values’ may be used uninitialized [-Wmaybe-uninitialized] 123 | if( output_real( file, smooth_values[p] ) != OK || | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ blur_surface.c:31:61: note: ‘smooth_values’ was declared here 31 | Real fwhm, distance_ratio, *values, value, *smooth_values; | ^~~~~~~~~~~~~ blur_surface.c:104:30: warning: ‘value’ may be used uninitialized [-Wmaybe-uninitialized] 104 | smooth_values[p] = value; | ~~~~~~~~~~~~~~~~~^~~~~~~ blur_surface.c:31:53: note: ‘value’ was declared here 31 | Real fwhm, distance_ratio, *values, value, *smooth_values; | ^~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o chamfer_volume.o chamfer_volume.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o chop_tags.o chop_tags.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o box_filter_volume_nd.o box_filter_volume_nd.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o clamp_volume.o clamp_volume.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o classify_sulcus.o classify_sulcus.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o clean_surface_labels.o clean_surface_labels.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ clean_surface_labels.c: In function ‘main’: clean_surface_labels.c:59:12: warning: unused variable ‘fp’ [-Wunused-variable] 59 | FILE * fp; | ^~ clean_surface_labels.c: In function ‘get_surface_neighbours’: clean_surface_labels.c:311:3: warning: multi-line comment [-Wcomment] 311 | // /\ /\ | ^ clean_surface_labels.c: In function ‘read_scalar’: clean_surface_labels.c:369:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 369 | fscanf( fp, "%f", &val ); | ^~~~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o cluster_volume.o cluster_volume.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o clip_tags.o clip_tags.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ clip_tags.c: In function ‘main’: clip_tags.c:336:28: warning: ‘voxel_volume’ may be used uninitialized [-Wmaybe-uninitialized] 336 | volume += voxel_volume; | ~~~~~~~^~~~~~~~~~~~~~~ clip_tags.c:52:52: note: ‘voxel_volume’ was declared here 52 | Real min_dist, max_dist, dist, voxel_volume; | ^~~~~~~~~~~~ clip_tags.c:159:24: warning: ‘left_constant’ may be used uninitialized [-Wmaybe-uninitialized] 159 | plane_constants[0] = left_constant; | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ clip_tags.c:58:26: note: ‘left_constant’ was declared here 58 | Real left_constant, right_constant; | ^~~~~~~~~~~~~ clip_tags.c:161:24: warning: ‘right_constant’ may be used uninitialized [-Wmaybe-uninitialized] 161 | plane_constants[1] = right_constant; | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ clip_tags.c:58:41: note: ‘right_constant’ was declared here 58 | Real left_constant, right_constant; | ^~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o coalesce_lines.o coalesce_lines.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compare_left_right.o compare_left_right.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ compare_left_right.c: In function ‘main’: compare_left_right.c:235:20: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 235 | if( i == 0 && j == 0 || t_stat[i][j] < min_t ) | ~~~~~~~^~~~~~~~~ compare_left_right.c:237:20: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 237 | if( i == 0 && j == 0 || t_stat[i][j] > max_t ) | ~~~~~~~^~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compare_lengths.o compare_lengths.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compare_left_right_groups.o compare_left_right_groups.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ compare_left_right_groups.c: In function ‘main’: compare_left_right_groups.c:177:20: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 177 | if( i == 0 && j == 0 || t < min_t ) | ~~~~~~~^~~~~~~~~ compare_left_right_groups.c:179:25: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 179 | else if( i == 0 && j == 0 || t > max_t ) | ~~~~~~~^~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o composite_images.o composite_images.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o close_surface.o close_surface.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ close_surface.c: In function ‘label_inside_convex_hull’: close_surface.c:336:34: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 336 | if( x == 0 && y == 0 && z == 0 || voxel[c] < limits[0][c] ) | ~~~~~~~~~~~~~~~~~^~~~~~~~~ close_surface.c:340:34: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 340 | if( x == 0 && y == 0 && z == 0 || voxel[c] > limits[1][c] ) | ~~~~~~~~~~~~~~~~~^~~~~~~~~ close_surface.c: In function ‘print_convex_boundaries’: close_surface.c:881:43: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 881 | n_voxels == prev_max && i > prev_pos) ) | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o composite_minc_images.o composite_minc_images.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ composite_minc_images.c: In function ‘main’: composite_minc_images.c:32:41: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 32 | !equal_strings( method, "add" ) && | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ 33 | !equal_strings( method, "composite" ) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compute_bounding_view.o compute_bounding_view.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o composite_volumes.o composite_volumes.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ composite_volumes.c: In function ‘main’: composite_volumes.c:199:12: warning: ‘rgb_volume’ may be used uninitialized [-Wmaybe-uninitialized] 199 | (void) output_volume( output_filename, NC_UNSPECIFIED, FALSE, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | 0.0, 0.0, | ~~~~~~~~~ 201 | rgb_volume, "Composited\n", NULL ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ composite_volumes.c:17:32: note: ‘rgb_volume’ was declared here 17 | Volume volume, rgb_volume; | ^~~~~~~~~~ composite_volumes.c:68:9: warning: ‘coding_type’ may be used uninitialized [-Wmaybe-uninitialized] 68 | initialize_colour_coding( &colour_coding, coding_type, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | under_colour, over_colour, low, high ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ composite_volumes.c:32:26: note: ‘coding_type’ was declared here 32 | Colour_coding_types coding_type; | ^~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o concat_images.o concat_images.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o count_thresholded_volume.o count_thresholded_volume.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compute_resels.o compute_resels.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ In file included from /usr/include/libminc/volume_io.h:40: compute_resels.c: In function ‘main’: /usr/include/libminc/volume_io/basic.h:137:62: warning: ‘n_points’ may be used uninitialized [-Wmaybe-uninitialized] 137 | #define for_less( i, start, end ) for( (i) = (start); (i) < (end); ++(i) ) | ~~~~^~~~~~~ compute_resels.c:18:58: note: ‘n_points’ was declared here 18 | int i, n_objects, n_surfaces[2], group, n_points, s; | ^~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o contour_slice.o contour_slice.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_2d_sheet.o create_2d_sheet.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ In function ‘create_path_between_nodes’, inlined from ‘create_2d_coordinates’ at create_2d_sheet.c:162:17, inlined from ‘main’ at create_2d_sheet.c:34:5: create_2d_sheet.c:80:20: warning: ‘best_neigh’ may be used uninitialized [-Wmaybe-uninitialized] 80 | while( current != start_point ); | ~~~~~~~~^~~~~~~~~~~~~~ create_2d_sheet.c: In function ‘main’: create_2d_sheet.c:51:37: note: ‘best_neigh’ was declared here 51 | int n_path, *path, current, best_neigh, n, neigh; | ^~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_box.o create_box.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_label_map.o create_label_map.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_2d_surface.o create_2d_surface.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ create_2d_surface.c: In function ‘create_2d_coordinates’: create_2d_surface.c:284:32: warning: variable ‘dummy’ set but not used [-Wunused-but-set-variable=] 284 | Real x, y, z, dummy; | ^~~~~ In file included from /usr/include/libminc/volume_io.h:43: In function ‘create_path_between_poles’, inlined from ‘create_2d_coordinates’ at create_2d_surface.c:306:17, inlined from ‘main’ at create_2d_surface.c:37:5: /usr/include/libminc/volume_io/arrays.h:78:34: warning: ‘best_neigh’ may be used uninitialized [-Wmaybe-uninitialized] 78 | (array) [(n_elems)] = (elem_to_add); \ | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ create_2d_surface.c: In function ‘main’: create_2d_surface.c:73:37: note: ‘best_neigh’ was declared here 73 | int n_path, *path, current, best_neigh, n, neigh; | ^~~~~~~~~~ In function ‘create_2d_coordinates’, inlined from ‘main’ at create_2d_surface.c:37:5: create_2d_surface.c:407:35: warning: ‘best_hor’ may be used uninitialized [-Wmaybe-uninitialized] 407 | horizontal[point] = best_hor; | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ create_2d_surface.c: In function ‘main’: create_2d_surface.c:281:58: note: ‘best_hor’ was declared here 281 | float *distances, neigh_dist, best_dist, best_hor; | ^~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o convex_hull.o convex_hull.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ convex_hull.c: In function ‘get_convex_hull’: convex_hull.c:617:1: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 617 | if(dbg) printf( "EDGE ENTRY %d:%d for poly %d\n", poly_vertices[edge], | ^~ convex_hull.c:620:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 620 | ind = find_limit_plane( n_points, points, point_flags, | ^~~ convex_hull.c: In function ‘get_surface_neighbours’: convex_hull.c:908:3: warning: multi-line comment [-Wcomment] 908 | // /\ /\ | ^ In file included from /usr/include/libminc/volume_io.h:46: convex_hull.c: In function ‘get_plane_polygon_vertices’: /usr/include/libminc/volume_io/geom_structs.h:60:53: warning: ‘horizontal’ may be used uninitialized [-Wmaybe-uninitialized] 60 | #define Point_coord( point, coord ) ((point).coords[coord]) convex_hull.c:422:40: note: ‘horizontal’ declared here 422 | Vector v01, v02, normal, offset, horizontal, vertical; | ^~~~~~~~~~ /usr/include/libminc/volume_io/geom_structs.h:97:56: warning: ‘horizontal’ may be used uninitialized [-Wmaybe-uninitialized] 97 | #define Vector_coord( vector, coord ) ((vector).coords[coord]) convex_hull.c:422:40: note: ‘horizontal’ declared here 422 | Vector v01, v02, normal, offset, horizontal, vertical; | ^~~~~~~~~~ /usr/include/libminc/volume_io/geom_structs.h:97:56: warning: ‘horizontal’ may be used uninitialized [-Wmaybe-uninitialized] 97 | #define Vector_coord( vector, coord ) ((vector).coords[coord]) convex_hull.c:422:40: note: ‘horizontal’ declared here 422 | Vector v01, v02, normal, offset, horizontal, vertical; | ^~~~~~~~~~ /usr/include/libminc/volume_io/geometry.h:37:24: warning: ‘vertical.coords[0]’ may be used uninitialized [-Wmaybe-uninitialized] 37 | #define Real_cast(x) ((VIO_Real) (x)) | ~^~~~~~~~~~~~~~~ convex_hull.c:422:52: note: ‘vertical.coords[0]’ was declared here 422 | Vector v01, v02, normal, offset, horizontal, vertical; | ^~~~~~~~ /usr/include/libminc/volume_io/geometry.h:37:24: warning: ‘vertical.coords[1]’ may be used uninitialized [-Wmaybe-uninitialized] 37 | #define Real_cast(x) ((VIO_Real) (x)) | ~^~~~~~~~~~~~~~~ convex_hull.c:422:52: note: ‘vertical.coords[1]’ was declared here 422 | Vector v01, v02, normal, offset, horizontal, vertical; | ^~~~~~~~ /usr/include/libminc/volume_io/geometry.h:37:24: warning: ‘vertical.coords[2]’ may be used uninitialized [-Wmaybe-uninitialized] 37 | #define Real_cast(x) ((VIO_Real) (x)) | ~^~~~~~~~~~~~~~~ convex_hull.c:422:52: note: ‘vertical.coords[2]’ was declared here 422 | Vector v01, v02, normal, offset, horizontal, vertical; | ^~~~~~~~ convex_hull.c: In function ‘find_limit_plane.isra.0’: /usr/include/libminc/volume_io/geometry.h:37:24: warning: ‘horizontal.coords[0]’ may be used uninitialized [-Wmaybe-uninitialized] 37 | #define Real_cast(x) ((VIO_Real) (x)) | ~^~~~~~~~~~~~~~~ convex_hull.c:236:14: note: ‘horizontal.coords[0]’ was declared here 236 | Vector horizontal, vertical, offset; | ^~~~~~~~~~ /usr/include/libminc/volume_io/geometry.h:37:24: warning: ‘horizontal.coords[1]’ may be used uninitialized [-Wmaybe-uninitialized] 37 | #define Real_cast(x) ((VIO_Real) (x)) | ~^~~~~~~~~~~~~~~ convex_hull.c:236:14: note: ‘horizontal.coords[1]’ was declared here 236 | Vector horizontal, vertical, offset; | ^~~~~~~~~~ /usr/include/libminc/volume_io/geometry.h:37:24: warning: ‘horizontal.coords[2]’ may be used uninitialized [-Wmaybe-uninitialized] 37 | #define Real_cast(x) ((VIO_Real) (x)) | ~^~~~~~~~~~~~~~~ convex_hull.c:236:14: note: ‘horizontal.coords[2]’ was declared here 236 | Vector horizontal, vertical, offset; | ^~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_four_volumes.o create_four_volumes.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o get_filenames.o get_filenames.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_mahalanobis.o create_mahalanobis.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_landmark_full_volume.o create_landmark_full_volume.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ create_landmark_full_volume.c: In function ‘is_left_id’: create_landmark_full_volume.c:31:22: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 31 | return( id >= 10 && id <= 19 || id == 30 ); | ~~~~~~~~~^~~~~~~~~~~ create_landmark_full_volume.c: In function ‘is_right_id’: create_landmark_full_volume.c:40:22: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 40 | return( id >= 20 && id <= 29 || id == 40 ); | ~~~~~~~~~^~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_surface_interpolation_lsq.o create_surface_interpolation_lsq.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ create_surface_interpolation_lsq.c: In function ‘create_surface_interpolation’: create_surface_interpolation_lsq.c:277:30: warning: variable ‘n_edges’ set but not used [-Wunused-but-set-variable=] 277 | int neigh, n_edges; | ^~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dilate_volume.o dilate_volume.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_warping_points.o create_warping_points.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o diff_mahalanobis.o diff_mahalanobis.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ diff_mahalanobis.c: In function ‘min_function’: diff_mahalanobis.c:153:59: warning: variable ‘close’ set but not used [-Wunused-but-set-variable=] 153 | Real z1, z2, diff, deriv1[3], deriv2[3], close; | ^~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dim_image.o dim_image.