Warning: Permanently added '3.215.190.201' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/11031720-fedora-45-x86_64 --chroot fedora-45-x86_64 Version: 1.10 PID: 11876 Logging PID: 11878 Task: {'allow_user_ssh': False, 'appstream': False, 'background': False, 'build_id': 11031720, 'buildroot_pkgs': [], 'chroot': 'fedora-45-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': '3110c9e55c27b8b0faf5e570327a0849e2de3952', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/mhough/neurofedora/conglomerate', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'conglomerate', 'package_version': '1.6.80-1.20120308git166303d', 'project_dirname': 'neurofedora', 'project_name': 'neurofedora', 'project_owner': 'mhough', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/mhough/neurofedora/fedora-45-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None, 'repo_gpgcheck': False}], 'sandbox': 'mhough/neurofedora--mhough', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': 0, 'submitter': 'mhough', 'tags': [], 'task_id': '11031720-fedora-45-x86_64', 'timeout': 86400, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/mhough/neurofedora/conglomerate /var/lib/copr-rpmbuild/workspace/workdir-clxffco_/conglomerate --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/mhough/neurofedora/conglomerate', '/var/lib/copr-rpmbuild/workspace/workdir-clxffco_/conglomerate', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-clxffco_/conglomerate'... Running: git checkout 3110c9e55c27b8b0faf5e570327a0849e2de3952 -- cmd: ['git', 'checkout', '3110c9e55c27b8b0faf5e570327a0849e2de3952', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-clxffco_/conglomerate rc: 0 stdout: stderr: Note: switching to '3110c9e55c27b8b0faf5e570327a0849e2de3952'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 3110c9e automatic import of conglomerate Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-clxffco_/conglomerate rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading conglomerate-166303d.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -H 'Accept-Encoding: identity' -o conglomerate-166303d.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/mhough/neurofedora/conglomerate/conglomerate-166303d.tar.gz/md5/c98960361683829b3f6ca53f3fdd19ae/conglomerate-166303d.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 452.6k 100 452.6k 0 0 23.20M 0 0 INFO: Reading stdout from command: md5sum conglomerate-166303d.tar.gz INFO: Downloading mni-acmacros.tar.gz INFO: Calling: curl -H Pragma: -H 'Accept-Encoding: identity' -o mni-acmacros.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/mhough/neurofedora/conglomerate/mni-acmacros.tar.gz/md5/319aef208dbf53a6eeede74b258d993d/mni-acmacros.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 12464 100 12464 0 0 1.29M 0 0 INFO: Reading stdout from command: md5sum mni-acmacros.tar.gz tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=86400): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-clxffco_/conglomerate/conglomerate.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-clxffco_/conglomerate --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1790274075.697241 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 6.8 starting (python version = 3.14.5, NVR = mock-6.8-1.fc44), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-clxffco_/conglomerate/conglomerate.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-clxffco_/conglomerate --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1790274075.697241 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-clxffco_/conglomerate/conglomerate.spec) Config(fedora-45-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 6.8 INFO: Mock Version: 6.8 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-45-x86_64-bootstrap-1790274075.697241/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using container image: registry.fedoraproject.org/fedora:45 INFO: Pulling image: registry.fedoraproject.org/fedora:45 INFO: Tagging container image as mock-bootstrap-9198182f-ef0a-4f16-a101-97b7461316d7 INFO: Checking that 85fc1df231dc497ac1b8c1e0440b854bf877aa73d9c831b0b840a56ca5162ab2 image matches host's architecture INFO: Copy content of container 85fc1df231dc497ac1b8c1e0440b854bf877aa73d9c831b0b840a56ca5162ab2 to /var/lib/mock/fedora-45-x86_64-bootstrap-1790274075.697241/root INFO: mounting 85fc1df231dc497ac1b8c1e0440b854bf877aa73d9c831b0b840a56ca5162ab2 with podman image mount INFO: image 85fc1df231dc497ac1b8c1e0440b854bf877aa73d9c831b0b840a56ca5162ab2 as /var/lib/containers/storage/overlay/b60b5287b68b5a93281fc912e90ade3866901fb22816699a6792855e1e836c23/merged INFO: umounting image 85fc1df231dc497ac1b8c1e0440b854bf877aa73d9c831b0b840a56ca5162ab2 (/var/lib/containers/storage/overlay/b60b5287b68b5a93281fc912e90ade3866901fb22816699a6792855e1e836c23/merged) with podman image umount INFO: Removing image mock-bootstrap-9198182f-ef0a-4f16-a101-97b7461316d7 INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-45-x86_64-1790274075.697241/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-6.1.0-1.fc45.x86_64 rpm-sequoia-1.10.3-1.fc45.x86_64 dnf5-5.4.5.0-1.fc45.x86_64 dnf5-plugins-5.4.5.0-1.fc45.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: updates 100% | 128.3 KiB/s | 26.7 KiB | 00m00s Copr repository 100% | 1.2 MiB/s | 387.2 KiB | 00m00s fedora 100% | 35.7 MiB/s | 36.6 MiB | 00m01s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash x86_64 0:5.3.15-2.fc45 fedora 8.5 MiB bzip2 x86_64 0:1.0.8-24.fc45 fedora 95.0 KiB coreutils x86_64 0:9.11-6.fc45 fedora 5.9 MiB cpio x86_64 0:2.15-10.fc45 fedora 1.1 MiB diffutils x86_64 0:3.12-6.fc45 fedora 1.6 MiB fedora-release-common noarch 0:45-0.10 fedora 4.2 KiB findutils x86_64 1:4.11.0-2.fc45 fedora 1.9 MiB gawk x86_64 0:5.4.1-1.fc45 fedora 2.2 MiB glibc-minimal-langpack x86_64 0:2.44-1.fc45 fedora 0.0 B grep x86_64 0:3.12-4.fc45 fedora 1.0 MiB gzip x86_64 0:1.14-4.fc45 fedora 401.6 KiB info x86_64 0:7.3-3.fc45 fedora 372.4 KiB patch x86_64 0:2.8-5.fc45 fedora 226.6 KiB redhat-rpm-config noarch 0:345-4.fc45 fedora 184.2 KiB rpm-build x86_64 0:6.1.0-1.fc45 fedora 312.2 KiB sed x86_64 0:4.10-2.fc45 fedora 866.5 KiB shadow-utils x86_64 2:4.20.0-1.fc45 fedora 3.9 MiB tar x86_64 2:1.35-10.fc45 fedora 3.0 MiB unzip x86_64 0:6.0-71.fc45 fedora 441.8 KiB util-linux x86_64 0:2.42.2-3.fc45 fedora 3.7 MiB which x86_64 0:2.25-2.fc45 fedora 83.6 KiB xz x86_64 1:5.8.3-2.fc45 fedora 1.4 MiB Installing dependencies: R-srpm-macros noarch 0:1.3.7-3.fc45 fedora 3.5 KiB add-determinism x86_64 0:0.7.3-3.fc45 fedora 2.2 MiB alternatives x86_64 0:1.33-6.fc45 fedora 62.1 KiB ansible-srpm-macros noarch 0:1-22.fc45 fedora 35.7 KiB audit-libs x86_64 0:4.2.1-2.fc45 fedora 390.5 KiB binutils x86_64 0:2.47-1.fc45 fedora 28.4 MiB build-reproducibility-srpm-macros noarch 0:0.7.3-3.fc45 fedora 1.2 KiB bzip2-libs x86_64 0:1.0.8-24.fc45 fedora 80.5 KiB ca-certificates noarch 0:2026.2.90_v9.0.317-1.fc45 fedora 2.6 MiB cmake-srpm-macros noarch 0:4.3.0-5.fc45 fedora 524.0 B coreutils-common x86_64 0:9.11-6.fc45 fedora 10.9 MiB crypto-policies noarch 0:20260713-2.gitc42da77.fc45 fedora 134.3 KiB curl x86_64 0:8.21.0-5.fc45 fedora 487.9 KiB cyrus-sasl-lib x86_64 0:2.1.28-37.fc45 fedora 2.3 MiB debugedit x86_64 0:5.3-3.fc45 fedora 220.8 KiB dwz x86_64 0:0.17-3.fc45 fedora 291.1 KiB ed x86_64 0:1.22.6-1.fc45 fedora 150.9 KiB efi-srpm-macros noarch 0:6-9.fc45 fedora 40.3 KiB elfutils x86_64 0:0.196-1.fc45 fedora 3.1 MiB elfutils-debuginfod-client x86_64 0:0.196-1.fc45 fedora 79.9 KiB elfutils-libelf x86_64 0:0.196-1.fc45 fedora 1.4 MiB elfutils-libs x86_64 0:0.196-1.fc45 fedora 719.6 KiB erlang-srpm-macros noarch 0:0.3.11-2.fc45 fedora 1.9 KiB fedora-gpg-keys noarch 0:45-0.6 fedora 130.3 KiB fedora-release noarch 0:45-0.10 fedora 0.0 B fedora-release-identity-basic noarch 0:45-0.10 fedora 656.0 B fedora-repos noarch 0:45-0.6 fedora 4.9 KiB file x86_64 0:5.48-3.fc45 fedora 101.9 KiB file-libs x86_64 0:5.48-3.fc45 fedora 12.3 MiB filesystem x86_64 0:3.18-59.fc45 fedora 112.0 B filesystem-srpm-macros noarch 0:3.18-59.fc45 fedora 38.2 KiB fips-provider x86_64 0:1.5.2-3.fc45 fedora 4.8 MiB fonts-srpm-macros noarch 1:5.0.0-4.fc45 fedora 55.8 KiB forge-srpm-macros noarch 0:0.4.0-5.fc45 fedora 38.9 KiB fpc-srpm-macros noarch 0:1.3-17.fc45 fedora 144.0 B gap-srpm-macros noarch 0:2-3.fc45 fedora 2.1 KiB gdb-minimal x86_64 0:17.2-6.fc45 fedora 14.2 MiB gdbm-libs x86_64 1:1.23-12.fc45 fedora 133.7 KiB ghc-srpm-macros noarch 0:1.10-2.fc45 fedora 792.0 B glibc x86_64 0:2.44-1.fc45 fedora 7.1 MiB glibc-common x86_64 0:2.44-1.fc45 fedora 1.0 MiB glibc-gconv-extra x86_64 0:2.44-1.fc45 fedora 7.7 MiB gmp x86_64 1:6.3.0-6.fc45 fedora 815.2 KiB gnat-srpm-macros noarch 0:7-3.fc45 fedora 1.0 KiB gnome-srpm-macros noarch 0:1.0-2.fc45 fedora 3.5 KiB gnulib-l10n noarch 0:20241231-4.fc45 fedora 655.0 KiB gnupg2 x86_64 0:2.4.9-18.fc45 fedora 6.5 MiB gnupg2-dirmngr x86_64 0:2.4.9-18.fc45 fedora 630.1 KiB gnupg2-gpg-agent x86_64 0:2.4.9-18.fc45 fedora 678.8 KiB gnupg2-gpgconf x86_64 0:2.4.9-18.fc45 fedora 253.8 KiB gnupg2-keyboxd x86_64 0:2.4.9-18.fc45 fedora 201.3 KiB gnupg2-verify x86_64 0:2.4.9-18.fc45 fedora 356.3 KiB gnutls x86_64 0:3.8.13-3.fc45 fedora 3.8 MiB