Warning: Permanently added '54.146.214.231' (ED25519) to the list of known hosts.

You can reproduce this build on your computer by running:

  sudo dnf install copr-rpmbuild
  /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/11031717-fedora-44-x86_64 --chroot fedora-44-x86_64


Version: 1.10
PID: 11865
Logging PID: 11867
Task:
{'allow_user_ssh': False,
 'appstream': False,
 'background': False,
 'build_id': 11031717,
 'buildroot_pkgs': [],
 'chroot': 'fedora-44-x86_64',
 'enable_net': False,
 'fedora_review': False,
 'git_hash': 'be8a75149935cc4424e6a5efe39024d1fc5821cb',
 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/mhough/neurofedora/conglomerate',
 'isolation': 'default',
 'memory_reqs': 2048,
 'package_name': 'conglomerate',
 'package_version': '1.6.80-1.20120308git166303d',
 'project_dirname': 'neurofedora',
 'project_name': 'neurofedora',
 'project_owner': 'mhough',
 'repo_priority': None,
 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/mhough/neurofedora/fedora-44-x86_64/',
            'id': 'copr_base',
            'name': 'Copr repository',
            'priority': None,
            'repo_gpgcheck': False}],
 'sandbox': 'mhough/neurofedora--mhough',
 'source_json': {},
 'source_type': None,
 'ssh_public_keys': None,
 'storage': 0,
 'submitter': 'mhough',
 'tags': [],
 'task_id': '11031717-fedora-44-x86_64',
 'timeout': 86400,
 'uses_devel_repo': False,
 'with_opts': [],
 'without_opts': []}

Running: git clone https://copr-dist-git.fedorainfracloud.org/git/mhough/neurofedora/conglomerate /var/lib/copr-rpmbuild/workspace/workdir-hywy6c6x/conglomerate --depth 500 --no-single-branch --recursive

cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/mhough/neurofedora/conglomerate', '/var/lib/copr-rpmbuild/workspace/workdir-hywy6c6x/conglomerate', '--depth', '500', '--no-single-branch', '--recursive']
cwd: .
rc: 0
stdout: 
stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-hywy6c6x/conglomerate'...

Running: git checkout be8a75149935cc4424e6a5efe39024d1fc5821cb --

cmd: ['git', 'checkout', 'be8a75149935cc4424e6a5efe39024d1fc5821cb', '--']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-hywy6c6x/conglomerate
rc: 0
stdout: 
stderr: Note: switching to 'be8a75149935cc4424e6a5efe39024d1fc5821cb'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:

  git switch -c <new-branch-name>

Or undo this operation with:

  git switch -

Turn off this advice by setting config variable advice.detachedHead to false

HEAD is now at be8a751 automatic import of conglomerate

Running: dist-git-client sources

cmd: ['dist-git-client', 'sources']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-hywy6c6x/conglomerate
rc: 0
stdout: 
stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD
INFO: Reading stdout from command: git rev-parse HEAD
INFO: Reading sources specification file: sources
INFO: Downloading conglomerate-166303d.tar.gz
INFO: Reading stdout from command: curl --help all
INFO: Calling: curl -H Pragma: -H 'Accept-Encoding: identity' -o conglomerate-166303d.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/mhough/neurofedora/conglomerate/conglomerate-166303d.tar.gz/md5/c98960361683829b3f6ca53f3fdd19ae/conglomerate-166303d.tar.gz
  % Total    % Received % Xferd  Average Speed  Time    Time    Time   Current
                                 Dload  Upload  Total   Spent   Left   Speed
100 452.6k 100 452.6k   0      0 26.48M      0                              0
INFO: Reading stdout from command: md5sum conglomerate-166303d.tar.gz
INFO: Downloading mni-acmacros.tar.gz
INFO: Calling: curl -H Pragma: -H 'Accept-Encoding: identity' -o mni-acmacros.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/mhough/neurofedora/conglomerate/mni-acmacros.tar.gz/md5/319aef208dbf53a6eeede74b258d993d/mni-acmacros.tar.gz
  % Total    % Received % Xferd  Average Speed  Time    Time    Time   Current
                                 Dload  Upload  Total   Spent   Left   Speed
100  12464 100  12464   0      0  1.26M      0                              0
INFO: Reading stdout from command: md5sum mni-acmacros.tar.gz

tail: /var/lib/copr-rpmbuild/main.log: file truncated
Running (timeout=86400): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-hywy6c6x/conglomerate/conglomerate.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-hywy6c6x/conglomerate --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1790274036.249598 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 6.8 starting (python version = 3.14.5, NVR = mock-6.8-1.fc44), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-hywy6c6x/conglomerate/conglomerate.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-hywy6c6x/conglomerate --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1790274036.249598 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
Start(bootstrap): init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish(bootstrap): init plugins
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-hywy6c6x/conglomerate/conglomerate.spec)  Config(fedora-44-x86_64)
Start: clean chroot
Finish: clean chroot
Mock Version: 6.8
INFO: Mock Version: 6.8
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-44-x86_64-bootstrap-1790274036.249598/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
INFO: Guessed host environment type: unknown
INFO: Using container image: registry.fedoraproject.org/fedora:44
INFO: Pulling image: registry.fedoraproject.org/fedora:44
INFO: Tagging container image as mock-bootstrap-2bfd9eea-2983-451f-bc20-23757a88cc20
INFO: Checking that 3601f0659f2bd8edc02c0ad168d94493d1ff1704db82f6efff5912a692461e90 image matches host's architecture
INFO: Copy content of container 3601f0659f2bd8edc02c0ad168d94493d1ff1704db82f6efff5912a692461e90 to /var/lib/mock/fedora-44-x86_64-bootstrap-1790274036.249598/root
INFO: mounting 3601f0659f2bd8edc02c0ad168d94493d1ff1704db82f6efff5912a692461e90 with podman image mount
INFO: image 3601f0659f2bd8edc02c0ad168d94493d1ff1704db82f6efff5912a692461e90 as /var/lib/containers/storage/overlay/09151f9988c6543ca3edf47584eab0a2e2c6a2ea3500093032922ed9cfd3d388/merged
INFO: umounting image 3601f0659f2bd8edc02c0ad168d94493d1ff1704db82f6efff5912a692461e90 (/var/lib/containers/storage/overlay/09151f9988c6543ca3edf47584eab0a2e2c6a2ea3500093032922ed9cfd3d388/merged) with podman image umount
INFO: Removing image mock-bootstrap-2bfd9eea-2983-451f-bc20-23757a88cc20
INFO: Package manager dnf5 detected and used (fallback)
INFO: Not updating bootstrap chroot, bootstrap_image_ready=True
Start(bootstrap): creating root cache
Finish(bootstrap): creating root cache
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-44-x86_64-1790274036.249598/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Package manager dnf5 detected and used (direct choice)
INFO: Buildroot is handled by package management downloaded with a bootstrap image:
  rpm-6.0.2-1.fc44.x86_64
  rpm-sequoia-1.10.3-1.fc44.x86_64
  dnf5-5.4.5.0-1.fc44.x86_64
  dnf5-plugins-5.4.5.0-1.fc44.x86_64
Start: installing minimal buildroot with dnf5
Updating and loading repositories:
 updates                                100% |  13.5 MiB/s |  11.9 MiB |  00m01s
 Copr repository                        100% |   1.1 MiB/s | 636.2 KiB |  00m01s
 fedora                                 100% |  32.3 MiB/s |  39.1 MiB |  00m01s
Repositories loaded.
Package                            Arch   Version                      Repository      Size
Installing group/module packages:
 bash                              x86_64 0:5.3.9-3.fc44               fedora       8.5 MiB
 bzip2                             x86_64 0:1.0.8-23.fc44              fedora      95.0 KiB
 coreutils                         x86_64 0:9.10-5.fc44                updates      5.7 MiB
 cpio                              x86_64 0:2.15-9.fc44                fedora       1.1 MiB
 diffutils                         x86_64 0:3.12-5.fc44                fedora       1.6 MiB
 fedora-release-common             noarch 0:44-18                      updates     20.6 KiB
 findutils                         x86_64 1:4.10.0-7.fc44              fedora       1.9 MiB
 gawk                              x86_64 0:5.3.2-3.fc44               fedora       1.8 MiB
 glibc-minimal-langpack            x86_64 0:2.43-8.fc44                updates      0.0   B
 grep                              x86_64 0:3.12-3.fc44                fedora       1.0 MiB
 gzip                              x86_64 0:1.14-2.fc44                fedora     401.6 KiB
 info                              x86_64 0:7.2-9.fc44                 fedora     365.6 KiB
 patch                             x86_64 0:2.8-4.fc44                 fedora     226.6 KiB
 redhat-rpm-config                 noarch 0:344-2.fc44                 updates    183.7 KiB
 rpm-build                         x86_64 0:6.0.2-1.fc44               updates    294.6 KiB
 sed                               x86_64 0:4.9-7.fc44                 fedora     857.2 KiB
 shadow-utils                      x86_64 2:4.19.0-7.fc44              updates      4.0 MiB
 tar                               x86_64 2:1.35-9.fc44                updates      3.0 MiB
 unzip                             x86_64 0:6.0-69.fc44                fedora     445.8 KiB
 util-linux                        x86_64 0:2.41.5-1.fc44              updates      3.5 MiB
 which                             x86_64 0:2.25-1.fc44                updates     83.6 KiB
 xz                                x86_64 1:5.8.2-2.fc44               fedora       1.3 MiB
Installing dependencies:
 R-srpm-macros                     noarch 0:1.3.7-2.fc44               updates      3.5 KiB
 add-determinism                   x86_64 0:0.7.3-2.fc44               updates      2.2 MiB
 alternatives                      x86_64 0:1.33-5.fc44                fedora      62.1 KiB
 ansible-srpm-macros               noarch 0:1-20.1.fc44                fedora      35.7 KiB
 audit-libs                        x86_64 0:4.2.1-1.fc44               updates    390.5 KiB
 binutils                          x86_64 0:2.46.1-1.fc44              updates     28.2 MiB
 build-reproducibility-srpm-macros noarch 0:0.7.3-2.fc44               updates      1.2 KiB
 bzip2-libs                        x86_64 0:1.0.8-23.fc44              fedora      80.5 KiB
 ca-certificates                   noarch 0:2026.2.90_v9.0.317-1.fc44  updates      2.7 MiB
 cmake-srpm-macros                 noarch 0:4.3.0-1.fc44               fedora     524.0   B
 coreutils-common                  x86_64 0:9.10-5.fc44                updates     10.7 MiB
 crypto-policies                   noarch 0:20251128-3.git19878fe.fc44 fedora     132.6 KiB
 curl                              x86_64 0:8.18.0-10.fc44             updates    480.0 KiB
 cyrus-sasl-lib                    x86_64 0:2.1.28-35.fc44             fedora       2.3 MiB
 debugedit                         x86_64 0:5.3-2.fc44                 updates    220.8 KiB
 dwz                               x86_64 0:0.16-3.fc44                fedora     290.9 KiB
 ed                                x86_64 0:1.22.5-2.fc44              fedora     149.7 KiB
 efi-srpm-macros                   noarch 0:6-6.fc44                   fedora      40.2 KiB
 elfutils                          x86_64 0:0.196-1.fc44               updates      3.2 MiB
 elfutils-debuginfod-client        x86_64 0:0.196-1.fc44               updates     83.8 KiB
 elfutils-default-yama-scope       noarch 0:0.196-1.fc44               updates      1.8 KiB
 elfutils-libelf                   x86_64 0:0.196-1.fc44               updates      1.4 MiB
 elfutils-libs                     x86_64 0:0.196-1.fc44               updates    715.4 KiB
 erlang-srpm-macros                noarch 0:0.3.11-1.fc44              fedora       1.9 KiB
 fedora-gpg-keys                   noarch 0:44-2                       updates    257.6 KiB
 fedora-release                    noarch 0:44-18                      updates      0.0   B
 fedora-release-identity-basic     noarch 0:44-18                      updates    629.0   B
 fedora-repos                      noarch 0:44-2                       updates      4.9 KiB
 file                              x86_64 0:5.46-10.fc44               updates    100.1 KiB
 file-libs                         x86_64 0:5.46-10.fc44               updates     11.9 MiB
 filesystem                        x86_64 0:3.18-52.fc44               fedora     112.0   B
 filesystem-srpm-macros            noarch 0:3.18-52.fc44               fedora      38.2 KiB
 fonts-srpm-macros                 noarch 1:5.0.0-2.fc44               fedora      55.8 KiB
 forge-srpm-macros                 noarch 0:0.4.0-4.fc44               fedora      38.9 KiB
 fpc-srpm-macros                   noarch 0:1.3-16.fc44                fedora     144.0   B
 gap-srpm-macros                   noarch 0:2-2.fc44                   fedora       2.1 KiB
 gdb-minimal                       x86_64 0:17.2-2.fc44                updates     14.2 MiB
 gdbm-libs                         x86_64 1:1.23-11.fc44               fedora     129.6 KiB
 ghc-srpm-macros                   noarch 0:1.10-1.fc44                fedora     792.0   B
 glibc                             x86_64 0:2.43-8.fc44                updates      6.9 MiB
 glibc-common                      x86_64 0:2.43-8.fc44                updates      1.0 MiB
 glibc-gconv-extra                 x86_64 0:2.43-8.fc44                updates      7.4 MiB
 gmp                               x86_64 1:6.3.0-5.fc44               fedora     815.2 KiB
 gnat-srpm-macros                  noarch 0:7-2.fc44                   fedora       1.0 KiB
 gnome-srpm-macros                 noarch 0:1.0-1.fc44                 updates      3.5 KiB
 gnulib-l10n                       noarch 0:20241231-2.fc44            fedora     655.0 KiB
 gnupg2                            x86_64 0:2.4.9-16.fc44              updates      6.5 MiB
 gnupg2-dirmngr                    x86_64 0:2.4.9-16.fc44              updates    634.0 KiB
 gnupg2-gpg-agent                  x86_64 0:2.4.9-16.fc44              updates    686.6 KiB
 gnupg2-gpgconf                    x86_64 0:2.4.9-16.fc44              updates    249.7 KiB
 gnupg2-keyboxd                    x86_64 0:2.4.9-16.fc44              updates    201.2 KiB
 gnupg2-verify                     x86_64 0:2.4.9-16.fc44              updates    360.3 KiB
 gnutls                            x86_64 0:3.8.13-1.fc44              updates      3.8 MiB
 go-srpm-macros                    noarch 0:3.8.0-2.fc44               fedora      61.9 KiB
 gpgverify                         noarch 0:2.2-4.fc44                 fedora       8.7 KiB
 ima-evm-utils-libs                x86_64 0:1.6.2-8.fc44               fedora      60.6 KiB
 jansson                           x86_64 0:2.14-4.fc44                fedora      88.9 KiB
 java-srpm-macros                  noarch 0:1-8.fc44                   fedora     870.0   B
 json-c                            x86_64 0:0.18-8.fc44                fedora      82.6 KiB
 kernel-srpm-macros                noarch 0:1.0-28.fc44                fedora       1.9 KiB
 keyutils-libs                     x86_64 0:1.6.3-7.fc44               fedora      54.2 KiB
 krb5-libs                         x86_64 0:1.22.2-4.fc44              updates      2.4 MiB
 libacl                            x86_64 0:2.4.0-1.fc44               updates     39.9 KiB
 libarchive                        x86_64 0:3.8.7-1.fc44               updates      1.0 MiB
 libassuan                         x86_64 0:2.5.7-5.fc44               fedora     163.8 KiB
 libattr                           x86_64 0:2.6.0-1.fc44               updates     24.3 KiB
 libblkid                          x86_64 0:2.41.5-1.fc44              updates    274.3 KiB
 libbrotli                         x86_64 0:1.2.0-3.fc44               fedora     865.0 KiB
 libcap                            x86_64 0:2.78-1.fc44                updates    212.1 KiB
 libcap-ng                         x86_64 0:0.9.6-1.fc44               updates     68.8 KiB
 libcbor                           x86_64 0:0.13.0-2.fc44              fedora      79.5 KiB
 libcom_err                        x86_64 0:1.47.3-4.fc44              fedora      63.0 KiB
 libcurl                           x86_64 0:8.18.0-10.fc44             updates      1.0 MiB
 libeconf                          x86_64 0:0.7.9-3.fc44               fedora      64.8 KiB
 libevent                          x86_64 0:2.1.13-1.fc44              updates    980.7 KiB
 libfdisk                          x86_64 0:2.41.5-1.fc44              updates    388.3 KiB
 libffi                            x86_64 0:3.5.2-2.fc44               fedora      87.7 KiB
 libfido2                          x86_64 0:1.16.0-5.fc44              fedora     246.4 KiB
 libfsverity                       x86_64 0:1.6-4.fc44                 fedora      28.4 KiB
 libgcc                            x86_64 0:16.2.1-2.fc44              updates    270.6 KiB
 libgcrypt                         x86_64 0:1.12.2-1.fc44              updates      1.7 MiB
 libgomp                           x86_64 0:16.2.1-2.fc44              updates    577.5 KiB
 libgpg-error                      x86_64 0:1.58-2.fc44                fedora     941.6 KiB
 libidn2                           x86_64 0:2.3.8-3.fc44               fedora     556.4 KiB
 libksba                           x86_64 0:1.6.7-5.fc44               fedora     414.4 KiB
 liblastlog2                       x86_64 0:2.41.5-1.fc44              updates     41.6 KiB
 libmount                          x86_64 0:2.41.5-1.fc44              updates    392.6 KiB
 libnghttp2                        x86_64 0:1.68.0-5.fc44              updates    166.1 KiB
 libnghttp3                        x86_64 0:1.18.0-1.fc44              updates    163.4 KiB
 libpfm                            x86_64 0:4.13.0-20.fc44             updates      1.7 MiB
 libpkgconf                        x86_64 0:2.5.1-1.fc44               fedora      90.1 KiB
 libpsl                            x86_64 0:0.21.5-7.fc44              fedora      76.3 KiB
 libselinux                        x86_64 0:3.11-2.fc44                updates    205.2 KiB
 libselinux-utils                  x86_64 0:3.11-2.fc44                updates    305.8 KiB
 libsemanage                       x86_64 0:3.11-1.fc44                updates    316.4 KiB
 libsepol                          x86_64 0:3.11-1.fc44                updates    862.1 KiB
 libsmartcols                      x86_64 0:2.41.5-1.fc44              updates    188.3 KiB
 libssh                            x86_64 0:0.12.2-1.fc44              updates    725.5 KiB
 libssh-config                     noarch 0:0.12.2-1.fc44              updates    277.0   B
 libstdc++                         x86_64 0:16.2.1-2.fc44              updates      3.1 MiB
 libtasn1                          x86_64 0:4.21.0-1.fc44              fedora     180.6 KiB
 libtool-ltdl                      x86_64 0:2.5.4-10.fc44              fedora      70.0 KiB
 libunistring                      x86_64 0:1.1-11.fc44                fedora       1.7 MiB
 libusb1                           x86_64 0:1.0.30-1.fc44              updates    176.0 KiB
 libuuid                           x86_64 0:2.41.5-1.fc44              updates     37.2 KiB
 libverto                          x86_64 0:0.3.2-12.fc44              fedora      25.3 KiB
 libxcrypt                         x86_64 0:4.5.2-3.fc44               fedora     293.2 KiB
 libxml2                           x86_64 0:2.12.10-6.fc44             fedora       1.8 MiB
 libzstd                           x86_64 0:1.5.7-5.fc44               fedora     956.1 KiB
 linkdupes                         x86_64 0:0.7.3-2.fc44               updates    780.9 KiB
 lua-libs                          x86_64 0:5.4.8-5.fc44               fedora     281.7 KiB
 lua-srpm-macros                   noarch 0:1-17.fc44                  fedora       1.3 KiB
 lz4-libs                          x86_64 0:1.10.0-4.fc44              fedora     157.3 KiB
 mpfr                              x86_64 0:4.2.2-3.fc44               fedora     849.1 KiB
 ncurses-base                      noarch 0:6.6-1.fc44                 fedora     329.7 KiB
 ncurses-libs                      x86_64 0:6.6-1.fc44                 fedora     968.9 KiB
 nettle                            x86_64 0:3.10.1-3.fc44              fedora     794.3 KiB
 ngtcp2                            x86_64 0:1.22.1-1.fc44              updates    338.2 KiB
 ngtcp2-crypto-ossl                x86_64 0:1.22.1-1.fc44              updates     51.6 KiB
 npth                              x86_64 0:1.8-4.fc44                 fedora      49.5 KiB
 ocaml-srpm-macros                 noarch 0:11-3.fc44                  fedora       1.9 KiB
 openblas-srpm-macros              noarch 0:2-21.fc44                  fedora     112.0   B
 openldap                          x86_64 0:2.6.14-1.fc44              updates    670.9 KiB
 openssl-libs                      x86_64 1:3.5.8-1.fc44               updates      9.2 MiB
 p11-kit                           x86_64 0:0.26.5-1.fc44              updates      2.6 MiB
 p11-kit-trust                     x86_64 0:0.26.5-1.fc44              updates    478.3 KiB
 package-notes-srpm-macros         noarch 0:0.20-1.fc44                updates      1.6 KiB
 pam-libs                          x86_64 0:1.7.2-2.fc44               updates    130.5 KiB
 pcre2                             x86_64 0:10.47-1.fc44.1             fedora     718.6 KiB
 pcre2-syntax                      noarch 0:10.47-1.fc44.1             fedora     281.9 KiB
 perl-srpm-macros                  noarch 0:1-61.fc44                  fedora     861.0   B
 pkgconf                           x86_64 0:2.5.1-1.fc44               fedora      92.7 KiB
 pkgconf-m4                        noarch 0:2.5.1-1.fc44               fedora      14.3 KiB
 pkgconf-pkg-config                x86_64 0:2.5.1-1.fc44               fedora     989.0   B
 policycoreutils                   x86_64 0:3.11-2.fc44                updates    884.8 KiB
 popt                              x86_64 0:1.19-10.fc44               fedora     132.6 KiB
 publicsuffix-list-dafsa           noarch 0:20260116-1.fc44            fedora      70.4 KiB
 pyproject-srpm-macros             noarch 0:1.23.2-1.fc44              updates      3.4 KiB
 python-srpm-macros                noarch 0:3.14-12.fc44               fedora      51.6 KiB
 qt5-srpm-macros                   noarch 0:5.15.18-2.fc44             fedora     500.0   B
 qt6-srpm-macros                   noarch 0:6.11.2-1.fc44              updates    472.0   B
 readline                          x86_64 0:8.3-4.fc44                 fedora     519.5 KiB
 rpm                               x86_64 0:6.0.2-1.fc44               updates      3.1 MiB
 rpm-build-libs                    x86_64 0:6.0.2-1.fc44               updates    276.3 KiB
 rpm-libs                          x86_64 0:6.0.2-1.fc44               updates    961.2 KiB
 rpm-plugin-selinux                x86_64 0:6.0.2-1.fc44               updates     11.9 KiB
 rpm-sequoia                       x86_64 0:1.10.3-1.fc44              updates      2.4 MiB
 rpm-sign-libs                     x86_64 0:6.0.2-1.fc44               updates     39.6 KiB
 rust-srpm-macros                  noarch 0:28.5-1.fc44                updates      5.5 KiB
 selinux-policy                    noarch 0:44.10-1.fc44               updates     32.1 KiB
 selinux-policy-targeted           noarch 0:44.10-1.fc44               updates     18.6 MiB
 setup                             noarch 0:2.15.0-28.fc44             fedora     724.9 KiB
 sqlite-libs                       x86_64 0:3.51.2-2.fc44              updates      1.6 MiB
 systemd-libs                      x86_64 0:259.9-1.fc44               updates      2.4 MiB
 systemd-standalone-sysusers       x86_64 0:259.9-1.fc44               updates    305.7 KiB
 tpm2-tss                          x86_64 0:4.1.3-9.fc44               fedora       1.6 MiB
 tree-sitter-srpm-macros           noarch 0:0.4.2-2.fc44               fedora       8.3 KiB
 util-linux-core                   x86_64 0:2.41.5-1.fc44              updates      1.5 MiB
 xxhash-libs                       x86_64 0:0.8.3-4.fc44               fedora      94.0 KiB
 xz-libs                           x86_64 1:5.8.2-2.fc44               fedora     217.7 KiB
 zig-srpm-macros                   noarch 0:1-8.fc44                   fedora       1.3 KiB
 zip                               x86_64 0:3.0-45.fc44                fedora     698.0 KiB
 zlib-ng-compat                    x86_64 0:2.3.3-3.fc44               fedora     165.6 KiB
 zstd                              x86_64 0:1.5.7-5.fc44               fedora     502.4 KiB
Installing groups:
 Buildsystem building group                                                                