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_deformation_distances.o dump_deformation_distances.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_points_to_tag_file.o dump_points_to_tag_file.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ dump_points_to_tag_file.c: In function ‘main’: dump_points_to_tag_file.c:22:31: warning: format ‘%s’ expects a matching ‘char *’ argument [-Wformat=] 22 | print_error( "Usage: %s input1.obj [input2.obj] output.txt\n" ); | ~^ | | | char * make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dilate_volume_completely.o dilate_volume_completely.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ dilate_volume_completely.c: In function ‘main’: dilate_volume_completely.c:104:62: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 104 | min_inside <= test_value && | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ 105 | test_value <= max_inside ) | ~~~~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_transform.o dump_transform.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_rms.o dump_rms.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_uv.o dump_uv.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ dump_uv.c: In function ‘main’: dump_uv.c:22:31: warning: format ‘%s’ expects a matching ‘char *’ argument [-Wformat=] 22 | print_error( "Usage: %s input.obj output.txt\n" ); | ~^ | | | char * make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o evaluate.o evaluate.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o extract_tag_slice.o extract_tag_slice.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ extract_tag_slice.c: In function ‘main’: extract_tag_slice.c:114:30: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 114 | if( !min_present && value != 0.0 || | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o fill_sulci.o fill_sulci.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o extract_largest_line.o extract_largest_line.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_image_bounding_box.o find_image_bounding_box.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_surface_distances.o find_surface_distances.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_buried_surface.o find_buried_surface.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o search_utils.o search_utils.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ search_utils.c: In function ‘contains_value’: search_utils.c:114:23: warning: ‘under_found’ may be used uninitialized [-Wmaybe-uninitialized] 114 | if( under_found ) | ^ search_utils.c:88:14: note: ‘under_found’ was declared here 88 | BOOLEAN under_found, over_found; | ^~~~~~~~~~~ search_utils.c:108:23: warning: ‘over_found’ may be used uninitialized [-Wmaybe-uninitialized] 108 | if( over_found ) | ^ search_utils.c:88:27: note: ‘over_found’ was declared here 88 | BOOLEAN under_found, over_found; | ^~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_peaks.o find_peaks.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ find_peaks.c: In function ‘check_for_peak’: find_peaks.c:753:10: warning: enumeration value ‘NEXTREMES’ not handled in switch [-Wswitch] 753 | switch (extreme) { | ^~~~~~ find_peaks.c:760:10: warning: enumeration value ‘NEXTREMES’ not handled in switch [-Wswitch] 760 | switch (extreme) { | ^~~~~~ find_peaks.c: At top level: find_peaks.c:58:13: warning: ‘rcsid’ defined but not used [-Wunused-variable] 58 | static char rcsid[]="$Header: /private-cvsroot/libraries/conglomerate/find_peaks.c,v 1.1 2004-04-22 13:15:01 bert Exp $"; | ^~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o model_objects.o model_objects.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ model_objects.c: In function ‘input_original_positions’: model_objects.c:281:7: warning: ‘n_points’ may be used uninitialized [-Wmaybe-uninitialized] 281 | if( n_points != n_deforming_points ) | ^ model_objects.c:244:37: note: ‘n_points’ was declared here 244 | int i, n_objects, n_points; | ^~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_in_direction.o find_in_direction.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ find_in_direction.c: In function ‘find_boundary_in_direction’: find_in_direction.c:431:27: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 431 | (isovalue && | ~~~~~~~~~^~ 432 | check_voxel_for_isovalue( lookup, volume, label_volume, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 | degrees_continuity, | ~~~~~~~~~~~~~~~~~~~ 434 | voxel_index0, | ~~~~~~~~~~~~~ 435 | origin0, direction0, | ~~~~~~~~~~~~~~~~~~~~ 436 | FALSE, | ~~~~~~ 437 | current_distance0, max_dist, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 | boundary_def->min_isovalue, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 | boundary_def->normal_direction, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 | found, &found_dist ) || | ~~~~~~~~~~~~~~~~~~~~ find_in_direction.c:513:27: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 513 | (isovalue && | ~~~~~~~~~^~ 514 | check_voxel_for_isovalue( lookup, volume, label_volume, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 | degrees_continuity, | ~~~~~~~~~~~~~~~~~~~ 516 | voxel_index1, | ~~~~~~~~~~~~~ 517 | origin1, direction1, | ~~~~~~~~~~~~~~~~~~~~ 518 | TRUE, | ~~~~~ 519 | current_distance1, max_dist, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 | boundary_def->min_isovalue, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 | boundary_def->normal_direction, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 | found, &found_dist ) || | ~~~~~~~~~~~~~~~~~~~~ find_in_direction.c: In function ‘check_voxel_for_isovalue’: find_in_direction.c:727:59: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 727 | if( normal_direction == TOWARDS_LOWER && dot_prod > 0.0 || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o deform_line.o deform_line.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ deform_line.c: In function ‘one_iteration_lines’: deform_line.c:59:50: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 59 | lines->end_indices[0] != lines->n_points && | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ 60 | lines->end_indices[0] != lines->n_points+1 ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o intersect_voxel.o intersect_voxel.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_tag_outliers.o find_tag_outliers.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_vertex.o find_vertex.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ find_vertex.c: In function ‘main’: find_vertex.c:12:34: warning: ‘ind’ may be used uninitialized [-Wmaybe-uninitialized] 12 | int i, n_objects, ind, n_points, best_poly, n_items; | ^~~ find_vertex.c:66:9: warning: ‘best_poly’ may be used uninitialized [-Wmaybe-uninitialized] 66 | print( "Closest polygon: %d\n", best_poly ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ find_vertex.c:12:49: note: ‘best_poly’ was declared here 12 | int i, n_objects, ind, n_points, best_poly, n_items; | ^~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_volume_centroid.o find_volume_centroid.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o models.o models.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o conjugate_min.o conjugate_min.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o conjugate_grad.o conjugate_grad.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o fit_curve.o fit_curve.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o line_minimization.o line_minimization.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ line_minimization.c: In function ‘minimize_along_line’: line_minimization.c:142:25: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 142 | if( f_next < f1 && t_next < t1 || | ~~~~~~~~~~~~^~~~~~~~~~~~~~ line_minimization.c:150:30: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 150 | else if( f_next < f1 && t_next >= t1 || | ~~~~~~~~~~~~^~~~~~~~~~~~~~~ line_minimization.c:158:30: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 158 | else if( f_next > f1 && t_next < t1 || | ~~~~~~~~~~~~^~~~~~~~~~~~~~ line_minimization.c:164:30: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 164 | else if( f_next > f1 && t_next >= t1 || | ~~~~~~~~~~~~^~~~~~~~~~~~~~~ line_minimization.c:102:7: warning: ‘t2’ may be used uninitialized [-Wmaybe-uninitialized] 102 | if( t2 < t0 ) | ^ line_minimization.c:38:30: note: ‘t2’ was declared here 38 | Real t0, t1, t2, f0, f1, f2, t_next, f_next, step, fsize; | ^~ line_minimization.c:117:39: warning: ‘f0’ may be used uninitialized [-Wmaybe-uninitialized] 117 | bottom = 2.0 * (t2*f0-t0*f2-t1*f0+t1*f2-t2*f1+t0*f1); | ~~^~~ line_minimization.c:38:34: note: ‘f0’ was declared here 38 | Real t0, t1, t2, f0, f1, f2, t_next, f_next, step, fsize; | ^~ line_minimization.c:117:42: warning: ‘f2’ may be used uninitialized [-Wmaybe-uninitialized] 117 | bottom = 2.0 * (t2*f0-t0*f2-t1*f0+t1*f2-t2*f1+t0*f1); | ~~~~~~~~~~~~~~~~~^~~~~~ line_minimization.c:38:42: note: ‘f2’ was declared here 38 | Real t0, t1, t2, f0, f1, f2, t_next, f_next, step, fsize; | ^~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o fit_curve2.o fit_curve2.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ fit_curve2.c: In function ‘fit_curve’: fit_curve2.c:783:72: warning: variable ‘fit’ set but not used [-Wunused-but-set-variable=] 783 | Real *parameters, range_tolerance, domain_tolerance, fit; | ^~~ fit_curve2.c: In function ‘get_closest_segment’: fit_curve2.c:606:11: warning: ‘best_seg’ may be used uninitialized [-Wmaybe-uninitialized] 606 | return( best_seg ); | ^ fit_curve2.c:590:16: note: ‘best_seg’ was declared here 590 | int seg, best_seg; | ^~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_polygons.o flatten_polygons.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ flatten_polygons.c: In function ‘normalize_size’: flatten_polygons.c:59:14: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=] 59 | Vector offset, diff; | ^~~~~~ make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_sheet.o flatten_sheet.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ In function ‘flatten_polygons’, inlined from ‘main’ at flatten_sheet.c:101:5: flatten_sheet.c:291:69: warning: ‘which’ may be used uninitialized [-Wmaybe-uninitialized] 291 | fixed_pos[0][1] = distance_between_points( &polygons->points[which], | ^ flatten_sheet.c: In function ‘main’: flatten_sheet.c:252:64: note: ‘which’ was declared here 252 | int i, p, point, *n_neighbours, **neighbours, which; | ^~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o fit_3d.o fit_3d.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ fit_3d.c: In function ‘create_image_coefficients’: fit_3d.c:483:16: warning: variable ‘n_involved’ set but not used [-Wunused-but-set-variable=] 483 | int n_involved, inv_index, neigh_parm_index, n_vectors, v; | ^~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_sheet3.o flatten_sheet3.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ flatten_sheet3.c: In function ‘create_coefficients’: flatten_sheet3.c:463:36: warning: format ‘%g’ expects a matching ‘double’ argument [-Wformat=] 463 | print_error( "Y = %g\n" ); | ~^ | | | double In file included from /usr/include/libminc/volume_io/arrays.h:32, from /usr/include/libminc/volume_io.h:43: In function ‘flatten_polygons’, inlined from ‘main’ at flatten_sheet3.c:140:5: flatten_sheet3.c:609:34: warning: ‘which’ may be used uninitialized [-Wmaybe-uninitialized] 609 | ALLOC( flat, n_neighbours[which] ); | ^ flatten_sheet3.c: In function ‘main’: flatten_sheet3.c:581:35: note: ‘which’ was declared here 581 | int i, p, point, which, n; | ^~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_to_sphere.o flatten_to_sphere.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flip_tags.o flip_tags.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flip_volume.o flip_volume.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_to_sphere2.o flatten_to_sphere2.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ In function ‘flatten_polygons’, inlined from ‘main’ at flatten_to_sphere2.c:78:5: flatten_to_sphere2.c:788:38: warning: ‘radius’ may be used uninitialized [-Wmaybe-uninitialized] 788 | parameters[n_parameters-1] = (dtype) radius; | ^~~~~~~~~~~~~~ flatten_to_sphere2.c: In function ‘main’: flatten_to_sphere2.c:643:27: note: ‘radius’ was declared here 643 | Real len, radius, *weights[3][3], *x_flat, *y_flat, *z_flat; | ^~~~~~ In function ‘evaluate_fit_along_line’, inlined from ‘minimize_along_line’ at flatten_to_sphere2.c:566:5, inlined from ‘flatten_polygons’ at flatten_to_sphere2.c:833:9, inlined from ‘main’ at flatten_to_sphere2.c:78:5: flatten_to_sphere2.c:412:53: warning: ‘dr’ may be used uninitialized [-Wmaybe-uninitialized] 412 | l2 = dx1 * dx1 + dy1 * dy1 + dz1 * dz1 - dr * dr; | ~~~^~~~ flatten_to_sphere2.c: In function ‘main’: flatten_to_sphere2.c:367:24: note: ‘dr’ was declared here 367 | Real dx, dy, dz, dr, dist, radius, radius2; | ^~ In function ‘evaluate_fit_along_line’, inlined from ‘minimize_along_line’ at flatten_to_sphere2.c:566:5, inlined from ‘flatten_polygons’ at flatten_to_sphere2.c:833:9, inlined from ‘main’ at flatten_to_sphere2.c:78:5: flatten_to_sphere2.c:411:54: warning: ‘radius’ may be used uninitialized [-Wmaybe-uninitialized] 411 | l1 = x1 * dx1 + y1 * dy1 + z1 * dz1 - radius * dr; | ~~~~~~~^~~~ flatten_to_sphere2.c: In function ‘main’: flatten_to_sphere2.c:367:34: note: ‘radius’ was declared here 367 | Real dx, dy, dz, dr, dist, radius, radius2; | ^~~~~~ In function ‘evaluate_fit_along_line’, inlined from ‘minimize_along_line’ at flatten_to_sphere2.c:566:5, inlined from ‘flatten_polygons’ at flatten_to_sphere2.c:833:9, inlined from ‘main’ at flatten_to_sphere2.c:78:5: flatten_to_sphere2.c:410:12: warning: ‘radius2’ may be used uninitialized [-Wmaybe-uninitialized] 410 | l0 = x1 * x1 + y1 * y1 + z1 * z1 - radius2; | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ flatten_to_sphere2.c: In function ‘main’: flatten_to_sphere2.c:367:42: note: ‘radius2’ was declared here 367 | Real dx, dy, dz, dr, dist, radius, radius2; | ^~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o f_prob.o f_prob.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o gaussian_blur_peaks.o gaussian_blur_peaks.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o get_tic.o get_tic.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ get_tic.c: In function ‘main’: get_tic.c:56:37: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 55 | voxel_flag_string[0] != 'v' && voxel_flag_string[0] != 'w' && | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | voxel_flag_string[0] != 'V' && voxel_flag_string[0] != 'W' ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o histogram_volume.o histogram_volume.