go-srpm-macros noarch 0:3.8.0-3.fc45 fedora 61.9 KiB gpgverify noarch 0:2.2-5.fc45 fedora 8.7 KiB ima-evm-utils-libs x86_64 0:1.6.2-12.fc45 fedora 56.6 KiB jansson x86_64 0:2.14-5.fc45 fedora 89.0 KiB java-srpm-macros noarch 0:1-9.fc45 fedora 870.0 B json-c x86_64 0:0.18-9.fc45 fedora 82.7 KiB kernel-srpm-macros noarch 0:1.0-30.fc45 fedora 1.9 KiB keyutils-libs x86_64 0:1.6.3-8.fc45 fedora 54.2 KiB krb5-libs x86_64 0:1.22.2-9.fc45 fedora 2.4 MiB libacl x86_64 0:2.4.0-2.fc45 fedora 43.9 KiB libarchive x86_64 0:3.8.8-3.fc45 fedora 1.0 MiB libassuan x86_64 0:2.5.7-6.fc45 fedora 163.9 KiB libattr x86_64 0:2.6.0-2.fc45 fedora 24.3 KiB libblkid x86_64 0:2.42.2-3.fc45 fedora 282.3 KiB libbrotli x86_64 0:1.2.0-6.fc45 fedora 865.0 KiB libcap x86_64 0:2.78-2.fc45 fedora 208.2 KiB libcap-ng x86_64 0:0.9.6-1.fc45 fedora 68.8 KiB libcbor x86_64 0:0.14.0-3.fc45 fedora 83.5 KiB libcom_err x86_64 0:1.47.4-2.fc45 fedora 63.0 KiB libcurl x86_64 0:8.21.0-5.fc45 fedora 1.1 MiB libeconf x86_64 0:0.7.9-4.fc45 fedora 64.8 KiB libevent x86_64 0:2.1.13-1.fc45 fedora 980.7 KiB libfdisk x86_64 0:2.42.2-3.fc45 fedora 392.2 KiB libffi x86_64 0:3.5.2-3.fc45 fedora 83.7 KiB libfido2 x86_64 0:1.17.0-5.fc45 fedora 256.5 KiB libfsverity x86_64 0:1.7-4.fc45 fedora 24.4 KiB libgcc x86_64 0:16.2.1-2.fc45 fedora 270.7 KiB libgcrypt x86_64 0:1.12.2-2.fc45 fedora 1.7 MiB libgomp x86_64 0:16.2.1-2.fc45 fedora 577.5 KiB libgpg-error x86_64 0:1.61-2.fc45 fedora 953.9 KiB libidn2 x86_64 0:2.3.8-4.fc45 fedora 556.4 KiB libksba x86_64 0:1.8.0-3.fc45 fedora 431.1 KiB liblastlog2 x86_64 0:2.42.2-3.fc45 fedora 37.6 KiB libmount x86_64 0:2.42.2-3.fc45 fedora 404.8 KiB libnghttp2 x86_64 0:1.69.0-5.fc45 fedora 166.2 KiB libnghttp3 x86_64 0:1.18.0-1.fc45 fedora 163.4 KiB libpfm x86_64 0:4.13.0-23.fc45 fedora 1.7 MiB libpkgconf x86_64 0:2.5.1-2.fc45 fedora 90.1 KiB libpsl x86_64 0:0.23.1-1.fc45 fedora 80.4 KiB libselinux x86_64 0:3.11-5.fc45 fedora 205.2 KiB libselinux-utils x86_64 0:3.11-5.fc45 fedora 306.0 KiB libsemanage x86_64 0:3.11-4.fc45 fedora 320.6 KiB libsepol x86_64 0:3.11-2.fc45 fedora 866.1 KiB libsmartcols x86_64 0:2.42.2-3.fc45 fedora 188.5 KiB libssh x86_64 0:0.12.2-1.fc45 fedora 725.7 KiB libssh-config noarch 0:0.12.2-1.fc45 fedora 277.0 B libstdc++ x86_64 0:16.2.1-2.fc45 fedora 3.1 MiB libtasn1 x86_64 0:4.21.0-2.fc45 fedora 176.6 KiB libtool-ltdl x86_64 0:2.5.4-11.fc45 fedora 70.0 KiB libunistring x86_64 0:1.1-12.fc45 fedora 1.7 MiB libusb1 x86_64 0:1.0.30-2.fc45 fedora 180.1 KiB libuuid x86_64 0:2.42.2-3.fc45 fedora 37.2 KiB libverto x86_64 0:0.3.2-13.fc45 fedora 25.3 KiB libxcrypt x86_64 0:4.5.2-4.fc45 fedora 293.2 KiB libxml2 x86_64 0:2.13.9-4.fc45 fedora 1.8 MiB libzstd x86_64 0:1.5.7-6.fc45 fedora 956.1 KiB linkdupes x86_64 0:0.7.3-3.fc45 fedora 782.1 KiB lua-libs x86_64 0:5.5.1-2.fc45 fedora 298.0 KiB lua-srpm-macros noarch 0:1-18.fc45 fedora 1.3 KiB lz4-libs x86_64 0:1.10.0-5.fc45 fedora 165.3 KiB meson-srpm-macros noarch 0:1.12.0-2.fc45 fedora 1.7 KiB mpfr x86_64 0:4.2.2-4.fc45 fedora 849.2 KiB ncurses-base noarch 0:6.6-3.fc45 fedora 329.7 KiB ncurses-libs x86_64 0:6.6-3.fc45 fedora 969.1 KiB nettle x86_64 0:4.0-5.fc45 fedora 801.9 KiB ngtcp2 x86_64 0:1.22.1-3.fc45 fedora 334.3 KiB ngtcp2-crypto-ossl x86_64 0:1.22.1-3.fc45 fedora 51.6 KiB npth x86_64 0:1.8-5.fc45 fedora 49.5 KiB ocaml-srpm-macros noarch 0:11-4.fc45 fedora 1.9 KiB openblas-srpm-macros noarch 0:2-22.fc45 fedora 112.0 B openldap x86_64 0:2.6.14-1.fc45 fedora 678.9 KiB openssl-libs x86_64 1:4.0.2-2.fc45 fedora 6.7 MiB p11-kit x86_64 0:0.26.5-1.fc45 fedora 2.6 MiB p11-kit-trust x86_64 0:0.26.5-1.fc45 fedora 478.4 KiB package-notes-srpm-macros noarch 0:0.20-2.fc45 fedora 1.6 KiB pam-libs x86_64 0:1.7.2-4.fc45 fedora 134.5 KiB pcre2 x86_64 0:10.47-1.fc45.2 fedora 718.5 KiB pcre2-syntax noarch 0:10.47-1.fc45.2 fedora 281.9 KiB perl-srpm-macros noarch 0:1-65.fc45 fedora 861.0 B pkgconf x86_64 0:2.5.1-2.fc45 fedora 92.7 KiB pkgconf-m4 noarch 0:2.5.1-2.fc45 fedora 14.3 KiB pkgconf-pkg-config x86_64 0:2.5.1-2.fc45 fedora 989.0 B policycoreutils x86_64 0:3.11-2.fc45 fedora 892.9 KiB popt x86_64 0:1.19-11.fc45 fedora 136.7 KiB publicsuffix-list-dafsa noarch 0:20260624-2.fc45 fedora 71.3 KiB pyproject-srpm-macros noarch 0:1.23.2-1.fc45 fedora 3.4 KiB python-srpm-macros noarch 0:3.15-2.fc45 fedora 51.6 KiB qt5-srpm-macros noarch 0:5.15.18-3.fc45 fedora 500.0 B qt6-srpm-macros noarch 0:6.11.2-1.fc45 fedora 472.0 B readline x86_64 0:8.3-6.fc45 fedora 515.5 KiB redhat-systemd-presets noarch 0:102-3.fc45 fedora 1.0 KiB redhat-systemd-presets-common noarch 0:102-3.fc45 fedora 16.9 KiB rpm x86_64 0:6.1.0-1.fc45 fedora 3.1 MiB rpm-build-libs x86_64 0:6.1.0-1.fc45 fedora 288.3 KiB rpm-libs x86_64 0:6.1.0-1.fc45 fedora 1.1 MiB rpm-plugin-selinux x86_64 0:6.1.0-1.fc45 fedora 11.9 KiB rpm-sequoia x86_64 0:1.10.3-1.fc45 fedora 2.4 MiB rpm-sign-libs x86_64 0:6.1.0-1.fc45 fedora 39.6 KiB rust-srpm-macros noarch 0:28.5-2.fc45 fedora 5.5 KiB selinux-policy noarch 0:45.19-1.fc45 fedora 32.1 KiB selinux-policy-targeted noarch 0:45.19-1.fc45 fedora 19.0 MiB setup noarch 0:2.15.1-2.fc45 fedora 725.6 KiB sqlite-libs x86_64 0:3.53.4-1.fc45 fedora 1.6 MiB systemd-libs x86_64 0:262-1.fc45 fedora 2.8 MiB systemd-standalone-sysusers x86_64 0:262-1.fc45 fedora 981.3 KiB tpm2-tss x86_64 0:4.2.0-1.fc45 fedora 1.7 MiB tree-sitter-srpm-macros noarch 0:0.4.6-2.fc45 fedora 8.6 KiB util-linux-core x86_64 0:2.42.2-3.fc45 fedora 1.5 MiB xxhash-libs x86_64 0:0.8.3-5.fc45 fedora 94.0 KiB xz-libs x86_64 1:5.8.3-2.fc45 fedora 221.7 KiB zig-srpm-macros noarch 0:1-9.fc45 fedora 1.3 KiB zip x86_64 0:3.0-46.fc45 fedora 694.1 KiB zlib-ng-compat x86_64 0:2.3.3-6.fc45 fedora 165.6 KiB zstd x86_64 0:1.5.7-6.fc45 fedora 502.6 KiB Installing groups: Buildsystem building group Transaction Summary: Installing: 189 packages Total size of inbound packages is 72 MiB. Need to download 72 MiB. After this operation, 233 MiB extra will be used (install 233 MiB, remove 0 B). [ 1/189] bzip2-0:1.0.8-24.fc45.x86_64 100% | 7.3 MiB/s | 52.3 KiB | 00m00s [ 2/189] bash-0:5.3.15-2.fc45.x86_64 100% | 135.1 MiB/s | 1.9 MiB | 00m00s [ 3/189] cpio-0:2.15-10.fc45.x86_64 100% | 57.1 MiB/s | 292.5 KiB | 00m00s [ 4/189] fedora-release-common-0:45-0. 100% | 8.7 MiB/s | 17.9 KiB | 00m00s [ 5/189] diffutils-0:3.12-6.fc45.x86_6 100% | 96.8 MiB/s | 396.6 KiB | 00m00s [ 6/189] coreutils-0:9.11-6.fc45.x86_6 100% | 66.6 MiB/s | 1.2 MiB | 00m00s [ 7/189] findutils-1:4.11.0-2.fc45.x86 100% | 185.8 MiB/s | 570.7 KiB | 00m00s [ 8/189] glibc-minimal-langpack-0:2.44 100% | 39.1 MiB/s | 120.1 KiB | 00m00s [ 9/189] grep-0:3.12-4.fc45.x86_64 100% | 98.0 MiB/s | 301.0 KiB | 00m00s [ 10/189] gzip-0:1.14-4.fc45.x86_64 100% | 58.5 MiB/s | 179.6 KiB | 00m00s [ 11/189] info-0:7.3-3.fc45.x86_64 100% | 46.7 MiB/s | 191.2 KiB | 00m00s [ 12/189] patch-0:2.8-5.fc45.x86_64 100% | 37.3 MiB/s | 114.6 KiB | 00m00s [ 13/189] redhat-rpm-config-0:345-4.fc4 100% | 19.1 MiB/s | 78.2 KiB | 00m00s [ 14/189] rpm-build-0:6.1.0-1.fc45.x86_ 100% | 38.6 MiB/s | 158.1 KiB | 00m00s [ 15/189] sed-0:4.10-2.fc45.x86_64 100% | 63.0 MiB/s | 322.8 KiB | 00m00s [ 16/189] shadow-utils-2:4.20.0-1.fc45. 100% | 157.3 MiB/s | 1.4 MiB | 00m00s [ 17/189] unzip-0:6.0-71.fc45.x86_64 100% | 32.5 MiB/s | 199.6 KiB | 00m00s [ 18/189] tar-2:1.35-10.fc45.x86_64 100% | 106.2 MiB/s | 870.2 KiB | 00m00s [ 19/189] which-0:2.25-2.fc45.x86_64 100% | 20.6 MiB/s | 42.2 KiB | 00m00s [ 20/189] xz-1:5.8.3-2.fc45.x86_64 100% | 159.0 MiB/s | 651.2 KiB | 00m00s [ 21/189] gawk-0:5.4.1-1.fc45.x86_64 100% | 196.3 MiB/s | 1.2 MiB | 00m00s [ 22/189] util-linux-0:2.42.2-3.fc45.x8 100% | 97.3 MiB/s | 1.3 MiB | 00m00s [ 23/189] filesystem-0:3.18-59.fc45.x86 100% | 139.7 MiB/s | 1.8 MiB | 00m00s [ 24/189] ncurses-libs-0:6.6-3.fc45.x86 100% | 83.9 MiB/s | 343.7 KiB | 00m00s [ 25/189] glibc-0:2.44-1.fc45.x86_64 100% | 144.4 MiB/s | 2.5 MiB | 00m00s [ 26/189] bzip2-libs-0:1.0.8-24.fc45.x8 100% | 6.1 MiB/s | 43.5 KiB | 00m00s [ 27/189] libacl-0:2.4.0-2.fc45.x86_64 100% | 6.7 MiB/s | 27.5 KiB | 00m00s [ 28/189] gmp-1:6.3.0-6.fc45.x86_64 100% | 62.8 MiB/s | 321.8 KiB | 00m00s [ 29/189] coreutils-common-0:9.11-6.fc4 100% | 154.7 MiB/s | 2.2 MiB | 00m00s [ 30/189] libattr-0:2.6.0-2.fc45.x86_64 100% | 3.5 MiB/s | 18.1 KiB | 00m00s [ 31/189] libcap-0:2.78-2.fc45.x86_64 100% | 21.6 MiB/s | 88.6 KiB | 00m00s [ 32/189] libselinux-0:3.11-5.fc45.x86_ 100% | 25.4 MiB/s | 104.1 KiB | 00m00s [ 33/189] systemd-libs-0:262-1.fc45.x86 100% | 85.4 MiB/s | 961.4 KiB | 00m00s [ 34/189] fedora-repos-0:45-0.6.noarch 100% | 1.3 MiB/s | 9.4 KiB | 00m00s [ 35/189] openssl-libs-1:4.0.2-2.fc45.x 100% | 137.5 MiB/s | 2.3 MiB | 00m00s [ 36/189] redhat-systemd-presets-0:102- 100% | 1.7 MiB/s | 8.5 KiB | 00m00s [ 37/189] glibc-common-0:2.44-1.fc45.x8 100% | 67.1 MiB/s | 412.5 KiB | 00m00s [ 38/189] ed-0:1.22.6-1.fc45.x86_64 100% | 41.8 MiB/s | 85.6 KiB | 00m00s [ 39/189] pcre2-0:10.47-1.fc45.2.x86_64 100% | 67.5 MiB/s | 276.7 KiB | 00m00s [ 40/189] R-srpm-macros-0:1.3.7-3.fc45. 