Transaction Summary:
 Installing:       186 packages

Total size of inbound packages is 69 MiB. Need to download 69 MiB.
After this operation, 227 MiB extra will be used (install 227 MiB, remove 0 B).
[  1/186] cpio-0:2.15-9.fc44.x86_64     100% |  19.1 MiB/s | 293.3 KiB |  00m00s
[  2/186] bzip2-0:1.0.8-23.fc44.x86_64  100% |   3.0 MiB/s |  52.1 KiB |  00m00s
[  3/186] diffutils-0:3.12-5.fc44.x86_6 100% |  24.1 MiB/s | 395.3 KiB |  00m00s
[  4/186] bash-0:5.3.9-3.fc44.x86_64    100% |  54.1 MiB/s |   1.9 MiB |  00m00s
[  5/186] findutils-1:4.10.0-7.fc44.x86 100% |  30.0 MiB/s | 552.5 KiB |  00m00s
[  6/186] grep-0:3.12-3.fc44.x86_64     100% |  58.9 MiB/s | 301.6 KiB |  00m00s
[  7/186] gzip-0:1.14-2.fc44.x86_64     100% |  35.0 MiB/s | 179.1 KiB |  00m00s
[  8/186] info-0:7.2-9.fc44.x86_64      100% |  36.5 MiB/s | 186.7 KiB |  00m00s
[  9/186] patch-0:2.8-4.fc44.x86_64     100% |  22.5 MiB/s | 115.2 KiB |  00m00s
[ 10/186] unzip-0:6.0-69.fc44.x86_64    100% |  48.7 MiB/s | 199.6 KiB |  00m00s
[ 11/186] sed-0:4.9-7.fc44.x86_64       100% |  51.9 MiB/s | 319.2 KiB |  00m00s
[ 12/186] xz-1:5.8.2-2.fc44.x86_64      100% |  74.1 MiB/s | 607.2 KiB |  00m00s
[ 13/186] fedora-release-common-0:44-18 100% |   3.8 MiB/s |  23.6 KiB |  00m00s
[ 14/186] coreutils-0:9.10-5.fc44.x86_6 100% | 118.1 MiB/s |   1.2 MiB |  00m00s
[ 15/186] glibc-minimal-langpack-0:2.43 100% |  20.3 MiB/s |  83.3 KiB |  00m00s
[ 16/186] rpm-build-0:6.0.2-1.fc44.x86_ 100% |  19.1 MiB/s | 136.8 KiB |  00m00s
[ 17/186] gawk-0:5.3.2-3.fc44.x86_64    100% |  75.7 MiB/s |   1.1 MiB |  00m00s
[ 18/186] redhat-rpm-config-0:344-2.fc4 100% |   6.4 MiB/s |  78.1 KiB |  00m00s
[ 19/186] tar-2:1.35-9.fc44.x86_64      100% | 141.6 MiB/s | 870.0 KiB |  00m00s
[ 20/186] shadow-utils-2:4.19.0-7.fc44. 100% | 108.2 MiB/s |   1.3 MiB |  00m00s
[ 21/186] which-0:2.25-1.fc44.x86_64    100% |  10.3 MiB/s |  42.1 KiB |  00m00s
[ 22/186] util-linux-0:2.41.5-1.fc44.x8 100% |  86.0 MiB/s |   1.2 MiB |  00m00s
[ 23/186] ncurses-libs-0:6.6-1.fc44.x86 100% |  56.0 MiB/s | 344.1 KiB |  00m00s
[ 24/186] bzip2-libs-0:1.0.8-23.fc44.x8 100% |   7.1 MiB/s |  43.8 KiB |  00m00s
[ 25/186] filesystem-0:3.18-52.fc44.x86 100% | 111.2 MiB/s |   1.3 MiB |  00m00s
[ 26/186] ed-0:1.22.5-2.fc44.x86_64     100% |  20.8 MiB/s |  85.4 KiB |  00m00s
[ 27/186] pcre2-0:10.47-1.fc44.1.x86_64 100% |  33.9 MiB/s | 277.7 KiB |  00m00s
[ 28/186] xz-libs-1:5.8.2-2.fc44.x86_64 100% |  22.8 MiB/s | 116.8 KiB |  00m00s
[ 29/186] gmp-1:6.3.0-5.fc44.x86_64     100% |  63.0 MiB/s | 322.5 KiB |  00m00s
[ 30/186] mpfr-0:4.2.2-3.fc44.x86_64    100% |  58.2 MiB/s | 357.8 KiB |  00m00s
[ 31/186] coreutils-common-0:9.10-5.fc4 100% | 152.3 MiB/s |   2.1 MiB |  00m00s
[ 32/186] readline-0:8.3-4.fc44.x86_64  100% |  37.4 MiB/s | 229.8 KiB |  00m00s
[ 33/186] glibc-common-0:2.43-8.fc44.x8 100% |  52.1 MiB/s | 373.3 KiB |  00m00s
[ 34/186] gnome-srpm-macros-0:1.0-1.fc4 100% |   2.1 MiB/s |   8.7 KiB |  00m00s
[ 35/186] ansible-srpm-macros-0:1-20.1. 100% |   3.9 MiB/s |  20.1 KiB |  00m00s
[ 36/186] cmake-srpm-macros-0:4.3.0-1.f 100% |   3.4 MiB/s |  10.4 KiB |  00m00s
[ 37/186] erlang-srpm-macros-0:0.3.11-1 100% |   1.9 MiB/s |  10.0 KiB |  00m00s
[ 38/186] efi-srpm-macros-0:6-6.fc44.no 100% |   3.7 MiB/s |  22.6 KiB |  00m00s
[ 39/186] dwz-0:0.16-3.fc44.x86_64      100% |  17.0 MiB/s | 138.9 KiB |  00m00s
[ 40/186] filesystem-srpm-macros-0:3.18 100% |   6.5 MiB/s |  26.6 KiB |  00m00s
[ 41/186] fonts-srpm-macros-1:5.0.0-2.f 100% |   8.9 MiB/s |  27.4 KiB |  00m00s
[ 42/186] forge-srpm-macros-0:0.4.0-4.f 100% |   6.5 MiB/s |  20.0 KiB |  00m00s
[ 43/186] fpc-srpm-macros-0:1.3-16.fc44 100% |   1.9 MiB/s |   7.9 KiB |  00m00s
[ 44/186] ghc-srpm-macros-0:1.10-1.fc44 100% |   2.9 MiB/s |   8.8 KiB |  00m00s
[ 45/186] gap-srpm-macros-0:2-2.fc44.no 100% | 914.1 KiB/s |   9.1 KiB |  00m00s
[ 46/186] go-srpm-macros-0:3.8.0-2.fc44 100% |   3.9 MiB/s |  28.2 KiB |  00m00s
[ 47/186] gnat-srpm-macros-0:7-2.fc44.n 100% |   1.1 MiB/s |   8.7 KiB |  00m00s
[ 48/186] java-srpm-macros-0:1-8.fc44.n 100% |   2.6 MiB/s |   8.1 KiB |  00m00s
[ 49/186] kernel-srpm-macros-0:1.0-28.f 100% |   1.8 MiB/s |   9.0 KiB |  00m00s
[ 50/186] lua-srpm-macros-0:1-17.fc44.n 100% |   1.4 MiB/s |   8.9 KiB |  00m00s
[ 51/186] ocaml-srpm-macros-0:11-3.fc44 100% |   1.8 MiB/s |   9.3 KiB |  00m00s
[ 52/186] openblas-srpm-macros-0:2-21.f 100% |   2.5 MiB/s |   7.8 KiB |  00m00s
[ 53/186] perl-srpm-macros-0:1-61.fc44. 100% |   2.1 MiB/s |   8.4 KiB |  00m00s
[ 54/186] python-srpm-macros-0:3.14-12. 100% |   5.9 MiB/s |  24.0 KiB |  00m00s
[ 55/186] qt5-srpm-macros-0:5.15.18-2.f 100% |   2.8 MiB/s |   8.7 KiB |  00m00s
[ 56/186] tree-sitter-srpm-macros-0:0.4 100% |   3.3 MiB/s |  13.5 KiB |  00m00s
[ 57/186] zig-srpm-macros-0:1-8.fc44.no 100% |   2.9 MiB/s |   8.8 KiB |  00m00s
[ 58/186] zip-0:3.0-45.fc44.x86_64      100% |  64.5 MiB/s | 264.4 KiB |  00m00s
[ 59/186] rpm-0:6.0.2-1.fc44.x86_64     100% | 140.7 MiB/s | 576.1 KiB |  00m00s
[ 60/186] popt-0:1.19-10.fc44.x86_64    100% |  16.3 MiB/s |  66.9 KiB |  00m00s
[ 61/186] zstd-0:1.5.7-5.fc44.x86_64    100% |  62.7 MiB/s | 192.5 KiB |  00m00s
[ 62/186] libeconf-0:0.7.9-3.fc44.x86_6 100% |  11.8 MiB/s |  36.2 KiB |  00m00s
[ 63/186] libxcrypt-0:4.5.2-3.fc44.x86_ 100% |  42.7 MiB/s | 131.2 KiB |  00m00s
[ 64/186] setup-0:2.15.0-28.fc44.noarch 100% |  38.4 MiB/s | 157.2 KiB |  00m00s
[ 65/186] zlib-ng-compat-0:2.3.3-3.fc44 100% |  22.2 MiB/s |  91.1 KiB |  00m00s
[ 66/186] util-linux-core-0:2.41.5-1.fc 100% |  90.8 MiB/s | 558.1 KiB |  00m00s
[ 67/186] ncurses-base-0:6.6-1.fc44.noa 100% |  10.7 MiB/s |  88.0 KiB |  00m00s
[ 68/186] pcre2-syntax-0:10.47-1.fc44.1 100% |  23.0 MiB/s | 164.7 KiB |  00m00s
[ 69/186] gnulib-l10n-0:20241231-2.fc44 100% |  24.5 MiB/s | 150.3 KiB |  00m00s
[ 70/186] rpm-libs-0:6.0.2-1.fc44.x86_6 100% | 134.5 MiB/s | 413.1 KiB |  00m00s
[ 71/186] libzstd-0:1.5.7-5.fc44.x86_64 100% |  50.8 MiB/s | 364.2 KiB |  00m00s
[ 72/186] glibc-0:2.43-8.fc44.x86_64    100% | 139.3 MiB/s |   2.4 MiB |  00m00s
[ 73/186] lua-libs-0:5.4.8-5.fc44.x86_6 100% |  13.3 MiB/s | 136.6 KiB |  00m00s
[ 74/186] glibc-gconv-extra-0:2.43-8.fc 100% | 108.5 MiB/s |   1.6 MiB |  00m00s
[ 75/186] rpm-build-libs-0:6.0.2-1.fc44 100% |  42.2 MiB/s | 129.7 KiB |  00m00s
[ 76/186] rpm-sign-libs-0:6.0.2-1.fc44. 100% |   8.4 MiB/s |  25.8 KiB |  00m00s
[ 77/186] ima-evm-utils-libs-0:1.6.2-8. 100% |   5.9 MiB/s |  30.0 KiB |  00m00s
[ 78/186] tpm2-tss-0:4.1.3-9.fc44.x86_6 100% |  71.8 MiB/s | 440.9 KiB |  00m00s
[ 79/186] libfsverity-0:1.6-4.fc44.x86_ 100% |   2.7 MiB/s |  19.2 KiB |  00m00s
[ 80/186] json-c-0:0.18-8.fc44.x86_64   100% |   9.0 MiB/s |  46.3 KiB |  00m00s
[ 81/186] libgcc-0:16.2.1-2.fc44.x86_64 100% |  33.3 MiB/s | 136.3 KiB |  00m00s
[ 82/186] libusb1-0:1.0.30-1.fc44.x86_6 100% |  13.6 MiB/s |  83.4 KiB |  00m00s
[ 83/186] libstdc++-0:16.2.1-2.fc44.x86 100% | 100.0 MiB/s |   1.0 MiB |  00m00s
[ 84/186] libuuid-0:2.41.5-1.fc44.x86_6 100% |   3.8 MiB/s |  27.1 KiB |  00m00s
[ 85/186] libmount-0:2.41.5-1.fc44.x86_ 100% |  28.1 MiB/s | 172.4 KiB |  00m00s
[ 86/186] libacl-0:2.4.0-1.fc44.x86_64  100% |   4.4 MiB/s |  27.3 KiB |  00m00s
[ 87/186] libblkid-0:2.41.5-1.fc44.x86_ 100% |  21.1 MiB/s | 129.8 KiB |  00m00s
[ 88/186] libselinux-0:3.11-2.fc44.x86_ 100% |  25.5 MiB/s | 104.3 KiB |  00m00s
[ 89/186] libattr-0:2.6.0-1.fc44.x86_64 100% |   4.3 MiB/s |  17.8 KiB |  00m00s
[ 90/186] libsepol-0:3.11-1.fc44.x86_64 100% |  71.4 MiB/s | 365.3 KiB |  00m00s
[ 91/186] elfutils-libelf-0:0.196-1.fc4 100% |  46.5 MiB/s | 238.2 KiB |  00m00s
[ 92/186] elfutils-libs-0:0.196-1.fc44. 100% |  55.6 MiB/s | 284.5 KiB |  00m00s
[ 93/186] elfutils-0:0.196-1.fc44.x86_6 100% | 108.8 MiB/s | 668.6 KiB |  00m00s
[ 94/186] elfutils-debuginfod-client-0: 100% |  11.3 MiB/s |  46.5 KiB |  00m00s
[ 95/186] libsmartcols-0:2.41.5-1.fc44. 100% |  28.4 MiB/s |  87.4 KiB |  00m00s
[ 96/186] systemd-libs-0:259.9-1.fc44.x 100% | 169.7 MiB/s | 868.8 KiB |  00m00s
[ 97/186] libcap-ng-0:0.9.6-1.fc44.x86_ 100% |  11.3 MiB/s |  34.8 KiB |  00m00s
[ 98/186] audit-libs-0:4.2.1-1.fc44.x86 100% |  23.4 MiB/s | 143.6 KiB |  00m00s
[ 99/186] libfdisk-0:2.41.5-1.fc44.x86_ 100% |  54.9 MiB/s | 168.6 KiB |  00m00s
[100/186] liblastlog2-0:2.41.5-1.fc44.x 100% |   7.9 MiB/s |  24.2 KiB |  00m00s
[101/186] pam-libs-0:1.7.2-2.fc44.x86_6 100% |  14.3 MiB/s |  58.6 KiB |  00m00s
[102/186] libsemanage-0:3.11-1.fc44.x86 100% |  41.4 MiB/s | 127.3 KiB |  00m00s
[103/186] gnupg2-0:2.4.9-16.fc44.x86_64 100% | 165.4 MiB/s |   1.7 MiB |  00m00s
[104/186] gpgverify-0:2.2-4.fc44.noarch 100% |   1.2 MiB/s |  11.2 KiB |  00m00s
[105/186] gnupg2-dirmngr-0:2.4.9-16.fc4 100% |  30.5 MiB/s | 281.4 KiB |  00m00s
[106/186] gnupg2-gpgconf-0:2.4.9-16.fc4 100% |  19.0 MiB/s | 116.6 KiB |  00m00s
[107/186] gnupg2-keyboxd-0:2.4.9-16.fc4 100% |  23.6 MiB/s |  96.8 KiB |  00m00s
[108/186] gnupg2-gpg-agent-0:2.4.9-16.f 100% |  39.2 MiB/s | 281.2 KiB |  00m00s
[109/186] libassuan-0:2.5.7-5.fc44.x86_ 100% |  16.8 MiB/s |  68.9 KiB |  00m00s
[110/186] gnupg2-verify-0:2.4.9-16.fc44 100% |  34.4 MiB/s | 176.3 KiB |  00m00s
[111/186] libgpg-error-0:1.58-2.fc44.x8 100% |  49.6 MiB/s | 254.1 KiB |  00m00s
[112/186] npth-0:1.8-4.fc44.x86_64      100% |   2.8 MiB/s |  25.8 KiB |  00m00s
[113/186] libksba-0:1.6.7-5.fc44.x86_64 100% |  16.3 MiB/s | 167.4 KiB |  00m00s
[114/186] libcap-0:2.78-1.fc44.x86_64   100% |   8.6 MiB/s |  88.1 KiB |  00m00s
[115/186] rpm-sequoia-0:1.10.3-1.fc44.x 100% | 183.8 MiB/s | 940.9 KiB |  00m00s
[116/186] sqlite-libs-0:3.51.2-2.fc44.x 100% |  77.8 MiB/s | 796.6 KiB |  00m00s
[117/186] file-libs-0:5.46-10.fc44.x86_ 100% |  75.8 MiB/s | 853.6 KiB |  00m00s
[118/186] file-0:5.46-10.fc44.x86_64    100% |   5.9 MiB/s |  48.7 KiB |  00m00s
[119/186] libgomp-0:16.2.1-2.fc44.x86_6 100% |  77.7 MiB/s | 397.7 KiB |  00m00s
[120/186] alternatives-0:1.33-5.fc44.x8 100% |   8.0 MiB/s |  40.8 KiB |  00m00s
[121/186] jansson-0:2.14-4.fc44.x86_64  100% |   3.5 MiB/s |  47.1 KiB |  00m00s
[122/186] debugedit-0:5.3-2.fc44.x86_64 100% |   6.1 MiB/s |  87.8 KiB |  00m00s
[123/186] libarchive-0:3.8.7-1.fc44.x86 100% |  39.3 MiB/s | 442.4 KiB |  00m00s
[124/186] libxml2-0:2.12.10-6.fc44.x86_ 100% |  64.3 MiB/s | 724.6 KiB |  00m00s
[125/186] binutils-0:2.46.1-1.fc44.x86_ 100% | 134.3 MiB/s |   6.2 MiB |  00m00s
[126/186] pkgconf-pkg-config-0:2.5.1-1. 100% | 728.3 KiB/s |   9.5 KiB |  00m00s
[127/186] lz4-libs-0:1.10.0-4.fc44.x86_ 100% |   4.5 MiB/s |  77.7 KiB |  00m00s
[128/186] pkgconf-0:2.5.1-1.fc44.x86_64 100% |   9.5 MiB/s |  48.7 KiB |  00m00s
[129/186] libpkgconf-0:2.5.1-1.fc44.x86 100% |   8.3 MiB/s |  42.7 KiB |  00m00s
[130/186] pkgconf-m4-0:2.5.1-1.fc44.noa 100% |   2.2 MiB/s |  13.8 KiB |  00m00s
[131/186] curl-0:8.18.0-10.fc44.x86_64  100% |  39.1 MiB/s | 240.2 KiB |  00m00s
[132/186] R-srpm-macros-0:1.3.7-2.fc44. 100% |   1.8 MiB/s |  11.0 KiB |  00m00s
[133/186] build-reproducibility-srpm-ma 100% |   2.2 MiB/s |  13.3 KiB |  00m00s
[134/186] package-notes-srpm-macros-0:0 100% |   5.1 MiB/s |  10.4 KiB |  00m00s
[135/186] linkdupes-0:0.7.3-2.fc44.x86_ 100% |  67.3 MiB/s | 344.8 KiB |  00m00s
[136/186] add-determinism-0:0.7.3-2.fc4 100% | 119.2 MiB/s | 854.6 KiB |  00m00s
[137/186] pyproject-srpm-macros-0:1.23. 100% |   3.0 MiB/s |  15.5 KiB |  00m00s
[138/186] qt6-srpm-macros-0:6.11.2-1.fc 100% |   2.2 MiB/s |   9.1 KiB |  00m00s
[139/186] rust-srpm-macros-0:28.5-1.fc4 100% |   2.7 MiB/s |  11.2 KiB |  00m00s
[140/186] libgcrypt-0:1.12.2-1.fc44.x86 100% |  87.9 MiB/s | 629.8 KiB |  00m00s
[141/186] crypto-policies-0:20251128-3. 100% |  19.2 MiB/s |  98.3 KiB |  00m00s
[142/186] gnutls-0:3.8.13-1.fc44.x86_64 100% | 129.7 MiB/s |   1.4 MiB |  00m00s
[143/186] libidn2-0:2.3.8-3.fc44.x86_64 100% |  28.6 MiB/s | 175.6 KiB |  00m00s
[144/186] libtasn1-0:4.21.0-1.fc44.x86_ 100% |  14.8 MiB/s |  76.0 KiB |  00m00s
[145/186] openldap-0:2.6.14-1.fc44.x86_ 100% |  88.4 MiB/s | 271.5 KiB |  00m00s
[146/186] libunistring-0:1.1-11.fc44.x8 100% |  89.2 MiB/s | 547.8 KiB |  00m00s
[147/186] nettle-0:3.10.1-3.fc44.x86_64 100% |  52.3 MiB/s | 428.0 KiB |  00m00s
[148/186] libtool-ltdl-0:2.5.4-10.fc44. 100% |   5.2 MiB/s |  37.0 KiB |  00m00s
[149/186] gdbm-libs-1:1.23-11.fc44.x86_ 100% |  11.5 MiB/s |  58.8 KiB |  00m00s
[150/186] cyrus-sasl-lib-0:2.1.28-35.fc 100% |  65.2 MiB/s | 800.7 KiB |  00m00s
[151/186] fedora-repos-0:44-2.noarch    100% |   2.2 MiB/s |   9.1 KiB |  00m00s
[152/186] fedora-gpg-keys-0:44-2.noarch 100% |  30.5 MiB/s | 187.6 KiB |  00m00s
[153/186] elfutils-default-yama-scope-0 100% |   2.2 MiB/s |  11.3 KiB |  00m00s
[154/186] libpfm-0:4.13.0-20.fc44.x86_6 100% |  44.4 MiB/s | 227.3 KiB |  00m00s
[155/186] libevent-0:2.1.13-1.fc44.x86_ 100% |  70.6 MiB/s | 289.2 KiB |  00m00s
[156/186] p11-kit-0:0.26.5-1.fc44.x86_6 100% |  91.2 MiB/s | 560.6 KiB |  00m00s
[157/186] libffi-0:3.5.2-2.fc44.x86_64  100% |   6.9 MiB/s |  42.4 KiB |  00m00s
[158/186] p11-kit-trust-0:0.26.5-1.fc44 100% |  23.9 MiB/s | 146.5 KiB |  00m00s
[159/186] openssl-libs-1:3.5.8-1.fc44.x 100% | 249.8 MiB/s |   2.7 MiB |  00m00s
[160/186] fedora-release-0:44-18.noarch 100% |   1.2 MiB/s |  12.5 KiB |  00m00s
[161/186] systemd-standalone-sysusers-0 100% |  16.5 MiB/s | 151.8 KiB |  00m00s
[162/186] ca-certificates-0:2026.2.90_v 100% | 190.1 MiB/s | 973.3 KiB |  00m00s
[163/186] xxhash-libs-0:0.8.3-4.fc44.x8 100% |   4.5 MiB/s |  41.2 KiB |  00m00s
[164/186] fedora-release-identity-basic 100% |   3.2 MiB/s |  13.2 KiB |  00m00s
[165/186] libcurl-0:8.18.0-10.fc44.x86_ 100% |  89.0 MiB/s | 455.7 KiB |  00m00s
[166/186] libnghttp3-0:1.18.0-1.fc44.x8 100% |   9.2 MiB/s |  75.3 KiB |  00m00s
[167/186] libssh-0:0.12.2-1.fc44.x86_64 100% |  32.1 MiB/s | 295.9 KiB |  00m00s
[168/186] ngtcp2-0:1.22.1-1.fc44.x86_64 100% |  38.4 MiB/s | 157.4 KiB |  00m00s
[169/186] gdb-minimal-0:17.2-2.fc44.x86 100% | 157.9 MiB/s |   4.7 MiB |  00m00s
[170/186] libbrotli-0:1.2.0-3.fc44.x86_ 100% |  56.6 MiB/s | 347.8 KiB |  00m00s
[171/186] libpsl-0:0.21.5-7.fc44.x86_64 100% |  10.6 MiB/s |  65.3 KiB |  00m00s
[172/186] libssh-config-0:0.12.2-1.fc44 100% |   2.2 MiB/s |   8.9 KiB |  00m00s
[173/186] libfido2-0:1.16.0-5.fc44.x86_ 100% |  20.4 MiB/s | 104.5 KiB |  00m00s
[174/186] publicsuffix-list-dafsa-0:202 100% |  11.8 MiB/s |  60.3 KiB |  00m00s
[175/186] libcbor-0:0.13.0-2.fc44.x86_6 100% |   7.0 MiB/s |  36.0 KiB |  00m00s
[176/186] ngtcp2-crypto-ossl-0:1.22.1-1 100% |   6.8 MiB/s |  27.8 KiB |  00m00s
[177/186] rpm-plugin-selinux-0:6.0.2-1. 100% |   5.5 MiB/s |  17.0 KiB |  00m00s
[178/186] selinux-policy-0:44.10-1.fc44 100% |   6.4 MiB/s |  26.4 KiB |  00m00s
[179/186] policycoreutils-0:3.11-2.fc44 100% |  42.2 MiB/s | 259.0 KiB |  00m00s
[180/186] libselinux-utils-0:3.11-2.fc4 100% |  19.5 MiB/s | 119.7 KiB |  00m00s
[181/186] keyutils-libs-0:1.6.3-7.fc44. 100% |   6.2 MiB/s |  31.5 KiB |  00m00s
[182/186] krb5-libs-0:1.22.2-4.fc44.x86 100% |  71.3 MiB/s | 802.6 KiB |  00m00s
[183/186] libcom_err-0:1.47.3-4.fc44.x8 100% |   4.4 MiB/s |  27.1 KiB |  00m00s
[184/186] selinux-policy-targeted-0:44. 100% | 169.6 MiB/s |   6.8 MiB |  00m00s
[185/186] libnghttp2-0:1.68.0-5.fc44.x8 100% |   5.8 MiB/s |  76.6 KiB |  00m00s
[186/186] libverto-0:0.3.2-12.fc44.x86_ 100% |   1.5 MiB/s |  21.1 KiB |  00m00s
--------------------------------------------------------------------------------
[186/186] Total                         100% | 139.6 MiB/s |  69.4 MiB |  00m00s
Running transaction
Importing OpenPGP key 0x6D9F90A6:
 UserID     : "Fedora (44) <fedora-44-primary@fedoraproject.org>"
 Fingerprint: 36F612DCF27F7D1A48A835E4DBFCF71C6D9F90A6
 From       : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-44-primary
The key was successfully imported.
[  1/188] Verify package files          100% | 707.0   B/s | 186.0   B |  00m00s
[  2/188] Prepare transaction           100% |   3.6 KiB/s | 186.0   B |  00m00s
[  3/188] Installing libgcc-0:16.2.1-2. 100% | 266.0 MiB/s | 272.3 KiB |  00m00s
[  4/188] Installing publicsuffix-list- 100% |   0.0   B/s |  71.1 KiB |  00m00s
[  5/188] Installing libssh-config-0:0. 100% |   0.0   B/s | 816.0   B |  00m00s
[  6/188] Installing fedora-release-ide 100% | 867.2 KiB/s | 888.0   B |  00m00s
[  7/188] Installing fedora-gpg-keys-0: 100% |  49.6 MiB/s | 355.3 KiB |  00m00s
[  8/188] Installing fedora-repos-0:44- 100% |   0.0   B/s |   5.7 KiB |  00m00s
[  9/188] Installing fedora-release-com 100% |  24.3 MiB/s |  24.9 KiB |  00m00s
[ 10/188] Installing fedora-release-0:4 100% |  17.3 KiB/s | 124.0   B |  00m00s
>>> Running sysusers scriptlet: setup-0:2.15.0-28.fc44.noarch
>>> Finished sysusers scriptlet: setup-0:2.15.0-28.fc44.noarch
>>> Scriptlet output:
>>> Creating group 'adm' with GID 4.
>>> Creating group 'audio' with GID 63.
>>> Creating group 'cdrom' with GID 11.
>>> Creating group 'clock' with GID 103.
>>> Creating group 'dialout' with GID 18.
>>> Creating group 'disk' with GID 6.
>>> Creating group 'floppy' with GID 19.
>>> Creating group 'ftp' with GID 50.
>>> Creating group 'games' with GID 20.
>>> Creating group 'input' with GID 104.
>>> Creating group 'kmem' with GID 9.
>>> Creating group 'kvm' with GID 36.
>>> Creating group 'lock' with GID 54.
>>> Creating group 'lp' with GID 7.
>>> Creating group 'mail' with GID 12.
>>> Creating group 'man' with GID 15.
>>> Creating group 'mem' with GID 8.
>>> Creating group 'nobody' with GID 65534.
>>> Creating group 'render' with GID 105.
>>> Creating group 'root' with GID 0.
>>> Creating group 'sgx' with GID 106.
>>> Creating group 'sys' with GID 3.
>>> Creating group 'tape' with GID 33.
>>> Creating group 'tty' with GID 5.
>>> Creating group 'users' with GID 100.
>>> Creating group 'utmp' with GID 22.
>>> Creating group 'video' with GID 39.
>>> Creating group 'wheel' with GID 10.
>>> Creating user 'adm' (adm) with UID 3 and GID 4.
>>> Creating group 'bin' with GID 1.
>>> Creating user 'bin' (bin) with UID 1 and GID 1.
>>> Creating group 'daemon' with GID 2.
>>> Creating user 'daemon' (daemon) with UID 2 and GID 2.
>>> Creating user 'ftp' (FTP User) with UID 14 and GID 50.
>>> Creating user 'games' (games) with UID 12 and GID 100.
>>> Creating user 'halt' (halt) with UID 7 and GID 0.
>>> Creating user 'lp' (lp) with UID 4 and GID 7.
>>> Creating user 'mail' (mail) with UID 8 and GID 12.
>>> Creating user 'nobody' (Kernel Overflow User) with UID 65534 and GID 65534.
>>> Creating user 'operator' (operator) with UID 11 and GID 0.
>>> Creating user 'root' (Super User) with UID 0 and GID 0.
>>> Creating user 'shutdown' (shutdown) with UID 6 and GID 0.
>>> Creating user 'sync' (sync) with UID 5 and GID 0.
>>> 
[ 11/188] Installing setup-0:2.15.0-28. 100% |  51.0 MiB/s | 730.6 KiB |  00m00s
>>> [RPM] /etc/hosts created as /etc/hosts.rpmnew
[ 12/188] Installing filesystem-0:3.18- 100% |   3.0 MiB/s | 212.8 KiB |  00m00s
[ 13/188] Installing rust-srpm-macros-0 100% |   0.0   B/s |   6.4 KiB |  00m00s
[ 14/188] Installing qt6-srpm-macros-0: 100% |   0.0   B/s | 748.0   B |  00m00s
[ 15/188] Installing package-notes-srpm 100% |   0.0   B/s |   2.1 KiB |  00m00s
[ 16/188] Installing pkgconf-m4-0:2.5.1 100% |   0.0   B/s |  14.7 KiB |  00m00s
[ 17/188] Installing gnulib-l10n-0:2024 100% | 215.5 MiB/s | 661.9 KiB |  00m00s
[ 18/188] Installing coreutils-common-0 100% | 381.7 MiB/s |  10.7 MiB |  00m00s
[ 19/188] Installing pcre2-syntax-0:10. 100% | 277.7 MiB/s | 284.3 KiB |  00m00s
[ 20/188] Installing ncurses-base-0:6.6 100% |  86.7 MiB/s | 355.3 KiB |  00m00s
[ 21/188] Installing bash-0:5.3.9-3.fc4 100% | 273.6 MiB/s |   8.5 MiB |  00m00s
[ 22/188] Installing glibc-common-0:2.4 100% |  64.0 MiB/s |   1.0 MiB |  00m00s
[ 23/188] Installing glibc-gconv-extra- 100% | 300.0 MiB/s |   7.5 MiB |  00m00s
[ 24/188] Installing glibc-0:2.43-8.fc4 100% | 182.6 MiB/s |   6.9 MiB |  00m00s
[ 25/188] Installing ncurses-libs-0:6.6 100% | 238.1 MiB/s | 975.4 KiB |  00m00s
[ 26/188] Installing glibc-minimal-lang 100% |   0.0   B/s | 124.0   B |  00m00s
[ 27/188] Installing zlib-ng-compat-0:2 100% | 162.6 MiB/s | 166.5 KiB |  00m00s
[ 28/188] Installing bzip2-libs-0:1.0.8 100% |  79.7 MiB/s |  81.6 KiB |  00m00s
[ 29/188] Installing libgpg-error-0:1.5 100% |  61.7 MiB/s | 947.5 KiB |  00m00s
[ 30/188] Installing libstdc++-0:16.2.1 100% | 386.2 MiB/s |   3.1 MiB |  00m00s
[ 31/188] Installing libassuan-0:2.5.7- 100% | 161.8 MiB/s | 165.7 KiB |  00m00s
[ 32/188] Installing libgcrypt-0:1.12.2 100% | 331.7 MiB/s |   1.7 MiB |  00m00s
[ 33/188] Installing readline-0:8.3-4.f 100% | 254.7 MiB/s | 521.6 KiB |  00m00s
[ 34/188] Installing xz-libs-1:5.8.2-2. 100% | 213.7 MiB/s | 218.8 KiB |  00m00s
[ 35/188] Installing gmp-1:6.3.0-5.fc44 100% | 399.2 MiB/s | 817.5 KiB |  00m00s
[ 36/188] Installing libzstd-0:1.5.7-5. 100% | 467.5 MiB/s | 957.4 KiB |  00m00s
[ 37/188] Installing elfutils-libelf-0: 100% | 481.0 MiB/s |   1.4 MiB |  00m00s
[ 38/188] Installing libuuid-0:2.41.5-1 100% |   0.0   B/s |  38.3 KiB |  00m00s
[ 39/188] Installing libacl-0:2.4.0-1.f 100% |   0.0   B/s |  40.7 KiB |  00m00s
[ 40/188] Installing popt-0:1.19-10.fc4 100% |  68.0 MiB/s | 139.3 KiB |  00m00s
[ 41/188] Installing systemd-libs-0:259 100% | 350.1 MiB/s |   2.5 MiB |  00m00s
[ 42/188] Installing npth-0:1.8-4.fc44. 100% |   0.0   B/s |  50.6 KiB |  00m00s
[ 43/188] Installing libblkid-0:2.41.5- 100% | 268.8 MiB/s | 275.3 KiB |  00m00s
[ 44/188] Installing libxcrypt-0:4.5.2- 100% | 289.0 MiB/s | 295.9 KiB |  00m00s
[ 45/188] Installing libsepol-0:3.11-1. 100% | 421.4 MiB/s | 863.0 KiB |  00m00s
[ 46/188] Installing sqlite-libs-0:3.51 100% | 397.6 MiB/s |   1.6 MiB |  00m00s
[ 47/188] Installing gnupg2-gpgconf-0:2 100% |  18.9 MiB/s | 251.8 KiB |  00m00s
[ 48/188] Installing pcre2-0:10.47-1.fc 100% | 351.6 MiB/s | 720.0 KiB |  00m00s
[ 49/188] Installing libselinux-0:3.11- 100% | 201.6 MiB/s | 206.5 KiB |  00m00s
[ 50/188] Installing grep-0:3.12-3.fc44 100% |  66.8 MiB/s |   1.0 MiB |  00m00s
[ 51/188] Installing sed-0:4.9-7.fc44.x 100% |  56.3 MiB/s | 865.4 KiB |  00m00s
[ 52/188] Installing findutils-1:4.10.0 100% | 110.0 MiB/s |   1.9 MiB |  00m00s
[ 53/188] Installing json-c-0:0.18-8.fc 100% |  81.9 MiB/s |  83.9 KiB |  00m00s
[ 54/188] Installing libtasn1-0:4.21.0- 100% | 178.2 MiB/s | 182.4 KiB |  00m00s
[ 55/188] Installing libunistring-0:1.1 100% | 346.9 MiB/s |   1.7 MiB |  00m00s
[ 56/188] Installing libidn2-0:2.3.8-3. 100% |  61.0 MiB/s | 562.6 KiB |  00m00s
[ 57/188] Installing crypto-policies-0: 100% |  38.5 MiB/s | 157.7 KiB |  00m00s
[ 58/188] Installing xz-1:5.8.2-2.fc44. 100% |  76.1 MiB/s |   1.4 MiB |  00m00s
[ 59/188] Installing libmount-0:2.41.5- 100% | 192.3 MiB/s | 393.7 KiB |  00m00s
[ 60/188] Installing gnupg2-verify-0:2. 100% |  27.2 MiB/s | 361.7 KiB |  00m00s
[ 61/188] Installing dwz-0:0.16-3.fc44. 100% |  23.8 MiB/s | 292.3 KiB |  00m00s
[ 62/188] Installing mpfr-0:4.2.2-3.fc4 100% | 276.9 MiB/s | 850.8 KiB |  00m00s
[ 63/188] Installing gawk-0:5.3.2-3.fc4 100% | 107.9 MiB/s |   1.8 MiB |  00m00s
[ 64/188] Installing libksba-0:1.6.7-5. 100% | 203.6 MiB/s | 416.9 KiB |  00m00s
[ 65/188] Installing unzip-0:6.0-69.fc4 100% |  33.8 MiB/s | 449.3 KiB |  00m00s
[ 66/188] Installing file-libs-0:5.46-1 100% | 659.2 MiB/s |  11.9 MiB |  00m00s
[ 67/188] Installing file-0:5.46-10.fc4 100% |   8.3 MiB/s | 101.6 KiB |  00m00s
[ 68/188] Installing diffutils-0:3.12-5 100% |  98.3 MiB/s |   1.6 MiB |  00m00s
[ 69/188] Installing libeconf-0:0.7.9-3 100% |  64.9 MiB/s |  66.4 KiB |  00m00s
[ 70/188] Installing lua-libs-0:5.4.8-5 100% | 276.6 MiB/s | 283.2 KiB |  00m00s
[ 71/188] Installing libattr-0:2.6.0-1. 100% |   0.0   B/s |  25.2 KiB |  00m00s
[ 72/188] Installing libsmartcols-0:2.4 100% | 185.0 MiB/s | 189.5 KiB |  00m00s
[ 73/188] Installing libcap-ng-0:0.9.6- 100% |  69.0 MiB/s |  70.6 KiB |  00m00s
[ 74/188] Installing audit-libs-0:4.2.1 100% | 383.9 MiB/s | 393.1 KiB |  00m00s
[ 75/188] Installing pam-libs-0:1.7.2-2 100% | 129.6 MiB/s | 132.7 KiB |  00m00s
[ 76/188] Installing libcap-0:2.78-1.fc 100% |  16.3 MiB/s | 217.2 KiB |  00m00s
[ 77/188] Installing libsemanage-0:3.11 100% | 310.7 MiB/s | 318.2 KiB |  00m00s
[ 78/188] Installing alternatives-0:1.3 100% |   5.2 MiB/s |  63.6 KiB |  00m00s
[ 79/188] Installing libffi-0:3.5.2-2.f 100% |  87.0 MiB/s |  89.1 KiB |  00m00s
[ 80/188] Installing p11-kit-0:0.26.5-1 100% | 125.3 MiB/s |   2.6 MiB |  00m00s
[ 81/188] Installing p11-kit-trust-0:0. 100% |  22.3 MiB/s | 480.1 KiB |  00m00s
[ 82/188] Installing ngtcp2-0:1.22.1-1. 100% | 165.9 MiB/s | 339.8 KiB |  00m00s
[ 83/188] Installing openssl-libs-1:3.5 100% | 367.5 MiB/s |   9.2 MiB |  00m00s
[ 84/188] Installing coreutils-0:9.10-5 100% | 167.6 MiB/s |   5.7 MiB |  00m00s
[ 85/188] Installing ca-certificates-0: 100% |   2.2 MiB/s |   2.5 MiB |  00m01s
[ 86/188] Installing gzip-0:1.14-2.fc44 100% |  28.4 MiB/s | 407.1 KiB |  00m00s
[ 87/188] Installing libfsverity-0:1.6- 100% |  28.7 MiB/s |  29.4 KiB |  00m00s
[ 88/188] Installing rpm-sequoia-0:1.10 100% | 350.2 MiB/s |   2.5 MiB |  00m00s
[ 89/188] Installing libevent-0:2.1.13- 100% | 320.5 MiB/s | 984.4 KiB |  00m00s
[ 90/188] Installing ngtcp2-crypto-ossl 100% |   0.0   B/s |  52.5 KiB |  00m00s
[ 91/188] Installing liblastlog2-0:2.41 100% |   6.1 MiB/s |  43.7 KiB |  00m00s
[ 92/188] Installing util-linux-core-0: 100% |  77.8 MiB/s |   1.5 MiB |  00m00s
[ 93/188] Installing zip-0:3.0-45.fc44. 100% |  49.0 MiB/s | 701.9 KiB |  00m00s
[ 94/188] Installing gnupg2-keyboxd-0:2 100% |  28.2 MiB/s | 202.4 KiB |  00m00s
[ 95/188] Installing libpsl-0:0.21.5-7. 100% |  75.6 MiB/s |  77.4 KiB |  00m00s
[ 96/188] Installing tar-2:1.35-9.fc44. 100% | 148.9 MiB/s |   3.0 MiB |  00m00s
[ 97/188] Installing linkdupes-0:0.7.3- 100% |  54.6 MiB/s | 782.3 KiB |  00m00s
[ 98/188] Installing libselinux-utils-0 100% |  22.3 MiB/s | 320.2 KiB |  00m00s
[ 99/188] Installing systemd-standalone 100% |  23.0 MiB/s | 306.4 KiB |  00m00s
[100/188] Installing rpm-libs-0:6.0.2-1 100% | 313.4 MiB/s | 962.8 KiB |  00m00s
[101/188] Installing libfdisk-0:2.41.5- 100% | 190.1 MiB/s | 389.4 KiB |  00m00s
[102/188] Installing util-linux-0:2.41. 100% |  99.5 MiB/s |   3.6 MiB |  00m00s
[103/188] Installing policycoreutils-0: 100% |  34.3 MiB/s | 913.0 KiB |  00m00s
[104/188] Installing selinux-policy-0:4 100% |   1.6 MiB/s |  34.5 KiB |  00m00s
[105/188] Installing selinux-policy-tar 100% | 207.0 MiB/s |  14.9 MiB |  00m00s
[106/188] Installing libusb1-0:1.0.30-1 100% |  21.7 MiB/s | 177.7 KiB |  00m00s
>>> Running sysusers scriptlet: tpm2-tss-0:4.1.3-9.fc44.x86_64
>>> Finished sysusers scriptlet: tpm2-tss-0:4.1.3-9.fc44.x86_64
>>> Scriptlet output:
>>> Creating group 'tss' with GID 59.
>>> Creating user 'tss' (Account used for TPM access) with UID 59 and GID 59.
>>> 
[107/188] Installing tpm2-tss-0:4.1.3-9 100% | 272.2 MiB/s |   1.6 MiB |  00m00s
[108/188] Installing ima-evm-utils-libs 100% |  60.4 MiB/s |  61.9 KiB |  00m00s
[109/188] Installing gnupg2-gpg-agent-0 100% |  30.6 MiB/s | 690.5 KiB |  00m00s
[110/188] Installing zstd-0:1.5.7-5.fc4 100% |  35.3 MiB/s | 506.0 KiB |  00m00s
[111/188] Installing nettle-0:3.10.1-3. 100% | 259.6 MiB/s | 797.4 KiB |  00m00s
[112/188] Installing gnutls-0:3.8.13-1. 100% | 384.9 MiB/s |   3.8 MiB |  00m00s