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ histogram_volume.c: In function ‘main’: histogram_volume.c:227:30: warning: ‘min_pos’ may be used uninitialized [-Wmaybe-uninitialized] 227 | pos = min_pos + (max_pos - min_pos) * | ~~~~~~~~~^~~~~~~~~~ histogram_volume.c:30:48: note: ‘min_pos’ was declared here 30 | Real x_pos, y_height, pos, min_pos, max_pos; | ^~~~~~~ histogram_volume.c:227:30: warning: ‘max_pos’ may be used uninitialized [-Wmaybe-uninitialized] 227 | pos = min_pos + (max_pos - min_pos) * | ~~~~~~~~~^~~~~~~~~~ histogram_volume.c:30:57: note: ‘max_pos’ was declared here 30 | Real x_pos, y_height, pos, min_pos, max_pos; | ^~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o group_diff.o group_diff.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ In file included from /usr/include/libminc/volume_io.h:40: group_diff.c: In function ‘main’: /usr/include/libminc/volume_io/basic.h:137:62: warning: ‘n_points’ may be used uninitialized [-Wmaybe-uninitialized] 137 | #define for_less( i, start, end ) for( (i) = (start); (i) < (end); ++(i) ) | ~~~~^~~~~~~ group_diff.c:19:58: note: ‘n_points’ was declared here 19 | int i, n_objects, n_surfaces[2], group, n_points, s, p; | ^~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o intensity_statistics.o intensity_statistics.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ intensity_statistics.c: In function ‘main’: intensity_statistics.c:209:9: warning: ‘label_volume’ may be used uninitialized [-Wmaybe-uninitialized] 209 | delete_volume( label_volume ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ intensity_statistics.c:28:34: note: ‘label_volume’ was declared here 28 | Volume volume, label_volume; | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o interpolate_tags.o interpolate_tags.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o label_sulci.o label_sulci.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o lookup_labels.o lookup_labels.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o labels_to_rgb.o labels_to_rgb.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_diff_volume.o make_diff_volume.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make_diff_volume.c: In function ‘main’: make_diff_volume.c:64:49: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 64 | in_one = (min1 > max1 || min1 <= value1 && value1 <= max1); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ make_diff_volume.c:65:49: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 65 | in_two = (min2 > max2 || min2 <= value2 && value2 <= max2); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_gradient_volume.o make_gradient_volume.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make_gradient_volume.c: In function ‘main’: make_gradient_volume.c:47:27: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 47 | if( deriv_number != 1 && deriv_number != 2 || order != 1 && order != 3 ) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_grid_lines.o make_grid_lines.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_slice.o make_slice.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_line_links.o make_line_links.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_geodesic_volume.o make_geodesic_volume.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make_geodesic_volume.c: In function ‘label_surface_voxels’: make_geodesic_volume.c:168:40: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 168 | if( dx == 0 && dy == 0 && dz == 0 || | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ make_geodesic_volume.c:173:40: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 173 | if( dx == 0 && dy == 0 && dz == 0 || | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ In function ‘find_nearest_voxel’, inlined from ‘main’ at make_geodesic_volume.c:122:5: make_geodesic_volume.c:247:49: warning: array subscript 3 is above array bounds of ‘int[3]’ [-Warray-bounds=] 247 | limits[face][d] = limits[1-face][d]; | ~~~~~~~~~~~~~~^~~ make_geodesic_volume.c: In function ‘main’: make_geodesic_volume.c:213:14: note: while referencing ‘limits’ 213 | int limits[2][N_DIMENSIONS]; | ^~~~~~ In function ‘find_nearest_voxel’, inlined from ‘main’ at make_geodesic_volume.c:122:5: make_geodesic_volume.c:247:29: warning: array subscript 3 is above array bounds of ‘int[3]’ [-Warray-bounds=] 247 | limits[face][d] = limits[1-face][d]; | ~~~~~~~~~~~~^~~ make_geodesic_volume.c: In function ‘main’: make_geodesic_volume.c:213:14: note: while referencing ‘limits’ 213 | int limits[2][N_DIMENSIONS]; | ^~~~~~ make_geodesic_volume.c:49:30: warning: ‘MEM[(int *)&origin]’ may be used uninitialized [-Wmaybe-uninitialized] 49 | int dim, origin[N_DIMENSIONS]; | ^~~~~~ make_geodesic_volume.c:49:30: warning: ‘MEM[(int *)&origin + 4B]’ may be used uninitialized [-Wmaybe-uninitialized] In function ‘compute_geodesic_volume’, inlined from ‘main’ at make_geodesic_volume.c:124:5: make_geodesic_volume.c:422:5: warning: ‘MEM[(int *)&origin + 8B]’ may be used uninitialized [-Wmaybe-uninitialized] 422 | set_volume_real_value( volume, origin[X], origin[Y], origin[Z], 0, 0, 0.0 ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make_geodesic_volume.c: In function ‘main’: make_geodesic_volume.c:49:30: note: ‘MEM[(int *)&origin + 8B]’ was declared here 49 | int dim, origin[N_DIMENSIONS]; | ^~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_surface_bitlist.o make_surface_bitlist.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make_surface_bitlist.c: In function ‘label_surface_voxels’: make_surface_bitlist.c:161:44: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 161 | if( dx == 0 && dy == 0 && dz == 0 || | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ make_surface_bitlist.c:166:44: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 166 | if( dx == 0 && dy == 0 && dz == 0 || | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_sphere_transform.o make_sphere_transform.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o map_surface_to_sheet.o map_surface_to_sheet.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o map_sheets.o map_sheets.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o map_colours_to_sphere.o map_colours_to_sphere.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ map_colours_to_sphere.c: In function ‘main’: map_colours_to_sphere.c:282:36: warning: ‘interp[0]’ may be used uninitialized [-Wmaybe-uninitialized] 282 | Real coefs[8], best_value, interp[4], value; | ^~~~~~ map_colours_to_sphere.c:282:36: warning: ‘interp[1]’ may be used uninitialized [-Wmaybe-uninitialized] In function ‘evaluate_volume_by_voting’, inlined from ‘map_colours_to_sphere_topology’ at map_colours_to_sphere.c:252:13, inlined from ‘main’ at map_colours_to_sphere.c:93:5: map_colours_to_sphere.c:375:23: warning: ‘interp[2]’ may be used uninitialized [-Wmaybe-uninitialized] 375 | values[2] = interp[2]; | ~~~~~~~~~~^~~~~~~~~~~ map_colours_to_sphere.c: In function ‘main’: map_colours_to_sphere.c:282:36: note: ‘interp[2]’ was declared here 282 | Real coefs[8], best_value, interp[4], value; | ^~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o mask_values.o mask_values.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o mask_volume.o mask_volume.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o match_tags.o match_tags.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ match_tags.c:21:13: warning: ‘rcsid’ defined but not used [-Wunused-variable] 21 | static char rcsid[]="$Header: /private-cvsroot/libraries/conglomerate/match_tags.c,v 1.1 2004-04-07 15:53:20 bert Exp $"; | ^~~~~ match_tags.c: In function ‘main’: match_tags.c:87:34: warning: ‘near_tag’ may be used uninitialized [-Wmaybe-uninitialized] 87 | int ipoint1, ipoint2, icoord, near_tag; | ^~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o marching_cubes.o marching_cubes.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ marching_cubes.c: In function ‘get_point_index’: marching_cubes.c:447:20: warning: variable ‘point_class’ set but not used [-Wunused-but-set-variable=] 447 | Point_classes point_class; | ^~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o minctotag.o minctotag.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ minctotag.c: In function ‘main’: minctotag.c:83:37: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 83 | if( min_id > max_id && value != 0.0 || | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o mincmask.o mincmask.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o minc_to_rgb.o minc_to_rgb.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o place_images.o place_images.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o normalize_pet.o normalize_pet.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o plane_polygon_intersect.o plane_polygon_intersect.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o preprocess_segmentation.o preprocess_segmentation.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_2d_coords.o print_2d_coords.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ print_2d_coords.c: In function ‘main’: print_2d_coords.c:11:41: warning: variable ‘poly’ set but not used [-Wunused-but-set-variable=] 11 | int n_src_objects, poly; | ^~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' g++ -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -c -o mincdefrag.o mincdefrag.cc In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ mincdefrag.cc: In function ‘int clean_color(int*, short int*, short int, short int, int)’: mincdefrag.cc:22:13: warning: unused variable ‘changed’ [-Wunused-variable] 22 | int changed, num_color, n_voxels; | ^~~~~~~ mincdefrag.cc:23:13: warning: unused variable ‘old_im1’ [-Wunused-variable] 23 | short * old_im1, * old_i, * old_ip1; | ^~~~~~~ mincdefrag.cc:23:24: warning: unused variable ‘old_i’ [-Wunused-variable] 23 | short * old_im1, * old_i, * old_ip1; | ^~~~~ mincdefrag.cc:23:33: warning: unused variable ‘old_ip1’ [-Wunused-variable] 23 | short * old_im1, * old_i, * old_ip1; | ^~~~~~~ mincdefrag.cc: In function ‘int extract_color(int*, short int, short int, int, VIO_Volume)’: mincdefrag.cc:159:12: warning: unused variable ‘i’ [-Wunused-variable] 159 | int i, j, k, ii; | ^ mincdefrag.cc:159:15: warning: unused variable ‘j’ [-Wunused-variable] 159 | int i, j, k, ii; | ^ mincdefrag.cc:159:18: warning: unused variable ‘k’ [-Wunused-variable] 159 | int i, j, k, ii; | ^ mincdefrag.cc:159:21: warning: unused variable ‘ii’ [-Wunused-variable] 159 | int i, j, k, ii; | ^~ mincdefrag.cc:165:11: warning: unused variable ‘nodes’ [-Wunused-variable] 165 | int * nodes = NULL; | ^~~~~ mincdefrag.cc:167:13: warning: unused variable ‘old_im1’ [-Wunused-variable] 167 | short * old_im1, * old_i, * old_ip1; | ^~~~~~~ mincdefrag.cc:167:24: warning: unused variable ‘old_i’ [-Wunused-variable] 167 | short * old_im1, * old_i, * old_ip1; | ^~~~~ mincdefrag.cc:167:33: warning: unused variable ‘old_ip1’ [-Wunused-variable] 167 | short * old_im1, * old_i, * old_ip1; | ^~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_all_labels.o print_all_labels.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_axis_angles.o print_axis_angles.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' g++ -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -c -o mincskel.o mincskel.cc In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ mincskel.cc: In function ‘int skel(int*, VIO_Volume)’: mincskel.cc:175:12: warning: unused variable ‘i’ [-Wunused-variable] 175 | int i, j, k, ii; | ^ mincskel.cc:175:15: warning: unused variable ‘j’ [-Wunused-variable] 175 | int i, j, k, ii; | ^ mincskel.cc:175:18: warning: unused variable ‘k’ [-Wunused-variable] 175 | int i, j, k, ii; | ^ mincskel.cc:175:21: warning: unused variable ‘ii’ [-Wunused-variable] 175 | int i, j, k, ii; | ^~ mincskel.cc:181:11: warning: unused variable ‘nodes’ [-Wunused-variable] 181 | int * nodes = NULL; | ^~~~~ mincskel.cc:183:13: warning: unused variable ‘old_im1’ [-Wunused-variable] 183 | short * old_im1, * old_i, * old_ip1; | ^~~~~~~ mincskel.cc:183:24: warning: unused variable ‘old_i’ [-Wunused-variable] 183 | short * old_im1, * old_i, * old_ip1; | ^~~~~ mincskel.cc:183:33: warning: unused variable ‘old_ip1’ [-Wunused-variable] 183 | short * old_im1, * old_i, * old_ip1; | ^~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_all_label_bounding_boxes.o print_all_label_bounding_boxes.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_volume_value.o print_volume_value.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_world_value.o print_world_value.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_world_values.o print_world_values.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ print_world_values.c: In function ‘main’: print_world_values.c:120:42: warning: format ‘%[^ ’ expects argument of type ‘char *’, but argument 3 has type ‘char (*)[255]’ [-Wformat=] 120 | if(fscanf(glimfile, "%[^ \t] %*[^\n] %*1[\n]", &cur_minc) > 0) { | ~~~~^~ ~~~~~~~~~ | | | | char * char (*)[255] print_world_values.c:52:23: warning: unused variable ‘r’ [-Wunused-variable] 52 | int i, r, keep_looping, n_coords; | ^ In file included from /usr/include/stdio.h:974, from /usr/include/libminc/volume_io/basic.h:34, from /usr/include/libminc/volume_io.h:40: In function ‘printf’, inlined from ‘main’ at print_world_values.c:137:5: /usr/include/bits/stdio2.h:118:10: warning: ‘voxx’ may be used uninitialized [-Wmaybe-uninitialized] 118 | return __printf_chk (__USE_FORTIFY_LEVEL - 1, __fmt, __va_arg_pack ()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ print_world_values.c: In function ‘main’: print_world_values.c:50:20: note: ‘voxx’ was declared here 50 | int voxx, voxy, voxz, sizes[MAX_DIMENSIONS]; | ^~~~ In function ‘printf’, inlined from ‘main’ at print_world_values.c:137:5: /usr/include/bits/stdio2.h:118:10: warning: ‘voxy’ may be used uninitialized [-Wmaybe-uninitialized] 118 | return __printf_chk (__USE_FORTIFY_LEVEL - 1, __fmt, __va_arg_pack ()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ print_world_values.c: In function ‘main’: print_world_values.c:50:26: note: ‘voxy’ was declared here 50 | int voxx, voxy, voxz, sizes[MAX_DIMENSIONS]; | ^~~~ In function ‘printf’, inlined from ‘main’ at print_world_values.c:137:5: /usr/include/bits/stdio2.h:118:10: warning: ‘voxz’ may be used uninitialized [-Wmaybe-uninitialized] 118 | return __printf_chk (__USE_FORTIFY_LEVEL - 1, __fmt, __va_arg_pack ()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ print_world_values.c: In function ‘main’: print_world_values.c:50:32: note: ‘voxz’ was declared here 50 | int voxx, voxy, voxz, sizes[MAX_DIMENSIONS]; | ^~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o random_warp.o random_warp.