100% | 3.6 MiB/s | 11.1 KiB | 00m00s [ 41/189] ansible-srpm-macros-0:1-22.fc 100% | 9.7 MiB/s | 19.8 KiB | 00m00s [ 42/189] build-reproducibility-srpm-ma 100% | 5.3 MiB/s | 10.8 KiB | 00m00s [ 43/189] cmake-srpm-macros-0:4.3.0-5.f 100% | 5.0 MiB/s | 10.3 KiB | 00m00s [ 44/189] dwz-0:0.17-3.fc45.x86_64 100% | 68.0 MiB/s | 139.2 KiB | 00m00s [ 45/189] erlang-srpm-macros-0:0.3.11-2 100% | 4.9 MiB/s | 10.0 KiB | 00m00s [ 46/189] efi-srpm-macros-0:6-9.fc45.no 100% | 7.0 MiB/s | 21.4 KiB | 00m00s [ 47/189] filesystem-srpm-macros-0:3.18 100% | 12.9 MiB/s | 26.4 KiB | 00m00s [ 48/189] file-0:5.48-3.fc45.x86_64 100% | 12.4 MiB/s | 50.7 KiB | 00m00s [ 49/189] fonts-srpm-macros-1:5.0.0-4.f 100% | 8.8 MiB/s | 27.2 KiB | 00m00s [ 50/189] forge-srpm-macros-0:0.4.0-5.f 100% | 6.4 MiB/s | 19.7 KiB | 00m00s [ 51/189] fpc-srpm-macros-0:1.3-17.fc45 100% | 2.5 MiB/s | 7.8 KiB | 00m00s [ 52/189] gap-srpm-macros-0:2-3.fc45.no 100% | 3.0 MiB/s | 9.3 KiB | 00m00s [ 53/189] ghc-srpm-macros-0:1.10-2.fc45 100% | 2.8 MiB/s | 8.5 KiB | 00m00s [ 54/189] gnat-srpm-macros-0:7-3.fc45.n 100% | 2.8 MiB/s | 8.6 KiB | 00m00s [ 55/189] gnome-srpm-macros-0:1.0-2.fc4 100% | 4.3 MiB/s | 8.8 KiB | 00m00s [ 56/189] java-srpm-macros-0:1-9.fc45.n 100% | 2.7 MiB/s | 8.3 KiB | 00m00s [ 57/189] kernel-srpm-macros-0:1.0-30.f 100% | 2.0 MiB/s | 8.3 KiB | 00m00s [ 58/189] go-srpm-macros-0:3.8.0-3.fc45 100% | 5.4 MiB/s | 27.8 KiB | 00m00s [ 59/189] lua-srpm-macros-0:1-18.fc45.n 100% | 2.8 MiB/s | 8.7 KiB | 00m00s [ 60/189] meson-srpm-macros-0:1.12.0-2. 100% | 3.7 MiB/s | 11.5 KiB | 00m00s [ 61/189] ocaml-srpm-macros-0:11-4.fc45 100% | 2.9 MiB/s | 9.0 KiB | 00m00s [ 62/189] openblas-srpm-macros-0:2-22.f 100% | 3.7 MiB/s | 7.5 KiB | 00m00s [ 63/189] perl-srpm-macros-0:1-65.fc45. 100% | 1.6 MiB/s | 8.4 KiB | 00m00s [ 64/189] package-notes-srpm-macros-0:0 100% | 1.7 MiB/s | 10.5 KiB | 00m00s [ 65/189] pyproject-srpm-macros-0:1.23. 100% | 3.0 MiB/s | 15.6 KiB | 00m00s [ 66/189] qt5-srpm-macros-0:5.15.18-3.f 100% | 2.6 MiB/s | 8.1 KiB | 00m00s [ 67/189] python-srpm-macros-0:3.15-2.f 100% | 5.8 MiB/s | 23.9 KiB | 00m00s [ 68/189] qt6-srpm-macros-0:6.11.2-1.fc 100% | 3.0 MiB/s | 9.1 KiB | 00m00s [ 69/189] rust-srpm-macros-0:28.5-2.fc4 100% | 3.7 MiB/s | 11.4 KiB | 00m00s [ 70/189] tree-sitter-srpm-macros-0:0.4 100% | 4.6 MiB/s | 14.0 KiB | 00m00s [ 71/189] rpm-0:6.1.0-1.fc45.x86_64 100% | 111.4 MiB/s | 570.4 KiB | 00m00s [ 72/189] zig-srpm-macros-0:1-9.fc45.no 100% | 4.3 MiB/s | 8.8 KiB | 00m00s [ 73/189] zip-0:3.0-46.fc45.x86_64 100% | 64.6 MiB/s | 264.6 KiB | 00m00s [ 74/189] debugedit-0:5.3-3.fc45.x86_64 100% | 17.2 MiB/s | 87.9 KiB | 00m00s [ 75/189] elfutils-libelf-0:0.196-1.fc4 100% | 46.6 MiB/s | 238.4 KiB | 00m00s [ 76/189] elfutils-0:0.196-1.fc45.x86_6 100% | 76.0 MiB/s | 622.3 KiB | 00m00s [ 77/189] libarchive-0:3.8.8-3.fc45.x86 100% | 86.9 MiB/s | 445.1 KiB | 00m00s [ 78/189] libgcc-0:16.2.1-2.fc45.x86_64 100% | 44.4 MiB/s | 136.3 KiB | 00m00s [ 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elfutils-debuginfod-client-0: 100% | 11.5 MiB/s | 47.1 KiB | 00m00s [118/189] json-c-0:0.18-9.fc45.x86_64 100% | 15.2 MiB/s | 46.7 KiB | 00m00s [119/189] libpfm-0:4.13.0-23.fc45.x86_6 100% | 73.9 MiB/s | 227.0 KiB | 00m00s [120/189] libzstd-0:1.5.7-6.fc45.x86_64 100% | 71.1 MiB/s | 363.9 KiB | 00m00s [121/189] libxml2-0:2.13.9-4.fc45.x86_6 100% | 99.7 MiB/s | 714.8 KiB | 00m00s [122/189] lz4-libs-0:1.10.0-5.fc45.x86_ 100% | 13.1 MiB/s | 80.4 KiB | 00m00s [123/189] libgomp-0:16.2.1-2.fc45.x86_6 100% | 129.3 MiB/s | 397.3 KiB | 00m00s [124/189] lua-libs-0:5.5.1-2.fc45.x86_6 100% | 35.2 MiB/s | 144.3 KiB | 00m00s [125/189] rpm-sign-libs-0:6.1.0-1.fc45. 100% | 6.6 MiB/s | 26.9 KiB | 00m00s [126/189] rpm-sequoia-0:1.10.3-1.fc45.x 100% | 114.4 MiB/s | 937.1 KiB | 00m00s [127/189] sqlite-libs-0:3.53.4-1.fc45.x 100% | 132.2 MiB/s | 812.1 KiB | 00m00s [128/189] ima-evm-utils-libs-0:1.6.2-12 100% | 7.4 MiB/s | 30.2 KiB | 00m00s [129/189] libfsverity-0:1.7-4.fc45.x86_ 100% | 4.6 MiB/s | 19.0 KiB 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MiB/s | 172.2 KiB | 00m00s [143/189] gnutls-0:3.8.13-3.fc45.x86_64 100% | 88.9 MiB/s | 1.4 MiB | 00m00s [144/189] openldap-0:2.6.14-1.fc45.x86_ 100% | 33.3 MiB/s | 272.7 KiB | 00m00s [145/189] libusb1-0:1.0.30-2.fc45.x86_6 100% | 11.7 MiB/s | 83.8 KiB | 00m00s [146/189] libtasn1-0:4.21.0-2.fc45.x86_ 100% | 24.7 MiB/s | 75.9 KiB | 00m00s [147/189] libidn2-0:2.3.8-4.fc45.x86_64 100% | 42.8 MiB/s | 175.2 KiB | 00m00s [148/189] libunistring-0:1.1-12.fc45.x8 100% | 88.8 MiB/s | 545.8 KiB | 00m00s [149/189] nettle-0:4.0-5.fc45.x86_64 100% | 69.9 MiB/s | 429.7 KiB | 00m00s [150/189] p11-kit-0:0.26.5-1.fc45.x86_6 100% | 78.1 MiB/s | 560.0 KiB | 00m00s [151/189] cyrus-sasl-lib-0:2.1.28-37.fc 100% | 88.7 MiB/s | 817.8 KiB | 00m00s [152/189] libevent-0:2.1.13-1.fc45.x86_ 100% | 47.1 MiB/s | 289.3 KiB | 00m00s [153/189] libtool-ltdl-0:2.5.4-11.fc45. 100% | 7.2 MiB/s | 36.7 KiB | 00m00s [154/189] libffi-0:3.5.2-3.fc45.x86_64 100% | 20.4 MiB/s | 41.9 KiB | 00m00s [155/189] gdbm-libs-1:1.23-12.fc45.x86_ 100% | 28.4 MiB/s | 58.2 KiB | 00m00s [156/189] jansson-0:2.14-5.fc45.x86_64 100% | 15.3 MiB/s | 46.9 KiB | 00m00s [157/189] alternatives-0:1.33-6.fc45.x8 100% | 7.7 MiB/s | 39.4 KiB | 00m00s [158/189] pkgconf-pkg-config-0:2.5.1-2. 100% | 3.1 MiB/s | 9.5 KiB | 00m00s [159/189] pkgconf-0:2.5.1-2.fc45.x86_64 100% | 12.0 MiB/s | 49.0 KiB | 00m00s [160/189] pkgconf-m4-0:2.5.1-2.fc45.noa 100% | 4.5 MiB/s | 13.8 KiB | 00m00s [161/189] libpkgconf-0:2.5.1-2.fc45.x86 100% | 10.4 MiB/s | 42.6 KiB | 00m00s [162/189] p11-kit-trust-0:0.26.5-1.fc45 100% | 28.6 MiB/s | 146.3 KiB | 00m00s [163/189] fedora-release-0:45-0.10.noar 100% | 2.9 MiB/s | 12.0 KiB | 00m00s [164/189] binutils-0:2.47-1.fc45.x86_64 100% | 223.0 MiB/s | 6.2 MiB | 00m00s [165/189] systemd-standalone-sysusers-0 100% | 42.3 MiB/s | 433.2 KiB | 00m00s [166/189] xxhash-libs-0:0.8.3-5.fc45.x8 100% | 13.4 MiB/s | 41.3 KiB | 00m00s [167/189] fedora-release-identity-basic 100% | 4.2 MiB/s | 12.8 KiB | 00m00s [168/189] gdb-minimal-0:17.2-6.fc45.x86 100% | 225.6 MiB/s | 4.7 MiB | 00m00s [169/189] libcurl-0:8.21.0-5.fc45.x86_6 100% | 47.0 MiB/s | 481.3 KiB | 00m00s [170/189] krb5-libs-0:1.22.2-9.fc45.x86 100% | 71.3 MiB/s | 803.1 KiB | 00m00s [171/189] libnghttp2-0:1.69.0-5.fc45.x8 100% | 25.1 MiB/s | 77.2 KiB | 00m00s [172/189] libbrotli-0:1.2.0-6.fc45.x86_ 100% | 67.8 MiB/s | 347.3 KiB | 00m00s [173/189] libnghttp3-0:1.18.0-1.fc45.x8 100% | 18.3 MiB/s | 75.1 KiB | 00m00s [174/189] libpsl-0:0.23.1-1.fc45.x86_64 100% | 16.5 MiB/s | 67.6 KiB | 00m00s [175/189] ngtcp2-0:1.22.1-3.fc45.x86_64 100% | 77.0 MiB/s | 157.7 KiB | 00m00s [176/189] libssh-0:0.12.2-1.fc45.x86_64 100% | 72.2 MiB/s | 295.9 KiB | 00m00s [177/189] ngtcp2-crypto-ossl-0:1.22.1-3 100% | 9.1 MiB/s | 27.8 KiB | 00m00s [178/189] keyutils-libs-0:1.6.3-8.fc45. 100% | 15.4 MiB/s | 31.5 KiB | 00m00s [179/189] libcom_err-0:1.47.4-2.fc45.x8 100% | 6.5 MiB/s | 26.6 KiB | 00m00s [180/189] libverto-0:0.3.2-13.fc45.x86_ 100% | 10.2 MiB/s | 21.0 KiB | 00m00s [181/189] publicsuffix-list-dafsa-0:202 100% | 29.8 MiB/s | 61.1 KiB | 00m00s [182/189] libssh-config-0:0.12.2-1.fc45 100% | 4.4 MiB/s | 8.9 KiB | 00m00s [183/189] libfido2-0:1.17.0-5.fc45.x86_ 100% | 26.1 MiB/s | 106.9 KiB | 00m00s [184/189] libcbor-0:0.14.0-3.fc45.x86_6 100% | 9.0 MiB/s | 36.8 KiB | 00m00s [185/189] selinux-policy-0:45.19-1.fc45 100% | 13.3 MiB/s | 41.0 KiB | 00m00s [186/189] policycoreutils-0:3.11-2.fc45 100% | 63.7 MiB/s | 260.9 KiB | 00m00s [187/189] rpm-plugin-selinux-0:6.1.0-1. 100% | 5.8 MiB/s | 17.8 KiB | 00m00s [188/189] libselinux-utils-0:3.11-5.fc4 100% | 24.1 MiB/s | 123.6 KiB | 00m00s [189/189] selinux-policy-targeted-0:45. 100% | 262.2 MiB/s | 6.8 MiB | 00m00s -------------------------------------------------------------------------------- [189/189] Total 100% | 179.2 MiB/s | 72.2 MiB | 00m00s Running transaction Importing OpenPGP key 0xF577861E: UserID : "Fedora (45) " Fingerprint: 4F50A6114CD5C6976A7F1179655A4B02F577861E From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-45-primary The key was successfully imported. [ 1/191] Verify package files 100% | 679.0 B/s | 189.0 B | 00m00s >>> Running %pretrans scriptlet: filesystem-0:3.18-59.fc45.x86_64 >>> Finished %pretrans scriptlet: filesystem-0:3.18-59.fc45.x86_64 >>> [RPM] failed to open /var/lib/mock/fedora-45-x86_64-1790274075.697241/root/etc/group for id/name lookup: No such file or directory [ 2/191] Prepare transaction 100% | 3.4 KiB/s | 189.0 B | 00m00s [ 3/191] Installing libgcc-0:16.2.1-2. 