[113/188] Installing libxml2-0:2.12.10- 100% | 104.2 MiB/s |   1.8 MiB |  00m00s
[114/188] Installing bzip2-0:1.0.8-23.f 100% |   7.5 MiB/s |  99.5 KiB |  00m00s
[115/188] Installing add-determinism-0: 100% | 121.2 MiB/s |   2.2 MiB |  00m00s
[116/188] Installing build-reproducibil 100% |   1.5 MiB/s |   1.5 KiB |  00m00s
[117/188] Installing cpio-0:2.15-9.fc44 100% |  69.0 MiB/s |   1.1 MiB |  00m00s
[118/188] Installing ed-0:1.22.5-2.fc44 100% |  11.4 MiB/s | 152.0 KiB |  00m00s
[119/188] Installing patch-0:2.8-4.fc44 100% |  17.1 MiB/s | 228.1 KiB |  00m00s
[120/188] Installing libgomp-0:16.2.1-2 100% | 282.6 MiB/s | 578.9 KiB |  00m00s
[121/188] Installing jansson-0:2.14-4.f 100% |  88.2 MiB/s |  90.3 KiB |  00m00s
[122/188] Installing lz4-libs-0:1.10.0- 100% | 154.6 MiB/s | 158.4 KiB |  00m00s
[123/188] Installing libarchive-0:3.8.7 100% | 326.0 MiB/s |   1.0 MiB |  00m00s
[124/188] Installing libpkgconf-0:2.5.1 100% |  89.1 MiB/s |  91.3 KiB |  00m00s
[125/188] Installing pkgconf-0:2.5.1-1. 100% |   7.7 MiB/s |  95.2 KiB |  00m00s
[126/188] Installing pkgconf-pkg-config 100% | 147.8 KiB/s |   1.8 KiB |  00m00s
[127/188] Installing libtool-ltdl-0:2.5 100% |  69.5 MiB/s |  71.1 KiB |  00m00s
[128/188] Installing gdbm-libs-1:1.23-1 100% | 128.3 MiB/s | 131.3 KiB |  00m00s
[129/188] Installing cyrus-sasl-lib-0:2 100% | 135.9 MiB/s |   2.3 MiB |  00m00s
[130/188] Installing openldap-0:2.6.14- 100% | 219.6 MiB/s | 674.7 KiB |  00m00s
[131/188] Installing gnupg2-dirmngr-0:2 100% |  29.6 MiB/s | 636.7 KiB |  00m00s
[132/188] Installing gnupg2-0:2.4.9-16. 100% | 224.3 MiB/s |   6.5 MiB |  00m00s
[133/188] Installing rpm-sign-libs-0:6. 100% |  39.5 MiB/s |  40.5 KiB |  00m00s
[134/188] Installing gpgverify-0:2.2-4. 100% |   0.0   B/s |   9.4 KiB |  00m00s
[135/188] Installing libpfm-0:4.13.0-20 100% | 576.1 MiB/s |   1.7 MiB |  00m00s
[136/188] Installing xxhash-libs-0:0.8. 100% |  93.2 MiB/s |  95.4 KiB |  00m00s
[137/188] Installing libnghttp3-0:1.18. 100% | 161.0 MiB/s | 164.8 KiB |  00m00s
[138/188] Installing libbrotli-0:1.2.0- 100% | 282.3 MiB/s | 867.3 KiB |  00m00s
[139/188] Installing libcbor-0:0.13.0-2 100% |  79.0 MiB/s |  80.9 KiB |  00m00s
[140/188] Installing libfido2-0:1.16.0- 100% | 242.1 MiB/s | 247.9 KiB |  00m00s
[141/188] Installing keyutils-libs-0:1. 100% |   0.0   B/s |  55.6 KiB |  00m00s
[142/188] Installing libcom_err-0:1.47. 100% |   0.0   B/s |  64.1 KiB |  00m00s
[143/188] Installing libverto-0:0.3.2-1 100% |  26.4 MiB/s |  27.1 KiB |  00m00s
[144/188] Installing krb5-libs-0:1.22.2 100% | 342.1 MiB/s |   2.4 MiB |  00m00s
[145/188] Installing libssh-0:0.12.2-1. 100% | 236.9 MiB/s | 727.6 KiB |  00m00s
[146/188] Installing libnghttp2-0:1.68. 100% | 163.3 MiB/s | 167.3 KiB |  00m00s
[147/188] Installing libcurl-0:8.18.0-1 100% | 332.7 MiB/s |   1.0 MiB |  00m00s
[148/188] Installing curl-0:8.18.0-10.f 100% |  21.4 MiB/s | 482.7 KiB |  00m00s
[149/188] Installing rpm-0:6.0.2-1.fc44 100% |  77.3 MiB/s |   2.6 MiB |  00m00s
[150/188] Installing cmake-srpm-macros- 100% |   0.0   B/s | 804.0   B |  00m00s
[151/188] Installing efi-srpm-macros-0: 100% |   0.0   B/s |  41.2 KiB |  00m00s
[152/188] Installing java-srpm-macros-0 100% |   0.0   B/s |   1.1 KiB |  00m00s
[153/188] Installing lua-srpm-macros-0: 100% |   0.0   B/s |   1.9 KiB |  00m00s
[154/188] Installing tree-sitter-srpm-m 100% |   0.0   B/s |   9.3 KiB |  00m00s
[155/188] Installing zig-srpm-macros-0: 100% |   0.0   B/s |   1.9 KiB |  00m00s
[156/188] Installing filesystem-srpm-ma 100% |   0.0   B/s |  38.9 KiB |  00m00s
[157/188] Installing elfutils-default-y 100% | 408.6 KiB/s |   2.0 KiB |  00m00s
[158/188] Installing elfutils-libs-0:0. 100% | 233.5 MiB/s | 717.2 KiB |  00m00s
[159/188] Installing elfutils-debuginfo 100% |   6.0 MiB/s |  86.2 KiB |  00m00s
[160/188] Installing elfutils-0:0.196-1 100% | 150.7 MiB/s |   3.2 MiB |  00m00s
[161/188] Installing binutils-0:2.46.1- 100% | 328.6 MiB/s |  28.3 MiB |  00m00s
[162/188] Installing gdb-minimal-0:17.2 100% | 283.2 MiB/s |  14.2 MiB |  00m00s
[163/188] Installing debugedit-0:5.3-2. 100% |  16.8 MiB/s | 224.0 KiB |  00m00s
[164/188] Installing rpm-build-libs-0:6 100% | 270.7 MiB/s | 277.2 KiB |  00m00s
[165/188] Installing qt5-srpm-macros-0: 100% |   0.0   B/s | 776.0   B |  00m00s
[166/188] Installing perl-srpm-macros-0 100% |   0.0   B/s |   1.1 KiB |  00m00s
[167/188] Installing openblas-srpm-macr 100% |   0.0   B/s | 392.0   B |  00m00s
[168/188] Installing ocaml-srpm-macros- 100% |   0.0   B/s |   2.1 KiB |  00m00s
[169/188] Installing kernel-srpm-macros 100% |   0.0   B/s |   2.3 KiB |  00m00s
[170/188] Installing gnat-srpm-macros-0 100% |   0.0   B/s |   1.3 KiB |  00m00s
[171/188] Installing ghc-srpm-macros-0: 100% |   0.0   B/s |   1.0 KiB |  00m00s
[172/188] Installing gap-srpm-macros-0: 100% |   0.0   B/s |   2.7 KiB |  00m00s
[173/188] Installing fpc-srpm-macros-0: 100% |   0.0   B/s | 420.0   B |  00m00s
[174/188] Installing ansible-srpm-macro 100% |   0.0   B/s |  36.2 KiB |  00m00s
[175/188] Installing gnome-srpm-macros- 100% |   0.0   B/s |   4.1 KiB |  00m00s
[176/188] Installing redhat-rpm-config- 100% |  30.9 MiB/s | 189.9 KiB |  00m00s
[177/188] Installing forge-srpm-macros- 100% |  39.3 MiB/s |  40.3 KiB |  00m00s
[178/188] Installing rpm-build-0:6.0.2- 100% |  21.2 MiB/s | 303.5 KiB |  00m00s
[179/188] Installing erlang-srpm-macros 100% |   0.0   B/s |   2.5 KiB |  00m00s
[180/188] Installing pyproject-srpm-mac 100% |   0.0   B/s |   4.0 KiB |  00m00s
[181/188] Installing fonts-srpm-macros- 100% |   0.0   B/s |  57.0 KiB |  00m00s
[182/188] Installing go-srpm-macros-0:3 100% |   0.0   B/s |  63.0 KiB |  00m00s
[183/188] Installing python-srpm-macros 100% |   0.0   B/s |  52.9 KiB |  00m00s
[184/188] Installing R-srpm-macros-0:1. 100% |   0.0   B/s |   4.4 KiB |  00m00s
[185/188] Installing rpm-plugin-selinux 100% |   0.0   B/s |  12.9 KiB |  00m00s
[186/188] Installing which-0:2.25-1.fc4 100% |   6.4 MiB/s |  85.8 KiB |  00m00s
[187/188] Installing shadow-utils-2:4.1 100% | 138.9 MiB/s |   4.0 MiB |  00m00s
[188/188] Installing info-0:7.2-9.fc44. 100% |  52.1 KiB/s | 366.0 KiB |  00m07s
Complete!
Finish: installing minimal buildroot with dnf5
Start: creating root cache
Finish: creating root cache
Finish: chroot init
INFO: Installed packages:
INFO: R-srpm-macros-1.3.7-2.fc44.noarch
add-determinism-0.7.3-2.fc44.x86_64
alternatives-1.33-5.fc44.x86_64
ansible-srpm-macros-1-20.1.fc44.noarch
audit-libs-4.2.1-1.fc44.x86_64
bash-5.3.9-3.fc44.x86_64
binutils-2.46.1-1.fc44.x86_64
build-reproducibility-srpm-macros-0.7.3-2.fc44.noarch
bzip2-1.0.8-23.fc44.x86_64
bzip2-libs-1.0.8-23.fc44.x86_64
ca-certificates-2026.2.90_v9.0.317-1.fc44.noarch
cmake-srpm-macros-4.3.0-1.fc44.noarch
coreutils-9.10-5.fc44.x86_64
coreutils-common-9.10-5.fc44.x86_64
cpio-2.15-9.fc44.x86_64
crypto-policies-20251128-3.git19878fe.fc44.noarch
curl-8.18.0-10.fc44.x86_64
cyrus-sasl-lib-2.1.28-35.fc44.x86_64
debugedit-5.3-2.fc44.x86_64
diffutils-3.12-5.fc44.x86_64
dwz-0.16-3.fc44.x86_64
ed-1.22.5-2.fc44.x86_64
efi-srpm-macros-6-6.fc44.noarch
elfutils-0.196-1.fc44.x86_64
elfutils-debuginfod-client-0.196-1.fc44.x86_64
elfutils-default-yama-scope-0.196-1.fc44.noarch
elfutils-libelf-0.196-1.fc44.x86_64
elfutils-libs-0.196-1.fc44.x86_64
erlang-srpm-macros-0.3.11-1.fc44.noarch
fedora-gpg-keys-44-2.noarch
fedora-release-44-18.noarch
fedora-release-common-44-18.noarch
fedora-release-identity-basic-44-18.noarch
fedora-repos-44-2.noarch
file-5.46-10.fc44.x86_64
file-libs-5.46-10.fc44.x86_64
filesystem-3.18-52.fc44.x86_64
filesystem-srpm-macros-3.18-52.fc44.noarch
findutils-4.10.0-7.fc44.x86_64
fonts-srpm-macros-5.0.0-2.fc44.noarch
forge-srpm-macros-0.4.0-4.fc44.noarch
fpc-srpm-macros-1.3-16.fc44.noarch
gap-srpm-macros-2-2.fc44.noarch
gawk-5.3.2-3.fc44.x86_64
gdb-minimal-17.2-2.fc44.x86_64
gdbm-libs-1.23-11.fc44.x86_64
ghc-srpm-macros-1.10-1.fc44.noarch
glibc-2.43-8.fc44.x86_64
glibc-common-2.43-8.fc44.x86_64
glibc-gconv-extra-2.43-8.fc44.x86_64
glibc-minimal-langpack-2.43-8.fc44.x86_64
gmp-6.3.0-5.fc44.x86_64
gnat-srpm-macros-7-2.fc44.noarch
gnome-srpm-macros-1.0-1.fc44.noarch
gnulib-l10n-20241231-2.fc44.noarch
gnupg2-2.4.9-16.fc44.x86_64
gnupg2-dirmngr-2.4.9-16.fc44.x86_64
gnupg2-gpg-agent-2.4.9-16.fc44.x86_64
gnupg2-gpgconf-2.4.9-16.fc44.x86_64
gnupg2-keyboxd-2.4.9-16.fc44.x86_64
gnupg2-verify-2.4.9-16.fc44.x86_64
gnutls-3.8.13-1.fc44.x86_64
go-srpm-macros-3.8.0-2.fc44.noarch
gpg-pubkey-36f612dcf27f7d1a48a835e4dbfcf71c6d9f90a6-6786af3b
gpgverify-2.2-4.fc44.noarch
grep-3.12-3.fc44.x86_64
gzip-1.14-2.fc44.x86_64
ima-evm-utils-libs-1.6.2-8.fc44.x86_64
info-7.2-9.fc44.x86_64
jansson-2.14-4.fc44.x86_64
java-srpm-macros-1-8.fc44.noarch
json-c-0.18-8.fc44.x86_64
kernel-srpm-macros-1.0-28.fc44.noarch
keyutils-libs-1.6.3-7.fc44.x86_64
krb5-libs-1.22.2-4.fc44.x86_64
libacl-2.4.0-1.fc44.x86_64
libarchive-3.8.7-1.fc44.x86_64
libassuan-2.5.7-5.fc44.x86_64
libattr-2.6.0-1.fc44.x86_64
libblkid-2.41.5-1.fc44.x86_64
libbrotli-1.2.0-3.fc44.x86_64
libcap-2.78-1.fc44.x86_64
libcap-ng-0.9.6-1.fc44.x86_64
libcbor-0.13.0-2.fc44.x86_64
libcom_err-1.47.3-4.fc44.x86_64
libcurl-8.18.0-10.fc44.x86_64
libeconf-0.7.9-3.fc44.x86_64
libevent-2.1.13-1.fc44.x86_64
libfdisk-2.41.5-1.fc44.x86_64
libffi-3.5.2-2.fc44.x86_64
libfido2-1.16.0-5.fc44.x86_64
libfsverity-1.6-4.fc44.x86_64
libgcc-16.2.1-2.fc44.x86_64
libgcrypt-1.12.2-1.fc44.x86_64
libgomp-16.2.1-2.fc44.x86_64
libgpg-error-1.58-2.fc44.x86_64
libidn2-2.3.8-3.fc44.x86_64
libksba-1.6.7-5.fc44.x86_64
liblastlog2-2.41.5-1.fc44.x86_64
libmount-2.41.5-1.fc44.x86_64
libnghttp2-1.68.0-5.fc44.x86_64
libnghttp3-1.18.0-1.fc44.x86_64
libpfm-4.13.0-20.fc44.x86_64
libpkgconf-2.5.1-1.fc44.x86_64
libpsl-0.21.5-7.fc44.x86_64
libselinux-3.11-2.fc44.x86_64
libselinux-utils-3.11-2.fc44.x86_64
libsemanage-3.11-1.fc44.x86_64
libsepol-3.11-1.fc44.x86_64
libsmartcols-2.41.5-1.fc44.x86_64
libssh-0.12.2-1.fc44.x86_64
libssh-config-0.12.2-1.fc44.noarch
libstdc++-16.2.1-2.fc44.x86_64
libtasn1-4.21.0-1.fc44.x86_64
libtool-ltdl-2.5.4-10.fc44.x86_64
libunistring-1.1-11.fc44.x86_64
libusb1-1.0.30-1.fc44.x86_64
libuuid-2.41.5-1.fc44.x86_64
libverto-0.3.2-12.fc44.x86_64
libxcrypt-4.5.2-3.fc44.x86_64
libxml2-2.12.10-6.fc44.x86_64
libzstd-1.5.7-5.fc44.x86_64
linkdupes-0.7.3-2.fc44.x86_64
lua-libs-5.4.8-5.fc44.x86_64
lua-srpm-macros-1-17.fc44.noarch
lz4-libs-1.10.0-4.fc44.x86_64
mpfr-4.2.2-3.fc44.x86_64
ncurses-base-6.6-1.fc44.noarch
ncurses-libs-6.6-1.fc44.x86_64
nettle-3.10.1-3.fc44.x86_64
ngtcp2-1.22.1-1.fc44.x86_64
ngtcp2-crypto-ossl-1.22.1-1.fc44.x86_64
npth-1.8-4.fc44.x86_64
ocaml-srpm-macros-11-3.fc44.noarch
openblas-srpm-macros-2-21.fc44.noarch
openldap-2.6.14-1.fc44.x86_64
openssl-libs-3.5.8-1.fc44.x86_64
p11-kit-0.26.5-1.fc44.x86_64
p11-kit-trust-0.26.5-1.fc44.x86_64
package-notes-srpm-macros-0.20-1.fc44.noarch
pam-libs-1.7.2-2.fc44.x86_64
patch-2.8-4.fc44.x86_64
pcre2-10.47-1.fc44.1.x86_64
pcre2-syntax-10.47-1.fc44.1.noarch
perl-srpm-macros-1-61.fc44.noarch
pkgconf-2.5.1-1.fc44.x86_64
pkgconf-m4-2.5.1-1.fc44.noarch
pkgconf-pkg-config-2.5.1-1.fc44.x86_64
policycoreutils-3.11-2.fc44.x86_64
popt-1.19-10.fc44.x86_64
publicsuffix-list-dafsa-20260116-1.fc44.noarch
pyproject-srpm-macros-1.23.2-1.fc44.noarch
python-srpm-macros-3.14-12.fc44.noarch
qt5-srpm-macros-5.15.18-2.fc44.noarch
qt6-srpm-macros-6.11.2-1.fc44.noarch
readline-8.3-4.fc44.x86_64
redhat-rpm-config-344-2.fc44.noarch
rpm-6.0.2-1.fc44.x86_64
rpm-build-6.0.2-1.fc44.x86_64
rpm-build-libs-6.0.2-1.fc44.x86_64
rpm-libs-6.0.2-1.fc44.x86_64
rpm-plugin-selinux-6.0.2-1.fc44.x86_64
rpm-sequoia-1.10.3-1.fc44.x86_64
rpm-sign-libs-6.0.2-1.fc44.x86_64
rust-srpm-macros-28.5-1.fc44.noarch
sed-4.9-7.fc44.x86_64
selinux-policy-44.10-1.fc44.noarch
selinux-policy-targeted-44.10-1.fc44.noarch
setup-2.15.0-28.fc44.noarch
shadow-utils-4.19.0-7.fc44.x86_64
sqlite-libs-3.51.2-2.fc44.x86_64
systemd-libs-259.9-1.fc44.x86_64
systemd-standalone-sysusers-259.9-1.fc44.x86_64
tar-1.35-9.fc44.x86_64
tpm2-tss-4.1.3-9.fc44.x86_64
tree-sitter-srpm-macros-0.4.2-2.fc44.noarch
unzip-6.0-69.fc44.x86_64
util-linux-2.41.5-1.fc44.x86_64
util-linux-core-2.41.5-1.fc44.x86_64
which-2.25-1.fc44.x86_64
xxhash-libs-0.8.3-4.fc44.x86_64
xz-5.8.2-2.fc44.x86_64
xz-libs-5.8.2-2.fc44.x86_64
zig-srpm-macros-1-8.fc44.noarch
zip-3.0-45.fc44.x86_64
zlib-ng-compat-2.3.3-3.fc44.x86_64
zstd-1.5.7-5.fc44.x86_64
Start: buildsrpm
Start: rpmbuild -bs
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1790208000
Wrote: /builddir/build/SRPMS/conglomerate-1.6.80-1.20120308git166303d.fc44.src.rpm
Finish: rpmbuild -bs
INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-44-x86_64-1790274036.249598/root/var/log/dnf5.log
INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz
/bin/tar: Removing leading `/' from member names
Finish: buildsrpm
INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-hywy6c6x/conglomerate/conglomerate.spec) Config(child) 0 minutes 28 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
INFO: Start(/var/lib/copr-rpmbuild/results/conglomerate-1.6.80-1.20120308git166303d.fc44.src.rpm)  Config(fedora-44-x86_64)
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-44-x86_64-bootstrap-1790274036.249598/root.
INFO: reusing tmpfs at /var/lib/mock/fedora-44-x86_64-bootstrap-1790274036.249598/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-44-x86_64-1790274036.249598/root.
INFO: calling preinit hooks
INFO: enabled root cache
Start: unpacking root cache
Finish: unpacking root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Buildroot is handled by package management downloaded with a bootstrap image:
  rpm-6.0.2-1.fc44.x86_64
  rpm-sequoia-1.10.3-1.fc44.x86_64
  dnf5-5.4.5.0-1.fc44.x86_64
  dnf5-plugins-5.4.5.0-1.fc44.x86_64
Finish: chroot init
Start: build phase for conglomerate-1.6.80-1.20120308git166303d.fc44.src.rpm
Start: build setup for conglomerate-1.6.80-1.20120308git166303d.fc44.src.rpm
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1790208000
Wrote: /builddir/build/SRPMS/conglomerate-1.6.80-1.20120308git166303d.fc44.src.rpm
Updating and loading repositories:
 updates                                100% | 128.6 KiB/s |  22.6 KiB |  00m00s
 fedora                                 100% | 136.9 KiB/s |  24.1 KiB |  00m00s
 Copr repository                        100% |  85.1 KiB/s |   1.5 KiB |  00m00s
Repositories loaded.
Package                               Arch   Version                           Repository      Size
Installing:
 autoconf                             noarch 0:2.72-10.fc44                    fedora       2.8 MiB
 automake                             noarch 0:1.18.1-4.fc44                   fedora       1.8 MiB
 bicpl-devel                          x86_64 0:2.0.0-1.20260106git8be98a9.fc44 copr_base  196.8 KiB
 gcc                                  x86_64 0:16.2.1-2.fc44                   updates    121.8 MiB
 gcc-c++                              x86_64 0:16.2.1-2.fc44                   updates     46.8 MiB
 libminc-devel                        x86_64 0:2.4.03-31.fc44                  updates    359.1 KiB
 libtool                              x86_64 0:2.5.4-10.fc44                   fedora       2.7 MiB
 make                                 x86_64 1:4.4.1-12.fc44                   fedora       1.8 MiB
 netcdf-devel                         x86_64 0:4.9.3-2.fc44                    fedora     397.7 KiB
 perl-Getopt-Tabular                  noarch 0:0.3-33.fc44                     fedora      86.8 KiB
 perl-MNI                             noarch 0:0.08-1.20110321git075ae53.fc44  copr_base  439.5 KiB
 perl-interpreter                     x86_64 4:5.42.3-525.fc44                 updates    118.8 KiB
 zlib-ng-compat-devel                 x86_64 0:2.3.3-3.fc44                    fedora     107.0 KiB
Installing dependencies:
 ImageMagick                          x86_64 1:7.1.2.31-1.fc44                 updates     88.0 KiB
 ImageMagick-libs                     x86_64 1:7.1.2.31-1.fc44                 updates      9.1 MiB
 LibRaw                               x86_64 0:0.22.2-1.fc44                   updates      2.6 MiB
 abattis-cantarell-vf-fonts           noarch 0:0.301-17.fc44                   fedora     192.7 KiB
 adobe-mappings-cmap                  noarch 0:20231115-5.fc44                 fedora      15.2 MiB
 adobe-mappings-cmap-deprecated       noarch 0:20231115-5.fc44                 fedora     582.1 KiB
 adobe-mappings-pdf                   noarch 0:20190401-12.fc44                fedora       4.4 MiB
 annobin-docs                         noarch 0:13.14-1.fc44                    updates     99.3 KiB
 annobin-plugin-gcc                   x86_64 0:13.14-1.fc44                    updates    699.3 KiB
 avahi-libs                           x86_64 0:0.9~rc2-8.fc44                  fedora     179.2 KiB
 bicpl                                x86_64 0:2.0.0-1.20260106git8be98a9.fc44 copr_base    1.3 MiB
 blosc                                x86_64 0:1.21.6-10.fc44                  fedora     126.1 KiB
 brotli                               x86_64 0:1.2.0-3.fc44                    fedora      33.4 KiB
 brotli-devel                         x86_64 0:1.2.0-3.fc44                    fedora      65.9 KiB
 bubblewrap                           x86_64 0:0.12.0-1.fc44                   updates    139.8 KiB
 cairo                                x86_64 0:1.18.4-6.fc44                   fedora       1.8 MiB
 cairo-gobject                        x86_64 0:1.18.4-6.fc44                   fedora      31.0 KiB
 cmake                                x86_64 0:4.3.0-1.fc44                    fedora      40.5 MiB
 cmake-data                           noarch 0:4.3.0-1.fc44                    fedora       9.4 MiB
 cmake-filesystem                     x86_64 0:4.3.0-1.fc44                    fedora       0.0   B
 cmake-rpm-macros                     noarch 0:4.3.0-1.fc44                    fedora       8.4 KiB
 cpp                                  x86_64 0:16.2.1-2.fc44                   updates     42.6 MiB
 cups-filesystem                      noarch 1:2.4.19-3.fc44                   updates      0.0   B
 cups-libs                            x86_64 1:2.4.19-3.fc44                   updates    634.6 KiB
 dbus-libs                            x86_64 1:1.16.2-1.fc44                   fedora     357.4 KiB
 default-fonts-core-sans              noarch 0:4.3-1.fc44                      fedora      11.9 KiB
 emacs-filesystem                     x86_64 1:30.2-2.fc44                     fedora       0.0   B
 expat                                x86_64 0:2.8.3-1.fc44                    updates    334.4 KiB
 fftw-libs-double                     x86_64 0:3.3.10-17.fc44                  fedora       3.4 MiB
 fontconfig                           x86_64 0:2.17.0-4.fc44                   fedora     776.4 KiB
 fonts-filesystem                     noarch 1:5.0.0-2.fc44                    fedora       0.0   B
 freetype                             x86_64 0:2.14.3-1.fc44                   updates    918.3 KiB
 fribidi                              x86_64 0:1.0.16-4.fc44                   fedora     190.0 KiB
 gcc-gfortran                         x86_64 0:16.2.1-2.fc44                   updates     45.2 MiB
 gcc-plugin-annobin                   x86_64 0:16.2.1-2.fc44                   updates     57.2 KiB
 gdk-pixbuf2                          x86_64 0:2.44.6^really2.44.4-3.fc44      updates      2.5 MiB
 gettext                              x86_64 0:0.26-5.fc44                     updates     12.9 MiB
 gettext-common-devel                 noarch 0:0.26-5.fc44                     updates    593.4 KiB
 gettext-devel                        x86_64 0:0.26-5.fc44                     updates      1.5 MiB
 gettext-envsubst                     x86_64 0:0.26-5.fc44                     updates     87.5 KiB
 gettext-libs                         x86_64 0:0.26-5.fc44                     updates      2.4 MiB
 gettext-runtime                      x86_64 0:0.26-5.fc44                     updates    738.3 KiB
 glib2                                x86_64 0:2.88.3-1.fc44                   updates     15.3 MiB
 glibc-devel                          x86_64 0:2.43-8.fc44                     updates      2.3 MiB
 glycin-libs                          x86_64 0:2.1.5-1.fc44                    updates      4.3 MiB
 glycin-loaders                       x86_64 0:2.1.5-1.fc44                    updates     13.8 MiB
 google-droid-sans-fonts              noarch 0:20200215-24.fc44                fedora       6.3 MiB
 google-noto-fonts-common             noarch 0:20251201-2.fc44                 fedora      17.7 KiB
 google-noto-sans-vf-fonts            noarch 0:20251201-2.fc44                 fedora       1.4 MiB
 graphite2                            x86_64 0:1.3.14-20.fc44                  fedora     191.5 KiB
 graphviz-libs                        x86_64 0:14.1.4-2.fc44                   updates      1.3 MiB
 groff-base                           x86_64 0:1.23.0-12.fc44                  fedora       3.9 MiB
 harfbuzz                             x86_64 0:14.1.0-2.fc44                   updates      2.8 MiB
 hdf-libs                             x86_64 0:4.3.0-5.fc44                    fedora     706.9 KiB
 hdf5                                 x86_64 0:1.14.6-7.fc44                   fedora       6.5 MiB
 hdf5-devel                           x86_64 0:1.14.6-7.fc44                   fedora       3.3 MiB
 highway                              x86_64 0:1.3.0-2.fc44                    fedora       5.5 MiB
 imath                                x86_64 0:3.1.12-6.fc44                   fedora     379.6 KiB
 jbig2dec-libs                        x86_64 0:0.20-8.fc44                     fedora     168.8 KiB
 jbigkit-libs                         x86_64 0:2.1-33.fc44                     fedora     117.2 KiB
 jsoncpp                              x86_64 0:1.9.6-3.fc44                    fedora     285.6 KiB
 kernel-headers                       x86_64 0:7.2.4-200.fc44                  updates      7.0 MiB
 keyutils-libs-devel                  x86_64 0:1.6.3-7.fc44                    fedora      48.2 KiB
 krb5-devel                           x86_64 0:1.22.2-4.fc44                   updates    709.9 KiB
 lcms2                                x86_64 0:2.16-7.fc44                     fedora     445.7 KiB
 libICE                               x86_64 0:1.1.2-4.fc44                    fedora     198.3 KiB
 libSM                                x86_64 0:1.2.5-4.fc44                    fedora     100.9 KiB
 libX11                               x86_64 0:1.8.13-1.fc44                   fedora       1.3 MiB
 libX11-common                        noarch 0:1.8.13-1.fc44                   fedora       1.1 MiB
 libXau                               x86_64 0:1.0.12-4.fc44                   fedora      72.8 KiB
 libXext                              x86_64 0:1.3.6-5.fc44                    fedora      89.8 KiB
 libXft                               x86_64 0:2.3.8-10.fc44                   fedora     168.3 KiB
 libXrender                           x86_64 0:0.9.12-4.fc44                   fedora      49.9 KiB
 libXt                                x86_64 0:1.3.1-4.fc44                    fedora     437.6 KiB
 libaec                               x86_64 0:1.1.5-1.fc44                    fedora      94.3 KiB
 libaec-devel                         x86_64 0:1.1.5-1.fc44                    fedora      22.5 KiB
 libaom                               x86_64 0:3.13.3-1.fc44                   updates      5.1 MiB
 libatomic                            x86_64 0:16.2.1-2.fc44                   updates     45.6 KiB
 libcom_err-devel                     x86_64 0:1.47.3-4.fc44                   fedora      16.7 KiB
 libcurl-devel                        x86_64 0:8.18.0-10.fc44                  updates      1.4 MiB
 libdatrie                            x86_64 0:0.2.14-2.fc44                   fedora      61.7 KiB
 libdav1d                             x86_64 0:1.5.4-1.fc44                    updates      1.8 MiB
 libdb                                x86_64 0:5.3.28-67.fc44                  fedora       1.9 MiB
 libdeflate                           x86_64 0:1.26-1.fc44                     updates    119.9 KiB
 libgfortran                          x86_64 0:16.2.1-2.fc44                   updates      3.4 MiB
 libgs                                x86_64 0:10.06.0-2.fc44                  fedora      24.6 MiB
 libheif                              x86_64 0:1.23.4-6.fc44                   updates      2.4 MiB
 libidn2-devel                        x86_64 0:2.3.8-3.fc44                    fedora     149.1 KiB
 libijs                               x86_64 0:0.35-26.fc44                    fedora      61.4 KiB
 libjpeg-turbo                        x86_64 0:3.1.3-1.fc44                    fedora     818.2 KiB
 libjxl                               x86_64 1:0.11.2-1.fc44                   updates      4.1 MiB
 libkadm5                             x86_64 0:1.22.2-4.fc44                   updates    217.8 KiB
 liblerc                              x86_64 0:4.0.0-10.fc44                   fedora     647.9 KiB
 liblqr-1                             x86_64 0:0.4.2-29.fc44                   fedora     101.1 KiB
 libminc                              x86_64 0:2.4.03-31.fc44                  updates    717.4 KiB
 libmpc                               x86_64 0:1.4.1-1.fc44                    updates    168.7 KiB
 libnghttp2-devel                     x86_64 0:1.68.0-5.fc44                   updates    288.0 KiB
 libnghttp3-devel                     x86_64 0:1.18.0-1.fc44                   updates    119.4 KiB
 libopenjph                           x86_64 0:0.25.3-3.fc44                   fedora     482.1 KiB
 libpaper                             x86_64 1:2.1.1-10.fc44                   fedora      48.6 KiB
 libpng                               x86_64 2:1.6.58-1.fc44                   updates    249.6 KiB
 libpsl-devel                         x86_64 0:0.21.5-7.fc44                   fedora     110.2 KiB
 libquadmath                          x86_64 0:16.2.1-2.fc44                   updates    325.9 KiB
 libquadmath-devel                    x86_64 0:16.2.1-2.fc44                   updates     22.2 KiB
 libraqm                              x86_64 0:0.10.1-4.fc44                   fedora      32.5 KiB
 librsvg2                             x86_64 0:2.62.3-1.fc44                   updates      5.0 MiB
 libseccomp                           x86_64 0:2.6.1-2.fc44                    updates    222.2 KiB
 libselinux-devel                     x86_64 0:3.11-2.fc44                     updates    121.9 KiB
 libsepol-devel                       x86_64 0:3.11-1.fc44                     updates    120.7 KiB
 libssh-devel                         x86_64 0:0.12.2-1.fc44                   updates    204.2 KiB
 libstdc++-devel                      x86_64 0:16.2.1-2.fc44                   updates     41.2 MiB
 libtextstyle                         x86_64 0:0.26-5.fc44                     updates    382.0 KiB
 libthai                              x86_64 0:0.1.30-2.fc44                   fedora     800.9 KiB
 libtiff                              x86_64 0:4.7.2-1.fc44                    updates    640.4 KiB