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o reparameterize_line.o reparameterize_line.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o rgb_to_minc.o rgb_to_minc.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o scale_minc_image.o scale_minc_image.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o scan_object_to_volume.o scan_object_to_volume.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o segment_probabilities.o segment_probabilities.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o scan_lines_to_polygons.o scan_lines_to_polygons.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o stats_tag_file.o stats_tag_file.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ stats_tag_file.c: In function ‘get_stats_for_one_file’: stats_tag_file.c:100:66: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 100 | (Real) Point_y(marker->position) >= y_min_range && | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ 101 | (Real) Point_y(marker->position) <= y_max_range ) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o spherical_resample.o spherical_resample.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ spherical_resample.c: In function ‘main’: spherical_resample.c:134:48: warning: ‘in_values’ may be used uninitialized [-Wmaybe-uninitialized] 134 | value += weights[i] * in_values[surface->indices[ | ^ spherical_resample.c:16:40: note: ‘in_values’ was declared here 16 | Real dist, value, *in_values; | ^~~~~~~~~ spherical_resample.c:140:17: warning: ‘value’ may be used uninitialized [-Wmaybe-uninitialized] 140 | if( output_real( out_file, value ) != OK || | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spherical_resample.c:16:32: note: ‘value’ was declared here 16 | Real dist, value, *in_values; | ^~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o subsample_volume.o subsample_volume.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o surface_mask.o surface_mask.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o tag_volume.o tag_volume.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o tagtominc.o tagtominc.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o threshold_volume.o threshold_volume.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o surface_mask2.o surface_mask2.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ surface_mask2.c: In function ‘binary_object_mask’: surface_mask2.c:45:42: warning: variable ‘max_real_value’ set but not used [-Wunused-but-set-variable=] 45 | Real min_real_value, max_real_value; | ^~~~~~~~~~~~~~ surface_mask2.c:45:26: warning: variable ‘min_real_value’ set but not used [-Wunused-but-set-variable=] 45 | Real min_real_value, max_real_value; | ^~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o trimesh_resample.o trimesh_resample.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o trimesh_set_points.o trimesh_set_points.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o trimesh_to_polygons.o trimesh_to_polygons.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o tags_to_spheres.o tags_to_spheres.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o transform_volume.o transform_volume.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o transform_tags.o transform_tags.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o transform_objects.o transform_objects.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o volume_object_evaluate.o volume_object_evaluate.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o two_surface_resample.o two_surface_resample.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ two_surface_resample.c: In function ‘main’: two_surface_resample.c:140:48: warning: ‘in_values’ may be used uninitialized [-Wmaybe-uninitialized] 140 | value += weights[i] * in_values[surface->indices[ | ^ two_surface_resample.c:17:40: note: ‘in_values’ was declared here 17 | Real dist, value, *in_values; | ^~~~~~~~~ two_surface_resample.c:146:17: warning: ‘value’ may be used uninitialized [-Wmaybe-uninitialized] 146 | if( output_real( out_file, value ) != OK || | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ two_surface_resample.c:17:32: note: ‘value’ was declared here 17 | Real dist, value, *in_values; | ^~~~~ make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o tri_mesh.o tri_mesh.c In file included from /usr/include/libminc/volume_io.h:47, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : /usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined 66 | #define MI_ORIGINAL_TYPE 0 | ^~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26: /usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition 194 | #define MI_ORIGINAL_TYPE ((nc_type) 0) | ^~~~~~~~~~~~~~~~ /usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined 68 | #define MAX_VAR_DIMS 100 | ^~~~~~~~~~~~ In file included from /usr/include/libminc/minc.h:174: /usr/include/netcdf.h:1960:9: note: this is the location of the previous definition 1960 | #define MAX_VAR_DIMS NC_MAX_VAR_DIMS | ^~~~~~~~~~~~ tri_mesh.c: In function ‘coalesce_on_node_values’: tri_mesh.c:970:39: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 970 | if( min_size_sq > 0.0 && size < min_size_sq || | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o add_labels add_labels.o minc_labels.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o add_labels add_labels.o minc_labels.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o autocrop_volume autocrop_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o autocrop_volume autocrop_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o apply_sphere_transform apply_sphere_transform.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o apply_sphere_transform apply_sphere_transform.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o average_voxels average_voxels.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o average_voxels average_voxels.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o blur_surface blur_surface.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o blur_surface blur_surface.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o box_filter_volume box_filter_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o box_filter_volume box_filter_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o box_filter_volume_nd box_filter_volume_nd.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o box_filter_volume_nd box_filter_volume_nd.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o chamfer_volume chamfer_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o chamfer_volume chamfer_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o chop_tags chop_tags.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o chop_tags chop_tags.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o clamp_volume clamp_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o clamp_volume clamp_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o classify_sulcus classify_sulcus.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o classify_sulcus classify_sulcus.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o clean_surface_labels clean_surface_labels.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o clean_surface_labels clean_surface_labels.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o cluster_volume cluster_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o cluster_volume cluster_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o clip_tags clip_tags.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o clip_tags clip_tags.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o coalesce_lines coalesce_lines.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o coalesce_lines coalesce_lines.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o close_surface close_surface.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o close_surface close_surface.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o compare_left_right compare_left_right.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o compare_left_right compare_left_right.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o compare_left_right_groups compare_left_right_groups.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o compare_left_right_groups compare_left_right_groups.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o composite_images composite_images.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o composite_images composite_images.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o compare_lengths compare_lengths.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o compare_lengths compare_lengths.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o composite_minc_images composite_minc_images.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o composite_minc_images composite_minc_images.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o composite_volumes composite_volumes.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o composite_volumes composite_volumes.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o compute_bounding_view compute_bounding_view.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o compute_bounding_view compute_bounding_view.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o concat_images concat_images.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o concat_images concat_images.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o compute_resels compute_resels.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o compute_resels compute_resels.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o contour_slice contour_slice.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o contour_slice contour_slice.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o count_thresholded_volume count_thresholded_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o count_thresholded_volume count_thresholded_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_2d_sheet create_2d_sheet.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_2d_sheet create_2d_sheet.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o convex_hull convex_hull.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o convex_hull convex_hull.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_box create_box.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_box create_box.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_2d_surface create_2d_surface.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_2d_surface create_2d_surface.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_label_map create_label_map.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_label_map create_label_map.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_four_volumes create_four_volumes.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_four_volumes create_four_volumes.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_mahalanobis create_mahalanobis.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_mahalanobis create_mahalanobis.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_landmark_full_volume create_landmark_full_volume.o get_filenames.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_landmark_full_volume create_landmark_full_volume.o get_filenames.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_surface_interpolation_lsq create_surface_interpolation_lsq.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_surface_interpolation_lsq create_surface_interpolation_lsq.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_warping_points create_warping_points.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_warping_points create_warping_points.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o diff_mahalanobis diff_mahalanobis.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o diff_mahalanobis diff_mahalanobis.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dilate_volume dilate_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dilate_volume dilate_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dim_image dim_image.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dim_image dim_image.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dilate_volume_completely dilate_volume_completely.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dilate_volume_completely dilate_volume_completely.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dump_deformation_distances dump_deformation_distances.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dump_deformation_distances dump_deformation_distances.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dump_points_to_tag_file dump_points_to_tag_file.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dump_points_to_tag_file dump_points_to_tag_file.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dump_rms dump_rms.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dump_rms dump_rms.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dump_transform dump_transform.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dump_transform dump_transform.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dump_uv dump_uv.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dump_uv dump_uv.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o evaluate evaluate.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o evaluate evaluate.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o extract_tag_slice extract_tag_slice.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o extract_tag_slice extract_tag_slice.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o extract_largest_line extract_largest_line.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o extract_largest_line extract_largest_line.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o fill_sulci fill_sulci.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o fill_sulci fill_sulci.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o find_buried_surface find_buried_surface.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_buried_surface find_buried_surface.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o find_image_bounding_box find_image_bounding_box.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_image_bounding_box find_image_bounding_box.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o find_tag_outliers find_tag_outliers.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_tag_outliers find_tag_outliers.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o find_peaks find_peaks.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_peaks find_peaks.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o find_vertex find_vertex.