100% | 266.0 MiB/s | 272.4 KiB | 00m00s [ 4/191] Installing redhat-systemd-pre 100% | 0.0 B/s | 1.5 KiB | 00m00s [ 5/191] Installing redhat-systemd-pre 100% | 0.0 B/s | 18.1 KiB | 00m00s [ 6/191] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 7/191] Installing publicsuffix-list- 100% | 0.0 B/s | 72.0 KiB | 00m00s [ 8/191] Installing fedora-release-ide 100% | 0.0 B/s | 912.0 B | 00m00s [ 9/191] Installing fedora-gpg-keys-0: 100% | 44.4 MiB/s | 181.7 KiB | 00m00s [ 10/191] Installing fedora-repos-0:45- 100% | 0.0 B/s | 5.9 KiB | 00m00s [ 11/191] Installing fedora-release-com 100% | 7.2 MiB/s | 7.4 KiB | 00m00s [ 12/191] Installing fedora-release-0:4 100% | 17.3 KiB/s | 124.0 B | 00m00s >>> Running sysusers scriptlet: setup-0:2.15.1-2.fc45.noarch >>> Finished sysusers scriptlet: setup-0:2.15.1-2.fc45.noarch >>> Scriptlet output: >>> Creating group 'adm' with GID 4. >>> Creating group 'audio' with GID 63. >>> Creating group 'cdrom' with GID 11. >>> Creating group 'clock' with GID 103. >>> Creating group 'dialout' with GID 18. >>> Creating group 'disk' with GID 6. >>> Creating group 'floppy' with GID 19. >>> Creating group 'ftp' with GID 50. >>> Creating group 'games' with GID 20. >>> Creating group 'input' with GID 104. >>> Creating group 'kmem' with GID 9. >>> Creating group 'kvm' with GID 36. >>> Creating group 'lock' with GID 54. >>> Creating group 'lp' with GID 7. >>> Creating group 'mail' with GID 12. >>> Creating group 'man' with GID 15. >>> Creating group 'mem' with GID 8. >>> Creating group 'nobody' with GID 65534. >>> Creating group 'render' with GID 105. >>> Creating group 'root' with GID 0. >>> Creating group 'sgx' with GID 106. >>> Creating group 'sys' with GID 3. >>> Creating group 'tape' with GID 33. >>> Creating group 'tty' with GID 5. >>> Creating group 'users' with GID 100. >>> Creating group 'utmp' with GID 22. >>> Creating group 'video' with GID 39. >>> Creating group 'wheel' with GID 10. >>> Creating user 'adm' (adm) with UID 3 and GID 4. >>> Creating group 'bin' with GID 1. >>> Creating user 'bin' (bin) with UID 1 and GID 1. >>> Creating group 'daemon' with GID 2. >>> Creating user 'daemon' (daemon) with UID 2 and GID 2. >>> Creating user 'ftp' (FTP User) with UID 14 and GID 50. >>> Creating user 'games' (games) with UID 12 and GID 100. >>> Creating user 'halt' (halt) with UID 7 and GID 0. >>> Creating user 'lp' (lp) with UID 4 and GID 7. >>> Creating user 'mail' (mail) with UID 8 and GID 12. >>> Creating user 'nobody' (Kernel Overflow User) with UID 65534 and GID 65534. >>> Creating user 'operator' (operator) with UID 11 and GID 0. >>> Creating user 'root' (Super User) with UID 0 and GID 0. >>> Creating user 'shutdown' (shutdown) with UID 6 and GID 0. >>> Creating user 'sync' (sync) with UID 5 and GID 0. >>> [ 13/191] Installing setup-0:2.15.1-2.f 100% | 39.7 MiB/s | 731.3 KiB | 00m00s >>> [RPM] /etc/hosts created as /etc/hosts.rpmnew [ 14/191] Installing filesystem-0:3.18- 100% | 2.7 MiB/s | 253.6 KiB | 00m00s [ 15/191] Installing pkgconf-m4-0:2.5.1 100% | 0.0 B/s | 14.7 KiB | 00m00s [ 16/191] Installing pcre2-syntax-0:10. 100% | 277.7 MiB/s | 284.3 KiB | 00m00s [ 17/191] Installing gnulib-l10n-0:2024 100% | 215.5 MiB/s | 661.9 KiB | 00m00s [ 18/191] Installing coreutils-common-0 100% | 405.8 MiB/s | 11.0 MiB | 00m00s [ 19/191] Installing ncurses-base-0:6.6 100% | 86.7 MiB/s | 355.3 KiB | 00m00s [ 20/191] Installing bash-0:5.3.15-2.fc 100% | 249.2 MiB/s | 8.5 MiB | 00m00s [ 21/191] Installing glibc-common-0:2.4 100% | 49.0 MiB/s | 1.0 MiB | 00m00s [ 22/191] Installing glibc-gconv-extra- 100% | 324.3 MiB/s | 7.8 MiB | 00m00s [ 23/191] Installing glibc-0:2.44-1.fc4 100% | 183.1 MiB/s | 7.1 MiB | 00m00s [ 24/191] Installing ncurses-libs-0:6.6 100% | 238.0 MiB/s | 974.9 KiB | 00m00s [ 25/191] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 26/191] Installing zlib-ng-compat-0:2 100% | 162.5 MiB/s | 166.4 KiB | 00m00s [ 27/191] Installing bzip2-libs-0:1.0.8 100% | 0.0 B/s | 81.6 KiB | 00m00s [ 28/191] Installing libgpg-error-0:1.6 100% | 49.3 MiB/s | 959.7 KiB | 00m00s [ 29/191] Installing libstdc++-0:16.2.1 100% | 385.8 MiB/s | 3.1 MiB | 00m00s [ 30/191] Installing libzstd-0:1.5.7-6. 100% | 311.7 MiB/s | 957.4 KiB | 00m00s [ 31/191] Installing elfutils-libelf-0: 100% | 481.0 MiB/s | 1.4 MiB | 00m00s [ 32/191] Installing libassuan-0:2.5.7- 100% | 161.8 MiB/s | 165.7 KiB | 00m00s [ 33/191] Installing libgcrypt-0:1.12.2 100% | 415.7 MiB/s | 1.7 MiB | 00m00s [ 34/191] Installing readline-0:8.3-6.f 100% | 252.8 MiB/s | 517.7 KiB | 00m00s [ 35/191] Installing gmp-1:6.3.0-6.fc45 100% | 399.1 MiB/s | 817.4 KiB | 00m00s [ 36/191] Installing libacl-0:2.4.0-2.f 100% | 0.0 B/s | 44.7 KiB | 00m00s [ 37/191] Installing systemd-libs-0:262 100% | 395.8 MiB/s | 2.8 MiB | 00m00s [ 38/191] Installing xz-libs-1:5.8.3-2. 100% | 217.6 MiB/s | 222.8 KiB | 00m00s [ 39/191] Installing libuuid-0:2.42.2-3 100% | 0.0 B/s | 38.4 KiB | 00m00s [ 40/191] Installing popt-0:1.19-11.fc4 100% | 70.0 MiB/s | 143.3 KiB | 00m00s [ 41/191] Installing sqlite-libs-0:3.53 100% | 404.7 MiB/s | 1.6 MiB | 00m00s [ 42/191] Installing npth-0:1.8-5.fc45. 100% | 0.0 B/s | 50.6 KiB | 00m00s [ 43/191] Installing libblkid-0:2.42.2- 100% | 276.7 MiB/s | 283.4 KiB | 00m00s [ 44/191] Installing elfutils-libs-0:0. 100% | 352.3 MiB/s | 721.4 KiB | 00m00s [ 45/191] Installing libsepol-0:3.11-2. 100% | 423.4 MiB/s | 867.1 KiB | 00m00s [ 46/191] Installing gnupg2-gpgconf-0:2 100% | 14.7 MiB/s | 255.9 KiB | 00m00s [ 47/191] Installing pcre2-0:10.47-1.fc 100% | 351.5 MiB/s | 720.0 KiB | 00m00s [ 48/191] Installing libselinux-0:3.11- 100% | 201.6 MiB/s | 206.5 KiB | 00m00s [ 49/191] Installing grep-0:3.12-4.fc45 100% | 52.8 MiB/s | 1.0 MiB | 00m00s [ 50/191] Installing sed-0:4.10-2.fc45. 100% | 45.0 MiB/s | 874.9 KiB | 00m00s [ 51/191] Installing findutils-1:4.11.0 100% | 93.2 MiB/s | 2.0 MiB | 00m00s [ 52/191] Installing libxcrypt-0:4.5.2- 100% | 289.0 MiB/s | 295.9 KiB | 00m00s [ 53/191] Installing json-c-0:0.18-9.fc 100% | 0.0 B/s | 83.9 KiB | 00m00s [ 54/191] Installing libtasn1-0:4.21.0- 100% | 174.3 MiB/s | 178.5 KiB | 00m00s [ 55/191] Installing libunistring-0:1.1 100% | 346.9 MiB/s | 1.7 MiB | 00m00s [ 56/191] Installing libidn2-0:2.3.8-4. 100% | 61.0 MiB/s | 562.6 KiB | 00m00s [ 57/191] Installing crypto-policies-0: 100% | 38.9 MiB/s | 159.5 KiB | 00m00s [ 58/191] Installing xz-1:5.8.3-2.fc45. 100% | 63.9 MiB/s | 1.4 MiB | 00m00s [ 59/191] Installing libmount-0:2.42.2- 100% | 396.3 MiB/s | 405.8 KiB | 00m00s [ 60/191] Installing gnupg2-verify-0:2. 100% | 20.5 MiB/s | 357.7 KiB | 00m00s [ 61/191] Installing mpfr-0:4.2.2-4.fc4 100% | 277.0 MiB/s | 850.9 KiB | 00m00s [ 62/191] Installing gawk-0:5.4.1-1.fc4 100% | 101.3 MiB/s | 2.2 MiB | 00m00s [ 63/191] Installing dwz-0:0.17-3.fc45. 100% | 16.8 MiB/s | 292.5 KiB | 00m00s [ 64/191] Installing libksba-0:1.8.0-3. 100% | 211.8 MiB/s | 433.7 KiB | 00m00s [ 65/191] Installing unzip-0:6.0-71.fc4 100% | 25.6 MiB/s | 445.3 KiB | 00m00s [ 66/191] Installing file-libs-0:5.48-3 100% | 685.8 MiB/s | 12.3 MiB | 00m00s [ 67/191] Installing file-0:5.48-3.fc45 100% | 6.3 MiB/s | 103.4 KiB | 00m00s [ 68/191] Installing diffutils-0:3.12-6 100% | 78.2 MiB/s | 1.6 MiB | 00m00s [ 69/191] Installing libattr-0:2.6.0-2. 100% | 0.0 B/s | 25.2 KiB | 00m00s [ 70/191] Installing libeconf-0:0.7.9-4 100% | 64.9 MiB/s | 66.4 KiB | 00m00s [ 71/191] Installing libcap-ng-0:0.9.6- 100% | 69.0 MiB/s | 70.6 KiB | 00m00s [ 72/191] Installing audit-libs-0:4.2.1 100% | 383.9 MiB/s | 393.1 KiB | 00m00s [ 73/191] Installing pam-libs-0:1.7.2-4 100% | 133.7 MiB/s | 136.9 KiB | 00m00s [ 74/191] Installing libcap-0:2.78-2.fc 100% | 12.3 MiB/s | 213.3 KiB | 00m00s [ 75/191] Installing libsemanage-0:3.11 100% | 314.8 MiB/s | 322.4 KiB | 00m00s [ 76/191] Installing libsmartcols-0:2.4 100% | 185.0 MiB/s | 189.5 KiB | 00m00s [ 77/191] Installing lua-libs-0:5.5.1-2 100% | 292.4 MiB/s | 299.5 KiB | 00m00s [ 78/191] Installing libffi-0:3.5.2-3.f 100% | 83.1 MiB/s | 85.1 KiB | 00m00s [ 79/191] Installing p11-kit-0:0.26.5-1 100% | 109.8 MiB/s | 2.6 MiB | 00m00s [ 80/191] Installing alternatives-0:1.3 100% | 3.9 MiB/s | 63.6 KiB | 00m00s [ 81/191] Installing p11-kit-trust-0:0. 100% | 19.5 MiB/s | 480.1 KiB | 00m00s [ 82/191] Installing ngtcp2-0:1.22.1-3. 100% | 164.0 MiB/s | 335.8 KiB | 00m00s [ 83/191] Installing util-linux-core-0: 100% | 68.3 MiB/s | 1.5 MiB | 00m00s [ 84/191] Installing liblastlog2-0:2.42 100% | 7.7 MiB/s | 39.5 KiB | 00m00s [ 85/191] Installing zip-0:3.0-46.fc45. 100% | 35.9 MiB/s | 698.0 KiB | 00m00s [ 86/191] Installing gnupg2-keyboxd-0:2 100% | 39.6 MiB/s | 202.5 KiB | 00m00s [ 87/191] Installing libpsl-0:0.23.1-1. 100% | 79.6 MiB/s | 81.5 KiB | 00m00s [ 88/191] Installing tar-2:1.35-10.fc45 100% | 119.2 MiB/s | 3.0 MiB | 00m00s [ 89/191] Installing linkdupes-0:0.7.3- 100% | 42.5 MiB/s | 783.5 KiB | 00m00s [ 90/191] Installing libselinux-utils-0 100% | 17.4 MiB/s | 320.3 KiB | 00m00s [ 91/191] Installing libfdisk-0:2.42.2- 100% | 384.2 MiB/s | 393.4 KiB | 00m00s [ 92/191] Installing fips-provider-0:1. 100% | 438.2 MiB/s | 4.8 MiB | 00m00s [ 93/191] Installing openssl-libs-1:4.0 100% | 417.7 MiB/s | 6.7 MiB | 00m00s [ 94/191] Installing coreutils-0:9.11-6 100% | 164.6 MiB/s | 5.9 MiB | 00m00s [ 95/191] Installing ca-certificates-0: 100% | 2.3 MiB/s | 2.5 MiB | 00m01s [ 96/191] Installing gzip-0:1.14-4.fc45 100% | 19.9 MiB/s | 407.2 KiB | 00m00s [ 97/191] Installing util-linux-0:2.42. 