 libtirpc                             x86_64 0:1.3.8-0.fc44                    updates    208.3 KiB
 libultrahdr                          x86_64 0:1.4.0^20251202git8cbc983-1.fc44 fedora     384.9 KiB
 libuv                                x86_64 1:1.52.1-2.fc44                   updates    593.1 KiB
 libverto-devel                       x86_64 0:0.3.2-12.fc44                   fedora      25.7 KiB
 libvmaf                              x86_64 0:3.0.0-5.fc44                    fedora     846.8 KiB
 libwebp                              x86_64 0:1.6.0-3.fc44                    fedora     968.0 KiB
 libwmf-lite                          x86_64 0:0.2.16-1.fc44                   updates    167.9 KiB
 libxcb                               x86_64 0:1.17.0-7.fc44                   fedora       1.1 MiB
 libxcrypt-devel                      x86_64 0:4.5.2-3.fc44                    fedora      31.0 KiB
 libzip                               x86_64 0:1.11.4-3.fc44                   fedora     143.8 KiB
 lzo                                  x86_64 0:2.10-16.fc44                    fedora     174.8 KiB
 m4                                   x86_64 0:1.4.21-1.fc44                   fedora     881.1 KiB
 minc-tools                           x86_64 0:2.3.2-7.20260106gite382598.fc44 copr_base    1.0 MiB
 mpdecimal                            x86_64 0:4.0.1-3.fc44                    fedora     217.1 KiB
 ncurses                              x86_64 0:6.6-1.fc44                      fedora     611.4 KiB
 netcdf                               x86_64 0:4.9.3-2.fc44                    fedora       2.5 MiB
 ngtcp2-crypto-ossl-devel             x86_64 0:1.22.1-1.fc44                   updates      7.5 KiB
 ngtcp2-devel                         x86_64 0:1.22.1-1.fc44                   updates    262.8 KiB
 nifticlib                            x86_64 0:3.0.1-5.fc44                    fedora     739.4 KiB
 nifticlib-devel                      x86_64 0:3.0.1-5.fc44                    fedora     197.2 KiB
 ninja-build                          x86_64 0:1.13.2-2.fc44                   fedora     496.5 KiB
 noopenh264                           x86_64 0:2.6.0-4.fc44                    fedora      39.0 KiB
 openexr-libs                         x86_64 0:3.2.4-7.fc44                    fedora       6.6 MiB
 openjpeg                             x86_64 0:2.5.4-3.fc44                    fedora     464.2 KiB
 openssl-devel                        x86_64 1:3.5.8-1.fc44                    updates      4.5 MiB
 pango                                x86_64 0:1.57.1-1.fc44                   fedora       1.0 MiB
 pcre2-devel                          x86_64 0:10.47-1.fc44.1                  fedora       2.1 MiB
 pcre2-utf16                          x86_64 0:10.47-1.fc44.1                  fedora     655.2 KiB
 pcre2-utf32                          x86_64 0:10.47-1.fc44.1                  fedora     623.1 KiB
 perl                                 x86_64 4:5.42.3-525.fc44                 updates      0.0   B
 perl-Algorithm-Diff                  noarch 0:1.2010-15.fc44                  fedora     107.5 KiB
 perl-Archive-Tar                     noarch 0:3.12-1.fc44                     updates    157.9 KiB
 perl-Archive-Zip                     noarch 0:1.68-18.fc44                    fedora     291.1 KiB
 perl-Attribute-Handlers              noarch 0:1.03-525.fc44                   updates     39.9 KiB
 perl-AutoLoader                      noarch 0:5.74-525.fc44                   updates     20.6 KiB
 perl-AutoSplit                       noarch 0:5.74-525.fc44                   updates     23.1 KiB
 perl-B                               x86_64 0:1.89-525.fc44                   updates    501.2 KiB
 perl-Benchmark                       noarch 0:1.27-525.fc44                   updates     36.4 KiB
 perl-CPAN                            noarch 0:2.38-522.fc44                   fedora       1.9 MiB
 perl-CPAN-Meta                       noarch 0:2.150013-1.fc44                 fedora     595.5 KiB
 perl-CPAN-Meta-Requirements          noarch 0:2.145-1.fc44                    fedora      82.8 KiB
 perl-CPAN-Meta-YAML                  noarch 0:0.020-522.fc44                  fedora      52.1 KiB
 perl-Carp                            noarch 0:1.54-521.fc44                   fedora      46.6 KiB
 perl-Class-Struct                    noarch 0:0.68-525.fc44                   updates     25.4 KiB
 perl-Compress-Bzip2                  x86_64 0:2.28-25.fc44                    fedora     142.5 KiB
 perl-Compress-Raw-Bzip2              x86_64 0:2.218-1.fc44                    updates     72.7 KiB
 perl-Compress-Raw-Lzma               x86_64 0:2.221-1.fc44                    fedora     145.8 KiB
 perl-Compress-Raw-Zlib               x86_64 0:2.222-1.fc44                    fedora     172.3 KiB
 perl-Config-Extensions               noarch 0:0.03-525.fc44                   updates      2.7 KiB
 perl-Config-Perl-V                   noarch 0:0.39-1.fc44                     fedora      26.0 KiB
 perl-DBM_Filter                      noarch 0:0.07-525.fc44                   updates     28.7 KiB
 perl-DB_File                         x86_64 0:1.860-1.fc44                    fedora     189.6 KiB
 perl-Data-Dumper                     x86_64 0:2.192-523.fc44                  updates    115.5 KiB
 perl-Data-OptList                    noarch 0:0.114-8.fc44                    fedora      50.1 KiB
 perl-Data-Section                    noarch 0:0.200008-9.fc44                 fedora      42.7 KiB
 perl-Devel-PPPort                    x86_64 0:3.73-522.fc44                   fedora     889.6 KiB
 perl-Devel-Peek                      x86_64 0:1.36-525.fc44                   updates     43.4 KiB
 perl-Devel-SelfStubber               noarch 0:1.06-525.fc44                   updates      6.8 KiB
 perl-Devel-Size                      x86_64 0:0.86-1.fc44                     fedora      42.0 KiB
 perl-Digest                          noarch 0:1.20-521.fc44                   fedora      35.3 KiB
 perl-Digest-MD5                      x86_64 0:2.59-521.fc44                   fedora      59.6 KiB
 perl-Digest-SHA                      x86_64 1:6.04-522.fc44                   fedora     112.4 KiB
 perl-DirHandle                       noarch 0:1.05-525.fc44                   updates      3.4 KiB
 perl-Dumpvalue                       noarch 0:2.27-525.fc44                   updates     19.8 KiB
 perl-DynaLoader                      x86_64 0:1.57-525.fc44                   updates     32.1 KiB
 perl-Encode                          x86_64 4:3.21-521.fc44                   fedora       4.7 MiB
 perl-Encode-devel                    x86_64 4:3.21-521.fc44                   fedora      99.6 KiB
 perl-English                         noarch 0:1.11-525.fc44                   updates      6.2 KiB
 perl-Env                             noarch 0:1.06-521.fc44                   fedora      26.1 KiB
 perl-Errno                           x86_64 0:1.38-525.fc44                   updates      8.4 KiB
 perl-Exporter                        noarch 0:5.79-521.fc44                   fedora      54.3 KiB
 perl-ExtUtils-CBuilder               noarch 1:0.280242-521.fc44               fedora      97.3 KiB
 perl-ExtUtils-Command                noarch 2:7.76-522.fc44                   fedora       9.6 KiB
 perl-ExtUtils-Constant               noarch 0:0.25-525.fc44                   updates     85.9 KiB
 perl-ExtUtils-Embed                  noarch 0:1.35-525.fc44                   updates     15.6 KiB
 perl-ExtUtils-Install                noarch 0:2.22-521.fc44                   fedora      85.5 KiB
 perl-ExtUtils-MM-Utils               noarch 2:7.76-522.fc44                   fedora       2.9 KiB
 perl-ExtUtils-MakeMaker              noarch 2:7.76-522.fc44                   fedora     739.7 KiB
 perl-ExtUtils-Manifest               noarch 1:1.75-521.fc44                   fedora      84.8 KiB
 perl-ExtUtils-Miniperl               noarch 0:1.14-525.fc44                   updates      8.3 KiB
 perl-ExtUtils-ParseXS                noarch 1:3.61-2.fc44                     fedora     712.7 KiB
 perl-Fcntl                           x86_64 0:1.20-525.fc44                   updates     48.7 KiB
 perl-File-Basename                   noarch 0:2.86-525.fc44                   updates     14.0 KiB
 perl-File-Compare                    noarch 0:1.100.800-525.fc44              updates      5.6 KiB
 perl-File-Copy                       noarch 0:2.41-525.fc44                   updates     19.7 KiB
 perl-File-DosGlob                    x86_64 0:1.12-525.fc44                   updates     20.7 KiB
 perl-File-Fetch                      noarch 0:1.08-4.fc44                     fedora      60.3 KiB
 perl-File-Find                       noarch 0:1.44-525.fc44                   updates     42.0 KiB
 perl-File-HomeDir                    noarch 0:1.006-16.fc44                   fedora     119.3 KiB
 perl-File-Path                       noarch 0:2.18-522.fc44                   fedora      63.5 KiB
 perl-File-Temp                       noarch 1:0.231.200-2.fc44                fedora     163.7 KiB
 perl-File-Which                      noarch 0:1.27-15.fc44                    fedora      30.4 KiB
 perl-File-stat                       noarch 0:1.14-525.fc44                   updates     12.5 KiB
 perl-FileCache                       noarch 0:1.10-525.fc44                   updates      7.5 KiB
 perl-FileHandle                      noarch 0:2.05-525.fc44                   updates      9.4 KiB
 perl-Filter                          x86_64 2:1.65-2.fc44                     fedora     156.3 KiB
 perl-Filter-Simple                   noarch 0:0.96-521.fc44                   fedora      50.7 KiB
 perl-FindBin                         noarch 0:1.54-525.fc44                   updates      6.8 KiB
 perl-GDBM_File                       x86_64 1:1.24-525.fc44                   updates     79.5 KiB
 perl-Getopt-Long                     noarch 1:2.58-521.fc44                   fedora     144.5 KiB
 perl-Getopt-Std                      noarch 0:1.14-525.fc44                   updates     11.2 KiB
 perl-HTTP-Tiny                       noarch 0:0.096-1.fc44                    updates    162.4 KiB
 perl-Hash-Util                       x86_64 0:0.32-525.fc44                   updates     54.9 KiB
 perl-Hash-Util-FieldHash             x86_64 0:1.27-525.fc44                   updates     62.5 KiB
 perl-I18N-Collate                    noarch 0:1.02-525.fc44                   updates      7.1 KiB
 perl-I18N-LangTags                   noarch 0:0.45-525.fc44                   updates     82.4 KiB
 perl-I18N-Langinfo                   x86_64 0:0.24-525.fc44                   updates     34.6 KiB
 perl-IO                              x86_64 0:1.55-525.fc44                   updates    147.3 KiB
 perl-IO-Compress                     noarch 0:2.223-1.fc44                    updates      1.0 MiB
 perl-IO-Compress-Lzma                noarch 0:2.217-1.fc44                    fedora     217.1 KiB
 perl-IO-Socket-IP                    noarch 0:0.43-522.fc44                   fedora     100.3 KiB
 perl-IO-Socket-SSL                   noarch 0:2.098-2.fc44                    fedora     723.5 KiB
 perl-IO-Zlib                         noarch 1:1.15-521.fc44                   fedora      25.7 KiB
 perl-IPC-Cmd                         noarch 2:1.04-522.fc44                   fedora      84.9 KiB
 perl-IPC-Open3                       noarch 0:1.24-525.fc44                   updates     27.7 KiB
 perl-IPC-SysV                        x86_64 0:2.09-522.fc44                   fedora      73.6 KiB
 perl-IPC-System-Simple               noarch 0:1.30-17.fc44                    fedora      71.7 KiB
 perl-JSON-PP                         noarch 1:4.16-523.fc44                   fedora     141.9 KiB
 perl-Locale-Maketext                 noarch 0:1.33-522.fc44                   fedora     171.3 KiB
 perl-Locale-Maketext-Simple          noarch 1:0.21-525.fc44                   updates     12.8 KiB
 perl-MIME-Base32                     noarch 0:1.303-25.fc44                   fedora      30.7 KiB
 perl-MIME-Base64                     x86_64 0:3.16-521.fc44                   fedora      41.9 KiB
 perl-MRO-Compat                      noarch 0:0.15-13.fc44                    fedora      43.0 KiB
 perl-Math-BigInt                     noarch 1:2.0050.03-4.fc44                fedora       1.1 MiB
 perl-Math-BigInt-FastCalc            x86_64 0:0.502.000-521.fc44              fedora      43.9 KiB
 perl-Math-Complex                    noarch 0:1.63-525.fc44                   updates     85.1 KiB
 perl-Memoize                         noarch 0:1.17-525.fc44                   updates     64.7 KiB
 perl-Module-Build                    noarch 2:0.42.34-10.fc44                 fedora     654.2 KiB
 perl-Module-CoreList                 noarch 1:5.20260820-1.fc44               updates      1.3 MiB
 perl-Module-CoreList-tools           noarch 1:5.20260820-1.fc44               updates     18.6 KiB
 perl-Module-Load                     noarch 1:0.36-521.fc44                   fedora      14.9 KiB
 perl-Module-Load-Conditional         noarch 0:0.74-521.fc44                   fedora      28.7 KiB
 perl-Module-Loaded                   noarch 1:0.08-525.fc44                   updates      5.0 KiB
 perl-Module-Metadata                 noarch 0:1.000038-521.fc44               fedora      67.5 KiB
 perl-Module-Signature                noarch 0:0.93-3.fc44                     fedora     136.5 KiB
 perl-NDBM_File                       x86_64 0:1.18-525.fc44                   updates     28.4 KiB
 perl-NEXT                            noarch 0:0.69-525.fc44                   updates     23.6 KiB
 perl-Net                             noarch 0:1.04-525.fc44                   updates     22.4 KiB
 perl-Net-Ping                        noarch 0:2.76-521.fc44                   fedora     134.2 KiB
 perl-Net-SSLeay                      x86_64 0:1.94-12.fc44                    fedora       1.3 MiB
 perl-ODBM_File                       x86_64 0:1.20-525.fc44                   updates     28.4 KiB
 perl-Opcode                          x86_64 0:1.69-525.fc44                   updates     48.5 KiB
 perl-POSIX                           x86_64 0:2.23-525.fc44                   updates    229.4 KiB
 perl-Package-Generator               noarch 0:1.106-35.fc44                   fedora      29.9 KiB
 perl-Params-Check                    noarch 1:0.38-521.fc44                   fedora      27.6 KiB
 perl-Params-Util                     x86_64 0:1.102-20.fc44                   fedora      58.4 KiB
 perl-PathTools                       x86_64 0:3.94-521.fc44                   fedora     179.9 KiB
 perl-Perl-OSType                     noarch 0:1.010-522.fc44                  fedora      32.8 KiB
 perl-PerlIO-via-QuotedPrint          noarch 0:0.10-521.fc44                   fedora      30.2 KiB
 perl-Pod-Checker                     noarch 4:1.77-521.fc44                   fedora      52.2 KiB
 perl-Pod-Escapes                     noarch 1:1.07-521.fc44                   fedora      24.9 KiB
 perl-Pod-Functions                   noarch 0:1.14-525.fc44                   updates     14.4 KiB
 perl-Pod-Html                        noarch 0:1.35-525.fc44                   updates     42.3 KiB
 perl-Pod-Perldoc                     noarch 0:3.28.01-522.fc44                fedora     163.7 KiB
 perl-Pod-Simple                      noarch 1:3.47-4.fc44                     fedora     565.3 KiB
 perl-Pod-Usage                       noarch 4:2.05-521.fc44                   fedora      86.3 KiB
 perl-Safe                            noarch 0:2.47-525.fc44                   updates     30.7 KiB
 perl-Scalar-List-Utils               x86_64 5:1.70-2.fc44                     fedora     144.8 KiB
 perl-Search-Dict                     noarch 0:1.08-525.fc44                   updates      4.7 KiB
 perl-SelectSaver                     noarch 0:1.02-525.fc44                   updates      2.2 KiB
 perl-SelfLoader                      noarch 0:1.28-525.fc44                   updates     22.2 KiB
 perl-Socket                          x86_64 4:2.043-1.fc44                    updates    121.8 KiB
 perl-Software-License                noarch 0:0.104007-3.fc44                 fedora     500.7 KiB
 perl-Storable                        x86_64 1:3.37-522.fc44                   fedora     235.1 KiB
 perl-Sub-Exporter                    noarch 0:0.991-7.fc44                    fedora     194.9 KiB
 perl-Sub-Install                     noarch 0:0.929-9.fc44                    fedora      35.9 KiB
 perl-Symbol                          noarch 0:1.09-525.fc44                   updates      6.8 KiB
 perl-Sys-Hostname                    x86_64 0:1.25-525.fc44                   updates     15.7 KiB
 perl-Sys-Syslog                      x86_64 0:0.36-522.fc44                   fedora      94.6 KiB
 perl-Term-ANSIColor                  noarch 0:5.01-522.fc44                   fedora      97.5 KiB
 perl-Term-Cap                        noarch 0:1.18-521.fc44                   fedora      29.3 KiB
 perl-Term-Complete                   noarch 0:1.403-525.fc44                  updates      5.8 KiB
 perl-Term-ReadLine                   noarch 0:1.17-525.fc44                   updates     17.3 KiB
 perl-Term-Table                      noarch 0:0.028-2.fc44                    fedora      78.5 KiB
 perl-Test                            noarch 0:1.31-525.fc44                   updates     37.0 KiB
 perl-Test-Harness                    noarch 1:3.52-5.fc44                     fedora     560.8 KiB
 perl-Test-Simple                     noarch 3:1.302219-2.fc44                 fedora       1.8 MiB
 perl-Text-Abbrev                     noarch 0:1.02-525.fc44                   updates      3.1 KiB
 perl-Text-Balanced                   noarch 0:2.07-2.fc44                     fedora     111.5 KiB
 perl-Text-Diff                       noarch 0:1.45-25.fc44                    fedora      83.0 KiB
 perl-Text-Glob                       noarch 0:0.11-27.fc44                    fedora       8.4 KiB
 perl-Text-ParseWords                 noarch 0:3.31-521.fc44                   fedora      13.6 KiB
 perl-Text-Tabs+Wrap                  noarch 0:2024.001-521.fc44               fedora      22.6 KiB
 perl-Text-Template                   noarch 0:1.61-9.fc44                     fedora     112.4 KiB
 perl-Thread                          noarch 0:3.06-525.fc44                   updates     12.1 KiB
 perl-Thread-Queue                    noarch 0:3.14-521.fc44                   fedora      28.9 KiB
 perl-Thread-Semaphore                noarch 0:2.13-525.fc44                   updates     10.0 KiB
 perl-Tie                             noarch 0:4.6-525.fc44                    updates     32.1 KiB
 perl-Tie-File                        noarch 0:1.10-525.fc44                   updates     85.6 KiB
 perl-Tie-Memoize                     noarch 0:1.1-525.fc44                    updates      6.2 KiB
 perl-Tie-RefHash                     noarch 0:1.41-521.fc44                   fedora      35.9 KiB
 perl-Time                            noarch 0:1.04-525.fc44                   updates      9.8 KiB
 perl-Time-HiRes                      x86_64 4:1.9778-521.fc44                 fedora     115.6 KiB
 perl-Time-Local                      noarch 2:1.350-521.fc44                  fedora      69.0 KiB
 perl-Time-Piece                      x86_64 0:1.3600-525.fc44                 updates     71.1 KiB
 perl-URI                             noarch 0:5.36-1.fc44                     updates    275.7 KiB
 perl-Unicode-Collate                 x86_64 0:1.31-521.fc44                   fedora       4.2 MiB
 perl-Unicode-Normalize               x86_64 0:1.32-521.fc44                   fedora     486.0 KiB
 perl-Unicode-UCD                     noarch 0:0.81-525.fc44                   updates    206.4 KiB
 perl-User-pwent                      noarch 0:1.05-525.fc44                   updates     17.1 KiB
 perl-autodie                         noarch 0:2.37-522.fc44                   fedora     214.9 KiB
 perl-autouse                         noarch 0:1.11-525.fc44                   updates      5.9 KiB
 perl-base                            noarch 0:2.27-525.fc44                   updates     12.6 KiB
 perl-bignum                          noarch 0:0.67-522.fc44                   fedora     133.1 KiB
 perl-blib                            noarch 0:1.07-525.fc44                   updates      3.2 KiB
 perl-constant                        noarch 0:1.33-522.fc44                   fedora      26.2 KiB
 perl-debugger                        noarch 0:1.60-525.fc44                   updates    403.2 KiB
 perl-deprecate                       noarch 0:0.04-525.fc44                   updates      6.6 KiB
 perl-devel                           x86_64 4:5.42.3-525.fc44                 updates      3.8 MiB
 perl-diagnostics                     noarch 0:1.40-525.fc44                   updates    471.3 KiB
 perl-doc                             noarch 0:5.42.3-525.fc44                 updates     11.4 MiB
 perl-encoding                        x86_64 4:3.00-521.fc44                   fedora     149.5 KiB
 perl-encoding-warnings               noarch 0:0.14-525.fc44                   updates     10.1 KiB
 perl-experimental                    noarch 0:0.036-3.fc44                    fedora      43.4 KiB
 perl-fields                          noarch 0:2.27-525.fc44                   updates     11.9 KiB
 perl-filetest                        noarch 0:1.03-525.fc44                   updates      6.4 KiB
 perl-if                              noarch 0:0.61.000-525.fc44               updates      5.8 KiB
 perl-inc-latest                      noarch 2:0.500-32.fc44                   fedora      34.6 KiB
 perl-less                            noarch 0:0.03-525.fc44                   updates      4.9 KiB
 perl-lib                             x86_64 0:0.65-525.fc44                   updates      8.5 KiB
 perl-libnet                          noarch 0:3.15-522.fc44                   fedora     289.4 KiB
 perl-libnetcfg                       noarch 4:5.42.3-525.fc44                 updates     16.9 KiB
 perl-libs                            x86_64 4:5.42.3-525.fc44                 updates     11.6 MiB
 perl-local-lib                       noarch 0:2.000029-11.fc44                fedora     117.6 KiB
 perl-locale                          noarch 0:1.13-525.fc44                   updates      6.1 KiB
 perl-macros                          noarch 4:5.42.3-525.fc44                 updates      5.5 KiB
 perl-meta-notation                   noarch 0:5.42.3-525.fc44                 updates      2.0 KiB
 perl-mro                             x86_64 0:1.29-525.fc44                   updates     41.4 KiB
 perl-open                            noarch 0:1.13-525.fc44                   updates     11.3 KiB
 perl-overload                        noarch 0:1.40-525.fc44                   updates     71.6 KiB
 perl-overloading                     noarch 0:0.02-525.fc44                   updates      4.9 KiB
 perl-parent                          noarch 1:0.244-521.fc44                  fedora      10.3 KiB
 perl-perlfaq                         noarch 0:5.20250619-521.fc44             fedora     733.6 KiB
 perl-ph                              x86_64 0:5.42.3-525.fc44                 updates    278.9 KiB
 perl-podlators                       noarch 1:6.0.2-521.fc44                  fedora     317.5 KiB
 perl-sigtrap                         noarch 0:1.10-525.fc44                   updates     11.1 KiB
 perl-sort                            noarch 0:2.06-525.fc44                   updates      4.8 KiB
 perl-subs                            noarch 0:1.04-525.fc44                   updates      2.1 KiB
 perl-threads                         x86_64 1:2.43-521.fc44                   fedora     114.9 KiB
 perl-threads-shared                  x86_64 0:1.70-521.fc44                   fedora      83.5 KiB
 perl-utils                           noarch 0:5.42.3-525.fc44                 updates     97.0 KiB
 perl-vars                            noarch 0:1.05-525.fc44                   updates      3.9 KiB
 perl-version                         x86_64 9:0.99.33-522.fc44                fedora     128.6 KiB
 perl-vmsish                          noarch 0:1.04-525.fc44                   updates      6.6 KiB
 pixman                               x86_64 0:0.46.2-3.fc44                   fedora     718.2 KiB
 publicsuffix-list                    noarch 0:20260116-1.fc44                 fedora     342.2 KiB
 python-pip-wheel                     noarch 0:26.0.1-3.fc44                   updates      1.2 MiB
 python3                              x86_64 0:3.14.7-1.fc44                   updates     28.7 KiB
 python3-libs                         x86_64 0:3.14.7-1.fc44                   updates     44.0 MiB
 python3-pyparsing                    noarch 0:3.1.2-15.fc44                   fedora       1.0 MiB
 rav1e-libs                           x86_64 0:0.8.1-3.fc44                    fedora       3.1 MiB
 rhash                                x86_64 0:1.4.5-4.fc44                    fedora     354.8 KiB
 shared-mime-info                     x86_64 0:2.4-3.fc44                      fedora       5.2 MiB
 snappy                               x86_64 0:1.2.2-4.fc44                    fedora      79.9 KiB
 svt-av1-libs                         x86_64 0:3.1.2-2.fc44                    fedora       5.6 MiB
 systemtap-sdt-devel                  x86_64 0:5.5-2.fc44                      updates    184.5 KiB
 systemtap-sdt-dtrace                 x86_64 0:5.5-2.fc44                      updates    181.1 KiB
 tzdata                               noarch 0:2026c-2.fc44                    updates      1.2 MiB
 urw-base35-bookman-fonts             noarch 0:20200910-27.fc44                fedora       1.4 MiB
 urw-base35-c059-fonts                noarch 0:20200910-27.fc44                fedora       1.4 MiB
 urw-base35-d050000l-fonts            noarch 0:20200910-27.fc44                fedora      84.3 KiB
 urw-base35-fonts                     noarch 0:20200910-27.fc44                fedora       5.3 KiB
 urw-base35-fonts-common              noarch 0:20200910-27.fc44                fedora      37.4 KiB
 urw-base35-gothic-fonts              noarch 0:20200910-27.fc44                fedora       1.2 MiB
 urw-base35-nimbus-mono-ps-fonts      noarch 0:20200910-27.fc44                fedora       1.0 MiB
 urw-base35-nimbus-roman-fonts        noarch 0:20200910-27.fc44                fedora       1.4 MiB
 urw-base35-nimbus-sans-fonts         noarch 0:20200910-27.fc44                fedora       2.4 MiB
 urw-base35-p052-fonts                noarch 0:20200910-27.fc44                fedora       1.5 MiB
 urw-base35-standard-symbols-ps-fonts noarch 0:20200910-27.fc44                fedora      64.9 KiB
 urw-base35-z003-fonts                noarch 0:20200910-27.fc44                fedora     390.8 KiB
 vim-filesystem                       noarch 2:9.2.1119-1.fc44                 updates     40.0   B
 xml-common                           noarch 0:0.6.3-68.fc44                   fedora      78.4 KiB