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_vertex find_vertex.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o find_volume_centroid find_volume_centroid.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_volume_centroid find_volume_centroid.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o fit_curve fit_curve.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o fit_curve fit_curve.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o find_surface_distances find_surface_distances.o search_utils.o find_in_direction.o model_objects.o intersect_voxel.o deform_line.o models.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_surface_distances find_surface_distances.o search_utils.o find_in_direction.o model_objects.o intersect_voxel.o deform_line.o models.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o fit_curve2 fit_curve2.o conjugate_min.o conjugate_grad.o line_minimization.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o fit_curve2 fit_curve2.o conjugate_min.o conjugate_grad.o line_minimization.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o flatten_polygons flatten_polygons.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flatten_polygons flatten_polygons.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o flatten_sheet flatten_sheet.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flatten_sheet flatten_sheet.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o flatten_sheet3 flatten_sheet3.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flatten_sheet3 flatten_sheet3.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o flatten_to_sphere flatten_to_sphere.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flatten_to_sphere flatten_to_sphere.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o flip_tags flip_tags.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flip_tags flip_tags.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o flip_volume flip_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flip_volume flip_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o flatten_to_sphere2 flatten_to_sphere2.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flatten_to_sphere2 flatten_to_sphere2.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o fit_3d fit_3d.o find_in_direction.o model_objects.o intersect_voxel.o deform_line.o models.o search_utils.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o fit_3d fit_3d.o find_in_direction.o model_objects.o intersect_voxel.o deform_line.o models.o search_utils.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o f_prob f_prob.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o f_prob f_prob.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o gaussian_blur_peaks gaussian_blur_peaks.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o gaussian_blur_peaks gaussian_blur_peaks.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o get_tic get_tic.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o get_tic get_tic.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o group_diff group_diff.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o group_diff group_diff.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o histogram_volume histogram_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o histogram_volume histogram_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o intensity_statistics intensity_statistics.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o intensity_statistics intensity_statistics.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o interpolate_tags interpolate_tags.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o interpolate_tags interpolate_tags.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o label_sulci label_sulci.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o label_sulci label_sulci.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o labels_to_rgb labels_to_rgb.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o labels_to_rgb labels_to_rgb.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o lookup_labels lookup_labels.o minc_labels.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o lookup_labels lookup_labels.o minc_labels.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_diff_volume make_diff_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_diff_volume make_diff_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_gradient_volume make_gradient_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_gradient_volume make_gradient_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_geodesic_volume make_geodesic_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_geodesic_volume make_geodesic_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_grid_lines make_grid_lines.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_grid_lines make_grid_lines.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_line_links make_line_links.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_line_links make_line_links.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_slice make_slice.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_slice make_slice.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_surface_bitlist make_surface_bitlist.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_surface_bitlist make_surface_bitlist.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_sphere_transform make_sphere_transform.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_sphere_transform make_sphere_transform.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o map_colours_to_sphere map_colours_to_sphere.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o map_colours_to_sphere map_colours_to_sphere.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o map_surface_to_sheet map_surface_to_sheet.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o map_surface_to_sheet map_surface_to_sheet.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o map_sheets map_sheets.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o map_sheets map_sheets.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o mask_values mask_values.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o mask_values mask_values.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o marching_cubes marching_cubes.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o marching_cubes marching_cubes.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o mask_volume mask_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o mask_volume mask_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o match_tags match_tags.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o match_tags match_tags.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o mincmask mincmask.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o mincmask mincmask.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o minctotag minctotag.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o minctotag minctotag.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CXX --mode=link g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o mincdefrag mincdefrag.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o mincdefrag mincdefrag.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CXX --mode=link g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o mincskel mincskel.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o mincskel mincskel.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o minc_to_rgb minc_to_rgb.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o minc_to_rgb minc_to_rgb.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o place_images place_images.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o place_images place_images.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o plane_polygon_intersect plane_polygon_intersect.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o plane_polygon_intersect plane_polygon_intersect.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o normalize_pet normalize_pet.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o normalize_pet normalize_pet.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o preprocess_segmentation preprocess_segmentation.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o preprocess_segmentation preprocess_segmentation.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o print_2d_coords print_2d_coords.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_2d_coords print_2d_coords.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o print_all_labels print_all_labels.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_all_labels print_all_labels.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o print_all_label_bounding_boxes print_all_label_bounding_boxes.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_all_label_bounding_boxes print_all_label_bounding_boxes.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o print_axis_angles print_axis_angles.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_axis_angles print_axis_angles.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o print_volume_value print_volume_value.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_volume_value print_volume_value.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o print_world_value print_world_value.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_world_value print_world_value.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o print_world_values print_world_values.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_world_values print_world_values.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o random_warp random_warp.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o random_warp random_warp.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o reparameterize_line reparameterize_line.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o reparameterize_line reparameterize_line.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o rgb_to_minc rgb_to_minc.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o rgb_to_minc rgb_to_minc.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o scale_minc_image scale_minc_image.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o scale_minc_image scale_minc_image.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o scan_lines_to_polygons scan_lines_to_polygons.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o scan_lines_to_polygons scan_lines_to_polygons.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o scan_object_to_volume scan_object_to_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o scan_object_to_volume scan_object_to_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o segment_probabilities segment_probabilities.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o segment_probabilities segment_probabilities.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o spherical_resample spherical_resample.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o spherical_resample spherical_resample.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o subsample_volume subsample_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o subsample_volume subsample_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o stats_tag_file stats_tag_file.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o stats_tag_file stats_tag_file.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o surface_mask surface_mask.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o surface_mask surface_mask.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o surface_mask2 surface_mask2.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o surface_mask2 surface_mask2.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o tag_volume tag_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o tag_volume tag_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o tagtominc tagtominc.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o tagtominc tagtominc.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o threshold_volume threshold_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o threshold_volume threshold_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o tags_to_spheres tags_to_spheres.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o tags_to_spheres tags_to_spheres.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o trimesh_set_points trimesh_set_points.o tri_mesh.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o trimesh_set_points trimesh_set_points.o tri_mesh.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o trimesh_to_polygons trimesh_to_polygons.o tri_mesh.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o trimesh_to_polygons trimesh_to_polygons.o tri_mesh.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o trimesh_resample trimesh_resample.o tri_mesh.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o trimesh_resample trimesh_resample.o tri_mesh.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o transform_volume transform_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o transform_volume transform_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o transform_tags transform_tags.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o transform_tags transform_tags.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o transform_objects transform_objects.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o transform_objects transform_objects.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o two_surface_resample two_surface_resample.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o two_surface_resample two_surface_resample.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o volume_object_evaluate volume_object_evaluate.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o volume_object_evaluate volume_object_evaluate.