100% | 96.3 MiB/s | 3.8 MiB | 00m00s [ 98/191] Installing policycoreutils-0: 100% | 32.1 MiB/s | 921.4 KiB | 00m00s [ 99/191] Installing selinux-policy-0:4 100% | 1.9 MiB/s | 34.5 KiB | 00m00s [100/191] Installing selinux-policy-tar 100% | 222.8 MiB/s | 15.1 MiB | 00m00s [101/191] Installing rpm-sequoia-0:1.10 100% | 347.9 MiB/s | 2.4 MiB | 00m00s [102/191] Installing libfsverity-0:1.7- 100% | 0.0 B/s | 25.4 KiB | 00m00s [103/191] Installing libevent-0:2.1.13- 100% | 320.5 MiB/s | 984.5 KiB | 00m00s [104/191] Installing ngtcp2-crypto-ossl 100% | 0.0 B/s | 52.5 KiB | 00m00s [105/191] Installing libxml2-0:2.13.9-4 100% | 79.8 MiB/s | 1.8 MiB | 00m00s [106/191] Installing libusb1-0:1.0.30-2 100% | 16.1 MiB/s | 181.8 KiB | 00m00s >>> Running sysusers scriptlet: tpm2-tss-0:4.2.0-1.fc45.x86_64 >>> Finished sysusers scriptlet: tpm2-tss-0:4.2.0-1.fc45.x86_64 >>> Scriptlet output: >>> Creating group 'tss' with GID 59. >>> Creating user 'tss' (Account used for TPM access) with UID 59 and GID 59. >>> [107/191] Installing tpm2-tss-0:4.2.0-1 100% | 277.9 MiB/s | 1.7 MiB | 00m00s [108/191] Installing ima-evm-utils-libs 100% | 56.5 MiB/s | 57.9 KiB | 00m00s [109/191] Installing gnupg2-gpg-agent-0 100% | 27.8 MiB/s | 682.8 KiB | 00m00s [110/191] Installing nettle-0:4.0-5.fc4 100% | 262.0 MiB/s | 805.0 KiB | 00m00s [111/191] Installing gnutls-0:3.8.13-3. 100% | 383.8 MiB/s | 3.8 MiB | 00m00s [112/191] Installing zstd-0:1.5.7-6.fc4 100% | 27.5 MiB/s | 506.1 KiB | 00m00s [113/191] Installing bzip2-0:1.0.8-24.f 100% | 5.7 MiB/s | 99.5 KiB | 00m00s [114/191] Installing add-determinism-0: 100% | 102.8 MiB/s | 2.2 MiB | 00m00s [115/191] Installing build-reproducibil 100% | 0.0 B/s | 1.5 KiB | 00m00s [116/191] Installing cpio-0:2.15-10.fc4 100% | 58.1 MiB/s | 1.1 MiB | 00m00s [117/191] Installing ed-0:1.22.6-1.fc45 100% | 8.8 MiB/s | 153.2 KiB | 00m00s [118/191] Installing patch-0:2.8-5.fc45 100% | 13.1 MiB/s | 228.1 KiB | 00m00s [119/191] Installing libpfm-0:4.13.0-23 100% | 576.1 MiB/s | 1.7 MiB | 00m00s [120/191] Installing lz4-libs-0:1.10.0- 100% | 162.5 MiB/s | 166.4 KiB | 00m00s [121/191] Installing libarchive-0:3.8.8 100% | 326.1 MiB/s | 1.0 MiB | 00m00s [122/191] Installing libgomp-0:16.2.1-2 100% | 282.7 MiB/s | 578.9 KiB | 00m00s [123/191] Installing libtool-ltdl-0:2.5 100% | 69.5 MiB/s | 71.1 KiB | 00m00s [124/191] Installing gdbm-libs-1:1.23-1 100% | 132.2 MiB/s | 135.4 KiB | 00m00s [125/191] Installing cyrus-sasl-lib-0:2 100% | 106.3 MiB/s | 2.3 MiB | 00m00s [126/191] Installing openldap-0:2.6.14- 100% | 222.2 MiB/s | 682.7 KiB | 00m00s [127/191] Installing gnupg2-dirmngr-0:2 100% | 25.7 MiB/s | 632.8 KiB | 00m00s [128/191] Installing gnupg2-0:2.4.9-18. 100% | 197.0 MiB/s | 6.5 MiB | 00m00s [129/191] Installing gpgverify-0:2.2-5. 100% | 0.0 B/s | 9.4 KiB | 00m00s [130/191] Installing jansson-0:2.14-5.f 100% | 88.2 MiB/s | 90.3 KiB | 00m00s [131/191] Installing libpkgconf-0:2.5.1 100% | 89.1 MiB/s | 91.3 KiB | 00m00s [132/191] Installing pkgconf-0:2.5.1-2. 100% | 5.5 MiB/s | 95.2 KiB | 00m00s [133/191] Installing pkgconf-pkg-config 100% | 110.8 KiB/s | 1.8 KiB | 00m00s [134/191] Installing systemd-standalone 100% | 50.5 MiB/s | 981.8 KiB | 00m00s [135/191] Installing rpm-libs-0:6.1.0-1 100% | 366.4 MiB/s | 1.1 MiB | 00m00s [136/191] Installing rpm-sign-libs-0:6. 100% | 0.0 B/s | 40.5 KiB | 00m00s [137/191] Installing rpm-build-libs-0:6 100% | 282.4 MiB/s | 289.1 KiB | 00m00s [138/191] Installing xxhash-libs-0:0.8. 100% | 93.2 MiB/s | 95.4 KiB | 00m00s [139/191] Installing libbrotli-0:1.2.0- 100% | 282.3 MiB/s | 867.3 KiB | 00m00s [140/191] Installing libnghttp2-0:1.69. 100% | 163.4 MiB/s | 167.3 KiB | 00m00s [141/191] Installing libnghttp3-0:1.18. 100% | 161.0 MiB/s | 164.8 KiB | 00m00s [142/191] Installing keyutils-libs-0:1. 100% | 0.0 B/s | 55.6 KiB | 00m00s [143/191] Installing libcom_err-0:1.47. 100% | 0.0 B/s | 64.1 KiB | 00m00s [144/191] Installing libverto-0:0.3.2-1 100% | 26.4 MiB/s | 27.1 KiB | 00m00s [145/191] Installing krb5-libs-0:1.22.2 100% | 341.0 MiB/s | 2.4 MiB | 00m00s [146/191] Installing libcbor-0:0.14.0-3 100% | 82.9 MiB/s | 84.9 KiB | 00m00s [147/191] Installing libfido2-0:1.17.0- 100% | 252.0 MiB/s | 258.1 KiB | 00m00s [148/191] Installing libssh-0:0.12.2-1. 100% | 355.4 MiB/s | 727.8 KiB | 00m00s [149/191] Installing libcurl-0:8.21.0-5 100% | 351.4 MiB/s | 1.1 MiB | 00m00s [150/191] Installing elfutils-debuginfo 100% | 4.7 MiB/s | 82.2 KiB | 00m00s [151/191] Installing elfutils-0:0.196-1 100% | 127.6 MiB/s | 3.1 MiB | 00m00s [152/191] Installing binutils-0:2.47-1. 100% | 334.1 MiB/s | 28.4 MiB | 00m00s [153/191] Installing gdb-minimal-0:17.2 100% | 272.4 MiB/s | 14.2 MiB | 00m00s [154/191] Installing debugedit-0:5.3-3. 100% | 12.2 MiB/s | 224.1 KiB | 00m00s [155/191] Installing curl-0:8.21.0-5.fc 100% | 19.2 MiB/s | 490.6 KiB | 00m00s [156/191] Installing rpm-0:6.1.0-1.fc45 100% | 73.6 MiB/s | 2.5 MiB | 00m00s [157/191] Installing cmake-srpm-macros- 100% | 0.0 B/s | 804.0 B | 00m00s [158/191] Installing efi-srpm-macros-0: 100% | 0.0 B/s | 41.3 KiB | 00m00s [159/191] Installing java-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [160/191] Installing lua-srpm-macros-0: 100% | 380.5 KiB/s | 1.9 KiB | 00m00s [161/191] Installing tree-sitter-srpm-m 100% | 0.0 B/s | 9.6 KiB | 00m00s [162/191] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [163/191] Installing filesystem-srpm-ma 100% | 0.0 B/s | 38.9 KiB | 00m00s [164/191] Installing rust-srpm-macros-0 100% | 0.0 B/s | 6.4 KiB | 00m00s [165/191] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 748.0 B | 00m00s [166/191] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [167/191] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [168/191] Installing package-notes-srpm 100% | 0.0 B/s | 2.1 KiB | 00m00s [169/191] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [170/191] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.1 KiB | 00m00s [171/191] Installing meson-srpm-macros- 100% | 0.0 B/s | 1.9 KiB | 00m00s [172/191] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [173/191] Installing gnome-srpm-macros- 100% | 0.0 B/s | 4.1 KiB | 00m00s [174/191] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [175/191] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [176/191] Installing gap-srpm-macros-0: 100% | 0.0 B/s | 2.7 KiB | 00m00s [177/191] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [178/191] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [179/191] Installing redhat-rpm-config- 100% | 185.9 MiB/s | 190.4 KiB | 00m00s [180/191] Installing forge-srpm-macros- 100% | 0.0 B/s | 40.3 KiB | 00m00s [181/191] Installing rpm-build-0:6.1.0- 100% | 16.6 MiB/s | 322.1 KiB | 00m00s [182/191] Installing erlang-srpm-macros 100% | 0.0 B/s | 2.5 KiB | 00m00s [183/191] Installing pyproject-srpm-mac 100% | 0.0 B/s | 4.0 KiB | 00m00s [184/191] Installing fonts-srpm-macros- 100% | 0.0 B/s | 57.0 KiB | 00m00s [185/191] Installing go-srpm-macros-0:3 100% | 0.0 B/s | 63.0 KiB | 00m00s [186/191] Installing R-srpm-macros-0:1. 100% | 0.0 B/s | 4.4 KiB | 00m00s [187/191] Installing python-srpm-macros 100% | 0.0 B/s | 52.9 KiB | 00m00s [188/191] Installing rpm-plugin-selinux 100% | 0.0 B/s | 12.9 KiB | 00m00s [189/191] Installing which-0:2.25-2.fc4 100% | 4.7 MiB/s | 85.8 KiB | 00m00s [190/191] Installing shadow-utils-2:4.2 100% | 127.3 MiB/s | 3.9 MiB | 00m00s [191/191] Installing info-0:7.3-3.fc45. 100% | 59.6 KiB/s | 372.8 KiB | 00m06s Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: R-srpm-macros-1.3.7-3.fc45.noarch add-determinism-0.7.3-3.fc45.x86_64 alternatives-1.33-6.fc45.x86_64 ansible-srpm-macros-1-22.fc45.noarch audit-libs-4.2.1-2.fc45.x86_64 bash-5.3.15-2.fc45.x86_64 binutils-2.47-1.fc45.x86_64 build-reproducibility-srpm-macros-0.7.3-3.fc45.noarch bzip2-1.0.8-24.fc45.x86_64 bzip2-libs-1.0.8-24.fc45.x86_64 ca-certificates-2026.2.90_v9.0.317-1.fc45.noarch cmake-srpm-macros-4.3.0-5.fc45.noarch coreutils-9.11-6.fc45.x86_64 coreutils-common-9.11-6.fc45.x86_64 cpio-2.15-10.fc45.x86_64 crypto-policies-20260713-2.gitc42da77.fc45.noarch curl-8.21.0-5.fc45.x86_64 cyrus-sasl-lib-2.1.28-37.fc45.x86_64 debugedit-5.3-3.fc45.x86_64 diffutils-3.12-6.fc45.x86_64 dwz-0.17-3.fc45.x86_64 ed-1.22.6-1.fc45.x86_64 efi-srpm-macros-6-9.fc45.noarch elfutils-0.196-1.fc45.x86_64 elfutils-debuginfod-client-0.196-1.fc45.x86_64 elfutils-libelf-0.196-1.fc45.x86_64 elfutils-libs-0.196-1.fc45.x86_64 erlang-srpm-macros-0.3.11-2.fc45.noarch fedora-gpg-keys-45-0.6.noarch fedora-release-45-0.10.noarch fedora-release-common-45-0.10.noarch fedora-release-identity-basic-45-0.10.noarch fedora-repos-45-0.6.noarch file-5.48-3.fc45.x86_64 file-libs-5.48-3.fc45.x86_64 filesystem-3.18-59.fc45.x86_64 filesystem-srpm-macros-3.18-59.fc45.noarch findutils-4.11.0-2.fc45.x86_64 fips-provider-1.5.2-3.fc45.x86_64 fonts-srpm-macros-5.0.0-4.fc45.noarch forge-srpm-macros-0.4.0-5.fc45.noarch fpc-srpm-macros-1.3-17.fc45.noarch gap-srpm-macros-2-3.fc45.noarch gawk-5.4.1-1.fc45.x86_64 gdb-minimal-17.2-6.fc45.x86_64 gdbm-libs-1.23-12.fc45.x86_64 ghc-srpm-macros-1.10-2.fc45.noarch glibc-2.44-1.fc45.x86_64 glibc-common-2.44-1.fc45.x86_64 glibc-gconv-extra-2.44-1.fc45.x86_64 glibc-minimal-langpack-2.44-1.fc45.x86_64 gmp-6.3.0-6.fc45.x86_64 gnat-srpm-macros-7-3.fc45.noarch gnome-srpm-macros-1.0-2.fc45.noarch gnulib-l10n-20241231-4.fc45.noarch gnupg2-2.4.9-18.fc45.x86_64 gnupg2-dirmngr-2.4.9-18.fc45.x86_64 gnupg2-gpg-agent-2.4.9-18.fc45.x86_64 gnupg2-gpgconf-2.4.9-18.fc45.x86_64 gnupg2-keyboxd-2.4.9-18.fc45.x86_64 gnupg2-verify-2.4.9-18.fc45.x86_64 gnutls-3.8.13-3.fc45.x86_64 go-srpm-macros-3.8.0-3.fc45.noarch gpg-pubkey-4f50a6114cd5c6976a7f1179655a4b02f577861e-6888bc98 gpgverify-2.2-5.fc45.noarch grep-3.12-4.fc45.x86_64 gzip-1.14-4.fc45.x86_64 ima-evm-utils-libs-1.6.2-12.fc45.x86_64 info-7.3-3.fc45.x86_64 jansson-2.14-5.fc45.x86_64 java-srpm-macros-1-9.fc45.noarch