Transaction Summary:
 Installing:       399 packages

Total size of inbound packages is 227 MiB. Need to download 227 MiB.
After this operation, 725 MiB extra will be used (install 725 MiB, remove 0 B).
[  1/399] automake-0:1.18.1-4.fc44.noar 100% |  37.2 MiB/s | 723.6 KiB |  00m00s
[  2/399] autoconf-0:2.72-10.fc44.noarc 100% |  32.5 MiB/s | 830.9 KiB |  00m00s
[  3/399] libtool-0:2.5.4-10.fc44.x86_6 100% |  86.7 MiB/s | 621.6 KiB |  00m00s
[  4/399] make-1:4.4.1-12.fc44.x86_64   100% |  95.8 MiB/s | 588.7 KiB |  00m00s
[  5/399] perl-Getopt-Tabular-0:0.3-33. 100% |   9.0 MiB/s |  46.2 KiB |  00m00s
[  6/399] bicpl-devel-0:2.0.0-1.2026010 100% |   1.1 MiB/s |  38.0 KiB |  00m00s
[  7/399] perl-MNI-0:0.08-1.20110321git 100% |  22.8 MiB/s | 163.3 KiB |  00m00s
[  8/399] libminc-devel-0:2.4.03-31.fc4 100% |  15.4 MiB/s |  78.7 KiB |  00m00s
[  9/399] netcdf-devel-0:4.9.3-2.fc44.x 100% |  20.4 MiB/s | 104.4 KiB |  00m00s
[ 10/399] perl-interpreter-4:5.42.3-525 100% |  17.5 MiB/s |  71.7 KiB |  00m00s
[ 11/399] zlib-ng-compat-devel-0:2.3.3- 100% |   4.7 MiB/s |  38.1 KiB |  00m00s
[ 12/399] emacs-filesystem-1:30.2-2.fc4 100% |   1.6 MiB/s |   8.0 KiB |  00m00s
[ 13/399] m4-0:1.4.21-1.fc44.x86_64     100% |  30.8 MiB/s | 347.3 KiB |  00m00s
[ 14/399] perl-Carp-0:1.54-521.fc44.noa 100% |   5.6 MiB/s |  28.8 KiB |  00m00s
[ 15/399] perl-Exporter-0:5.79-521.fc44 100% |   6.0 MiB/s |  30.8 KiB |  00m00s
[ 16/399] perl-File-Temp-1:0.231.200-2. 100% |  14.5 MiB/s |  59.6 KiB |  00m00s
[ 17/399] perl-Getopt-Long-1:2.58-521.f 100% |   8.9 MiB/s |  63.6 KiB |  00m00s
[ 18/399] perl-PathTools-0:3.94-521.fc4 100% |  14.2 MiB/s |  87.3 KiB |  00m00s
[ 19/399] perl-Text-ParseWords-0:3.31-5 100% |   2.7 MiB/s |  16.5 KiB |  00m00s
[ 20/399] perl-constant-0:1.33-522.fc44 100% |   3.7 MiB/s |  22.9 KiB |  00m00s
[ 21/399] perl-File-Path-0:2.18-522.fc4 100% |   5.7 MiB/s |  35.3 KiB |  00m00s
[ 22/399] perl-Thread-Queue-0:3.14-521. 100% |   3.5 MiB/s |  21.3 KiB |  00m00s
[ 23/399] gcc-c++-0:16.2.1-2.fc44.x86_6 100% | 144.6 MiB/s |  17.3 MiB |  00m00s
[ 24/399] perl-threads-1:2.43-521.fc44. 100% |   3.3 MiB/s |  58.2 KiB |  00m00s
[ 25/399] bicpl-0:2.0.0-1.20260106git8b 100% |  19.0 MiB/s | 409.6 KiB |  00m00s
[ 26/399] libminc-0:2.4.03-31.fc44.x86_ 100% |  31.0 MiB/s | 285.9 KiB |  00m00s
[ 27/399] cpp-0:16.2.1-2.fc44.x86_64    100% | 130.3 MiB/s |  14.6 MiB |  00m00s
[ 28/399] gcc-0:16.2.1-2.fc44.x86_64    100% | 157.3 MiB/s |  43.3 MiB |  00m00s
[ 29/399] cmake-filesystem-0:4.3.0-1.fc 100% | 348.7 KiB/s |  15.0 KiB |  00m00s
[ 30/399] cmake-0:4.3.0-1.fc44.x86_64   100% | 103.1 MiB/s |  14.4 MiB |  00m00s
[ 31/399] nifticlib-devel-0:3.0.1-5.fc4 100% |   3.8 MiB/s |  58.4 KiB |  00m00s
[ 32/399] hdf5-devel-0:1.14.6-7.fc44.x8 100% |  69.6 MiB/s |   1.5 MiB |  00m00s
[ 33/399] perl-Scalar-List-Utils-5:1.70 100% |   6.7 MiB/s |  75.4 KiB |  00m00s
[ 34/399] perl-libs-4:5.42.3-525.fc44.x 100% | 171.5 MiB/s |   2.6 MiB |  00m00s
[ 35/399] netcdf-0:4.9.3-2.fc44.x86_64  100% |  50.0 MiB/s | 870.2 KiB |  00m00s
[ 36/399] perl-parent-1:0.244-521.fc44. 100% |   3.6 MiB/s |  14.9 KiB |  00m00s
[ 37/399] perl-Pod-Usage-4:2.05-521.fc4 100% |  13.2 MiB/s |  40.7 KiB |  00m00s
[ 38/399] perl-threads-shared-0:1.70-52 100% |   8.8 MiB/s |  45.2 KiB |  00m00s
[ 39/399] jsoncpp-0:1.9.6-3.fc44.x86_64 100% |  13.4 MiB/s | 110.0 KiB |  00m00s
[ 40/399] hdf5-0:1.14.6-7.fc44.x86_64   100% | 121.8 MiB/s |   2.1 MiB |  00m00s
[ 41/399] cmake-data-0:4.3.0-1.fc44.noa 100% | 148.9 MiB/s |   2.7 MiB |  00m00s
[ 42/399] rhash-0:1.4.5-4.fc44.x86_64   100% |  28.2 MiB/s | 201.9 KiB |  00m00s
[ 43/399] libaec-devel-0:1.1.5-1.fc44.x 100% |   1.9 MiB/s |  15.2 KiB |  00m00s
[ 44/399] nifticlib-0:3.0.1-5.fc44.x86_ 100% |  27.4 MiB/s | 252.1 KiB |  00m00s
[ 45/399] blosc-0:1.21.6-10.fc44.x86_64 100% |  14.4 MiB/s |  59.0 KiB |  00m00s
[ 46/399] libaec-0:1.1.5-1.fc44.x86_64  100% |   9.3 MiB/s |  38.1 KiB |  00m00s
[ 47/399] perl-Pod-Perldoc-0:3.28.01-52 100% |  42.0 MiB/s |  86.1 KiB |  00m00s
[ 48/399] libzip-0:1.11.4-3.fc44.x86_64 100% |  18.3 MiB/s |  74.9 KiB |  00m00s
[ 49/399] perl-podlators-1:6.0.2-521.fc 100% |  41.8 MiB/s | 128.5 KiB |  00m00s
[ 50/399] snappy-0:1.2.2-4.fc44.x86_64  100% |   7.0 MiB/s |  43.2 KiB |  00m00s
[ 51/399] groff-base-0:1.23.0-12.fc44.x 100% | 187.2 MiB/s |   1.1 MiB |  00m00s
[ 52/399] perl-Pod-Simple-1:3.47-4.fc44 100% |  43.0 MiB/s | 220.0 KiB |  00m00s
[ 53/399] perl-Term-ANSIColor-0:5.01-52 100% |   6.7 MiB/s |  47.7 KiB |  00m00s
[ 54/399] perl-Term-Cap-0:1.18-521.fc44 100% |   3.1 MiB/s |  22.0 KiB |  00m00s
[ 55/399] perl-Errno-0:1.38-525.fc44.x8 100% |   7.0 MiB/s |  14.3 KiB |  00m00s
[ 56/399] perl-Pod-Escapes-1:1.07-521.f 100% |   9.7 MiB/s |  19.8 KiB |  00m00s
[ 57/399] perl-Text-Tabs+Wrap-0:2024.00 100% |  10.6 MiB/s |  21.8 KiB |  00m00s
[ 58/399] ncurses-0:6.6-1.fc44.x86_64   100% | 104.9 MiB/s | 429.8 KiB |  00m00s
[ 59/399] perl-AutoLoader-0:5.74-525.fc 100% |  10.0 MiB/s |  20.5 KiB |  00m00s
[ 60/399] perl-POSIX-0:2.23-525.fc44.x8 100% |  31.4 MiB/s |  96.3 KiB |  00m00s
[ 61/399] perl-File-Basename-0:2.86-525 100% |   5.4 MiB/s |  16.5 KiB |  00m00s
[ 62/399] perl-vars-0:1.05-525.fc44.noa 100% |   6.0 MiB/s |  12.3 KiB |  00m00s
[ 63/399] perl-Sys-Hostname-0:1.25-525. 100% |   5.3 MiB/s |  16.4 KiB |  00m00s
[ 64/399] perl-4:5.42.3-525.fc44.x86_64 100% |   4.2 MiB/s |  12.9 KiB |  00m00s
[ 65/399] minc-tools-0:2.3.2-7.20260106 100% |  70.5 MiB/s | 361.1 KiB |  00m00s
[ 66/399] perl-Pod-Functions-0:1.14-525 100% |   3.4 MiB/s |  14.0 KiB |  00m00s
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[339/399] libkadm5-0:1.22.2-4.fc44.x86_ 100% |  39.1 MiB/s |  80.0 KiB |  00m00s
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[349/399] openssl-devel-1:3.5.8-1.fc44. 100% | 190.2 MiB/s |   3.0 MiB |  00m00s
[350/399] libidn2-devel-0:2.3.8-3.fc44. 100% |  10.4 MiB/s |  64.1 KiB |  00m00s
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[358/399] libmpc-0:1.4.1-1.fc44.x86_64  100% |  12.3 MiB/s |  75.5 KiB |  00m00s
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[360/399] kernel-headers-0:7.2.4-200.fc 100% | 134.5 MiB/s |   1.7 MiB |  00m00s
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[364/399] shared-mime-info-0:2.4-3.fc44 100% |  12.7 MiB/s | 402.0 KiB |  00m00s
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[367/399] libjxl-1:0.11.2-1.fc44.x86_64 100% | 173.5 MiB/s |   1.2 MiB |  00m00s
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[369/399] librsvg2-0:2.62.3-1.fc44.x86_ 100% | 209.4 MiB/s |   1.9 MiB |  00m00s
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[371/399] LibRaw-0:0.22.2-1.fc44.x86_64 100% |   4.2 MiB/s | 486.7 KiB |  00m00s
[372/399] libwmf-lite-0:0.2.16-1.fc44.x 100% |   8.4 MiB/s |  77.1 KiB |  00m00s
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[374/399] mpdecimal-0:4.0.1-3.fc44.x86_ 100% |   7.4 MiB/s |  99.1 KiB |  00m00s
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[381/399] libdav1d-0:1.5.4-1.fc44.x86_6 100% | 129.9 MiB/s | 664.8 KiB |  00m00s
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[388/399] rav1e-libs-0:0.8.1-3.fc44.x86 100% | 106.8 MiB/s |   1.1 MiB |  00m00s
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[399/399] annobin-docs-0:13.14-1.fc44.n 100% |  10.6 MiB/s |  86.7 KiB |  00m00s
--------------------------------------------------------------------------------
[399/399] Total                         100% | 139.5 MiB/s | 226.7 MiB |  00m02s
Running transaction
[  1/401] Verify package files          100% | 499.0   B/s | 399.0   B |  00m01s
[  2/401] Prepare transaction           100% |   2.8 KiB/s | 399.0   B |  00m00s
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[386/401] Installing minc-tools-0:2.3.2 100% |  60.7 MiB/s |   1.0 MiB |  00m00s
[387/401] Installing netcdf-devel-0:4.9 100% |  28.4 MiB/s | 406.6 KiB |  00m00s
[388/401] Installing rhash-0:1.4.5-4.fc 100% |  27.1 MiB/s | 360.1 KiB |  00m00s
[389/401] Installing jsoncpp-0:1.9.6-3. 100% | 280.4 MiB/s | 287.1 KiB |  00m00s
[390/401] Installing cmake-0:4.3.0-1.fc 100% | 318.9 MiB/s |  40.5 MiB |  00m00s
[391/401] Installing cmake-data-0:4.3.0 100% | 125.9 MiB/s |  10.1 MiB |  00m00s
[392/401] Installing libminc-devel-0:2. 100% | 179.4 MiB/s | 367.4 KiB |  00m00s
[393/401] Installing m4-0:1.4.21-1.fc44 100% |  54.2 MiB/s | 887.6 KiB |  00m00s
[394/401] Installing autoconf-0:2.72-10 100% | 147.6 MiB/s |   2.8 MiB |  00m00s
[395/401] Installing automake-0:1.18.1- 100% |  96.7 MiB/s |   1.8 MiB |  00m00s
[396/401] Installing libtool-0:2.5.4-10 100% | 152.6 MiB/s |   2.7 MiB |  00m00s
[397/401] Installing bicpl-devel-0:2.0. 100% |  99.1 MiB/s | 203.0 KiB |  00m00s
[398/401] Installing perl-MNI-0:0.08-1. 100% | 147.5 MiB/s | 453.1 KiB |  00m00s
[399/401] Installing perl-Getopt-Tabula 100% |  86.0 MiB/s |  88.1 KiB |  00m00s
[400/401] Installing gcc-plugin-annobin 100% |   4.8 MiB/s |  58.8 KiB |  00m00s
[401/401] Installing annobin-plugin-gcc 100% |   1.6 MiB/s | 701.0 KiB |  00m00s
Warning: skipped OpenPGP checks for 4 packages from repository: copr_base
Complete!
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1790208000
Wrote: /builddir/build/SRPMS/conglomerate-1.6.80-1.20120308git166303d.fc44.src.rpm
Updating and loading repositories:
 updates                                100% | 215.5 KiB/s |  22.6 KiB |  00m00s
 fedora                                 100% | 229.5 KiB/s |  24.1 KiB |  00m00s
 Copr repository                        100% |  72.9 KiB/s |   1.5 KiB |  00m00s
Repositories loaded.
Package "autoconf-2.72-10.fc44.noarch" is already installed.
Package "automake-1.18.1-4.fc44.noarch" is already installed.
Package "bicpl-devel-2.0.0-1.20260106git8be98a9.fc44.x86_64" is already installed.
Package "gcc-16.2.1-2.fc44.x86_64" is already installed.
Package "gcc-c++-16.2.1-2.fc44.x86_64" is already installed.
Package "libminc-devel-2.4.03-31.fc44.x86_64" is already installed.
Package "libtool-2.5.4-10.fc44.x86_64" is already installed.
Package "make-1:4.4.1-12.fc44.x86_64" is already installed.
Package "netcdf-devel-4.9.3-2.fc44.x86_64" is already installed.
Package "perl-Getopt-Tabular-0.3-33.fc44.noarch" is already installed.
Package "perl-MNI-0.08-1.20110321git075ae53.fc44.noarch" is already installed.
Package "perl-interpreter-4:5.42.3-525.fc44.x86_64" is already installed.
Package "zlib-ng-compat-devel-2.3.3-3.fc44.x86_64" is already installed.