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.FA61iH + umask 022 + cd /builddir/build/BUILD/conglomerate-1.6.80-build + '[' /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT ++ dirname /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT + mkdir -p /builddir/build/BUILD/conglomerate-1.6.80-build + mkdir /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b + /usr/bin/make install DESTDIR=/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT 'INSTALL=/usr/bin/install -p' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /usr/bin/mkdir -p '/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin' /bin/sh ./libtool --mode=install /usr/bin/install -p add_labels apply_sphere_transform autocrop_volume average_voxels blur_surface box_filter_volume box_filter_volume_nd chamfer_volume chop_tags clamp_volume classify_sulcus clean_surface_labels clip_tags close_surface cluster_volume coalesce_lines compare_left_right compare_left_right_groups compare_lengths composite_images composite_minc_images composite_volumes compute_bounding_view compute_resels concat_images contour_slice convex_hull count_thresholded_volume create_2d_sheet create_2d_surface create_box create_four_volumes create_label_map create_landmark_full_volume create_mahalanobis create_surface_interpolation_lsq create_warping_points diff_mahalanobis dilate_volume dilate_volume_completely dim_image dump_deformation_distances dump_points_to_tag_file dump_rms dump_transform dump_uv evaluate extract_tag_slice extract_largest_line fill_sulci find_buried_surface find_image_bounding_box find_peaks find_surface_distances find_tag_outliers find_vertex find_volume_centroid fit_curve fit_curve2 fit_3d flatten_polygons flatten_sheet flatten_sheet3 flatten_to_sphere flatten_to_sphere2 flip_tags flip_volume f_prob gaussian_blur_peaks get_tic group_diff histogram_volume intensity_statistics interpolate_tags label_sulci labels_to_rgb lookup_labels make_diff_volume make_geodesic_volume make_gradient_volume make_grid_lines make_line_links make_slice make_surface_bitlist make_sphere_transform map_colours_to_sphere map_surface_to_sheet map_sheets marching_cubes mask_values mask_volume match_tags mincdefrag mincmask mincskel minctotag minc_to_rgb normalize_pet place_images plane_polygon_intersect preprocess_segmentation print_2d_coords print_all_labels print_all_label_bounding_boxes print_axis_angles print_volume_value print_world_value print_world_values random_warp reparameterize_line rgb_to_minc scale_minc_image scan_lines_to_polygons scan_object_to_volume segment_probabilities spherical_resample stats_tag_file subsample_volume surface_mask surface_mask2 tag_volume tagtominc threshold_volume trimesh_resample trimesh_set_points trimesh_to_polygons tags_to_spheres transform_volume transform_tags transform_objects two_surface_resample volume_object_evaluate '/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin' libtool: install: /usr/bin/install -p add_labels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/add_labels libtool: install: /usr/bin/install -p apply_sphere_transform /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/apply_sphere_transform libtool: install: /usr/bin/install -p autocrop_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/autocrop_volume libtool: install: /usr/bin/install -p average_voxels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/average_voxels libtool: install: /usr/bin/install -p blur_surface /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/blur_surface libtool: install: /usr/bin/install -p box_filter_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/box_filter_volume libtool: install: /usr/bin/install -p box_filter_volume_nd /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/box_filter_volume_nd libtool: install: /usr/bin/install -p chamfer_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/chamfer_volume libtool: install: /usr/bin/install -p chop_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/chop_tags libtool: install: /usr/bin/install -p clamp_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clamp_volume libtool: install: /usr/bin/install -p classify_sulcus /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/classify_sulcus libtool: install: /usr/bin/install -p clean_surface_labels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clean_surface_labels libtool: install: /usr/bin/install -p clip_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clip_tags libtool: install: /usr/bin/install -p close_surface /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/close_surface libtool: install: /usr/bin/install -p cluster_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/cluster_volume libtool: install: /usr/bin/install -p coalesce_lines /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/coalesce_lines libtool: install: /usr/bin/install -p compare_left_right /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_left_right libtool: install: /usr/bin/install -p compare_left_right_groups /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_left_right_groups libtool: install: /usr/bin/install -p compare_lengths /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_lengths libtool: install: /usr/bin/install -p composite_images /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_images libtool: install: /usr/bin/install -p composite_minc_images /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_minc_images libtool: install: /usr/bin/install -p composite_volumes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_volumes libtool: install: /usr/bin/install -p compute_bounding_view /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_bounding_view libtool: install: /usr/bin/install -p compute_resels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_resels libtool: install: /usr/bin/install -p concat_images /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/concat_images libtool: install: /usr/bin/install -p contour_slice /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/contour_slice libtool: install: /usr/bin/install -p convex_hull /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/convex_hull libtool: install: /usr/bin/install -p count_thresholded_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/count_thresholded_volume libtool: install: /usr/bin/install -p create_2d_sheet /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_2d_sheet libtool: install: /usr/bin/install -p create_2d_surface /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_2d_surface libtool: install: /usr/bin/install -p create_box /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_box libtool: install: /usr/bin/install -p create_four_volumes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_four_volumes libtool: install: /usr/bin/install -p create_label_map /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_label_map libtool: install: /usr/bin/install -p create_landmark_full_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_landmark_full_volume libtool: install: /usr/bin/install -p create_mahalanobis /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_mahalanobis libtool: install: /usr/bin/install -p create_surface_interpolation_lsq /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_surface_interpolation_lsq libtool: install: /usr/bin/install -p create_warping_points /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_warping_points libtool: install: /usr/bin/install -p diff_mahalanobis /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/diff_mahalanobis libtool: install: /usr/bin/install -p dilate_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dilate_volume libtool: install: /usr/bin/install -p dilate_volume_completely /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dilate_volume_completely libtool: install: /usr/bin/install -p dim_image /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dim_image libtool: install: /usr/bin/install -p dump_deformation_distances /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_deformation_distances libtool: install: /usr/bin/install -p dump_points_to_tag_file /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_points_to_tag_file libtool: install: /usr/bin/install -p dump_rms /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_rms libtool: install: /usr/bin/install -p dump_transform /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_transform libtool: install: /usr/bin/install -p dump_uv /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_uv libtool: install: /usr/bin/install -p evaluate /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/evaluate libtool: install: /usr/bin/install -p extract_tag_slice /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/extract_tag_slice libtool: install: /usr/bin/install -p extract_largest_line /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/extract_largest_line libtool: install: /usr/bin/install -p fill_sulci /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fill_sulci libtool: install: /usr/bin/install -p find_buried_surface /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_buried_surface libtool: install: /usr/bin/install -p find_image_bounding_box /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_image_bounding_box libtool: install: /usr/bin/install -p find_peaks /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_peaks libtool: install: /usr/bin/install -p find_surface_distances /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_surface_distances libtool: install: /usr/bin/install -p find_tag_outliers /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_tag_outliers libtool: install: /usr/bin/install -p find_vertex /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_vertex libtool: install: /usr/bin/install -p find_volume_centroid /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_volume_centroid libtool: install: /usr/bin/install -p fit_curve /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_curve libtool: install: /usr/bin/install -p fit_curve2 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_curve2 libtool: install: /usr/bin/install -p fit_3d /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_3d libtool: install: /usr/bin/install -p flatten_polygons /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_polygons libtool: install: /usr/bin/install -p flatten_sheet /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_sheet libtool: install: /usr/bin/install -p flatten_sheet3 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_sheet3 libtool: install: /usr/bin/install -p flatten_to_sphere /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_to_sphere libtool: install: /usr/bin/install -p flatten_to_sphere2 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_to_sphere2 libtool: install: /usr/bin/install -p flip_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flip_tags libtool: install: /usr/bin/install -p flip_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flip_volume libtool: install: /usr/bin/install -p f_prob /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/f_prob libtool: install: /usr/bin/install -p gaussian_blur_peaks /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/gaussian_blur_peaks libtool: install: /usr/bin/install -p get_tic /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/get_tic libtool: install: /usr/bin/install -p group_diff /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/group_diff libtool: install: /usr/bin/install -p histogram_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/histogram_volume libtool: install: /usr/bin/install -p intensity_statistics /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/intensity_statistics libtool: install: /usr/bin/install -p interpolate_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/interpolate_tags libtool: install: /usr/bin/install -p label_sulci /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/label_sulci libtool: install: /usr/bin/install -p labels_to_rgb /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/labels_to_rgb libtool: install: /usr/bin/install -p lookup_labels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/lookup_labels libtool: install: /usr/bin/install -p make_diff_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_diff_volume libtool: install: /usr/bin/install -p make_geodesic_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_geodesic_volume libtool: install: /usr/bin/install -p make_gradient_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_gradient_volume libtool: install: /usr/bin/install -p make_grid_lines /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_grid_lines libtool: install: /usr/bin/install -p make_line_links /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_line_links libtool: install: /usr/bin/install -p make_slice /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_slice libtool: install: /usr/bin/install -p make_surface_bitlist /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_surface_bitlist libtool: install: /usr/bin/install -p make_sphere_transform /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_sphere_transform libtool: install: /usr/bin/install -p map_colours_to_sphere /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_colours_to_sphere libtool: install: /usr/bin/install -p map_surface_to_sheet /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_surface_to_sheet libtool: install: /usr/bin/install -p map_sheets /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_sheets libtool: install: /usr/bin/install -p marching_cubes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/marching_cubes libtool: install: /usr/bin/install -p mask_values /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mask_values libtool: install: /usr/bin/install -p mask_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mask_volume libtool: install: /usr/bin/install -p match_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/match_tags libtool: install: /usr/bin/install -p mincdefrag /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincdefrag libtool: install: /usr/bin/install -p mincmask /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincmask libtool: install: /usr/bin/install -p mincskel /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincskel libtool: install: /usr/bin/install -p minctotag /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/minctotag libtool: install: /usr/bin/install -p minc_to_rgb /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/minc_to_rgb libtool: install: /usr/bin/install -p normalize_pet /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/normalize_pet libtool: install: /usr/bin/install -p place_images /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/place_images libtool: install: /usr/bin/install -p plane_polygon_intersect /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/plane_polygon_intersect libtool: install: /usr/bin/install -p preprocess_segmentation /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/preprocess_segmentation libtool: install: /usr/bin/install -p print_2d_coords /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_2d_coords libtool: install: /usr/bin/install -p print_all_labels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_all_labels libtool: install: /usr/bin/install -p print_all_label_bounding_boxes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_all_label_bounding_boxes libtool: install: /usr/bin/install -p print_axis_angles /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_axis_angles libtool: install: /usr/bin/install -p print_volume_value /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_volume_value libtool: install: /usr/bin/install -p print_world_value /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_world_value libtool: install: /usr/bin/install -p print_world_values /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_world_values libtool: install: /usr/bin/install -p random_warp /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/random_warp libtool: install: /usr/bin/install -p reparameterize_line /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/reparameterize_line libtool: install: /usr/bin/install -p rgb_to_minc /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/rgb_to_minc libtool: install: /usr/bin/install -p scale_minc_image /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scale_minc_image libtool: install: /usr/bin/install -p scan_lines_to_polygons /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scan_lines_to_polygons libtool: install: /usr/bin/install -p scan_object_to_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scan_object_to_volume libtool: install: /usr/bin/install -p segment_probabilities /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/segment_probabilities libtool: install: /usr/bin/install -p spherical_resample /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/spherical_resample libtool: install: /usr/bin/install -p stats_tag_file /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/stats_tag_file libtool: install: /usr/bin/install -p subsample_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/subsample_volume libtool: install: /usr/bin/install -p surface_mask /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/surface_mask libtool: install: /usr/bin/install -p surface_mask2 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/surface_mask2 libtool: install: /usr/bin/install -p tag_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tag_volume libtool: install: /usr/bin/install -p tagtominc /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tagtominc libtool: install: /usr/bin/install -p threshold_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/threshold_volume libtool: install: /usr/bin/install -p trimesh_resample /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_resample libtool: install: /usr/bin/install -p trimesh_set_points /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_set_points libtool: install: /usr/bin/install -p trimesh_to_polygons /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_to_polygons libtool: install: /usr/bin/install -p tags_to_spheres /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tags_to_spheres libtool: install: /usr/bin/install -p transform_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_volume libtool: install: /usr/bin/install -p transform_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_tags libtool: install: /usr/bin/install -p transform_objects /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_objects libtool: install: /usr/bin/install -p two_surface_resample /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/two_surface_resample libtool: install: /usr/bin/install -p volume_object_evaluate /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/volume_object_evaluate /usr/bin/mkdir -p '/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin' /usr/bin/install -p nlfit_smr mritotal_suppress smooth_mask compute_icbm_vols multispectral_stx_registration sphere_resample_obj suppress_fat regional_thickness remap_to_lobes '/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin' make[1]: Nothing to be done for 'install-data-am'. make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' + find /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT -name '*.la' -delete + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 1.6.80-1.20120308git166303d.fc44 --unique-debug-suffix -1.6.80-1.20120308git166303d.fc44.aarch64 --unique-debug-src-base conglomerate-1.6.80-1.20120308git166303d.fc44.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 --remove-section .gnu.build.attributes -S debugsourcefiles.list /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b find-debuginfo: starting Extracting debug info from 132 files DWARF-compressing 132 files sepdebugcrcfix: Updated 132 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/conglomerate-1.6.80-1.20120308git166303d.fc44.aarch64 find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + COMPRESS='gzip -9 -n' + COMPRESS_EXT=.gz + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/bin/remap_to_lobes from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/regional_thickness from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/suppress_fat from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/sphere_resample_obj from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/multispectral_stx_registration from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/compute_icbm_vols from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/smooth_mask from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/mritotal_suppress from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/nlfit_smr from /usr/bin/env perl to #!/usr/bin/perl + /usr/lib/rpm/brp-remove-la-files + /usr/lib/rpm/redhat/brp-python-rpm-in-distinfo + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-det --brp -j4 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT Scanned 11 directories and 428 files, processed 0 inodes, 0 modified (0 replaced + 0 rewritten), 0 unsupported format, 0 errors + /usr/bin/linkdupes --brp /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr Scanned 10 directories and 428 files, considered 428 files, read 134 files, linked 0 files, 0 errors sum of sizes of linked files: 0 bytes Reading /builddir/build/BUILD/conglomerate-1.6.80-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.sktGFl + umask 022 + cd /builddir/build/BUILD/conglomerate-1.6.80-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b ++ ls -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin ++ wc -l + n=141 141 programs installed + test 141 -eq 141 + echo '141 programs installed' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/add_labels + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/apply_sphere_transform + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/autocrop_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/average_voxels + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/blur_surface + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/box_filter_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/box_filter_volume_nd + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/chamfer_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/chop_tags + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clamp_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/classify_sulcus + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clean_surface_labels + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clip_tags + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/close_surface + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/cluster_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/coalesce_lines + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_left_right + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_left_right_groups + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_lengths + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_images + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_minc_images + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_volumes + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_bounding_view + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_icbm_vols + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_icbm_vols /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_icbm_vols syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_resels + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/concat_images + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/contour_slice + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/convex_hull + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/count_thresholded_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_2d_sheet + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_2d_surface + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_box + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_four_volumes + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_label_map + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_landmark_full_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_mahalanobis + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_surface_interpolation_lsq + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_warping_points + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/diff_mahalanobis + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dilate_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dilate_volume_completely + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dim_image + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_deformation_distances + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_points_to_tag_file + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_rms + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_transform + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_uv + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/evaluate + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/extract_largest_line + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/extract_tag_slice + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/f_prob + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fill_sulci + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_buried_surface + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_image_bounding_box + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_peaks + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_surface_distances + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_tag_outliers + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_vertex + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_volume_centroid + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_3d + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_curve + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_curve2 + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_polygons + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_sheet + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_sheet3 + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_to_sphere + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_to_sphere2 + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flip_tags + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flip_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/gaussian_blur_peaks + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/get_tic + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/group_diff + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/histogram_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/intensity_statistics + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/interpolate_tags + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/label_sulci + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/labels_to_rgb + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/lookup_labels + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_diff_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_geodesic_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_gradient_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_grid_lines + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_line_links + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_slice + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_sphere_transform + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_surface_bitlist + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_colours_to_sphere + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_sheets + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_surface_to_sheet + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/marching_cubes + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mask_values + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mask_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/match_tags + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/minc_to_rgb + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincdefrag + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincmask + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincskel + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/minctotag + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mritotal_suppress + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mritotal_suppress /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mritotal_suppress syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/multispectral_stx_registration + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/multispectral_stx_registration /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/multispectral_stx_registration syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/nlfit_smr + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/nlfit_smr /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/nlfit_smr syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/normalize_pet + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/place_images + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/plane_polygon_intersect + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/preprocess_segmentation + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_2d_coords + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_all_label_bounding_boxes + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_all_labels + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_axis_angles + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_volume_value + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_world_value + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_world_values + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/random_warp + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/regional_thickness + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/regional_thickness /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/regional_thickness syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/remap_to_lobes + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/remap_to_lobes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/remap_to_lobes syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/reparameterize_line + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/rgb_to_minc + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scale_minc_image + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scan_lines_to_polygons + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scan_object_to_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/segment_probabilities + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/smooth_mask + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/smooth_mask /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/smooth_mask syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/sphere_resample_obj + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/sphere_resample_obj /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/sphere_resample_obj syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/spherical_resample + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/stats_tag_file + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/subsample_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/suppress_fat + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/suppress_fat /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/suppress_fat syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/surface_mask + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/surface_mask2 + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tag_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tags_to_spheres + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tagtominc + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/threshold_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_objects + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_tags + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_resample + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_set_points + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_to_polygons + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/two_surface_resample + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/volume_object_evaluate + grep -q '^#!.*perl' + RPM_EC=0 ++ jobs -p + exit 0 Processing files: conglomerate-1.6.80-1.20120308git166303d.fc44.aarch64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.nDYCkS + umask 022 + cd /builddir/build/BUILD/conglomerate-1.6.80-build + cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b + DOCDIR=/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate + cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/AUTHORS /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate + cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/ChangeLog /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate + cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/NEWS /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate + cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/README /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate + cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/TODO /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.8IWVm4 + umask 022 + cd /builddir/build/BUILD/conglomerate-1.6.80-build + cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b + LICENSEDIR=/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/licenses/conglomerate + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/licenses/conglomerate + cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/COPYING /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/licenses/conglomerate + RPM_EC=0 ++ jobs -p + exit 0 Provides: conglomerate = 1.6.80-1.20120308git166303d.fc44 conglomerate(aarch-64) = 1.6.80-1.20120308git166303d.fc44 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/perl ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libbicpl.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.23)(64bit) libm.so.6(GLIBC_2.29)(64bit) libminc2.so.5.2.0()(64bit) libnetcdf.so.22()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: conglomerate-debugsource-1.6.80-1.20120308git166303d.fc44.aarch64 Provides: conglomerate-debugsource = 1.6.80-1.20120308git166303d.fc44 conglomerate-debugsource(aarch-64) = 1.6.80-1.20120308git166303d.fc44 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: conglomerate-debuginfo-1.6.80-1.20120308git166303d.fc44.aarch64 Provides: conglomerate-debuginfo = 1.6.80-1.20120308git166303d.fc44 conglomerate-debuginfo(aarch-64) = 1.6.80-1.20120308git166303d.fc44 debuginfo(build-id) = 0274fde30c28f64ff3db1d80da4c8ff5d16a9913 debuginfo(build-id) = 031a685a91285a205d5f823073a896ec3a3014af debuginfo(build-id) = 06af22bdb3c3a68eeecbb3c511c4fc6b82aeb962 debuginfo(build-id) = 075116b2f136763f2330d9e801d3164fd2aa6186 debuginfo(build-id) = 081a1b1225bdb0b949d9d50d11a16ec8e69e24a4 debuginfo(build-id) = 0855e7ceb5b19116db8fbe8f30bcaf6d4f24a9e7 debuginfo(build-id) = 0ceb870c1dd07782b3dfae3d4c338d199228b8ad debuginfo(build-id) = 0d7e42d99d2ffa88707cdbd0b9aa5b127e9b313c debuginfo(build-id) = 0ebefb80b29b3704532e323f793325b6561f4c54 debuginfo(build-id) = 116abd120a2b4e1f46cba0b129c3a6971098f99c debuginfo(build-id) = 1210ffcf7ce829c7dc746eae3a9c97b4934ba295 debuginfo(build-id) = 1222d8b307ba306d4a74b1624a9a4c27c8323bba debuginfo(build-id) = 141a57b9ea5ed2fc6ea91e7478fcefe332137d30 debuginfo(build-id) = 163bec78a326ec067d527b13ec571575e99af93d debuginfo(build-id) = 17b1b8be498e8c168562cf332787defa79a75d59 debuginfo(build-id) = 17b2e7b26a433eb6d0353258b01f46517060c408 debuginfo(build-id) = 1911d863f369fad7e2849649871d8dc45da48546 debuginfo(build-id) = 19c88f3f7ecba1559867255b00806faeacb90536 debuginfo(build-id) = 1af13a1d92ff314b14f691321438da08d8192da0 debuginfo(build-id) = 1c291ff14dab789f03741798e1430e618fcde310 debuginfo(build-id) = 1cac4715852953a567a8703c34757d76cf2dc310 debuginfo(build-id) = 1fef328cb8b635a3ae005e6e89802bc4f68486d6 debuginfo(build-id) = 20685d8c38e2a0518ca8fe788793364eef05da5f debuginfo(build-id) = 222e88b4c1b5b0a04bad313502e23865a30c3d1f debuginfo(build-id) = 279a983d15fafec60799ecfa996b84b9b4536cd4 debuginfo(build-id) = 27e6b2aa03c430b3119e597467c7984148089891 debuginfo(build-id) = 2ab80e8246ff6704b285c761450aaf5866e50ea2 debuginfo(build-id) = 2bea5b5d36c4d0287f303aa6a3e9a2e868c1ae34 debuginfo(build-id) = 2deb6cdffae698c6123b22b699cd3f19a677abd5 debuginfo(build-id) = 2e956b25e4cf7353a9de1f0ed90bc4e633f3ef62 debuginfo(build-id) = 31f1955aeeef058b00fc501d4af09cb2e6fa4afb debuginfo(build-id) = 323403411738da298f778f855724da6fa7986a60 debuginfo(build-id) = 3498857071f70a2673c845cac537efc402e24717 debuginfo(build-id) = 36023d2b8d51a3a8bb4c56341d4706eb10fdcc60 debuginfo(build-id) = 36d5b2a03f292c7a7369b3693afbcdf8aa6a2a50 debuginfo(build-id) = 3adb94bb6c8be6b5037fb90d2fd0a65b1406a565 debuginfo(build-id) = 3e6c6c6e6f80c60c5b53e28d03d88d9d6f80fe79 debuginfo(build-id) = 3e78a8d185288c44d5480e18fd2b966474b00b1a debuginfo(build-id) = 3fffd31c4160fc454db66e8f11ff4ed0e76a9d16 debuginfo(build-id) = 4185ebdfceec1769e38ab194666809f2fcc26ef3 debuginfo(build-id) = 4246d10ef52f93e2c016992c1777256420c87430 debuginfo(build-id) = 426df50299ca84077c0ded7278748e787b81c980 debuginfo(build-id) = 45a04700bdb11701d70a9fa0bb79a9086aa5a91a debuginfo(build-id) = 45eab539719525985f6dff11d13f14202b41488e debuginfo(build-id) = 47f1bcb279c3e85b88f90a76e6900a24c47a2c08 debuginfo(build-id) = 47f9f4db01ed2f9491358217c181da70a6552a92 debuginfo(build-id) = 493b6f3b82911466c3f057f0c7b19d23bfff5020 debuginfo(build-id) = 4a45349aa84acb0e762024045750da4f2c2395f3 debuginfo(build-id) = 56c94bf692a63b8e5bd025cb63083e3b91d044bf debuginfo(build-id) = 5b0c4fb6e566fe26b5ade1ddb5869a3ed87f328b debuginfo(build-id) = 60154374381a6171ca36b58a9eb8a0a57ce79cb7 debuginfo(build-id) = 606950e2f874afc73ca172366e71f2a12843f08d debuginfo(build-id) = 60e937c7c16f5b8cea2fa726caaabfe16515c33b debuginfo(build-id) = 60f4944b1feaef4a3ee8e0b7d47569ac58547a2b debuginfo(build-id) = 628f5eb12644ed6254cdb280e455997d5cfd515e debuginfo(build-id) = 62c6b950df45ae0c904a639821ae46aafd2f2a63 debuginfo(build-id) = 64dd2ccf2fdabdb280eb6df532a6d0882f6f4533 debuginfo(build-id) = 69833fd133a16b72650b65864834a53d71c7da38 debuginfo(build-id) = 6a8441fa66cb5780fe4a2d82b978f38f1108b49a debuginfo(build-id) = 6b4281b6220d31b5a5aca35bbfff2e0a53bc4173 debuginfo(build-id) = 6c36a44ece65b52e5ef2cd68d01ad227b955974c debuginfo(build-id) = 6c59199ec5eff6558a80eb98ba8babb5ebd01c60 debuginfo(build-id) = 6e80067b1e55f75b8cd91ffda05cd9af86dcaa4a debuginfo(build-id) = 6f39bd2225c3620676044e656cc49e8bd3ee63e4 debuginfo(build-id) = 6f4b65bc1081cc5d3b2d5f148b7b068760840479 debuginfo(build-id) = 700871df2fda1df3c1dbe8307f04e41190e90cb0 debuginfo(build-id) = 71e0956847772fd20dde5a1813528b5c19a855e6 debuginfo(build-id) = 71ecefa4c8f8c55939f583f983836faba11426af debuginfo(build-id) = 72b0c2862b73be429469845c756883df5a5aadfb debuginfo(build-id) = 774a2935e05c356601378d9e2c821e09370e162a debuginfo(build-id) = 7c89efa5e99ca99a74d7874084d1eadc995e4b94 debuginfo(build-id) = 82da551f21386c8bbadbd8756ca80dadb5055016 debuginfo(build-id) = 82e7bd7bec8ef2c99b2b3a6b4e4de7debd842edc debuginfo(build-id) = 85519f7a3b584b1a15cffde84a0c242772a0b3de debuginfo(build-id) = 86b60c495cc53ee6d38e8faaca214eab29d7dab6 debuginfo(build-id) = 881ca0c2b60402efef9ca0cc13d0b877532c8dac debuginfo(build-id) = 8d5871efc07a2bc1fc073bef1e3edc25cf52b58e debuginfo(build-id) = 927c842514f86b95caa82041a26095254b9fe463 debuginfo(build-id) = 92bfef978d1606e8413af39195bf8b081bd60f0c debuginfo(build-id) = 94fac63da7386af1b78325f3c28076db411a3d05 debuginfo(build-id) = 96a78a60890ad48128c39a8d70c62f0da5e9520c debuginfo(build-id) = 98c56c5ae9234168804f4c474793f43fe450bb02 debuginfo(build-id) = 9b0c57ed04c09a283d183fc9a4f6e3b2a3e5a06b debuginfo(build-id) = 9b506e208883bf3180253cd03e3a230a18c2ff34 debuginfo(build-id) = 9b9e3d3b68adf7d67e69ecae8bac7686172059f5 debuginfo(build-id) = 9bfe0703260ea9886b6265662f7180480a667f4b debuginfo(build-id) = a6a57cfd96e7664adf712c662d1a64061c6a9980 debuginfo(build-id) = ad7910181a49b00eb22f5a774f8192abb7b4b0f7 debuginfo(build-id) = b223140c736be3380a44d4f301aef3fdf29bed76 debuginfo(build-id) = b42416ca1e6e3e8cd3188ce3d93543a32bce56bf debuginfo(build-id) = b44a39b499901ac7c9df51268391b900c4145688 debuginfo(build-id) = b7a5f9a6ea64ad68936ef4f24209e4c02a931366 debuginfo(build-id) = b837d740707a8575ebe8e5127e1dbd2da849cf72 debuginfo(build-id) = b84e78dd79c5a6ed5cc4387e4c088e75984ae164 debuginfo(build-id) = bc0b63323941a0a37ca661a9a8a4f16b3f6d1532 debuginfo(build-id) = bc4e78a0c01124a001bd34ee10872ca9ef26cff1 debuginfo(build-id) = bc91bd6dfa56dc2ccc86bd7ed5f3963f2b97cf64 debuginfo(build-id) = bce437d53b81595d93e6ac8de30d8f9110060479 debuginfo(build-id) = be13489d2fc9de0e97810033d5987b6ac9028cdb debuginfo(build-id) = be415db57acf711c71d32a71da623817b1acce66 debuginfo(build-id) = bfb24a8f194f772bd489eceb9070d687b91ce9a1 debuginfo(build-id) = bfcb7fd75c319cb1ee06b85e9e1df03890c85b55 debuginfo(build-id) = c0856333aa845b3e179b3332bd6683316d7e5fa4 debuginfo(build-id) = c0a8f84f4ac335d20a9431acd286b509aa1645ff debuginfo(build-id) = c2a4883a3b1e1907f2adc3e855676cd815bc890a debuginfo(build-id) = c470922a78eb3268d3e7fc785d4811345143aaa3 debuginfo(build-id) = c8ea3b2089f688fc52dbf716f4ee845fad5fb549 debuginfo(build-id) = c94b7400eee97530a8c48ab1b11b137d88c0a78f debuginfo(build-id) = cc4f388a6927f2e59d8d50606cdf3d38b5e01ebc debuginfo(build-id) = ce22c86a6980292ba80cd57086691c725c2436f4 debuginfo(build-id) = d15723d401eeecc358d74aabdfb3fe6eaf93acf0 debuginfo(build-id) = d2280e2dac36a9cda5c158c14227ec62adfd429f debuginfo(build-id) = d52bf18334e6309612856170699851506d1acc1b debuginfo(build-id) = d79594c4983341ac7da5c2e2e35a1b9eb2a7e953 debuginfo(build-id) = d7f2e04db6cbb52de19430dee2b551cbe1712604 debuginfo(build-id) = d990ff186506cb5454458199185f283eb86c3c41 debuginfo(build-id) = d9a96825d426481e1087e1f2f32ef7533d670b42 debuginfo(build-id) = dac7245dc085d57cd97570fcdd7113a12cb95bc2 debuginfo(build-id) = dfe2e427fe901d9d3c7b6741e3f25afbfbd3a215 debuginfo(build-id) = e743822923d590c8cc3326871887600acb6eda55 debuginfo(build-id) = e89c3ecf199cbb503d3e0993d65236a5d640c417 debuginfo(build-id) = e915c494c635e0a1cffcaffe37a2d40dd9f60c1a debuginfo(build-id) = ebe4da246145afb9bdd8b0f6af06a2be22a4edca debuginfo(build-id) = ee95edfe3749a460b792a3b514456261c374944b debuginfo(build-id) = f25527ead7de1d0d81c12f507635611921efbfb7 debuginfo(build-id) = f6a725e5cee70e9de08c646d7529f62a5a35562d debuginfo(build-id) = f82d29c37dc648a8e755bdd5ba170bf274bc9b20 debuginfo(build-id) = f8bc58496170dc4f6dbd6ca3aef7e62e651ed2c5 debuginfo(build-id) = f909d92bdfae40bf48d57b8e7e575b877d1187db debuginfo(build-id) = f9cc1e8d213c73da82cf4aa0b7ff71b5a28b719f debuginfo(build-id) = fa90e8055c118de207fdd4c41017b41a304e62e3 debuginfo(build-id) = fbb20d22187c71d32477687513527f1a5bcd9836 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: conglomerate-debugsource(aarch-64) = 1.6.80-1.20120308git166303d.fc44 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT Wrote: /builddir/build/RPMS/conglomerate-debugsource-1.6.80-1.20120308git166303d.fc44.aarch64.rpm Wrote: /builddir/build/RPMS/conglomerate-1.6.80-1.20120308git166303d.fc44.aarch64.rpm Wrote: /builddir/build/RPMS/conglomerate-debuginfo-1.6.80-1.20120308git166303d.fc44.aarch64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.OBJVh2 + umask 022 + cd /builddir/build/BUILD/conglomerate-1.6.80-build + test -d /builddir/build/BUILD/conglomerate-1.6.80-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/conglomerate-1.6.80-build + rm -rf /builddir/build/BUILD/conglomerate-1.6.80-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild conglomerate-1.6.80-1.20120308git166303d.fc44.src.rpm Finish: build phase for conglomerate-1.6.80-1.20120308git166303d.fc44.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-44-aarch64-1790274075.642985/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names INFO: Done(/var/lib/copr-rpmbuild/results/conglomerate-1.6.80-1.20120308git166303d.fc44.src.rpm) Config(child) 1 minutes 4 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "conglomerate-debuginfo", "epoch": null, "version": "1.6.80", "release": "1.20120308git166303d.fc44", "arch": "aarch64" }, { "name": "conglomerate", "epoch": null, "version": "1.6.80", "release": "1.20120308git166303d.fc44", "arch": "aarch64" }, { "name": "conglomerate", "epoch": null, "version": "1.6.80", "release": "1.20120308git166303d.fc44", "arch": "src" }, { "name": "conglomerate-debugsource", "epoch": null, "version": "1.6.80", "release": "1.20120308git166303d.fc44", "arch": "aarch64" } ] } RPMResults finished