json-c-0.18-9.fc45.x86_64 kernel-srpm-macros-1.0-30.fc45.noarch keyutils-libs-1.6.3-8.fc45.x86_64 krb5-libs-1.22.2-9.fc45.x86_64 libacl-2.4.0-2.fc45.x86_64 libarchive-3.8.8-3.fc45.x86_64 libassuan-2.5.7-6.fc45.x86_64 libattr-2.6.0-2.fc45.x86_64 libblkid-2.42.2-3.fc45.x86_64 libbrotli-1.2.0-6.fc45.x86_64 libcap-2.78-2.fc45.x86_64 libcap-ng-0.9.6-1.fc45.x86_64 libcbor-0.14.0-3.fc45.x86_64 libcom_err-1.47.4-2.fc45.x86_64 libcurl-8.21.0-5.fc45.x86_64 libeconf-0.7.9-4.fc45.x86_64 libevent-2.1.13-1.fc45.x86_64 libfdisk-2.42.2-3.fc45.x86_64 libffi-3.5.2-3.fc45.x86_64 libfido2-1.17.0-5.fc45.x86_64 libfsverity-1.7-4.fc45.x86_64 libgcc-16.2.1-2.fc45.x86_64 libgcrypt-1.12.2-2.fc45.x86_64 libgomp-16.2.1-2.fc45.x86_64 libgpg-error-1.61-2.fc45.x86_64 libidn2-2.3.8-4.fc45.x86_64 libksba-1.8.0-3.fc45.x86_64 liblastlog2-2.42.2-3.fc45.x86_64 libmount-2.42.2-3.fc45.x86_64 libnghttp2-1.69.0-5.fc45.x86_64 libnghttp3-1.18.0-1.fc45.x86_64 libpfm-4.13.0-23.fc45.x86_64 libpkgconf-2.5.1-2.fc45.x86_64 libpsl-0.23.1-1.fc45.x86_64 libselinux-3.11-5.fc45.x86_64 libselinux-utils-3.11-5.fc45.x86_64 libsemanage-3.11-4.fc45.x86_64 libsepol-3.11-2.fc45.x86_64 libsmartcols-2.42.2-3.fc45.x86_64 libssh-0.12.2-1.fc45.x86_64 libssh-config-0.12.2-1.fc45.noarch libstdc++-16.2.1-2.fc45.x86_64 libtasn1-4.21.0-2.fc45.x86_64 libtool-ltdl-2.5.4-11.fc45.x86_64 libunistring-1.1-12.fc45.x86_64 libusb1-1.0.30-2.fc45.x86_64 libuuid-2.42.2-3.fc45.x86_64 libverto-0.3.2-13.fc45.x86_64 libxcrypt-4.5.2-4.fc45.x86_64 libxml2-2.13.9-4.fc45.x86_64 libzstd-1.5.7-6.fc45.x86_64 linkdupes-0.7.3-3.fc45.x86_64 lua-libs-5.5.1-2.fc45.x86_64 lua-srpm-macros-1-18.fc45.noarch lz4-libs-1.10.0-5.fc45.x86_64 meson-srpm-macros-1.12.0-2.fc45.noarch mpfr-4.2.2-4.fc45.x86_64 ncurses-base-6.6-3.fc45.noarch ncurses-libs-6.6-3.fc45.x86_64 nettle-4.0-5.fc45.x86_64 ngtcp2-1.22.1-3.fc45.x86_64 ngtcp2-crypto-ossl-1.22.1-3.fc45.x86_64 npth-1.8-5.fc45.x86_64 ocaml-srpm-macros-11-4.fc45.noarch openblas-srpm-macros-2-22.fc45.noarch openldap-2.6.14-1.fc45.x86_64 openssl-libs-4.0.2-2.fc45.x86_64 p11-kit-0.26.5-1.fc45.x86_64 p11-kit-trust-0.26.5-1.fc45.x86_64 package-notes-srpm-macros-0.20-2.fc45.noarch pam-libs-1.7.2-4.fc45.x86_64 patch-2.8-5.fc45.x86_64 pcre2-10.47-1.fc45.2.x86_64 pcre2-syntax-10.47-1.fc45.2.noarch perl-srpm-macros-1-65.fc45.noarch pkgconf-2.5.1-2.fc45.x86_64 pkgconf-m4-2.5.1-2.fc45.noarch pkgconf-pkg-config-2.5.1-2.fc45.x86_64 policycoreutils-3.11-2.fc45.x86_64 popt-1.19-11.fc45.x86_64 publicsuffix-list-dafsa-20260624-2.fc45.noarch pyproject-srpm-macros-1.23.2-1.fc45.noarch python-srpm-macros-3.15-2.fc45.noarch qt5-srpm-macros-5.15.18-3.fc45.noarch qt6-srpm-macros-6.11.2-1.fc45.noarch readline-8.3-6.fc45.x86_64 redhat-rpm-config-345-4.fc45.noarch redhat-systemd-presets-102-3.fc45.noarch redhat-systemd-presets-common-102-3.fc45.noarch rpm-6.1.0-1.fc45.x86_64 rpm-build-6.1.0-1.fc45.x86_64 rpm-build-libs-6.1.0-1.fc45.x86_64 rpm-libs-6.1.0-1.fc45.x86_64 rpm-plugin-selinux-6.1.0-1.fc45.x86_64 rpm-sequoia-1.10.3-1.fc45.x86_64 rpm-sign-libs-6.1.0-1.fc45.x86_64 rust-srpm-macros-28.5-2.fc45.noarch sed-4.10-2.fc45.x86_64 selinux-policy-45.19-1.fc45.noarch selinux-policy-targeted-45.19-1.fc45.noarch setup-2.15.1-2.fc45.noarch shadow-utils-4.20.0-1.fc45.x86_64 sqlite-libs-3.53.4-1.fc45.x86_64 systemd-libs-262-1.fc45.x86_64 systemd-standalone-sysusers-262-1.fc45.x86_64 tar-1.35-10.fc45.x86_64 tpm2-tss-4.2.0-1.fc45.x86_64 tree-sitter-srpm-macros-0.4.6-2.fc45.noarch unzip-6.0-71.fc45.x86_64 util-linux-2.42.2-3.fc45.x86_64 util-linux-core-2.42.2-3.fc45.x86_64 which-2.25-2.fc45.x86_64 xxhash-libs-0.8.3-5.fc45.x86_64 xz-5.8.3-2.fc45.x86_64 xz-libs-5.8.3-2.fc45.x86_64 zig-srpm-macros-1-9.fc45.noarch zip-3.0-46.fc45.x86_64 zlib-ng-compat-2.3.3-6.fc45.x86_64 zstd-1.5.7-6.fc45.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1790208000 Wrote: /builddir/build/SRPMS/conglomerate-1.6.80-1.20120308git166303d.fc45.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-45-x86_64-1790274075.697241/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-clxffco_/conglomerate/conglomerate.spec) Config(child) 0 minutes 22 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/conglomerate-1.6.80-1.20120308git166303d.fc45.src.rpm) Config(fedora-45-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-45-x86_64-bootstrap-1790274075.697241/root. INFO: reusing tmpfs at /var/lib/mock/fedora-45-x86_64-bootstrap-1790274075.697241/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-45-x86_64-1790274075.697241/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-6.1.0-1.fc45.x86_64 rpm-sequoia-1.10.3-1.fc45.x86_64 dnf5-5.4.5.0-1.fc45.x86_64 dnf5-plugins-5.4.5.0-1.fc45.x86_64 Finish: chroot init Start: build phase for conglomerate-1.6.80-1.20120308git166303d.fc45.src.rpm Start: build setup for conglomerate-1.6.80-1.20120308git166303d.fc45.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1790208000 Wrote: /builddir/build/SRPMS/conglomerate-1.6.80-1.20120308git166303d.fc45.src.rpm Updating and loading repositories: updates 100% | 218.1 KiB/s | 23.6 KiB | 00m00s fedora 100% | 200.4 KiB/s | 20.2 KiB | 00m00s Copr repository 100% | 69.6 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: autoconf noarch 0:2.73-4.fc45 fedora 2.9 MiB automake noarch 0:1.18.1-5.fc45 fedora 1.8 MiB bicpl-devel x86_64 0:2.0.0-2.20260106git8be98a9.fc45 copr_base 196.8 KiB gcc x86_64 0:16.2.1-2.fc45 fedora 121.8 MiB gcc-c++ x86_64 0:16.2.1-2.fc45 fedora 46.8 MiB libminc-devel x86_64 0:2.5.0-1.fc45 fedora 367.6 KiB libtool x86_64 0:2.5.4-11.fc45 fedora 2.7 MiB make x86_64 1:4.4.1-13.fc45 fedora 1.8 MiB netcdf-devel x86_64 0:4.10.1-3.fc45 fedora 427.9 KiB perl-Getopt-Tabular noarch 0:0.3-41.fc45 fedora 86.8 KiB perl-MNI noarch 0:0.08-1.20110321git075ae53.fc45 copr_base 439.3 KiB perl-interpreter x86_64 4:5.44.0-527.fc45 fedora 119.8 KiB zlib-ng-compat-devel x86_64 0:2.3.3-6.fc45 fedora 107.0 KiB Installing dependencies: ImageMagick x86_64 1:7.1.2.31-1.fc45 fedora 88.0 KiB ImageMagick-libs x86_64 1:7.1.2.31-1.fc45 fedora 9.1 MiB LibRaw x86_64 0:0.22.2-1.fc45 fedora 2.6 MiB abattis-cantarell-vf-fonts noarch 0:0.301-18.fc45 fedora 192.7 KiB 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0:2.09-527.fc45 fedora 73.7 KiB perl-JSON-PP noarch 1:4.18-3.fc45 fedora 142.7 KiB perl-Locale-Maketext noarch 0:1.33-527.fc45 fedora 171.2 KiB perl-Locale-Maketext-Simple noarch 1:0.21-527.fc45 fedora 12.8 KiB perl-MIME-Base32 noarch 0:1.303-26.fc45 fedora 30.7 KiB perl-MIME-Base64 x86_64 0:3.16-527.fc45 fedora 41.9 KiB perl-MRO-Compat noarch 0:0.15-14.fc45 fedora 43.0 KiB perl-Math-BigInt noarch 1:2.0050.03-527.fc45 fedora 1.1 MiB perl-Math-BigInt-FastCalc x86_64 0:0.502.000-527.fc45 fedora 43.9 KiB perl-Math-Complex noarch 0:1.63-527.fc45 fedora 85.1 KiB perl-Memoize noarch 0:1.17-527.fc45 fedora 64.7 KiB perl-Module-Build noarch 2:0.42.34-11.fc45 fedora 654.2 KiB perl-Module-CoreList noarch 1:5.20260820-1.fc45 fedora 1.3 MiB perl-Module-CoreList-tools noarch 1:5.20260820-1.fc45 fedora 18.6 KiB perl-Module-Load noarch 1:0.36-527.fc45 fedora 14.9 KiB perl-Module-Load-Conditional noarch 0:0.74-527.fc45 fedora 28.7 KiB perl-Module-Loaded noarch 1:0.08-527.fc45 fedora 5.0 KiB perl-Module-Metadata noarch 0:1.000040-1.fc45 fedora 70.4 KiB perl-Module-Signature noarch 0:0.96-2.fc45 fedora 133.9 KiB perl-NDBM_File x86_64 0:1.18-527.fc45 fedora 28.3 KiB perl-NEXT noarch 0:0.69-527.fc45 fedora 23.6 KiB perl-Net noarch 0:1.04-527.fc45 fedora 22.4 KiB perl-Net-Ping noarch 0:2.77-527.fc45 fedora 135.2 KiB perl-Net-SSLeay x86_64 0:1.96-5.fc45 fedora 1.3 MiB perl-ODBM_File x86_64 0:1.20-527.fc45 fedora 28.4 KiB perl-Opcode x86_64 0:1.71-527.fc45 fedora 48.5 KiB perl-POSIX x86_64 0:2.26-527.fc45 fedora 229.3 KiB perl-Package-Generator noarch 0:1.106-36.fc45 fedora 29.9 KiB perl-Params-Check noarch 1:0.38-527.fc45 fedora 27.6 KiB perl-Params-SomeUtil x86_64 0:1.11-1.fc45 fedora 100.4 KiB perl-PathTools x86_64 0:3.95-527.fc45 fedora 180.0 KiB perl-Perl-OSType noarch 0:1.010-527.fc45 fedora 32.8 KiB perl-PerlIO-via-QuotedPrint noarch 0:0.10-527.fc45 fedora 30.3 KiB perl-Pod-Checker noarch 4:1.77-527.fc45 fedora 52.2 KiB perl-Pod-Escapes noarch 1:1.07-527.fc45 fedora 24.9 KiB perl-Pod-Functions noarch 0:1.14-527.fc45 fedora 14.4 KiB perl-Pod-Html noarch 0:1.36-527.fc45 fedora 42.3 KiB perl-Pod-Perldoc noarch 0:3.28.01-527.fc45 fedora 163.8 KiB perl-Pod-Simple noarch 1:3.48-527.fc45 fedora 565.2 KiB perl-Pod-Usage noarch 4:2.05-527.fc45 fedora 86.3 KiB perl-Safe noarch 0:2.47-527.fc45 fedora 30.7 KiB perl-Scalar-List-Utils x86_64 5:1.70-527.fc45 fedora 144.8 KiB perl-Search-Dict noarch 0:1.08-527.fc45 fedora 4.7 KiB perl-SelectSaver noarch 0:1.03-527.fc45 fedora 2.1 KiB perl-SelfLoader noarch 0:1.29-527.fc45 fedora 22.2 KiB perl-Socket x86_64 4:2.043-1.fc45 fedora 121.7 KiB perl-Software-License noarch 0:0.104007-4.fc45 fedora 500.8 KiB perl-Storable x86_64 1:3.41-527.fc45 fedora 234.9 KiB perl-Sub-Exporter noarch 0:0.992-1.fc45 fedora 194.6 KiB perl-Sub-Install noarch 0:0.929-10.fc45 fedora 35.9 KiB perl-Symbol noarch 0:1.09-527.fc45 fedora 6.8 KiB perl-Sys-Hostname x86_64 0:1.25-527.fc45 fedora 15.7 KiB perl-Sys-Syslog x86_64 0:0.36-528.fc45 fedora 94.5 KiB perl-Term-ANSIColor noarch 