Nothing to do.
Finish: build setup for conglomerate-1.6.80-1.20120308git166303d.fc44.src.rpm
Start: rpmbuild conglomerate-1.6.80-1.20120308git166303d.fc44.src.rpm
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1790208000
Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.oBloJ6
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.DOxQmN
+ umask 022
+ cd /builddir/build/BUILD/conglomerate-1.6.80-build
+ cd /builddir/build/BUILD/conglomerate-1.6.80-build
+ rm -rf conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/conglomerate-166303d.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ mkdir -p m4
+ tar -xf /builddir/build/SOURCES/mni-acmacros.tar.gz --strip-components=1 -C m4
+ test -f m4/smr_WITH_BUILD_PATH.m4
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.sjEtny
+ umask 022
+ cd /builddir/build/BUILD/conglomerate-1.6.80-build
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b
+ sed -i 's/^dnl AC_PROG_CXX$/AC_PROG_CXX/' configure.ac
+ grep -q '^AC_PROG_CXX$' configure.ac
+ autoreconf -ifv -I m4
autoreconf: export WARNINGS=
autoreconf: Entering directory '.'
autoreconf: configure.ac: not using Gettext
autoreconf: running: aclocal -I m4 --force -I m4
autoreconf: configure.ac: tracing
autoreconf: running: libtoolize --copy --force
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: putting macros in 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac,
libtoolize: and rerunning libtoolize and aclocal.
autoreconf: configure.ac: not using Intltool
autoreconf: configure.ac: not using Gtkdoc
autoreconf: configure.ac: not needing autopoint
autoreconf: running: aclocal -I m4 --force -I m4
autoreconf: running: /usr/bin/autoconf --include=m4 --force
configure.ac:19: warning: The macro 'AC_PROG_LIBTOOL' is obsolete.
configure.ac:19: You should run autoupdate.
m4/libtool.m4:100: AC_PROG_LIBTOOL is expanded from...
configure.ac:19: the top level
configure.ac:21: warning: The macro 'AC_TRY_LINK' is obsolete.
configure.ac:21: You should run autoupdate.
./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from...
m4/mni_REQUIRE_LIB.m4:7: mni_REQUIRE_LIB is expanded from...
m4/mni_REQUIRE_MNILIBS.m4:1: mni_REQUIRE_MINC is expanded from...
m4/mni_REQUIRE_MNILIBS.m4:21: mni_REQUIRE_VOLUMEIO is expanded from...
m4/mni_REQUIRE_MNILIBS.m4:39: mni_REQUIRE_BICPL is expanded from...
configure.ac:21: the top level
configure.ac:21: warning: The macro 'AC_TRY_LINK' is obsolete.
configure.ac:21: You should run autoupdate.
./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from...
m4/mni_REQUIRE_LIB.m4:7: mni_REQUIRE_LIB is expanded from...
m4/mni_REQUIRE_MNILIBS.m4:21: mni_REQUIRE_VOLUMEIO is expanded from...
m4/mni_REQUIRE_MNILIBS.m4:39: mni_REQUIRE_BICPL is expanded from...
configure.ac:21: the top level
configure.ac:21: warning: The macro 'AC_TRY_LINK' is obsolete.
configure.ac:21: You should run autoupdate.
./lib/autoconf/general.m4:2918: AC_TRY_LINK is expanded from...
m4/mni_REQUIRE_LIB.m4:7: mni_REQUIRE_LIB is expanded from...
m4/mni_REQUIRE_MNILIBS.m4:39: mni_REQUIRE_BICPL is expanded from...
configure.ac:21: the top level
configure.ac:24: warning: AC_OUTPUT should be used without arguments.
configure.ac:24: You should run autoupdate.
autoreconf: running: /usr/bin/autoheader --include=m4 --force
autoreconf: running: automake --add-missing --copy --force-missing
configure.ac:14: installing './compile'
configure.ac:19: installing './config.guess'
configure.ac:19: installing './config.sub'
configure.ac:5: installing './install-sh'
configure.ac:5: installing './missing'
Makefile.am: installing './INSTALL'
Makefile.am: installing './depcomp'
autoreconf: Leaving directory '.'
+ sed -i s/volume_io2/minc_io/g configure
+ grep -q minc_io configure
+ cp /builddir/build/SOURCES/mni-volume-io-compat.h compat_minc.h
+ mkdir -p compat/volume_io
+ cat
++ pwd
++ pwd
+ export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS'
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS'
++ pwd
++ pwd
+ export 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h'
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h'
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ '[' '-flto=auto -ffat-lto-objectsx' '!=' x ']'
++ find . -type f -name configure -print
+ for file in $(find . -type f -name configure -print)
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed -r --in-place=.backup '/lt_cv_sys_global_symbol_to_cdecl=/s#(".*"|'\''.*'\'')#"sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./configure
+ diff -u ./configure.backup ./configure
--- ./configure.backup	2026-09-24 18:21:24.481966754 +0000
+++ ./configure	2026-09-24 18:21:24.520966623 +0000
@@ -7971,7 +7971,7 @@
 # Transform an extracted symbol line into a proper C declaration.
 # Some systems (esp. on ia64) link data and code symbols differently,
 # so use this general approach.
-lt_cv_sys_global_symbol_to_cdecl="$SED -n"\
+lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'"\
 $lt_cdecl_hook\
 " -e 's/^T .* \(.*\)$/extern int \1();/p'"\
 " -e 's/^$symcode$symcode* .* \(.*\)$/extern char \1;/p'"
@@ -19578,7 +19578,7 @@
 compiler='`$ECHO "$compiler" | $SED "$delay_single_quote_subst"`'
 GCC='`$ECHO "$GCC" | $SED "$delay_single_quote_subst"`'
 lt_cv_sys_global_symbol_pipe='`$ECHO "$lt_cv_sys_global_symbol_pipe" | $SED "$delay_single_quote_subst"`'
-lt_cv_sys_global_symbol_to_cdecl='`$ECHO "$lt_cv_sys_global_symbol_to_cdecl" | $SED "$delay_single_quote_subst"`'
+lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'"
 lt_cv_sys_global_symbol_to_import='`$ECHO "$lt_cv_sys_global_symbol_to_import" | $SED "$delay_single_quote_subst"`'
 lt_cv_sys_global_symbol_to_c_name_address='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address" | $SED "$delay_single_quote_subst"`'
 lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address_lib_prefix" | $SED "$delay_single_quote_subst"`'
+ '[' 1 = 1 ']'
+++ dirname ./configure
++ find . -name config.guess -o -name config.sub
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
++ basename ./config.sub
+ '[' -f /usr/lib/rpm/redhat/config.sub ']'
+ /usr/bin/rm -f ./config.sub
++ basename ./config.sub
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./config.sub
'/usr/lib/rpm/redhat/config.sub' -> './config.sub'
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
++ basename ./config.guess
+ '[' -f /usr/lib/rpm/redhat/config.guess ']'
+ /usr/bin/rm -f ./config.guess
++ basename ./config.guess
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./config.guess
'/usr/lib/rpm/redhat/config.guess' -> './config.guess'
+ '[' 1 = 1 ']'
+ '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors' ']'
++ find . -name ltmain.sh
+ for i in $(find . -name ltmain.sh)
+ /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors"~' ./ltmain.sh
++ grep -q runstatedir=DIR ./configure
++ echo --runstatedir=/run
+ ./configure --build=x86_64-redhat-linux --host=x86_64-redhat-linux --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/bin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --runstatedir=/run --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --with-minc2 --with-build-path=/usr 'LIBS=-lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm'
checking for a BSD-compatible install... /usr/bin/install -c
checking whether sleep supports fractional seconds... yes
checking filesystem timestamp resolution... 0.01
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking xargs -n works... yes
checking whether UID '1000' is supported by ustar format... yes
checking whether GID '135' is supported by ustar format... yes
checking how to create a ustar tar archive... gnutar
checking whether ln -s works... yes
checking whether make sets $(MAKE)... (cached) yes
checking for x86_64-redhat-linux-gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking whether gcc understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of gcc... none
checking whether the compiler supports GNU C++... yes
checking whether g++ accepts -g... yes
checking for g++ option to enable C++11 features... unsupported
checking for g++ option to enable C++98 features... unsupported
checking dependency style of g++... none
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for float.h... yes
checking build system type... x86_64-redhat-linux-gnu
checking host system type... x86_64-redhat-linux-gnu
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking the maximum length of command line arguments... 1572864
checking how to convert x86_64-redhat-linux-gnu file names to x86_64-redhat-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-redhat-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for file... file
checking for x86_64-redhat-linux-objdump... no
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for x86_64-redhat-linux-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for x86_64-redhat-linux-ranlib... no
checking for ranlib... ranlib
checking for x86_64-redhat-linux-ar... no
checking for ar... ar
checking for archiver @FILE support... @
checking for x86_64-redhat-linux-strip... no
checking for strip... strip
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /usr/bin/dd
checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
checking for x86_64-redhat-linux-mt... no
checking for mt... no
checking if : is a manifest tool... no
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... yes
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld -m elf_x86_64
checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC -DPIC
checking if g++ PIC flag -fPIC -DPIC works... yes
checking if g++ static flag -static works... no
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for library m... yes
checking for library netcdf... yes
checking for library z... yes
checking for library hdf5... yes
checking for library minc2... yes
checking for library minc_io... yes
checking for library bicpl... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating epm-header
config.status: creating nlfit_smr
config.status: creating mritotal_suppress
config.status: creating smooth_mask
config.status: creating compute_icbm_vols
config.status: creating multispectral_stx_registration
config.status: creating sphere_resample_obj
config.status: creating suppress_fat
config.status: creating regional_thickness
config.status: creating remap_to_lobes
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
+ /usr/bin/make -O -j4 V=1 VERBOSE=1
/usr/bin/make  all-am
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o autocrop_volume.o autocrop_volume.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o add_labels.o add_labels.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o apply_sphere_transform.o apply_sphere_transform.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o minc_labels.o minc_labels.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o average_voxels.o average_voxels.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o box_filter_volume.o box_filter_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o blur_surface.o blur_surface.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
blur_surface.c: In function ‘main’:
blur_surface.c:123:17: warning: ‘smooth_values’ may be used uninitialized [-Wmaybe-uninitialized]
  123 |             if( output_real( file, smooth_values[p] ) != OK ||
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
blur_surface.c:31:61: note: ‘smooth_values’ was declared here
   31 |     Real             fwhm, distance_ratio, *values, value, *smooth_values;
      |                                                             ^~~~~~~~~~~~~
blur_surface.c:104:30: warning: ‘value’ may be used uninitialized [-Wmaybe-uninitialized]
  104 |             smooth_values[p] = value;
      |             ~~~~~~~~~~~~~~~~~^~~~~~~
blur_surface.c:31:53: note: ‘value’ was declared here
   31 |     Real             fwhm, distance_ratio, *values, value, *smooth_values;
      |                                                     ^~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o chamfer_volume.o chamfer_volume.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o chop_tags.o chop_tags.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o box_filter_volume_nd.o box_filter_volume_nd.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o clamp_volume.o clamp_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o classify_sulcus.o classify_sulcus.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o clean_surface_labels.o clean_surface_labels.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
clean_surface_labels.c: In function ‘main’:
clean_surface_labels.c:59:12: warning: unused variable ‘fp’ [-Wunused-variable]
   59 |   FILE   * fp;
      |            ^~
clean_surface_labels.c: In function ‘get_surface_neighbours’:
clean_surface_labels.c:311:3: warning: multi-line comment [-Wcomment]
  311 |   //          /\   /\
      |   ^
clean_surface_labels.c: In function ‘read_scalar’:
clean_surface_labels.c:369:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
  369 |     fscanf( fp, "%f", &val );
      |     ^~~~~~~~~~~~~~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o cluster_volume.o cluster_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o clip_tags.o clip_tags.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
clip_tags.c: In function ‘main’:
clip_tags.c:336:28: warning: ‘voxel_volume’ may be used uninitialized [-Wmaybe-uninitialized]
  336 |                     volume += voxel_volume;
      |                     ~~~~~~~^~~~~~~~~~~~~~~
clip_tags.c:52:52: note: ‘voxel_volume’ was declared here
   52 |     Real                 min_dist, max_dist, dist, voxel_volume;
      |                                                    ^~~~~~~~~~~~
clip_tags.c:159:24: warning: ‘left_constant’ may be used uninitialized [-Wmaybe-uninitialized]
  159 |     plane_constants[0] = left_constant;
      |     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
clip_tags.c:58:26: note: ‘left_constant’ was declared here
   58 |     Real                 left_constant, right_constant;
      |                          ^~~~~~~~~~~~~
clip_tags.c:161:24: warning: ‘right_constant’ may be used uninitialized [-Wmaybe-uninitialized]
  161 |     plane_constants[1] = right_constant;
      |     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
clip_tags.c:58:41: note: ‘right_constant’ was declared here
   58 |     Real                 left_constant, right_constant;
      |                                         ^~~~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o coalesce_lines.o coalesce_lines.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compare_left_right.o compare_left_right.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
compare_left_right.c: In function ‘main’:
compare_left_right.c:235:20: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  235 |         if( i == 0 && j == 0 || t_stat[i][j] < min_t )
      |             ~~~~~~~^~~~~~~~~
compare_left_right.c:237:20: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  237 |         if( i == 0 && j == 0 || t_stat[i][j] > max_t )
      |             ~~~~~~~^~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compare_lengths.o compare_lengths.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o composite_images.o composite_images.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compare_left_right_groups.o compare_left_right_groups.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
compare_left_right_groups.c: In function ‘main’:
compare_left_right_groups.c:177:20: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  177 |         if( i == 0 && j == 0 || t < min_t )
      |             ~~~~~~~^~~~~~~~~
compare_left_right_groups.c:179:25: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  179 |         else if( i == 0 && j == 0 || t > max_t )
      |                  ~~~~~~~^~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o close_surface.o close_surface.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
close_surface.c: In function ‘label_inside_convex_hull’:
close_surface.c:336:34: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  336 |             if( x == 0 && y == 0 && z == 0 || voxel[c] < limits[0][c] )
      |                 ~~~~~~~~~~~~~~~~~^~~~~~~~~
close_surface.c:340:34: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  340 |             if( x == 0 && y == 0 && z == 0 || voxel[c] > limits[1][c] )
      |                 ~~~~~~~~~~~~~~~~~^~~~~~~~~
close_surface.c: In function ‘print_convex_boundaries’:
close_surface.c:881:43: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  881 |                      n_voxels == prev_max && i > prev_pos) )
      |                      ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o composite_minc_images.o composite_minc_images.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
composite_minc_images.c: In function ‘main’:
composite_minc_images.c:32:41: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
   32 |         !equal_strings( method, "add" ) &&
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
   33 |         !equal_strings( method, "composite" ) )
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compute_bounding_view.o compute_bounding_view.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o composite_volumes.o composite_volumes.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
composite_volumes.c: In function ‘main’:
composite_volumes.c:199:12: warning: ‘rgb_volume’ may be used uninitialized [-Wmaybe-uninitialized]
  199 |     (void) output_volume( output_filename, NC_UNSPECIFIED, FALSE,
      |            ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  200 |                           0.0, 0.0,
      |                           ~~~~~~~~~
  201 |                           rgb_volume, "Composited\n", NULL );
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
composite_volumes.c:17:32: note: ‘rgb_volume’ was declared here
   17 |     Volume             volume, rgb_volume;
      |                                ^~~~~~~~~~
composite_volumes.c:68:9: warning: ‘coding_type’ may be used uninitialized [-Wmaybe-uninitialized]
   68 |         initialize_colour_coding( &colour_coding, coding_type,
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   69 |                                   under_colour, over_colour, low, high );
      |                                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
composite_volumes.c:32:26: note: ‘coding_type’ was declared here
   32 |     Colour_coding_types  coding_type;
      |                          ^~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o concat_images.o concat_images.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o count_thresholded_volume.o count_thresholded_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o contour_slice.o contour_slice.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compute_resels.o compute_resels.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/volume_io.h:40:
compute_resels.c: In function ‘main’:
/usr/include/libminc/volume_io/basic.h:137:62: warning: ‘n_points’ may be used uninitialized [-Wmaybe-uninitialized]
  137 | #define  for_less( i, start, end )  for( (i) = (start);  (i) < (end);  ++(i) )
      |                                                          ~~~~^~~~~~~
compute_resels.c:18:58: note: ‘n_points’ was declared here
   18 |     int              i, n_objects, n_surfaces[2], group, n_points, s;
      |                                                          ^~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_2d_sheet.o create_2d_sheet.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
In function ‘create_path_between_nodes’,
    inlined from ‘create_2d_coordinates’ at create_2d_sheet.c:162:17,
    inlined from ‘main’ at create_2d_sheet.c:34:5:
create_2d_sheet.c:80:20: warning: ‘best_neigh’ may be used uninitialized [-Wmaybe-uninitialized]
   80 |     while( current != start_point );
      |            ~~~~~~~~^~~~~~~~~~~~~~
create_2d_sheet.c: In function ‘main’:
create_2d_sheet.c:51:37: note: ‘best_neigh’ was declared here
   51 |     int     n_path, *path, current, best_neigh, n, neigh;
      |                                     ^~~~~~~~~~
In function ‘create_2d_coordinates’,
    inlined from ‘main’ at create_2d_sheet.c:34:5:
create_2d_sheet.c:198:21: warning: ‘start_point’ may be used uninitialized [-Wmaybe-uninitialized]
  198 |     vertices_in_path[start_point] = TRUE;
      |                     ^
create_2d_sheet.c: In function ‘main’:
create_2d_sheet.c:109:51: note: ‘start_point’ was declared here
  109 |     int                  current_point, n_points, start_point, vertex;
      |                                                   ^~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_box.o create_box.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_label_map.o create_label_map.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_four_volumes.o create_four_volumes.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_2d_surface.o create_2d_surface.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
create_2d_surface.c: In function ‘create_2d_coordinates’:
create_2d_surface.c:284:32: warning: variable ‘dummy’ set but not used [-Wunused-but-set-variable=]
  284 |     Real              x, y, z, dummy;
      |                                ^~~~~
In file included from /usr/include/libminc/volume_io.h:43:
In function ‘create_path_between_poles’,
    inlined from ‘create_2d_coordinates’ at create_2d_surface.c:306:17,
    inlined from ‘main’ at create_2d_surface.c:37:5:
/usr/include/libminc/volume_io/arrays.h:78:34: warning: ‘best_neigh’ may be used uninitialized [-Wmaybe-uninitialized]
   78 |              (array) [(n_elems)] = (elem_to_add);                              \
      |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
create_2d_surface.c: In function ‘main’:
create_2d_surface.c:73:37: note: ‘best_neigh’ was declared here
   73 |     int     n_path, *path, current, best_neigh, n, neigh;
      |                                     ^~~~~~~~~~
In function ‘create_2d_coordinates’,
    inlined from ‘main’ at create_2d_surface.c:37:5:
create_2d_surface.c:407:35: warning: ‘best_hor’ may be used uninitialized [-Wmaybe-uninitialized]
  407 |                 horizontal[point] = best_hor;
      |                 ~~~~~~~~~~~~~~~~~~^~~~~~~~~~
create_2d_surface.c: In function ‘main’:
create_2d_surface.c:281:58: note: ‘best_hor’ was declared here
  281 |     float             *distances, neigh_dist, best_dist, best_hor;
      |                                                          ^~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o convex_hull.o convex_hull.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
convex_hull.c: In function ‘get_convex_hull’:
convex_hull.c:617:1: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation]
  617 | if(dbg) printf( "EDGE ENTRY %d:%d for poly %d\n", poly_vertices[edge],
      | ^~
convex_hull.c:620:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’
  620 |         ind = find_limit_plane( n_points, points, point_flags,
      |         ^~~
convex_hull.c: In function ‘get_surface_neighbours’:
convex_hull.c:908:3: warning: multi-line comment [-Wcomment]
  908 |   //          /\   /\
      |   ^
In file included from /usr/include/libminc/volume_io.h:46:
convex_hull.c: In function ‘get_plane_polygon_vertices’:
/usr/include/libminc/volume_io/geom_structs.h:60:53: warning: ‘horizontal’ may be used uninitialized [-Wmaybe-uninitialized]
   60 | #define  Point_coord( point, coord ) ((point).coords[coord])
convex_hull.c:422:40: note: ‘horizontal’ declared here
  422 |     Vector   v01, v02, normal, offset, horizontal, vertical;
      |                                        ^~~~~~~~~~
/usr/include/libminc/volume_io/geom_structs.h:97:56: warning: ‘horizontal’ may be used uninitialized [-Wmaybe-uninitialized]
   97 | #define  Vector_coord( vector, coord ) ((vector).coords[coord])
convex_hull.c:422:40: note: ‘horizontal’ declared here
  422 |     Vector   v01, v02, normal, offset, horizontal, vertical;
      |                                        ^~~~~~~~~~
/usr/include/libminc/volume_io/geom_structs.h:97:56: warning: ‘horizontal’ may be used uninitialized [-Wmaybe-uninitialized]
   97 | #define  Vector_coord( vector, coord ) ((vector).coords[coord])
convex_hull.c:422:40: note: ‘horizontal’ declared here
  422 |     Vector   v01, v02, normal, offset, horizontal, vertical;
      |                                        ^~~~~~~~~~
/usr/include/libminc/volume_io/geometry.h:37:24: warning: ‘vertical.coords[0]’ may be used uninitialized [-Wmaybe-uninitialized]
   37 | #define  Real_cast(x) ((VIO_Real) (x))
      |                       ~^~~~~~~~~~~~~~~
convex_hull.c:422:52: note: ‘vertical.coords[0]’ was declared here
  422 |     Vector   v01, v02, normal, offset, horizontal, vertical;
      |                                                    ^~~~~~~~
/usr/include/libminc/volume_io/geometry.h:37:24: warning: ‘vertical.coords[1]’ may be used uninitialized [-Wmaybe-uninitialized]
   37 | #define  Real_cast(x) ((VIO_Real) (x))
      |                       ~^~~~~~~~~~~~~~~
convex_hull.c:422:52: note: ‘vertical.coords[1]’ was declared here
  422 |     Vector   v01, v02, normal, offset, horizontal, vertical;
      |                                                    ^~~~~~~~
/usr/include/libminc/volume_io/geometry.h:37:24: warning: ‘vertical.coords[2]’ may be used uninitialized [-Wmaybe-uninitialized]
   37 | #define  Real_cast(x) ((VIO_Real) (x))
      |                       ~^~~~~~~~~~~~~~~
convex_hull.c:422:52: note: ‘vertical.coords[2]’ was declared here
  422 |     Vector   v01, v02, normal, offset, horizontal, vertical;
      |                                                    ^~~~~~~~
convex_hull.c: In function ‘find_limit_plane.isra.0’:
/usr/include/libminc/volume_io/geometry.h:37:24: warning: ‘horizontal.coords[0]’ may be used uninitialized [-Wmaybe-uninitialized]
   37 | #define  Real_cast(x) ((VIO_Real) (x))
      |                       ~^~~~~~~~~~~~~~~
convex_hull.c:236:14: note: ‘horizontal.coords[0]’ was declared here
  236 |     Vector   horizontal, vertical, offset;
      |              ^~~~~~~~~~
/usr/include/libminc/volume_io/geometry.h:37:24: warning: ‘horizontal.coords[1]’ may be used uninitialized [-Wmaybe-uninitialized]
   37 | #define  Real_cast(x) ((VIO_Real) (x))
      |                       ~^~~~~~~~~~~~~~~
convex_hull.c:236:14: note: ‘horizontal.coords[1]’ was declared here
  236 |     Vector   horizontal, vertical, offset;
      |              ^~~~~~~~~~
/usr/include/libminc/volume_io/geometry.h:37:24: warning: ‘horizontal.coords[2]’ may be used uninitialized [-Wmaybe-uninitialized]
   37 | #define  Real_cast(x) ((VIO_Real) (x))
      |                       ~^~~~~~~~~~~~~~~
convex_hull.c:236:14: note: ‘horizontal.coords[2]’ was declared here
  236 |     Vector   horizontal, vertical, offset;
      |              ^~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o get_filenames.o get_filenames.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_mahalanobis.o create_mahalanobis.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_landmark_full_volume.o create_landmark_full_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
create_landmark_full_volume.c: In function ‘is_left_id’:
create_landmark_full_volume.c:31:22: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
   31 |     return( id >= 10 && id <= 19 || id == 30 );
      |             ~~~~~~~~~^~~~~~~~~~~
create_landmark_full_volume.c: In function ‘is_right_id’:
create_landmark_full_volume.c:40:22: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
   40 |     return( id >= 20 && id <= 29 || id == 40 );
      |             ~~~~~~~~~^~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_surface_interpolation_lsq.o create_surface_interpolation_lsq.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
create_surface_interpolation_lsq.c: In function ‘create_surface_interpolation’:
create_surface_interpolation_lsq.c:277:30: warning: variable ‘n_edges’ set but not used [-Wunused-but-set-variable=]
  277 |     int               neigh, n_edges;
      |                              ^~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dilate_volume.o dilate_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_warping_points.o create_warping_points.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o diff_mahalanobis.o diff_mahalanobis.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
diff_mahalanobis.c: In function ‘min_function’:
diff_mahalanobis.c:153:59: warning: variable ‘close’ set but not used [-Wunused-but-set-variable=]
  153 |     Real              z1, z2, diff, deriv1[3], deriv2[3], close;
      |                                                           ^~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dim_image.o dim_image.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_deformation_distances.o dump_deformation_distances.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dilate_volume_completely.o dilate_volume_completely.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
dilate_volume_completely.c: In function ‘main’:
dilate_volume_completely.c:104:62: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  104 |                                     min_inside <= test_value &&
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~
  105 |                                     test_value <= max_inside )
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~  
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_points_to_tag_file.o dump_points_to_tag_file.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
dump_points_to_tag_file.c: In function ‘main’:
dump_points_to_tag_file.c:22:31: warning: format ‘%s’ expects a matching ‘char *’ argument [-Wformat=]
   22 |         print_error( "Usage: %s input1.obj [input2.obj] output.txt\n" );
      |                              ~^
      |                               |
      |                               char *
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_transform.o dump_transform.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_rms.o dump_rms.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_uv.o dump_uv.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
dump_uv.c: In function ‘main’:
dump_uv.c:22:31: warning: format ‘%s’ expects a matching ‘char *’ argument [-Wformat=]
   22 |         print_error( "Usage: %s input.obj output.txt\n" );
      |                              ~^
      |                               |
      |                               char *
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o evaluate.o evaluate.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o extract_largest_line.o extract_largest_line.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o extract_tag_slice.o extract_tag_slice.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
extract_tag_slice.c: In function ‘main’:
extract_tag_slice.c:114:30: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  114 |             if( !min_present && value != 0.0 ||
      |                 ~~~~~~~~~~~~~^~~~~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o fill_sulci.o fill_sulci.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_image_bounding_box.o find_image_bounding_box.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_surface_distances.o find_surface_distances.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_buried_surface.o find_buried_surface.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o search_utils.o search_utils.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
search_utils.c: In function ‘contains_value’:
search_utils.c:114:23: warning: ‘under_found’ may be used uninitialized [-Wmaybe-uninitialized]
  114 |                     if( under_found )
      |                       ^
search_utils.c:88:14: note: ‘under_found’ was declared here
   88 |     BOOLEAN  under_found, over_found;
      |              ^~~~~~~~~~~
search_utils.c:108:23: warning: ‘over_found’ may be used uninitialized [-Wmaybe-uninitialized]
  108 |                     if( over_found )
      |                       ^
search_utils.c:88:27: note: ‘over_found’ was declared here
   88 |     BOOLEAN  under_found, over_found;
      |                           ^~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_peaks.o find_peaks.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
find_peaks.c: In function ‘check_for_peak’:
find_peaks.c:753:10: warning: enumeration value ‘NEXTREMES’ not handled in switch [-Wswitch]
  753 |          switch (extreme) {
      |          ^~~~~~
find_peaks.c:760:10: warning: enumeration value ‘NEXTREMES’ not handled in switch [-Wswitch]
  760 |          switch (extreme) {
      |          ^~~~~~
find_peaks.c: At top level:
find_peaks.c:58:13: warning: ‘rcsid’ defined but not used [-Wunused-variable]
   58 | static char rcsid[]="$Header: /private-cvsroot/libraries/conglomerate/find_peaks.c,v 1.1 2004-04-22 13:15:01 bert Exp $";
      |             ^~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o model_objects.o model_objects.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
model_objects.c: In function ‘input_original_positions’:
model_objects.c:281:7: warning: ‘n_points’ may be used uninitialized [-Wmaybe-uninitialized]
  281 |     if( n_points != n_deforming_points )
      |       ^
model_objects.c:244:37: note: ‘n_points’ was declared here
  244 |     int               i, n_objects, n_points;
      |                                     ^~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o deform_line.o deform_line.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
deform_line.c: In function ‘one_iteration_lines’:
deform_line.c:59:50: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
   59 |         lines->end_indices[0] != lines->n_points &&
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
   60 |         lines->end_indices[0] != lines->n_points+1 )
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_in_direction.o find_in_direction.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
find_in_direction.c: In function ‘find_boundary_in_direction’:
find_in_direction.c:431:27: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  431 |                 (isovalue &&
      |                  ~~~~~~~~~^~
  432 |                  check_voxel_for_isovalue( lookup, volume, label_volume,
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  433 |                                            degrees_continuity,
      |                                            ~~~~~~~~~~~~~~~~~~~
  434 |                                            voxel_index0,
      |                                            ~~~~~~~~~~~~~
  435 |                                            origin0, direction0,
      |                                            ~~~~~~~~~~~~~~~~~~~~
  436 |                                            FALSE,
      |                                            ~~~~~~
  437 |                                            current_distance0, max_dist,
      |                                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  438 |                                            boundary_def->min_isovalue,
      |                                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~
  439 |                                            boundary_def->normal_direction,
      |                                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  440 |                                            found, &found_dist ) ||
      |                                            ~~~~~~~~~~~~~~~~~~~~
find_in_direction.c:513:27: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  513 |                 (isovalue &&
      |                  ~~~~~~~~~^~
  514 |                  check_voxel_for_isovalue( lookup, volume, label_volume,
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  515 |                                            degrees_continuity,
      |                                            ~~~~~~~~~~~~~~~~~~~
  516 |                                            voxel_index1,
      |                                            ~~~~~~~~~~~~~
  517 |                                            origin1, direction1,
      |                                            ~~~~~~~~~~~~~~~~~~~~
  518 |                                            TRUE,
      |                                            ~~~~~
  519 |                                            current_distance1, max_dist,
      |                                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  520 |                                            boundary_def->min_isovalue,
      |                                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |                                            boundary_def->normal_direction,
      |                                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |                                            found, &found_dist ) ||
      |                                            ~~~~~~~~~~~~~~~~~~~~
find_in_direction.c: In function ‘check_voxel_for_isovalue’:
find_in_direction.c:727:59: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  727 |                     if( normal_direction == TOWARDS_LOWER && dot_prod > 0.0 ||
      |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o intersect_voxel.o intersect_voxel.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_tag_outliers.o find_tag_outliers.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_vertex.o find_vertex.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/volume_io.h:44:
find_vertex.c: In function ‘main’:
find_vertex.c:50:27: warning: ‘ind’ may be used uninitialized [-Wmaybe-uninitialized]
   50 |             Point_z(points[ind]), best_dist );
      |                           ^
find_vertex.c:12:34: note: ‘ind’ was declared here
   12 |     int            i, n_objects, ind, n_points, best_poly, n_items;
      |                                  ^~~
find_vertex.c:66:9: warning: ‘best_poly’ may be used uninitialized [-Wmaybe-uninitialized]
   66 |         print( "Closest polygon: %d\n", best_poly );
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
find_vertex.c:12:49: note: ‘best_poly’ was declared here
   12 |     int            i, n_objects, ind, n_points, best_poly, n_items;
      |                                                 ^~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_volume_centroid.o find_volume_centroid.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o models.o models.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o conjugate_min.o conjugate_min.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o conjugate_grad.o conjugate_grad.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o line_minimization.o line_minimization.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
line_minimization.c: In function ‘minimize_along_line’:
line_minimization.c:142:25: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  142 |         if( f_next < f1 && t_next < t1 ||
      |             ~~~~~~~~~~~~^~~~~~~~~~~~~~
line_minimization.c:150:30: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  150 |         else if( f_next < f1 && t_next >= t1 ||
      |                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~
line_minimization.c:158:30: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  158 |         else if( f_next > f1 && t_next < t1 ||
      |                  ~~~~~~~~~~~~^~~~~~~~~~~~~~
line_minimization.c:164:30: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  164 |         else if( f_next > f1 && t_next >= t1 ||
      |                  ~~~~~~~~~~~~^~~~~~~~~~~~~~~
line_minimization.c:102:7: warning: ‘t2’ may be used uninitialized [-Wmaybe-uninitialized]
  102 |     if( t2 < t0 )
      |       ^
line_minimization.c:38:30: note: ‘t2’ was declared here
   38 |     Real             t0, t1, t2, f0, f1, f2, t_next, f_next, step, fsize;
      |                              ^~
line_minimization.c:117:39: warning: ‘f0’ may be used uninitialized [-Wmaybe-uninitialized]
  117 |         bottom = 2.0 * (t2*f0-t0*f2-t1*f0+t1*f2-t2*f1+t0*f1);
      |                                     ~~^~~
line_minimization.c:38:34: note: ‘f0’ was declared here
   38 |     Real             t0, t1, t2, f0, f1, f2, t_next, f_next, step, fsize;
      |                                  ^~
line_minimization.c:117:45: warning: ‘f2’ may be used uninitialized [-Wmaybe-uninitialized]
  117 |         bottom = 2.0 * (t2*f0-t0*f2-t1*f0+t1*f2-t2*f1+t0*f1);
      |                                           ~~^~~
line_minimization.c:38:42: note: ‘f2’ was declared here
   38 |     Real             t0, t1, t2, f0, f1, f2, t_next, f_next, step, fsize;
      |                                          ^~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o fit_curve.o fit_curve.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o fit_curve2.o fit_curve2.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
fit_curve2.c: In function ‘fit_curve’:
fit_curve2.c:783:72: warning: variable ‘fit’ set but not used [-Wunused-but-set-variable=]
  783 |     Real               *parameters, range_tolerance, domain_tolerance, fit;
      |                                                                        ^~~
fit_curve2.c: In function ‘get_closest_segment’:
fit_curve2.c:606:11: warning: ‘best_seg’ may be used uninitialized [-Wmaybe-uninitialized]