0:5.01-527.fc45 fedora 97.5 KiB perl-Term-Cap noarch 0:1.18-527.fc45 fedora 29.3 KiB perl-Term-Complete noarch 0:1.403-527.fc45 fedora 5.8 KiB perl-Term-ReadLine noarch 0:1.17-527.fc45 fedora 17.3 KiB perl-Term-Table noarch 0:0.028-527.fc45 fedora 78.4 KiB perl-Test noarch 0:1.31-527.fc45 fedora 37.0 KiB perl-Test-Harness noarch 1:3.52-528.fc45 fedora 560.9 KiB perl-Test-Simple noarch 3:1.302225-1.fc45 fedora 1.8 MiB perl-Text-Abbrev noarch 0:1.02-527.fc45 fedora 3.1 KiB perl-Text-Balanced noarch 0:2.07-527.fc45 fedora 111.2 KiB perl-Text-Diff noarch 0:1.45-26.fc45 fedora 83.0 KiB perl-Text-Glob noarch 0:0.11-28.fc45 fedora 8.4 KiB perl-Text-ParseWords noarch 0:3.31-527.fc45 fedora 13.6 KiB perl-Text-Tabs+Wrap noarch 0:2024.001-527.fc45 fedora 22.6 KiB perl-Text-Template noarch 0:1.61-10.fc45 fedora 112.4 KiB perl-Thread noarch 0:3.06-527.fc45 fedora 12.1 KiB perl-Thread-Queue noarch 0:3.14-527.fc45 fedora 28.9 KiB perl-Thread-Semaphore noarch 0:2.13-527.fc45 fedora 10.0 KiB perl-Tie noarch 0:4.6-527.fc45 fedora 32.1 KiB perl-Tie-File noarch 0:1.10-527.fc45 fedora 85.6 KiB perl-Tie-Memoize noarch 0:1.1-527.fc45 fedora 6.2 KiB perl-Tie-RefHash noarch 0:1.41-527.fc45 fedora 35.9 KiB perl-Time noarch 0:1.04-527.fc45 fedora 9.8 KiB perl-Time-HiRes x86_64 4:1.9780-527.fc45 fedora 115.6 KiB perl-Time-Local noarch 2:1.350-527.fc45 fedora 69.0 KiB perl-Time-Piece x86_64 0:1.4100-527.fc45 fedora 88.7 KiB perl-URI noarch 0:5.37-1.fc45 fedora 275.5 KiB perl-Unicode-Collate x86_64 0:1.31-527.fc45 fedora 4.2 MiB perl-Unicode-Normalize x86_64 0:1.32-527.fc45 fedora 486.1 KiB perl-Unicode-UCD noarch 0:0.83-527.fc45 fedora 206.4 KiB perl-User-pwent noarch 0:1.05-527.fc45 fedora 17.1 KiB perl-autodie noarch 0:2.37-527.fc45 fedora 214.9 KiB perl-autouse noarch 0:1.11-527.fc45 fedora 5.9 KiB perl-base noarch 0:2.27-527.fc45 fedora 12.6 KiB perl-bignum noarch 0:0.67-528.fc45 fedora 133.2 KiB perl-blib noarch 0:1.07-527.fc45 fedora 3.2 KiB perl-constant noarch 0:1.33-528.fc45 fedora 26.3 KiB perl-debugger noarch 0:1.60-527.fc45 fedora 403.4 KiB perl-deprecate noarch 0:0.04-527.fc45 fedora 6.6 KiB perl-devel x86_64 4:5.44.0-527.fc45 fedora 4.1 MiB perl-diagnostics noarch 0:1.40-527.fc45 fedora 483.8 KiB perl-doc noarch 0:5.44.0-527.fc45 fedora 11.7 MiB perl-encoding x86_64 4:3.00-527.fc45 fedora 150.4 KiB perl-encoding-warnings noarch 0:0.14-527.fc45 fedora 10.1 KiB perl-experimental noarch 0:0.036-527.fc45 fedora 43.4 KiB perl-fields noarch 0:2.27-527.fc45 fedora 11.9 KiB perl-filetest noarch 0:1.03-527.fc45 fedora 6.4 KiB perl-if noarch 0:0.61.000-527.fc45 fedora 5.8 KiB perl-inc-latest noarch 2:0.500-33.fc45 fedora 34.6 KiB perl-less noarch 0:0.03-527.fc45 fedora 4.9 KiB perl-lib x86_64 0:0.65-527.fc45 fedora 8.5 KiB perl-libnet noarch 0:3.15-528.fc45 fedora 288.4 KiB perl-libnetcfg noarch 4:5.44.0-527.fc45 fedora 16.9 KiB perl-libs x86_64 4:5.44.0-527.fc45 fedora 12.0 MiB perl-local-lib noarch 0:2.000029-12.fc45 fedora 117.6 KiB perl-locale noarch 0:1.13-527.fc45 fedora 6.1 KiB perl-macros noarch 4:5.44.0-527.fc45 fedora 5.5 KiB perl-meta-notation noarch 0:5.44.0-527.fc45 fedora 2.0 KiB perl-mro x86_64 0:1.30-527.fc45 fedora 41.4 KiB perl-open noarch 0:1.13-527.fc45 fedora 11.3 KiB perl-overload noarch 0:1.40-527.fc45 fedora 71.6 KiB perl-overloading noarch 0:0.03-527.fc45 fedora 4.8 KiB perl-parent noarch 1:0.244-527.fc45 fedora 10.3 KiB perl-perlfaq noarch 0:5.20250619-527.fc45 fedora 733.5 KiB perl-ph x86_64 0:5.44.0-527.fc45 fedora 279.3 KiB perl-podlators noarch 1:6.1.1-1.fc45 fedora 327.2 KiB perl-sigtrap noarch 0:1.10-527.fc45 fedora 11.1 KiB perl-sort noarch 0:2.06-527.fc45 fedora 4.8 KiB perl-subs noarch 0:1.04-527.fc45 fedora 2.1 KiB perl-threads x86_64 1:2.45-527.fc45 fedora 110.8 KiB perl-threads-shared x86_64 0:1.73-527.fc45 fedora 79.5 KiB perl-utils noarch 0:5.44.0-527.fc45 fedora 97.0 KiB perl-vars noarch 0:1.05-527.fc45 fedora 3.9 KiB perl-version x86_64 9:0.99.34-527.fc45 fedora 132.7 KiB perl-vmsish noarch 0:1.04-527.fc45 fedora 6.6 KiB pixman x86_64 0:0.46.2-4.fc45 fedora 718.3 KiB publicsuffix-list noarch 0:20260624-2.fc45 fedora 345.9 KiB python-pip-wheel noarch 0:26.1.2-5.fc45 fedora 1.2 MiB python3 x86_64 0:3.15.0~rc2-1.fc45 fedora 28.7 KiB python3-libs x86_64 0:3.15.0~rc2-1.fc45 fedora 48.2 MiB python3-pyparsing noarch 0:3.1.2-18.fc45 fedora 1.0 MiB rav1e-libs x86_64 0:0.8.1-4.fc45 fedora 3.0 MiB rhash x86_64 0:1.4.5-5.fc45 fedora 354.8 KiB shared-mime-info x86_64 0:2.5.1-2.fc45 fedora 6.6 MiB snappy x86_64 0:1.2.2-6.fc45 fedora 79.9 KiB svt-av1-libs x86_64 0:3.1.2-3.fc45 fedora 5.6 MiB systemtap-sdt-devel x86_64 0:5.6~pre17846435g2da140e3-2.fc45 fedora 189.2 KiB systemtap-sdt-dtrace x86_64 0:5.6~pre17846435g2da140e3-2.fc45 fedora 185.8 KiB tzdata noarch 0:2026c-2.fc45 fedora 1.2 MiB urw-base35-bookman-fonts noarch 0:20200910-29.fc45 fedora 1.4 MiB urw-base35-c059-fonts noarch 0:20200910-29.fc45 fedora 1.4 MiB urw-base35-d050000l-fonts noarch 0:20200910-29.fc45 fedora 84.3 KiB urw-base35-fonts noarch 0:20200910-29.fc45 fedora 5.3 KiB urw-base35-fonts-common noarch 0:20200910-29.fc45 fedora 37.4 KiB urw-base35-gothic-fonts noarch 0:20200910-29.fc45 fedora 1.2 MiB urw-base35-nimbus-mono-ps-fonts noarch 0:20200910-29.fc45 fedora 1.0 MiB urw-base35-nimbus-roman-fonts noarch 0:20200910-29.fc45 fedora 1.4 MiB urw-base35-nimbus-sans-fonts noarch 0:20200910-29.fc45 fedora 2.4 MiB urw-base35-p052-fonts noarch 0:20200910-29.fc45 fedora 1.5 MiB urw-base35-standard-symbols-ps-fonts noarch 0:20200910-29.fc45 fedora 64.9 KiB urw-base35-z003-fonts noarch 0:20200910-29.fc45 fedora 390.8 KiB vim-filesystem noarch 2:9.2.1119-1.fc45 fedora 40.0 B xml-common noarch 0:0.6.3-69.fc45 fedora 78.4 KiB Transaction Summary: Installing: 399 packages Total size of inbound packages is 230 MiB. Need to download 230 MiB. After this operation, 737 MiB extra will be used (install 737 MiB, remove 0 B). [ 1/399] automake-0:1.18.1-5.fc45.noar 100% | 54.4 MiB/s | 723.9 KiB | 00m00s [ 2/399] autoconf-0:2.73-4.fc45.noarch 100% | 41.4 MiB/s | 848.1 KiB | 00m00s [ 3/399] make-1:4.4.1-13.fc45.x86_64 100% | 95.8 MiB/s | 588.3 KiB | 00m00s [ 4/399] libtool-0:2.5.4-11.fc45.x86_6 100% | 30.4 MiB/s | 621.6 KiB | 00m00s [ 5/399] perl-Getopt-Tabular-0:0.3-41. 100% | 6.4 MiB/s | 46.1 KiB | 00m00s [ 6/399] perl-interpreter-4:5.44.0-527 100% | 23.7 MiB/s | 72.7 KiB | 00m00s [ 7/399] perl-MNI-0:0.08-1.20110321git 100% | 32.1 MiB/s | 164.4 KiB | 00m00s [ 8/399] bicpl-devel-0:2.0.0-2.2026010 100% | 2.9 MiB/s | 38.5 KiB | 00m00s [ 9/399] libminc-devel-0:2.5.0-1.fc45. 100% | 11.4 MiB/s | 81.6 KiB | 00m00s [ 10/399] netcdf-devel-0:4.10.1-3.fc45. 100% | 18.3 MiB/s | 112.3 KiB | 00m00s [ 11/399] zlib-ng-compat-devel-0:2.3.3- 100% | 6.2 MiB/s | 37.8 KiB | 00m00s [ 12/399] emacs-filesystem-1:30.2-3.fc4 100% | 2.6 MiB/s | 8.1 KiB | 00m00s [ 13/399] gcc-c++-0:16.2.1-2.fc45.x86_6 100% | 240.3 MiB/s | 17.3 MiB | 00m00s [ 14/399] m4-0:1.4.21-3.fc45.x86_64 100% | 9.2 MiB/s | 347.2 KiB | 00m00s [ 15/399] perl-Carp-0:1.54-527.fc45.noa 100% | 9.3 MiB/s | 28.6 KiB | 00m00s [ 16/399] perl-Class-Struct-0:0.68-527. 100% | 7.1 MiB/s | 21.8 KiB | 00m00s [ 17/399] perl-Data-Dumper-0:2.192-528. 100% | 18.4 MiB/s | 56.4 KiB | 00m00s [ 18/399] perl-Errno-0:1.39-527.fc45.x8 100% | 7.1 MiB/s | 14.6 KiB | 00m00s [ 19/399] gcc-0:16.2.1-2.fc45.x86_64 100% | 255.9 MiB/s | 43.2 MiB | 00m00s [ 20/399] perl-Exporter-0:5.79-527.fc45 100% | 784.9 KiB/s | 30.6 KiB | 00m00s [ 21/399] perl-File-Basename-0:2.86-527 100% | 431.9 KiB/s | 16.8 KiB | 00m00s [ 22/399] perl-File-Compare-0:1.100.800 100% | 3.2 MiB/s | 12.9 KiB | 00m00s [ 23/399] perl-File-Copy-0:2.43-527.fc4 100% | 4.8 MiB/s | 19.7 KiB | 00m00s [ 24/399] perl-File-Find-0:1.44-527.fc4 100% | 4.9 MiB/s | 25.0 KiB | 00m00s [ 25/399] perl-File-Temp-1:0.231.200-52 100% | 11.6 MiB/s | 59.3 KiB | 00m00s [ 26/399] perl-File-stat-0:1.15-527.fc4 100% | 3.4 MiB/s | 17.2 KiB | 00m00s [ 27/399] perl-Getopt-Long-1:2.58-527.f 100% | 12.3 MiB/s | 63.2 KiB | 00m00s [ 28/399] perl-IO-0:1.56-527.fc45.x86_6 100% | 20.3 MiB/s | 83.0 KiB | 00m00s [ 29/399] perl-POSIX-0:2.26-527.fc45.x8 100% | 13.5 MiB/s | 96.6 KiB | 00m00s [ 30/399] perl-PathTools-0:3.95-527.fc4 100% | 12.3 MiB/s | 88.0 KiB | 00m00s [ 31/399] perl-Text-ParseWords-0:3.31-5 100% | 4.0 MiB/s | 16.2 KiB | 00m00s [ 32/399] perl-constant-0:1.33-528.fc45 100% | 5.5 MiB/s | 22.7 KiB | 00m00s [ 33/399] perl-File-Path-0:2.18-527.fc4 100% | 8.5 MiB/s | 34.8 KiB | 00m00s [ 34/399] perl-Thread-Queue-0:3.14-527. 100% | 4.1 MiB/s | 21.0 KiB | 00m00s [ 35/399] perl-threads-1:2.45-527.fc45. 100% | 14.1 MiB/s | 57.8 KiB | 00m00s [ 36/399] perl-vars-0:1.05-527.fc45.noa 100% | 1.5 MiB/s | 12.7 KiB | 00m00s [ 37/399] libmpc-0:1.4.1-2.fc45.x86_64 100% | 6.7 MiB/s | 75.7 KiB | 00m00s [ 38/399] perl-AutoLoader-0:5.74-527.fc 100% | 4.1 MiB/s | 20.9 KiB | 00m00s [ 39/399] perl-Sys-Hostname-0:1.25-527. 