  606 |     return( best_seg );
      |           ^
fit_curve2.c:590:16: note: ‘best_seg’ was declared here
  590 |     int   seg, best_seg;
      |                ^~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_polygons.o flatten_polygons.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
flatten_polygons.c: In function ‘normalize_size’:
flatten_polygons.c:59:14: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=]
   59 |     Vector   offset, diff;
      |              ^~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_sheet.o flatten_sheet.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
In function ‘flatten_polygons’,
    inlined from ‘main’ at flatten_sheet.c:101:5:
flatten_sheet.c:286:44: warning: ‘which’ may be used uninitialized [-Wmaybe-uninitialized]
  286 |             fixed_indices[i+1] = neighbours[which][i];
      |                                            ^
flatten_sheet.c: In function ‘main’:
flatten_sheet.c:252:64: note: ‘which’ was declared here
  252 |     int              i, p, point, *n_neighbours, **neighbours, which;
      |                                                                ^~~~~
flatten_sheet.c:259:22: warning: ‘x_dir.coords[0]’ may be used uninitialized [-Wmaybe-uninitialized]
  259 |     Vector           x_dir, y_dir, offset, p12, p13;
      |                      ^~~~~
flatten_sheet.c:259:29: warning: ‘y_dir.coords[0]’ may be used uninitialized [-Wmaybe-uninitialized]
  259 |     Vector           x_dir, y_dir, offset, p12, p13;
      |                             ^~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o fit_3d.o fit_3d.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
fit_3d.c: In function ‘create_image_coefficients’:
fit_3d.c:483:16: warning: variable ‘n_involved’ set but not used [-Wunused-but-set-variable=]
  483 |     int        n_involved, inv_index, neigh_parm_index, n_vectors, v;
      |                ^~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_sheet3.o flatten_sheet3.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
flatten_sheet3.c: In function ‘create_coefficients’:
flatten_sheet3.c:463:36: warning: format ‘%g’ expects a matching ‘double’ argument [-Wformat=]
  463 |                 print_error( "Y = %g\n" );
      |                                   ~^
      |                                    |
      |                                    double
In file included from /usr/include/libminc/volume_io/arrays.h:32,
                 from /usr/include/libminc/volume_io.h:43:
In function ‘flatten_polygons’,
    inlined from ‘main’ at flatten_sheet3.c:140:5:
flatten_sheet3.c:609:34: warning: ‘which’ may be used uninitialized [-Wmaybe-uninitialized]
  609 |         ALLOC( flat, n_neighbours[which] );
      |                                  ^
flatten_sheet3.c: In function ‘main’:
flatten_sheet3.c:581:35: note: ‘which’ was declared here
  581 |     int              i, p, point, which, n;
      |                                   ^~~~~
flatten_sheet3.c:588:22: warning: ‘x_dir.coords[0]’ may be used uninitialized [-Wmaybe-uninitialized]
  588 |     Vector           x_dir, y_dir, offset;
      |                      ^~~~~
flatten_sheet3.c:588:29: warning: ‘y_dir.coords[0]’ may be used uninitialized [-Wmaybe-uninitialized]
  588 |     Vector           x_dir, y_dir, offset;
      |                             ^~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flip_tags.o flip_tags.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_to_sphere.o flatten_to_sphere.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flip_volume.o flip_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o f_prob.o f_prob.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_to_sphere2.o flatten_to_sphere2.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
In function ‘flatten_polygons’,
    inlined from ‘main’ at flatten_to_sphere2.c:78:5:
flatten_to_sphere2.c:788:38: warning: ‘radius’ may be used uninitialized [-Wmaybe-uninitialized]
  788 |         parameters[n_parameters-1] = (dtype) radius;
      |                                      ^~~~~~~~~~~~~~
flatten_to_sphere2.c: In function ‘main’:
flatten_to_sphere2.c:643:27: note: ‘radius’ was declared here
  643 |     Real             len, radius, *weights[3][3], *x_flat, *y_flat, *z_flat;
      |                           ^~~~~~
In function ‘evaluate_fit_along_line’,
    inlined from ‘minimize_along_line’ at flatten_to_sphere2.c:566:5,
    inlined from ‘flatten_polygons’ at flatten_to_sphere2.c:833:9,
    inlined from ‘main’ at flatten_to_sphere2.c:78:5:
flatten_to_sphere2.c:412:53: warning: ‘dr’ may be used uninitialized [-Wmaybe-uninitialized]
  412 |         l2 = dx1 * dx1 + dy1 * dy1 + dz1 * dz1 - dr * dr;
      |                                                  ~~~^~~~
flatten_to_sphere2.c: In function ‘main’:
flatten_to_sphere2.c:367:24: note: ‘dr’ was declared here
  367 |     Real   dx, dy, dz, dr, dist, radius, radius2;
      |                        ^~
In function ‘evaluate_fit_along_line’,
    inlined from ‘minimize_along_line’ at flatten_to_sphere2.c:566:5,
    inlined from ‘flatten_polygons’ at flatten_to_sphere2.c:833:9,
    inlined from ‘main’ at flatten_to_sphere2.c:78:5:
flatten_to_sphere2.c:411:54: warning: ‘radius’ may be used uninitialized [-Wmaybe-uninitialized]
  411 |         l1 = x1 * dx1 + y1 * dy1 + z1 * dz1 - radius * dr;
      |                                               ~~~~~~~^~~~
flatten_to_sphere2.c: In function ‘main’:
flatten_to_sphere2.c:367:34: note: ‘radius’ was declared here
  367 |     Real   dx, dy, dz, dr, dist, radius, radius2;
      |                                  ^~~~~~
In function ‘evaluate_fit_along_line’,
    inlined from ‘minimize_along_line’ at flatten_to_sphere2.c:566:5,
    inlined from ‘flatten_polygons’ at flatten_to_sphere2.c:833:9,
    inlined from ‘main’ at flatten_to_sphere2.c:78:5:
flatten_to_sphere2.c:410:12: warning: ‘radius2’ may be used uninitialized [-Wmaybe-uninitialized]
  410 |         l0 = x1 * x1 + y1 * y1 + z1 * z1 - radius2;
      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
flatten_to_sphere2.c: In function ‘main’:
flatten_to_sphere2.c:367:42: note: ‘radius2’ was declared here
  367 |     Real   dx, dy, dz, dr, dist, radius, radius2;
      |                                          ^~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o gaussian_blur_peaks.o gaussian_blur_peaks.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o get_tic.o get_tic.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
get_tic.c: In function ‘main’:
get_tic.c:56:37: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
   55 |         voxel_flag_string[0] != 'v' && voxel_flag_string[0] != 'w' &&
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   56 |         voxel_flag_string[0] != 'V' && voxel_flag_string[0] != 'W' )
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o histogram_volume.o histogram_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
histogram_volume.c: In function ‘main’:
histogram_volume.c:227:30: warning: ‘min_pos’ may be used uninitialized [-Wmaybe-uninitialized]
  227 |     pos = min_pos + (max_pos - min_pos) *
      |                     ~~~~~~~~~^~~~~~~~~~
histogram_volume.c:30:48: note: ‘min_pos’ was declared here
   30 |     Real                 x_pos, y_height, pos, min_pos, max_pos;
      |                                                ^~~~~~~
histogram_volume.c:227:30: warning: ‘max_pos’ may be used uninitialized [-Wmaybe-uninitialized]
  227 |     pos = min_pos + (max_pos - min_pos) *
      |                     ~~~~~~~~~^~~~~~~~~~
histogram_volume.c:30:57: note: ‘max_pos’ was declared here
   30 |     Real                 x_pos, y_height, pos, min_pos, max_pos;
      |                                                         ^~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o intensity_statistics.o intensity_statistics.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
intensity_statistics.c: In function ‘main’:
intensity_statistics.c:209:9: warning: ‘label_volume’ may be used uninitialized [-Wmaybe-uninitialized]
  209 |         delete_volume( label_volume );
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
intensity_statistics.c:28:34: note: ‘label_volume’ was declared here
   28 |     Volume               volume, label_volume;
      |                                  ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o group_diff.o group_diff.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/volume_io.h:40:
group_diff.c: In function ‘main’:
/usr/include/libminc/volume_io/basic.h:137:62: warning: ‘n_points’ may be used uninitialized [-Wmaybe-uninitialized]
  137 | #define  for_less( i, start, end )  for( (i) = (start);  (i) < (end);  ++(i) )
      |                                                          ~~~~^~~~~~~
group_diff.c:19:58: note: ‘n_points’ was declared here
   19 |     int              i, n_objects, n_surfaces[2], group, n_points, s, p;
      |                                                          ^~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o interpolate_tags.o interpolate_tags.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o lookup_labels.o lookup_labels.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_diff_volume.o make_diff_volume.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make_diff_volume.c: In function ‘main’:
make_diff_volume.c:64:49: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
   64 |         in_one = (min1 > max1 || min1 <= value1 && value1 <= max1);
      |                                  ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
make_diff_volume.c:65:49: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
   65 |         in_two = (min2 > max2 || min2 <= value2 && value2 <= max2);
      |                                  ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o labels_to_rgb.o labels_to_rgb.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o label_sulci.o label_sulci.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_gradient_volume.o make_gradient_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make_gradient_volume.c: In function ‘main’:
make_gradient_volume.c:47:27: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
   47 |     if( deriv_number != 1 && deriv_number != 2 || order != 1 && order != 3 )
      |         ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_grid_lines.o make_grid_lines.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_slice.o make_slice.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_geodesic_volume.o make_geodesic_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make_geodesic_volume.c: In function ‘label_surface_voxels’:
make_geodesic_volume.c:168:40: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  168 |                 if( dx == 0 && dy == 0 && dz == 0 ||
      |                     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
make_geodesic_volume.c:173:40: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  173 |                 if( dx == 0 && dy == 0 && dz == 0 ||
      |                     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In function ‘find_nearest_voxel’,
    inlined from ‘main’ at make_geodesic_volume.c:122:5:
make_geodesic_volume.c:247:49: warning: array subscript 3 is above array bounds of ‘int[3]’ [-Warray-bounds=]
  247 |                 limits[face][d] = limits[1-face][d];
      |                                   ~~~~~~~~~~~~~~^~~
make_geodesic_volume.c: In function ‘main’:
make_geodesic_volume.c:213:14: note: while referencing ‘limits’
  213 |     int      limits[2][N_DIMENSIONS];
      |              ^~~~~~
In function ‘find_nearest_voxel’,
    inlined from ‘main’ at make_geodesic_volume.c:122:5:
make_geodesic_volume.c:247:29: warning: array subscript 3 is above array bounds of ‘int[3]’ [-Warray-bounds=]
  247 |                 limits[face][d] = limits[1-face][d];
      |                 ~~~~~~~~~~~~^~~
make_geodesic_volume.c: In function ‘main’:
make_geodesic_volume.c:213:14: note: while referencing ‘limits’
  213 |     int      limits[2][N_DIMENSIONS];
      |              ^~~~~~
In function ‘compute_geodesic_volume’,
    inlined from ‘main’ at make_geodesic_volume.c:124:5:
make_geodesic_volume.c:422:5: warning: ‘MEM[(int *)&origin]’ may be used uninitialized [-Wmaybe-uninitialized]
  422 |     set_volume_real_value( volume, origin[X], origin[Y], origin[Z], 0, 0, 0.0 );
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make_geodesic_volume.c: In function ‘main’:
make_geodesic_volume.c:49:30: note: ‘MEM[(int *)&origin]’ was declared here
   49 |     int                 dim, origin[N_DIMENSIONS];
      |                              ^~~~~~
In function ‘compute_geodesic_volume’,
    inlined from ‘main’ at make_geodesic_volume.c:124:5:
make_geodesic_volume.c:422:5: warning: ‘MEM[(int *)&origin + 4B]’ may be used uninitialized [-Wmaybe-uninitialized]
  422 |     set_volume_real_value( volume, origin[X], origin[Y], origin[Z], 0, 0, 0.0 );
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make_geodesic_volume.c: In function ‘main’:
make_geodesic_volume.c:49:30: note: ‘MEM[(int *)&origin + 4B]’ was declared here
   49 |     int                 dim, origin[N_DIMENSIONS];
      |                              ^~~~~~
In function ‘compute_geodesic_volume’,
    inlined from ‘main’ at make_geodesic_volume.c:124:5:
make_geodesic_volume.c:422:5: warning: ‘MEM[(int *)&origin + 8B]’ may be used uninitialized [-Wmaybe-uninitialized]
  422 |     set_volume_real_value( volume, origin[X], origin[Y], origin[Z], 0, 0, 0.0 );
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make_geodesic_volume.c: In function ‘main’:
make_geodesic_volume.c:49:30: note: ‘MEM[(int *)&origin + 8B]’ was declared here
   49 |     int                 dim, origin[N_DIMENSIONS];
      |                              ^~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_line_links.o make_line_links.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_sphere_transform.o make_sphere_transform.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_surface_bitlist.o make_surface_bitlist.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make_surface_bitlist.c: In function ‘label_surface_voxels’:
make_surface_bitlist.c:161:44: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  161 |                     if( dx == 0 && dy == 0 && dz == 0 ||
      |                         ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
make_surface_bitlist.c:166:44: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  166 |                     if( dx == 0 && dy == 0 && dz == 0 ||
      |                         ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o map_surface_to_sheet.o map_surface_to_sheet.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o map_sheets.o map_sheets.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o mask_values.o mask_values.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o map_colours_to_sphere.o map_colours_to_sphere.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
map_colours_to_sphere.c: In function ‘main’:
map_colours_to_sphere.c:282:36: warning: ‘interp[0]’ may be used uninitialized [-Wmaybe-uninitialized]
  282 |     Real     coefs[8], best_value, interp[4], value;
      |                                    ^~~~~~
map_colours_to_sphere.c:282:36: warning: ‘interp[1]’ may be used uninitialized [-Wmaybe-uninitialized]
In function ‘evaluate_volume_by_voting’,
    inlined from ‘map_colours_to_sphere_topology’ at map_colours_to_sphere.c:252:13,
    inlined from ‘main’ at map_colours_to_sphere.c:93:5:
map_colours_to_sphere.c:375:23: warning: ‘interp[2]’ may be used uninitialized [-Wmaybe-uninitialized]
  375 |             values[2] = interp[2];
      |             ~~~~~~~~~~^~~~~~~~~~~
map_colours_to_sphere.c: In function ‘main’:
map_colours_to_sphere.c:282:36: note: ‘interp[2]’ was declared here
  282 |     Real     coefs[8], best_value, interp[4], value;
      |                                    ^~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o mask_volume.o mask_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o match_tags.o match_tags.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
match_tags.c:21:13: warning: ‘rcsid’ defined but not used [-Wunused-variable]
   21 | static char rcsid[]="$Header: /private-cvsroot/libraries/conglomerate/match_tags.c,v 1.1 2004-04-07 15:53:20 bert Exp $";
      |             ^~~~~
match_tags.c: In function ‘main’:
match_tags.c:165:26: warning: ‘near_tag’ may be used uninitialized [-Wmaybe-uninitialized]
  165 |          this_tag = tags2[near_tag];
      |                          ^
match_tags.c:87:34: note: ‘near_tag’ was declared here
   87 |    int ipoint1, ipoint2, icoord, near_tag;
      |                                  ^~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o marching_cubes.o marching_cubes.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
marching_cubes.c: In function ‘get_point_index’:
marching_cubes.c:447:20: warning: variable ‘point_class’ set but not used [-Wunused-but-set-variable=]
  447 |     Point_classes  point_class;
      |                    ^~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o minctotag.o minctotag.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
minctotag.c: In function ‘main’:
minctotag.c:83:37: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
   83 |                 if( min_id > max_id && value != 0.0 ||
      |                     ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o mincmask.o mincmask.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o minc_to_rgb.o minc_to_rgb.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o place_images.o place_images.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o normalize_pet.o normalize_pet.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o plane_polygon_intersect.o plane_polygon_intersect.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o preprocess_segmentation.o preprocess_segmentation.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_2d_coords.o print_2d_coords.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
print_2d_coords.c: In function ‘main’:
print_2d_coords.c:11:41: warning: variable ‘poly’ set but not used [-Wunused-but-set-variable=]
   11 |     int                  n_src_objects, poly;
      |                                         ^~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
g++ -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -c -o mincdefrag.o mincdefrag.cc
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
mincdefrag.cc: In function ‘int clean_color(int*, short int*, short int, short int, int)’:
mincdefrag.cc:22:13: warning: unused variable ‘changed’ [-Wunused-variable]
   22 |     int     changed, num_color, n_voxels;
      |             ^~~~~~~
mincdefrag.cc:23:13: warning: unused variable ‘old_im1’ [-Wunused-variable]
   23 |     short * old_im1, * old_i, * old_ip1;
      |             ^~~~~~~
mincdefrag.cc:23:24: warning: unused variable ‘old_i’ [-Wunused-variable]
   23 |     short * old_im1, * old_i, * old_ip1;
      |                        ^~~~~
mincdefrag.cc:23:33: warning: unused variable ‘old_ip1’ [-Wunused-variable]
   23 |     short * old_im1, * old_i, * old_ip1;
      |                                 ^~~~~~~
mincdefrag.cc: In function ‘int extract_color(int*, short int, short int, int, VIO_Volume)’:
mincdefrag.cc:159:12: warning: unused variable ‘i’ [-Wunused-variable]
  159 |     int    i, j, k, ii;
      |            ^
mincdefrag.cc:159:15: warning: unused variable ‘j’ [-Wunused-variable]
  159 |     int    i, j, k, ii;
      |               ^
mincdefrag.cc:159:18: warning: unused variable ‘k’ [-Wunused-variable]
  159 |     int    i, j, k, ii;
      |                  ^
mincdefrag.cc:159:21: warning: unused variable ‘ii’ [-Wunused-variable]
  159 |     int    i, j, k, ii;
      |                     ^~
mincdefrag.cc:165:11: warning: unused variable ‘nodes’ [-Wunused-variable]
  165 |     int * nodes = NULL;
      |           ^~~~~
mincdefrag.cc:167:13: warning: unused variable ‘old_im1’ [-Wunused-variable]
  167 |     short * old_im1, * old_i, * old_ip1;
      |             ^~~~~~~
mincdefrag.cc:167:24: warning: unused variable ‘old_i’ [-Wunused-variable]
  167 |     short * old_im1, * old_i, * old_ip1;
      |                        ^~~~~
mincdefrag.cc:167:33: warning: unused variable ‘old_ip1’ [-Wunused-variable]
  167 |     short * old_im1, * old_i, * old_ip1;
      |                                 ^~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_all_labels.o print_all_labels.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_axis_angles.o print_axis_angles.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_volume_value.o print_volume_value.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_all_label_bounding_boxes.o print_all_label_bounding_boxes.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
g++ -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -c -o mincskel.o mincskel.cc
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
mincskel.cc: In function ‘int skel(int*, VIO_Volume)’:
mincskel.cc:175:12: warning: unused variable ‘i’ [-Wunused-variable]
  175 |     int    i, j, k, ii;
      |            ^
mincskel.cc:175:15: warning: unused variable ‘j’ [-Wunused-variable]
  175 |     int    i, j, k, ii;
      |               ^
mincskel.cc:175:18: warning: unused variable ‘k’ [-Wunused-variable]
  175 |     int    i, j, k, ii;
      |                  ^
mincskel.cc:175:21: warning: unused variable ‘ii’ [-Wunused-variable]
  175 |     int    i, j, k, ii;
      |                     ^~
mincskel.cc:181:11: warning: unused variable ‘nodes’ [-Wunused-variable]
  181 |     int * nodes = NULL;
      |           ^~~~~
mincskel.cc:183:13: warning: unused variable ‘old_im1’ [-Wunused-variable]
  183 |     short * old_im1, * old_i, * old_ip1;
      |             ^~~~~~~
mincskel.cc:183:24: warning: unused variable ‘old_i’ [-Wunused-variable]
  183 |     short * old_im1, * old_i, * old_ip1;
      |                        ^~~~~
mincskel.cc:183:33: warning: unused variable ‘old_ip1’ [-Wunused-variable]
  183 |     short * old_im1, * old_i, * old_ip1;
      |                                 ^~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_world_value.o print_world_value.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o reparameterize_line.o reparameterize_line.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_world_values.o print_world_values.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
print_world_values.c: In function ‘main’:
print_world_values.c:120:42: warning: format ‘%[^ 	’ expects argument of type ‘char *’, but argument 3 has type ‘char (*)[255]’ [-Wformat=]
  120 |                 if(fscanf(glimfile, "%[^ \t] %*[^\n] %*1[\n]", &cur_minc) > 0) {
      |                                      ~~~~^~                    ~~~~~~~~~
      |                                          |                     |
      |                                          char *                char (*)[255]
print_world_values.c:52:23: warning: unused variable ‘r’ [-Wunused-variable]
   52 |         int        i, r, keep_looping, n_coords;
      |                       ^
In file included from /usr/include/stdio.h:974,
                 from /usr/include/libminc/volume_io/basic.h:34,
                 from /usr/include/libminc/volume_io.h:40:
In function ‘printf’,
    inlined from ‘main’ at print_world_values.c:137:5:
/usr/include/bits/stdio2.h:118:10: warning: ‘voxx’ may be used uninitialized [-Wmaybe-uninitialized]
  118 |   return __printf_chk (__USE_FORTIFY_LEVEL - 1, __fmt, __va_arg_pack ());
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
print_world_values.c: In function ‘main’:
print_world_values.c:50:20: note: ‘voxx’ was declared here
   50 |         int        voxx, voxy, voxz, sizes[MAX_DIMENSIONS];
      |                    ^~~~
In function ‘printf’,
    inlined from ‘main’ at print_world_values.c:137:5:
/usr/include/bits/stdio2.h:118:10: warning: ‘voxy’ may be used uninitialized [-Wmaybe-uninitialized]
  118 |   return __printf_chk (__USE_FORTIFY_LEVEL - 1, __fmt, __va_arg_pack ());
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
print_world_values.c: In function ‘main’:
print_world_values.c:50:26: note: ‘voxy’ was declared here
   50 |         int        voxx, voxy, voxz, sizes[MAX_DIMENSIONS];
      |                          ^~~~
In function ‘printf’,
    inlined from ‘main’ at print_world_values.c:137:5:
/usr/include/bits/stdio2.h:118:10: warning: ‘voxz’ may be used uninitialized [-Wmaybe-uninitialized]
  118 |   return __printf_chk (__USE_FORTIFY_LEVEL - 1, __fmt, __va_arg_pack ());
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
print_world_values.c: In function ‘main’:
print_world_values.c:50:32: note: ‘voxz’ was declared here
   50 |         int        voxx, voxy, voxz, sizes[MAX_DIMENSIONS];
      |                                ^~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o random_warp.o random_warp.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o rgb_to_minc.o rgb_to_minc.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o scale_minc_image.o scale_minc_image.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o scan_object_to_volume.o scan_object_to_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o segment_probabilities.o segment_probabilities.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o spherical_resample.o spherical_resample.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
spherical_resample.c: In function ‘main’:
spherical_resample.c:134:48: warning: ‘in_values’ may be used uninitialized [-Wmaybe-uninitialized]
  134 |                 value += weights[i] * in_values[surface->indices[
      |                                                ^
spherical_resample.c:16:40: note: ‘in_values’ was declared here
   16 |     Real                 dist, value, *in_values;
      |                                        ^~~~~~~~~
spherical_resample.c:140:17: warning: ‘value’ may be used uninitialized [-Wmaybe-uninitialized]
  140 |             if( output_real( out_file, value ) != OK ||
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
spherical_resample.c:16:32: note: ‘value’ was declared here
   16 |     Real                 dist, value, *in_values;
      |                                ^~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o stats_tag_file.o stats_tag_file.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
stats_tag_file.c: In function ‘get_stats_for_one_file’:
stats_tag_file.c:100:66: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  100 |                  (Real) Point_y(marker->position) >= y_min_range &&
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
  101 |                  (Real) Point_y(marker->position) <= y_max_range ) )
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o scan_lines_to_polygons.o scan_lines_to_polygons.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o subsample_volume.o subsample_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o surface_mask.o surface_mask.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o tag_volume.o tag_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o tagtominc.o tagtominc.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o trimesh_resample.o trimesh_resample.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o surface_mask2.o surface_mask2.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
surface_mask2.c: In function ‘binary_object_mask’:
surface_mask2.c:45:42: warning: variable ‘max_real_value’ set but not used [-Wunused-but-set-variable=]
   45 |     Real                 min_real_value, max_real_value;
      |                                          ^~~~~~~~~~~~~~
surface_mask2.c:45:26: warning: variable ‘min_real_value’ set but not used [-Wunused-but-set-variable=]
   45 |     Real                 min_real_value, max_real_value;
      |                          ^~~~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o threshold_volume.o threshold_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o trimesh_set_points.o trimesh_set_points.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o trimesh_to_polygons.o trimesh_to_polygons.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o tags_to_spheres.o tags_to_spheres.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o transform_volume.o transform_volume.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o transform_tags.o transform_tags.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o transform_objects.o transform_objects.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o volume_object_evaluate.o volume_object_evaluate.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o two_surface_resample.o two_surface_resample.c
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
two_surface_resample.c: In function ‘main’:
two_surface_resample.c:140:48: warning: ‘in_values’ may be used uninitialized [-Wmaybe-uninitialized]
  140 |                 value += weights[i] * in_values[surface->indices[
      |                                                ^
two_surface_resample.c:17:40: note: ‘in_values’ was declared here
   17 |     Real                 dist, value, *in_values;
      |                                        ^~~~~~~~~
two_surface_resample.c:146:17: warning: ‘value’ may be used uninitialized [-Wmaybe-uninitialized]
  146 |             if( output_real( out_file, value ) != OK ||
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
two_surface_resample.c:17:32: note: ‘value’ was declared here
   17 |     Real                 dist, value, *in_values;
      |                                ^~~~~
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
gcc -DHAVE_CONFIG_H -I.   -I/usr/include  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o tri_mesh.o tri_mesh.c
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
In file included from /usr/include/libminc/volume_io.h:47,
                 from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27,
                 from <command-line>:
/usr/include/libminc/volume_io/volume.h:66:9: warning: ‘MI_ORIGINAL_TYPE’ redefined
   66 | #define MI_ORIGINAL_TYPE 0
      |         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:26:
/usr/include/libminc/minc.h:194:9: note: this is the location of the previous definition
  194 | #define MI_ORIGINAL_TYPE ((nc_type) 0)
      |         ^~~~~~~~~~~~~~~~
/usr/include/libminc/volume_io/volume.h:68:9: warning: ‘MAX_VAR_DIMS’ redefined
   68 | #define MAX_VAR_DIMS       100
      |         ^~~~~~~~~~~~
In file included from /usr/include/libminc/minc.h:174:
/usr/include/netcdf.h:1960:9: note: this is the location of the previous definition
 1960 | #define MAX_VAR_DIMS    NC_MAX_VAR_DIMS
      |         ^~~~~~~~~~~~
tri_mesh.c: In function ‘coalesce_on_node_values’:
tri_mesh.c:970:39: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses]
  970 |                 if( min_size_sq > 0.0 && size < min_size_sq ||
      |                     ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
/bin/sh ./libtool  --tag=CC   --mode=link gcc  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes   -L/usr/lib -o add_labels add_labels.o minc_labels.o  -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o box_filter_volume box_filter_volume.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o compute_bounding_view compute_bounding_view.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dim_image dim_image.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dilate_volume_completely dilate_volume_completely.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dump_transform dump_transform.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dump_rms dump_rms.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dump_uv dump_uv.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o evaluate evaluate.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o extract_largest_line extract_largest_line.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_image_bounding_box find_image_bounding_box.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_peaks find_peaks.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_volume_centroid find_volume_centroid.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o fit_curve fit_curve.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o fit_curve2 fit_curve2.o conjugate_min.o conjugate_grad.o line_minimization.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flatten_polygons flatten_polygons.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_surface_distances find_surface_distances.o search_utils.o find_in_direction.o model_objects.o intersect_voxel.o deform_line.o models.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_slice make_slice.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o mask_values mask_values.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o minc_to_rgb minc_to_rgb.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o place_images place_images.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o normalize_pet normalize_pet.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o plane_polygon_intersect plane_polygon_intersect.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o preprocess_segmentation preprocess_segmentation.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_2d_coords print_2d_coords.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_world_value print_world_value.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o reparameterize_line reparameterize_line.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o scale_minc_image scale_minc_image.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o scan_object_to_volume scan_object_to_volume.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o scan_lines_to_polygons scan_lines_to_polygons.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o trimesh_resample trimesh_resample.o tri_mesh.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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/bin/sh ./libtool  --tag=CC   --mode=link gcc  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes   -L/usr/lib -o transform_volume transform_volume.o  -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o transform_volume transform_volume.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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/bin/sh ./libtool  --tag=CC   --mode=link gcc  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes   -L/usr/lib -o transform_tags transform_tags.o  -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o transform_tags transform_tags.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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/bin/sh ./libtool  --tag=CC   --mode=link gcc  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes   -L/usr/lib -o transform_objects transform_objects.o  -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o transform_objects transform_objects.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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/bin/sh ./libtool  --tag=CC   --mode=link gcc  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes   -L/usr/lib -o two_surface_resample two_surface_resample.o  -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o two_surface_resample two_surface_resample.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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/bin/sh ./libtool  --tag=CC   --mode=link gcc  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc     -Wno-error=implicit-function-declaration -Wno-error=implicit-int     -Wno-error=incompatible-pointer-types -Wno-error=int-conversion     -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS  -Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes   -L/usr/lib -o volume_object_evaluate volume_object_evaluate.o  -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o volume_object_evaluate volume_object_evaluate.o  -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm
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+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.HCfk80
+ umask 022
+ cd /builddir/build/BUILD/conglomerate-1.6.80-build
+ '[' /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT '!=' / ']'
+ rm -rf /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT
++ dirname /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT
+ mkdir -p /builddir/build/BUILD/conglomerate-1.6.80-build
+ mkdir /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b
+ /usr/bin/make install DESTDIR=/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT 'INSTALL=/usr/bin/install -p'
make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
 /usr/bin/mkdir -p '/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin'
  /bin/sh ./libtool   --mode=install /usr/bin/install -p add_labels apply_sphere_transform autocrop_volume average_voxels blur_surface box_filter_volume box_filter_volume_nd chamfer_volume chop_tags clamp_volume classify_sulcus clean_surface_labels clip_tags close_surface cluster_volume coalesce_lines compare_left_right compare_left_right_groups compare_lengths composite_images composite_minc_images composite_volumes compute_bounding_view compute_resels concat_images contour_slice convex_hull count_thresholded_volume create_2d_sheet create_2d_surface create_box create_four_volumes create_label_map create_landmark_full_volume create_mahalanobis create_surface_interpolation_lsq create_warping_points diff_mahalanobis dilate_volume dilate_volume_completely dim_image dump_deformation_distances dump_points_to_tag_file dump_rms dump_transform dump_uv evaluate extract_tag_slice extract_largest_line fill_sulci find_buried_surface find_image_bounding_box find_peaks find_surface_distances find_tag_outliers find_vertex find_volume_centroid fit_curve fit_curve2 fit_3d flatten_polygons flatten_sheet flatten_sheet3 flatten_to_sphere flatten_to_sphere2 flip_tags flip_volume f_prob gaussian_blur_peaks get_tic group_diff histogram_volume intensity_statistics interpolate_tags label_sulci labels_to_rgb lookup_labels make_diff_volume make_geodesic_volume make_gradient_volume make_grid_lines make_line_links make_slice make_surface_bitlist make_sphere_transform map_colours_to_sphere map_surface_to_sheet map_sheets marching_cubes mask_values mask_volume match_tags mincdefrag mincmask mincskel minctotag minc_to_rgb normalize_pet place_images plane_polygon_intersect preprocess_segmentation print_2d_coords print_all_labels print_all_label_bounding_boxes print_axis_angles print_volume_value print_world_value print_world_values random_warp reparameterize_line rgb_to_minc scale_minc_image scan_lines_to_polygons scan_object_to_volume segment_probabilities spherical_resample stats_tag_file subsample_volume surface_mask surface_mask2 tag_volume tagtominc threshold_volume trimesh_resample trimesh_set_points trimesh_to_polygons tags_to_spheres transform_volume transform_tags transform_objects two_surface_resample volume_object_evaluate '/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin'
libtool: install: /usr/bin/install -p add_labels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/add_labels
libtool: install: /usr/bin/install -p apply_sphere_transform /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/apply_sphere_transform
libtool: install: /usr/bin/install -p autocrop_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/autocrop_volume
libtool: install: /usr/bin/install -p average_voxels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/average_voxels
libtool: install: /usr/bin/install -p blur_surface /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/blur_surface
libtool: install: /usr/bin/install -p box_filter_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/box_filter_volume
libtool: install: /usr/bin/install -p box_filter_volume_nd /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/box_filter_volume_nd
libtool: install: /usr/bin/install -p chamfer_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/chamfer_volume
libtool: install: /usr/bin/install -p chop_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/chop_tags
libtool: install: /usr/bin/install -p clamp_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clamp_volume
libtool: install: /usr/bin/install -p classify_sulcus /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/classify_sulcus
libtool: install: /usr/bin/install -p clean_surface_labels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clean_surface_labels
libtool: install: /usr/bin/install -p clip_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clip_tags
libtool: install: /usr/bin/install -p close_surface /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/close_surface
libtool: install: /usr/bin/install -p cluster_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/cluster_volume
libtool: install: /usr/bin/install -p coalesce_lines /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/coalesce_lines
libtool: install: /usr/bin/install -p compare_left_right /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_left_right
libtool: install: /usr/bin/install -p compare_left_right_groups /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_left_right_groups
libtool: install: /usr/bin/install -p compare_lengths /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_lengths
libtool: install: /usr/bin/install -p composite_images /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_images
libtool: install: /usr/bin/install -p composite_minc_images /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_minc_images
libtool: install: /usr/bin/install -p composite_volumes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_volumes
libtool: install: /usr/bin/install -p compute_bounding_view /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_bounding_view
libtool: install: /usr/bin/install -p compute_resels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_resels
libtool: install: /usr/bin/install -p concat_images /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/concat_images
libtool: install: /usr/bin/install -p contour_slice /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/contour_slice
libtool: install: /usr/bin/install -p convex_hull /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/convex_hull
libtool: install: /usr/bin/install -p count_thresholded_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/count_thresholded_volume
libtool: install: /usr/bin/install -p create_2d_sheet /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_2d_sheet
libtool: install: /usr/bin/install -p create_2d_surface /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_2d_surface
libtool: install: /usr/bin/install -p create_box /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_box
libtool: install: /usr/bin/install -p create_four_volumes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_four_volumes
libtool: install: /usr/bin/install -p create_label_map /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_label_map
libtool: install: /usr/bin/install -p create_landmark_full_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_landmark_full_volume
libtool: install: /usr/bin/install -p create_mahalanobis /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_mahalanobis
libtool: install: /usr/bin/install -p create_surface_interpolation_lsq /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_surface_interpolation_lsq
libtool: install: /usr/bin/install -p create_warping_points /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_warping_points
libtool: install: /usr/bin/install -p diff_mahalanobis /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/diff_mahalanobis
libtool: install: /usr/bin/install -p dilate_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dilate_volume
libtool: install: /usr/bin/install -p dilate_volume_completely /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dilate_volume_completely
libtool: install: /usr/bin/install -p dim_image /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dim_image
libtool: install: /usr/bin/install -p dump_deformation_distances /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_deformation_distances
libtool: install: /usr/bin/install -p dump_points_to_tag_file /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_points_to_tag_file
libtool: install: /usr/bin/install -p dump_rms /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_rms
libtool: install: /usr/bin/install -p dump_transform /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_transform
libtool: install: /usr/bin/install -p dump_uv /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_uv
libtool: install: /usr/bin/install -p evaluate /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/evaluate
libtool: install: /usr/bin/install -p extract_tag_slice /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/extract_tag_slice
libtool: install: /usr/bin/install -p extract_largest_line /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/extract_largest_line
libtool: install: /usr/bin/install -p fill_sulci /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fill_sulci
libtool: install: /usr/bin/install -p find_buried_surface /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_buried_surface
libtool: install: /usr/bin/install -p find_image_bounding_box /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_image_bounding_box
libtool: install: /usr/bin/install -p find_peaks /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_peaks
libtool: install: /usr/bin/install -p find_surface_distances /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_surface_distances
libtool: install: /usr/bin/install -p find_tag_outliers /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_tag_outliers
libtool: install: /usr/bin/install -p find_vertex /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_vertex
libtool: install: /usr/bin/install -p find_volume_centroid /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_volume_centroid
libtool: install: /usr/bin/install -p fit_curve /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_curve
libtool: install: /usr/bin/install -p fit_curve2 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_curve2
libtool: install: /usr/bin/install -p fit_3d /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_3d
libtool: install: /usr/bin/install -p flatten_polygons /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_polygons
libtool: install: /usr/bin/install -p flatten_sheet /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_sheet
libtool: install: /usr/bin/install -p flatten_sheet3 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_sheet3
libtool: install: /usr/bin/install -p flatten_to_sphere /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_to_sphere
libtool: install: /usr/bin/install -p flatten_to_sphere2 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_to_sphere2
libtool: install: /usr/bin/install -p flip_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flip_tags
libtool: install: /usr/bin/install -p flip_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flip_volume
libtool: install: /usr/bin/install -p f_prob /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/f_prob
libtool: install: /usr/bin/install -p gaussian_blur_peaks /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/gaussian_blur_peaks
libtool: install: /usr/bin/install -p get_tic /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/get_tic
libtool: install: /usr/bin/install -p group_diff /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/group_diff
libtool: install: /usr/bin/install -p histogram_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/histogram_volume
libtool: install: /usr/bin/install -p intensity_statistics /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/intensity_statistics
libtool: install: /usr/bin/install -p interpolate_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/interpolate_tags
libtool: install: /usr/bin/install -p label_sulci /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/label_sulci
libtool: install: /usr/bin/install -p labels_to_rgb /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/labels_to_rgb
libtool: install: /usr/bin/install -p lookup_labels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/lookup_labels
libtool: install: /usr/bin/install -p make_diff_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_diff_volume
libtool: install: /usr/bin/install -p make_geodesic_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_geodesic_volume
libtool: install: /usr/bin/install -p make_gradient_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_gradient_volume
libtool: install: /usr/bin/install -p make_grid_lines /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_grid_lines
libtool: install: /usr/bin/install -p make_line_links /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_line_links
libtool: install: /usr/bin/install -p make_slice /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_slice
libtool: install: /usr/bin/install -p make_surface_bitlist /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_surface_bitlist
libtool: install: /usr/bin/install -p make_sphere_transform /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_sphere_transform
libtool: install: /usr/bin/install -p map_colours_to_sphere /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_colours_to_sphere
libtool: install: /usr/bin/install -p map_surface_to_sheet /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_surface_to_sheet
libtool: install: /usr/bin/install -p map_sheets /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_sheets
libtool: install: /usr/bin/install -p marching_cubes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/marching_cubes
libtool: install: /usr/bin/install -p mask_values /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mask_values
libtool: install: /usr/bin/install -p mask_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mask_volume
libtool: install: /usr/bin/install -p match_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/match_tags
libtool: install: /usr/bin/install -p mincdefrag /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincdefrag
libtool: install: /usr/bin/install -p mincmask /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincmask
libtool: install: /usr/bin/install -p mincskel /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincskel
libtool: install: /usr/bin/install -p minctotag /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/minctotag
libtool: install: /usr/bin/install -p minc_to_rgb /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/minc_to_rgb
libtool: install: /usr/bin/install -p normalize_pet /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/normalize_pet
libtool: install: /usr/bin/install -p place_images /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/place_images
libtool: install: /usr/bin/install -p plane_polygon_intersect /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/plane_polygon_intersect
libtool: install: /usr/bin/install -p preprocess_segmentation /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/preprocess_segmentation
libtool: install: /usr/bin/install -p print_2d_coords /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_2d_coords
libtool: install: /usr/bin/install -p print_all_labels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_all_labels
libtool: install: /usr/bin/install -p print_all_label_bounding_boxes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_all_label_bounding_boxes
libtool: install: /usr/bin/install -p print_axis_angles /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_axis_angles
libtool: install: /usr/bin/install -p print_volume_value /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_volume_value
libtool: install: /usr/bin/install -p print_world_value /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_world_value
libtool: install: /usr/bin/install -p print_world_values /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_world_values
libtool: install: /usr/bin/install -p random_warp /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/random_warp
libtool: install: /usr/bin/install -p reparameterize_line /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/reparameterize_line
libtool: install: /usr/bin/install -p rgb_to_minc /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/rgb_to_minc
libtool: install: /usr/bin/install -p scale_minc_image /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scale_minc_image
libtool: install: /usr/bin/install -p scan_lines_to_polygons /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scan_lines_to_polygons
libtool: install: /usr/bin/install -p scan_object_to_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scan_object_to_volume
libtool: install: /usr/bin/install -p segment_probabilities /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/segment_probabilities
libtool: install: /usr/bin/install -p spherical_resample /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/spherical_resample
libtool: install: /usr/bin/install -p stats_tag_file /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/stats_tag_file
libtool: install: /usr/bin/install -p subsample_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/subsample_volume
libtool: install: /usr/bin/install -p surface_mask /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/surface_mask
libtool: install: /usr/bin/install -p surface_mask2 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/surface_mask2
libtool: install: /usr/bin/install -p tag_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tag_volume
libtool: install: /usr/bin/install -p tagtominc /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tagtominc
libtool: install: /usr/bin/install -p threshold_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/threshold_volume
libtool: install: /usr/bin/install -p trimesh_resample /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_resample
libtool: install: /usr/bin/install -p trimesh_set_points /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_set_points
libtool: install: /usr/bin/install -p trimesh_to_polygons /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_to_polygons
libtool: install: /usr/bin/install -p tags_to_spheres /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tags_to_spheres
libtool: install: /usr/bin/install -p transform_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_volume
libtool: install: /usr/bin/install -p transform_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_tags
libtool: install: /usr/bin/install -p transform_objects /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_objects
libtool: install: /usr/bin/install -p two_surface_resample /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/two_surface_resample
libtool: install: /usr/bin/install -p volume_object_evaluate /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/volume_object_evaluate
 /usr/bin/mkdir -p '/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin'
 /usr/bin/install -p nlfit_smr mritotal_suppress smooth_mask compute_icbm_vols multispectral_stx_registration sphere_resample_obj suppress_fat regional_thickness remap_to_lobes '/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin'
make[1]: Nothing to be done for 'install-data-am'.
make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b'
+ find /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT -name '*.la' -delete
+ /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 1.6.80-1.20120308git166303d.fc44 --unique-debug-suffix -1.6.80-1.20120308git166303d.fc44.x86_64 --unique-debug-src-base conglomerate-1.6.80-1.20120308git166303d.fc44.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 --remove-section .gnu.build.attributes -S debugsourcefiles.list /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b
find-debuginfo: starting
Extracting debug info from 132 files
DWARF-compressing 132 files
sepdebugcrcfix: Updated 132 CRC32s, 0 CRC32s did match.
Creating .debug symlinks for symlinks to ELF files
Copying sources found by 'debugedit -l' to /usr/src/debug/conglomerate-1.6.80-1.20120308git166303d.fc44.x86_64
find-debuginfo: done
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ COMPRESS='gzip -9 -n'
+ COMPRESS_EXT=.gz
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
mangling shebang in /usr/bin/remap_to_lobes from /usr/bin/env perl to #!/usr/bin/perl
mangling shebang in /usr/bin/regional_thickness from /usr/bin/env perl to #!/usr/bin/perl
mangling shebang in /usr/bin/suppress_fat from /usr/bin/env perl to #!/usr/bin/perl
mangling shebang in /usr/bin/sphere_resample_obj from /usr/bin/env perl to #!/usr/bin/perl
mangling shebang in /usr/bin/multispectral_stx_registration from /usr/bin/env perl to #!/usr/bin/perl
mangling shebang in /usr/bin/compute_icbm_vols from /usr/bin/env perl to #!/usr/bin/perl
mangling shebang in /usr/bin/smooth_mask from /usr/bin/env perl to #!/usr/bin/perl
mangling shebang in /usr/bin/mritotal_suppress from /usr/bin/env perl to #!/usr/bin/perl
mangling shebang in /usr/bin/nlfit_smr from /usr/bin/env perl to #!/usr/bin/perl
+ /usr/lib/rpm/brp-remove-la-files
+ /usr/lib/rpm/redhat/brp-python-rpm-in-distinfo
+ env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4
+ /usr/lib/rpm/redhat/brp-python-hardlink
+ /usr/bin/add-det --brp -j4 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT
Scanned 11 directories and 428 files,
    processed 0 inodes,
    0 modified (0 replaced + 0 rewritten),
    0 unsupported format, 0 errors
+ /usr/bin/linkdupes --brp /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr
Scanned 10 directories and 428 files,
    considered 428 files, read 112 files, linked 0 files, 0 errors
    sum of sizes of linked files: 0 bytes
Reading /builddir/build/BUILD/conglomerate-1.6.80-build/SPECPARTS/rpm-debuginfo.specpart
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.BzbUKw
+ umask 022
+ cd /builddir/build/BUILD/conglomerate-1.6.80-build
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer  '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules  '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes  '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b
++ ls -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin
++ wc -l
+ n=141
141 programs installed
+ test 141 -eq 141
+ echo '141 programs installed'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/add_labels
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/apply_sphere_transform
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/autocrop_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/average_voxels
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ grep -q '^#!.*perl'
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/blur_surface
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/box_filter_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/box_filter_volume_nd
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/chamfer_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/chop_tags
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clamp_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/classify_sulcus
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clean_surface_labels
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clip_tags
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/close_surface
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/cluster_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/coalesce_lines
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_left_right
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_left_right_groups
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_lengths
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_images
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_minc_images
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_volumes
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_bounding_view
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_icbm_vols
+ grep -q '^#!.*perl'
+ /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_icbm_vols
/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_icbm_vols syntax OK
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_resels
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/concat_images
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/contour_slice
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/convex_hull
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/count_thresholded_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_2d_sheet
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_2d_surface
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_box
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_four_volumes
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_label_map
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_landmark_full_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_mahalanobis
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_surface_interpolation_lsq
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_warping_points
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ grep -q '^#!.*perl'
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/diff_mahalanobis
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dilate_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dilate_volume_completely
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dim_image
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_deformation_distances
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_points_to_tag_file
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_rms
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_transform
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_uv
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/evaluate
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/extract_largest_line
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/extract_tag_slice
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/f_prob
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fill_sulci
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ grep -q '^#!.*perl'
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_buried_surface
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_image_bounding_box
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_peaks
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_surface_distances
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_tag_outliers
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_vertex
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_volume_centroid
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_3d
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_curve
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_curve2
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_polygons
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_sheet
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_sheet3
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_to_sphere
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_to_sphere2
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flip_tags
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flip_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/gaussian_blur_peaks
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/get_tic
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/group_diff
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/histogram_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/intensity_statistics
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/interpolate_tags
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/label_sulci
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ grep -q '^#!.*perl'
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/labels_to_rgb
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/lookup_labels
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_diff_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_geodesic_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_gradient_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_grid_lines
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_line_links
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_slice
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_sphere_transform
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_surface_bitlist
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_colours_to_sphere
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_sheets
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_surface_to_sheet
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/marching_cubes
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mask_values
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mask_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/match_tags
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/minc_to_rgb
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincdefrag
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincmask
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincskel
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/minctotag
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mritotal_suppress
+ grep -q '^#!.*perl'
+ /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mritotal_suppress
/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mritotal_suppress syntax OK
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/multispectral_stx_registration
+ grep -q '^#!.*perl'
+ /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/multispectral_stx_registration
/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/multispectral_stx_registration syntax OK
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/nlfit_smr
+ grep -q '^#!.*perl'
+ /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/nlfit_smr
/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/nlfit_smr syntax OK
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/normalize_pet
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/place_images
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/plane_polygon_intersect
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/preprocess_segmentation
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_2d_coords
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_all_label_bounding_boxes
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_all_labels
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_axis_angles
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_volume_value
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ grep -q '^#!.*perl'
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_world_value
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_world_values
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/random_warp
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/regional_thickness
+ grep -q '^#!.*perl'
+ /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/regional_thickness
/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/regional_thickness syntax OK
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/remap_to_lobes
+ grep -q '^#!.*perl'
+ /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/remap_to_lobes
/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/remap_to_lobes syntax OK
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/reparameterize_line
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ grep -q '^#!.*perl'
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/rgb_to_minc
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scale_minc_image
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scan_lines_to_polygons
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scan_object_to_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/segment_probabilities
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/smooth_mask
+ grep -q '^#!.*perl'
+ /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/smooth_mask
/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/smooth_mask syntax OK
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/sphere_resample_obj
+ grep -q '^#!.*perl'
+ /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/sphere_resample_obj
/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/sphere_resample_obj syntax OK
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/spherical_resample
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/stats_tag_file
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/subsample_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ grep -q '^#!.*perl'
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/suppress_fat
+ /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/suppress_fat
/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/suppress_fat syntax OK
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/surface_mask
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/surface_mask2
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tag_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tags_to_spheres
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tagtominc
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/threshold_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_objects
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_tags
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_volume
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_resample
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_set_points
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_to_polygons
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/two_surface_resample
+ grep -q '^#!.*perl'
+ for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/*
+ head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/volume_object_evaluate
+ grep -q '^#!.*perl'
+ RPM_EC=0
++ jobs -p
+ exit 0
Processing files: conglomerate-1.6.80-1.20120308git166303d.fc44.x86_64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.XdUgQx
+ umask 022
+ cd /builddir/build/BUILD/conglomerate-1.6.80-build
+ cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b
+ DOCDIR=/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate
+ cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/AUTHORS /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate
+ cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/ChangeLog /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate
+ cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/NEWS /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate
+ cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/README /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate
+ cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/TODO /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.Tdm8wq
+ umask 022
+ cd /builddir/build/BUILD/conglomerate-1.6.80-build
+ cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b
+ LICENSEDIR=/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/licenses/conglomerate
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/licenses/conglomerate
+ cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/COPYING /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/licenses/conglomerate
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: conglomerate = 1.6.80-1.20120308git166303d.fc44 conglomerate(x86-64) = 1.6.80-1.20120308git166303d.fc44
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/perl libbicpl.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.23)(64bit) libm.so.6(GLIBC_2.29)(64bit) libminc2.so.5.2.0()(64bit) libnetcdf.so.22()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH)
Processing files: conglomerate-debugsource-1.6.80-1.20120308git166303d.fc44.x86_64
Provides: conglomerate-debugsource = 1.6.80-1.20120308git166303d.fc44 conglomerate-debugsource(x86-64) = 1.6.80-1.20120308git166303d.fc44
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: conglomerate-debuginfo-1.6.80-1.20120308git166303d.fc44.x86_64
Provides: conglomerate-debuginfo = 1.6.80-1.20120308git166303d.fc44 conglomerate-debuginfo(x86-64) = 1.6.80-1.20120308git166303d.fc44 debuginfo(build-id) = 0043cffb3d52b29626c2931b06e1b4dce9892a3f debuginfo(build-id) = 0568e647797258925b39034866bbd4be04a1b774 debuginfo(build-id) = 05a372848d7c26d88d0c3b48d631c766d711f872 debuginfo(build-id) = 09cfc92cd5ba194f5785b56d5b4d64d2ea53094d debuginfo(build-id) = 10ccc86e34ea2c3cfd3e7ffb2d718f8c24290c57 debuginfo(build-id) = 1123f0aa2768cb7a4fefbb14cdb0396d412cf2bc debuginfo(build-id) = 199fc8619615ab9654a216005135302f2d126236 debuginfo(build-id) = 1a17a65b8963425916b85141ed21765a08e550e5 debuginfo(build-id) = 1a95fb45e03ef6a20bbca369f01d34803462ba85 debuginfo(build-id) = 1b7a93edc1ff59cb0bee90d510ca1ff432861b94 debuginfo(build-id) = 1bd7b837ed575301cd2a2a9497f1904b8311fbc2 debuginfo(build-id) = 1c85ae20bbd6eb3dfc72f97ae9d9c3a28cd70c95 debuginfo(build-id) = 1e2e72d0585a5e52e38d5f66887ccdeaa03b1705 debuginfo(build-id) = 1f765cc6b29d1d52a9e2a95141d5f147f71afc59 debuginfo(build-id) = 207493428ae02a5fc6ae073c77cf08a9580626bc debuginfo(build-id) = 210eb6c4e7a6f982cecd368eb35381a83df0fd60 debuginfo(build-id) = 2352324ee63bc9f6d58db547f3b4553c7dc2db7d debuginfo(build-id) = 260c1a252d1909e9a8c9bfa9377f10fac565d363 debuginfo(build-id) = 26362d7adceaa93bfdcc9289d310ec6c3fde8eaf debuginfo(build-id) = 26bc081afa791380d8f738edb2d1925cf9b5d14b debuginfo(build-id) = 270dd3707366edbf51cdb97b4b6a5c98b6fa711b debuginfo(build-id) = 28351bd78275e615519f9ac00eaee4c2559395c9 debuginfo(build-id) = 2ccf50d0a89a8c0863002a722e804616695cecc9 debuginfo(build-id) = 2e1c91f4180d0212c2f4d045c455dd4f193aaee4 debuginfo(build-id) = 2e493565d929f24a82cb21b48c5b0c8aba1ddd61 debuginfo(build-id) = 2ea9a4ae923f2ee2a99a5121b1608315e7edeb08 debuginfo(build-id) = 2ff2bb8ab241a2ac87e41e20d4d59623d3e5e568 debuginfo(build-id) = 31e61ad080caa6f967f879c6bff477e711922361 debuginfo(build-id) = 3405010e7016da38017dda90f5e533aed73a0532 debuginfo(build-id) = 3613bec4b0c40fc82b44ccecb321522ed530cd18 debuginfo(build-id) = 384e72990106e2786bd1d07fb6f4ec2f93360ad9 debuginfo(build-id) = 392a93576e7b95b9efbd28d8279a8cbdf5a85a81 debuginfo(build-id) = 3976615788eadd00712bb3d4561824072693ba79 debuginfo(build-id) = 39b8d865894c6d7fc0caf9854a1809a7eae7946e debuginfo(build-id) = 3a014da9285bb9fc2d855bc5e98d08c6ee49b42f debuginfo(build-id) = 3d901b5b2beb85171bd26f9b3ec968745398ed7e debuginfo(build-id) = 3e4fb449b5f1b5dfd50ee73f87098c9487df0f27 debuginfo(build-id) = 406da09bce24f8e2b1191f838b0184745acc7bba debuginfo(build-id) = 41a6fe6bc8c9916ac9c59994c401875f57a61ef3 debuginfo(build-id) = 41afcbe0d13a3947941792f1b421cc8dc5e1a13c debuginfo(build-id) = 41e226b9e82b867b326188be3ca721c01fd3398b debuginfo(build-id) = 4468c18023c88b0ca641cc6f5fda3b4267081133 debuginfo(build-id) = 49697aaedc65a3e823d5f4bfb5a9ea2582632465 debuginfo(build-id) = 4d3406d18ae3df3980a19b47768bb2d959c1b581 debuginfo(build-id) = 4d92dd46a5ab2d2c41b0410f4ef59b728cbd5ac0 debuginfo(build-id) = 50fa3e18b01976b366bd54539f156e5cb30ff86c debuginfo(build-id) = 53d1dc6e00880b8300d873db3f602c8b5e3fe547 debuginfo(build-id) = 5528870a66c37415d6f578cdce9092f382f50674 debuginfo(build-id) = 5d09bed7d9db7d7478a3ee146311f35182fabaf0 debuginfo(build-id) = 5f220e8714020f28953295b962bdfb3ccfa075ef debuginfo(build-id) = 649f3646fe788966dd94acd535a6005e8badc248 debuginfo(build-id) = 64c3ac139f758c9c74c34374674aa30021adf42f debuginfo(build-id) = 66c745d8eb6897c79a1ac6efa37cd53efd8410ad debuginfo(build-id) = 66fae6cf9b553f023e0de7f1a380a4b67ca1aad8 debuginfo(build-id) = 676ab8045ea2f0697150a5014c60db072435d816 debuginfo(build-id) = 68ee195dba1a5494841b2fdded68ad46115e9ad0 debuginfo(build-id) = 701108b086e9c4ab0cc929c3d2aba0af1e58eff9 debuginfo(build-id) = 728f98d176d674c73b5497f58e4f691fd5260e2c debuginfo(build-id) = 745a74932f9de4c2cc2bc0f4e00cbde3c7f367c8 debuginfo(build-id) = 759c7c8fa6e3e1044bfafba2eb0c5a40b899020a debuginfo(build-id) = 765c76ec7d3e87d9296525a55f8829e47f961122 debuginfo(build-id) = 7a5d62d77a7a31a575b82f946b7501a67506a12d debuginfo(build-id) = 7d1a0f3dc36d5ab799d4714523bd9e5c5f668c66 debuginfo(build-id) = 7ecbc8f1d249f461d13838b0a18e3c37e8750d86 debuginfo(build-id) = 8037ec2476c8f1ea0e8979d3c07c94c5479d79d1 debuginfo(build-id) = 803fddc6d67aed84cefd33a472b11945c07c075e debuginfo(build-id) = 804682d74eaac2f7065a21a8fc53d42849f2b63a debuginfo(build-id) = 814ba2673b9c60ee592a1759c5b5c652c887fc0d debuginfo(build-id) = 81631036c33a6357522c68a77eca1a290ac0b0bc debuginfo(build-id) = 86254963d917f0c035c57f7666e05dc74138cd4d debuginfo(build-id) = 866bd9130033662d8ce61d54947a959309818ad1 debuginfo(build-id) = 876febd40c645381c8401da8e2c9fce82fd1ddbc debuginfo(build-id) = 8998a08de3dff66fab6e58429a4ab851ee0caf82 debuginfo(build-id) = 8ef378600c91515a8419ff7044ac5ab69095dfa0 debuginfo(build-id) = 8f49c4edb53bc8f3f021d5afca0d203d461b3d2c debuginfo(build-id) = 91e75ecf482c9c9e8d691e7ba6a6e5af15a357a7 debuginfo(build-id) = 9225d5168d84ae50269c931a6931f72a977e295d debuginfo(build-id) = 92f9aa12c4b48a25cdbc75710afb766ffc542a83 debuginfo(build-id) = 95fc9c271f8976366f89a3ff1643cabae357859b debuginfo(build-id) = 97fa7e7413a46e26303cd5087df7281c989c5b86 debuginfo(build-id) = 9b80150b6fc2d1e49109eec0f73369c21ecde73f debuginfo(build-id) = 9e6454ed22944f97a54d51b39af48209c4fa6288 debuginfo(build-id) = a0469b3705599b0762981d1b4d4100153dfc0344 debuginfo(build-id) = a0df053dde2dcae8e09766989ef4b7c4305a64d4 debuginfo(build-id) = a1e0489e8eb50ea50dec0b5c91b8411133fbd8c2 debuginfo(build-id) = a23da0ad58e245270b44d03d8ab3c49a6dd1c94c debuginfo(build-id) = a37d3b1c4f8b4d8683f3be99610ace75229e6bbd debuginfo(build-id) = a5c473830644224752d3fad872bffaad966a4203 debuginfo(build-id) = a640af793ba4cb5f12dc4488940646b4e3d2a718 debuginfo(build-id) = ac5886f9ff460bdfe4a31e2209262d3403bea2bd debuginfo(build-id) = ae89406148ed34707c46b4a861f1876e761fb820 debuginfo(build-id) = af002e7df234f5d613f69554115d5c2a3baf03cf debuginfo(build-id) = af0859f06ecd8ea7f1768483b0fb908cc28bb87b debuginfo(build-id) = aff6299b10a8cbd470902c21cbc6e60fd26725c3 debuginfo(build-id) = b0f3babfec6e19bd78fc61ea16796a24a18ecef4 debuginfo(build-id) = b14f76390ab57f387ae42523cec332e57b0b1226 debuginfo(build-id) = b19603d2efcddc12c6f020084f7de47e24c0c30d debuginfo(build-id) = b415af001a5647736bd62b165fd194912fbf7086 debuginfo(build-id) = b4fdd42acd8f8d68fcddec287a0f52d932e3f172 debuginfo(build-id) = b6687aaeee1ad400494615707cd4c725b188f15e debuginfo(build-id) = b6d125ff999677cef34f377fedf477e4d1280acd debuginfo(build-id) = bc34e44dcc6e24bc0a21ca4c469ec341d36fb1d6 debuginfo(build-id) = bcb43d575032551ca85fe3b85cf97fe11b7ae5c0 debuginfo(build-id) = be76f920926f5f3cea1058bc748da7167ceb5b0b debuginfo(build-id) = c09812c21b1c7fa59b2d5da610bebd3d5a02ed50 debuginfo(build-id) = c3e9d91d1a30e61c8c06770c6769bdcdce6ca7a7 debuginfo(build-id) = c5d3200221b2e7b0e7977d2af98a1c9414a6613f debuginfo(build-id) = d0fe2fc1690a85e64344b8361af399c44f42197d debuginfo(build-id) = d4d106e857de1d08666058ab5bbf9dd0002e1bd5 debuginfo(build-id) = d9115bde47e70456ca7269ccee367f1ebb57bd1b debuginfo(build-id) = d99a4adfbf25be8beef576a538cbf8262009bf11 debuginfo(build-id) = d9a5c0b44b16882f7734f01bfee88138f9f2d175 debuginfo(build-id) = dc109b676107647a3581f51e0e9cacc02a1a9b17 debuginfo(build-id) = dd62e2ec4cbd43f1528f5e54cacd30ccc2b1e9ad debuginfo(build-id) = df0920eca3ecb4bce5f29ee76d2ed16ecacd9f12 debuginfo(build-id) = e151ec50196d5bee41988c87eeb1ade5b51c2d23 debuginfo(build-id) = e1d3dbab33db7ef80b5b2a2383e463075bc2f170 debuginfo(build-id) = e2ab3b284da81cb178237d345d97b52358af1a20 debuginfo(build-id) = e2d1b44af714435d14b8c8c5cd59458bbd77c745 debuginfo(build-id) = ea822c6f5dacb79a28a253f29b7a98ea43514d24 debuginfo(build-id) = ebaff09306ffa9a285bc43a7f056a372ea8dc562 debuginfo(build-id) = ed203e194ac7343effff5f71fade1c4a5232b3e3 debuginfo(build-id) = ede741276c641d699c527e817285b4a3aee6885d debuginfo(build-id) = f4a1acb9de23ef6ba00f3d03d37d2699d5ed2e97 debuginfo(build-id) = f4b6aeabe6af8fae401725a1cd78a09319c91128 debuginfo(build-id) = f789d05be155bd585a1e654bb1781a57ebe0ba10 debuginfo(build-id) = f7b0d66bbb3f04536926b5fd40a6633fa813b2c7 debuginfo(build-id) = fb9cb9f00931a039aae4c0097583be2ec7b99013 debuginfo(build-id) = fc60da955e641fa49a776172a83087a227916c40 debuginfo(build-id) = fd46ab75ff4a338ddab981553bcb3cec6676a385 debuginfo(build-id) = ffde102f890c2a8b6009064963be6d0195cd0e10 debuginfo(build-id) = fff74ac0cc6035687acd24d9bb65452844f091d9
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: conglomerate-debugsource(x86-64) = 1.6.80-1.20120308git166303d.fc44
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT
Wrote: /builddir/build/RPMS/conglomerate-debugsource-1.6.80-1.20120308git166303d.fc44.x86_64.rpm
Wrote: /builddir/build/RPMS/conglomerate-1.6.80-1.20120308git166303d.fc44.x86_64.rpm
Wrote: /builddir/build/RPMS/conglomerate-debuginfo-1.6.80-1.20120308git166303d.fc44.x86_64.rpm
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.Mql5d2
+ umask 022
+ cd /builddir/build/BUILD/conglomerate-1.6.80-build
+ test -d /builddir/build/BUILD/conglomerate-1.6.80-build
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/conglomerate-1.6.80-build
+ rm -rf /builddir/build/BUILD/conglomerate-1.6.80-build
+ RPM_EC=0
++ jobs -p
+ exit 0
Finish: rpmbuild conglomerate-1.6.80-1.20120308git166303d.fc44.src.rpm
Finish: build phase for conglomerate-1.6.80-1.20120308git166303d.fc44.src.rpm
INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-44-x86_64-1790274036.249598/root/var/log/dnf5.log
INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz
/bin/tar: Removing leading `/' from member names
INFO: Done(/var/lib/copr-rpmbuild/results/conglomerate-1.6.80-1.20120308git166303d.fc44.src.rpm) Config(child) 0 minutes 50 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running RPMResults tool
Package info:
{
    "packages": [
        {
            "name": "conglomerate",
            "epoch": null,
            "version": "1.6.80",
            "release": "1.20120308git166303d.fc44",
            "arch": "x86_64"
        },
        {
            "name": "conglomerate",
            "epoch": null,
            "version": "1.6.80",
            "release": "1.20120308git166303d.fc44",
            "arch": "src"
        },
        {
            "name": "conglomerate-debugsource",
            "epoch": null,
            "version": "1.6.80",
            "release": "1.20120308git166303d.fc44",
            "arch": "x86_64"
        },
        {
            "name": "conglomerate-debuginfo",
            "epoch": null,
            "version": "1.6.80",
            "release": "1.20120308git166303d.fc44",
            "arch": "x86_64"
        }
    ]
}
RPMResults finished