100% | 3.3 MiB/s | 16.7 KiB | 00m00s [ 40/399] minc-tools-0:2.3.2-7.20260106 100% | 89.1 MiB/s | 365.1 KiB | 00m00s [ 41/399] perl-libs-4:5.44.0-527.fc45.x 100% | 146.6 MiB/s | 2.6 MiB | 00m00s [ 42/399] bicpl-0:2.0.0-2.20260106git8b 100% | 19.2 MiB/s | 411.8 KiB | 00m00s [ 43/399] cmake-filesystem-0:4.3.0-5.fc 100% | 1.5 MiB/s | 14.9 KiB | 00m00s [ 44/399] hdf5-devel-0:2.1.1-5.fc45.x86 100% | 83.9 MiB/s | 1.5 MiB | 00m00s [ 45/399] libminc-0:2.5.0-1.fc45.x86_64 100% | 25.7 MiB/s | 289.1 KiB | 00m00s [ 46/399] cpp-0:16.2.1-2.fc45.x86_64 100% | 144.5 MiB/s | 14.6 MiB | 00m00s [ 47/399] nifticlib-devel-0:3.0.1-6.fc4 100% | 3.6 MiB/s | 58.3 KiB | 00m00s [ 48/399] libcurl-devel-0:8.21.0-5.fc45 100% | 69.5 MiB/s | 996.0 KiB | 00m00s [ 49/399] netcdf-0:4.10.1-3.fc45.x86_64 100% | 57.7 MiB/s | 886.5 KiB | 00m00s [ 50/399] cmake-0:4.3.0-5.fc45.x86_64 100% | 150.1 MiB/s | 14.4 MiB | 00m00s [ 51/399] perl-B-0:1.92-527.fc45.x86_64 100% | 9.9 MiB/s | 181.8 KiB | 00m00s [ 52/399] perl-Scalar-List-Utils-5:1.70 100% | 4.3 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16.1 MiB/s | 132.0 KiB | 00m00s [ 66/399] hdf5-0:2.1.1-5.fc45.x86_64 100% | 112.0 MiB/s | 2.4 MiB | 00m00s [ 67/399] jsoncpp-0:1.9.6-3.fc44.x86_64 100% | 15.3 MiB/s | 110.0 KiB | 00m00s [ 68/399] cmake-data-0:4.3.0-5.fc45.noa 100% | 116.5 MiB/s | 2.7 MiB | 00m00s [ 69/399] libuv-1:1.52.1-2.fc45.x86_64 100% | 44.6 MiB/s | 274.1 KiB | 00m00s [ 70/399] rhash-0:1.4.5-5.fc45.x86_64 100% | 24.6 MiB/s | 201.7 KiB | 00m00s [ 71/399] libaec-devel-0:1.1.7-2.fc45.x 100% | 3.8 MiB/s | 15.4 KiB | 00m00s [ 72/399] nifticlib-0:3.0.1-6.fc45.x86_ 100% | 35.2 MiB/s | 252.0 KiB | 00m00s [ 73/399] blosc-0:1.21.6-12.fc45.x86_64 100% | 9.6 MiB/s | 59.1 KiB | 00m00s [ 74/399] libaec-0:1.1.7-2.fc45.x86_64 100% | 6.1 MiB/s | 37.3 KiB | 00m00s [ 75/399] libzip-0:1.11.4-5.fc45.x86_64 100% | 14.5 MiB/s | 74.4 KiB | 00m00s [ 76/399] perl-overloading-0:0.03-527.f 100% | 2.4 MiB/s | 12.5 KiB | 00m00s [ 77/399] perl-if-0:0.61.000-527.fc45.n 100% | 2.2 MiB/s | 13.7 KiB | 00m00s [ 78/399] perl-mro-0:1.30-527.fc45.x86_ 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perl-Config-Perl-V-0:0.40-1.f 100% | 7.1 MiB/s | 21.7 KiB | 00m00s [ 92/399] perl-CPAN-0:2.38-528.fc45.noa 100% | 12.3 MiB/s | 569.0 KiB | 00m00s [ 93/399] perl-DBM_Filter-0:0.07-527.fc 100% | 3.4 MiB/s | 27.5 KiB | 00m00s [ 94/399] perl-Devel-PPPort-0:3.73-527. 100% | 30.6 MiB/s | 219.3 KiB | 00m00s [ 95/399] perl-DB_File-0:1.860-4.fc45.x 100% | 9.9 MiB/s | 81.0 KiB | 00m00s [ 96/399] perl-Devel-SelfStubber-0:1.06 100% | 2.7 MiB/s | 14.0 KiB | 00m00s [ 97/399] perl-Devel-Peek-0:1.36-527.fc 100% | 4.4 MiB/s | 31.6 KiB | 00m00s [ 98/399] perl-Digest-0:1.20-527.fc45.n 100% | 4.0 MiB/s | 24.8 KiB | 00m00s [ 99/399] perl-Digest-MD5-0:2.59-527.fc 100% | 6.9 MiB/s | 35.6 KiB | 00m00s [100/399] perl-Digest-SHA-1:6.04-528.fc 100% | 11.9 MiB/s | 61.1 KiB | 00m00s [101/399] perl-DirHandle-0:1.05-527.fc4 100% | 1.7 MiB/s | 12.1 KiB | 00m00s [102/399] gcc-gfortran-0:16.2.1-2.fc45. 100% | 116.3 MiB/s | 16.3 MiB | 00m00s [103/399] perl-English-0:1.12-527.fc45. 100% | 829.8 KiB/s | 13.3 KiB | 00m00s 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24.6 MiB/s | 100.6 KiB | 00m00s [169/399] perl-SelfLoader-0:1.29-527.fc 100% | 2.1 MiB/s | 21.1 KiB | 00m00s [170/399] perl-Term-ANSIColor-0:5.01-52 100% | 11.6 MiB/s | 47.3 KiB | 00m00s [171/399] perl-Term-Cap-0:1.18-527.fc45 100% | 7.1 MiB/s | 21.7 KiB | 00m00s [172/399] perl-Term-Complete-0:1.403-52 100% | 1.8 MiB/s | 12.7 KiB | 00m00s [173/399] perl-Term-ReadLine-0:1.17-527 100% | 4.6 MiB/s | 18.7 KiB | 00m00s [174/399] perl-Term-Table-0:0.028-527.f 100% | 10.6 MiB/s | 43.6 KiB | 00m00s [175/399] perl-Test-Harness-1:3.52-528. 100% | 69.0 MiB/s | 282.8 KiB | 00m00s [176/399] perl-Test-0:1.31-527.fc45.noa 100% | 4.6 MiB/s | 28.2 KiB | 00m00s [177/399] perl-Test-Simple-3:1.302225-1 100% | 111.4 MiB/s | 912.8 KiB | 00m00s [178/399] perl-Text-Abbrev-0:1.02-527.f 100% | 2.3 MiB/s | 11.8 KiB | 00m00s [179/399] perl-Text-Balanced-0:2.07-527 100% | 5.9 MiB/s | 48.4 KiB | 00m00s [180/399] perl-Text-Tabs+Wrap-0:2024.00 100% | 3.5 MiB/s | 21.5 KiB | 00m00s [181/399] perl-Thread-0:3.06-527.fc45.n 100% | 2.2 MiB/s | 17.7 KiB | 00m00s [182/399] perl-Tie-0:4.6-527.fc45.noarc 100% | 6.8 MiB/s | 28.0 KiB | 00m00s [183/399] perl-Thread-Semaphore-0:2.13- 100% | 1.7 MiB/s | 15.3 KiB | 00m00s [184/399] perl-Tie-File-0:1.10-527.fc45 100% | 5.2 MiB/s | 42.9 KiB | 00m00s [185/399] perl-Tie-RefHash-0:1.41-527.f 100% | 7.6 MiB/s | 23.3 KiB | 00m00s [186/399] perl-Tie-Memoize-0:1.1-527.fc 100% | 1.9 MiB/s | 13.8 KiB | 00m00s [187/399] perl-Time-HiRes-4:1.9780-527. 100% | 11.1 MiB/s | 56.8 KiB | 00m00s [188/399] perl-Time-Local-2:1.350-527.f 100% | 6.7 MiB/s | 34.2 KiB | 00m00s [189/399] perl-Time-Piece-0:1.4100-527. 100% | 6.5 MiB/s | 46.6 KiB | 00m00s [190/399] perl-Time-0:1.04-527.fc45.noa 100% | 1.2 MiB/s | 16.7 KiB | 00m00s [191/399] perl-Unicode-Collate-0:1.31-5 100% | 63.0 MiB/s | 645.0 KiB | 00m00s [192/399] perl-Unicode-Normalize-0:1.32 100% | 14.4 MiB/s | 73.8 KiB | 00m00s [193/399] perl-Unicode-UCD-0:0.83-527.f 100% | 15.4 MiB/s | 79.1 KiB | 00m00s 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[371/401] Installing perl-Text-Template 100% | 111.3 MiB/s | 114.0 KiB | 00m00s [372/401] Installing perl-MRO-Compat-0: 100% | 43.8 MiB/s | 44.9 KiB | 00m00s [373/401] Installing perl-Package-Gener 100% | 0.0 B/s | 31.5 KiB | 00m00s [374/401] Installing perl-Sub-Exporter- 100% | 196.9 MiB/s | 201.7 KiB | 00m00s [375/401] Installing perl-Data-Section- 100% | 43.0 MiB/s | 44.1 KiB | 00m00s [376/401] Installing perl-Software-Lice 100% | 167.1 MiB/s | 513.2 KiB | 00m00s [377/401] Installing perl-Module-Build- 100% | 34.1 MiB/s | 663.2 KiB | 00m00s [378/401] Installing perl-CPAN-0:2.38-5 100% | 90.3 MiB/s | 1.9 MiB | 00m00s [379/401] Installing perl-4:5.44.0-527. 100% | 0.0 B/s | 124.0 B | 00m00s [380/401] Installing snappy-0:1.2.2-6.f 100% | 79.6 MiB/s | 81.6 KiB | 00m00s [381/401] Installing blosc-0:1.21.6-12. 100% | 125.9 MiB/s | 128.9 KiB | 00m00s [382/401] Installing netcdf-0:4.10.1-3. 100% | 111.6 MiB/s | 2.6 MiB | 00m00s [383/401] Installing libminc-0:2.5.0-1. 100% | 237.0 MiB/s | 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libtool-0:2.5.4-11 100% | 130.8 MiB/s | 2.7 MiB | 00m00s [397/401] Installing bicpl-devel-0:2.0. 100% | 198.3 MiB/s | 203.0 KiB | 00m00s [398/401] Installing perl-MNI-0:0.08-1. 100% | 147.4 MiB/s | 452.8 KiB | 00m00s [399/401] Installing perl-Getopt-Tabula 100% | 86.0 MiB/s | 88.1 KiB | 00m00s [400/401] Installing annobin-plugin-gcc 100% | 53.4 MiB/s | 711.1 KiB | 00m00s [401/401] Installing gcc-plugin-annobin 100% | 125.3 KiB/s | 58.5 KiB | 00m00s Warning: skipped OpenPGP checks for 4 packages from repository: copr_base Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1790208000 Wrote: /builddir/build/SRPMS/conglomerate-1.6.80-1.20120308git166303d.fc45.src.rpm Updating and loading repositories: updates 100% | 100.7 KiB/s | 23.6 KiB | 00m00s fedora 100% | 91.6 KiB/s | 20.2 KiB | 00m00s Copr repository 100% | 153.1 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package "autoconf-2.73-4.fc45.noarch" is already installed. Package "automake-1.18.1-5.fc45.noarch" is already installed. Package "bicpl-devel-2.0.0-2.20260106git8be98a9.fc45.x86_64" is already installed. Package "gcc-16.2.1-2.fc45.x86_64" is already installed. Package "gcc-c++-16.2.1-2.fc45.x86_64" is already installed. Package "libminc-devel-2.5.0-1.fc45.x86_64" is already installed. Package "libtool-2.5.4-11.fc45.x86_64" is already installed. Package "make-1:4.4.1-13.fc45.x86_64" is already installed. Package "netcdf-devel-4.10.1-3.fc45.x86_64" is already installed. Package "perl-Getopt-Tabular-0.3-41.fc45.noarch" is already installed. Package "perl-MNI-0.08-1.20110321git075ae53.fc45.noarch" is already installed. Package "perl-interpreter-4:5.44.0-527.fc45.x86_64" is already installed. Package "zlib-ng-compat-devel-2.3.3-6.fc45.x86_64" is already installed. Nothing to do. Finish: build setup for conglomerate-1.6.80-1.20120308git166303d.fc45.src.rpm Start: rpmbuild conglomerate-1.6.80-1.20120308git166303d.fc45.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1790208000 Executing(mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.FH8e5X Creating(rpmbuild.env): /builddir/build/BUILD/conglomerate-1.6.80-build/rpmbuild.env RPM_SOURCE_DIR="/builddir/build/SOURCES" RPM_BUILD_DIR="/builddir/build/BUILD/conglomerate-1.6.80-build" RPM_OPT_FLAGS="-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer" RPM_LD_FLAGS="-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes " RPM_ARCH="x86_64" RPM_OS="linux" RPM_BUILD_NCPUS="4" RPM_SPECPARTS_DIR="/builddir/build/BUILD/conglomerate-1.6.80-build/SPECPARTS" export RPM_SOURCE_DIR RPM_BUILD_DIR RPM_OPT_FLAGS RPM_ARCH RPM_OS RPM_BUILD_NCPUS RPM_SPECPARTS_DIR RPM_LD_FLAGS RPM_DOC_DIR="/usr/share/doc" export RPM_DOC_DIR RPM_PACKAGE_NAME="conglomerate" RPM_PACKAGE_VERSION="1.6.80" RPM_PACKAGE_RELEASE="1.20120308git166303d.fc45" export RPM_PACKAGE_NAME RPM_PACKAGE_VERSION RPM_PACKAGE_RELEASE LANG=C.UTF-8 export LANG unset CDPATH DISPLAY ||: unset DEBUGINFOD_URLS ||: unset RPM_CONFIG_DIR ||: RPM_BUILD_ROOT="/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT" export RPM_BUILD_ROOT PKG_CONFIG_PATH="${PKG_CONFIG_PATH}:/usr/lib64/pkgconfig:/usr/share/pkgconfig" export PKG_CONFIG_PATH CONFIG_SITE=${CONFIG_SITE:-NONE} export CONFIG_SITE Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.Ql4tId + umask 022 + cd /builddir/build/BUILD/conglomerate-1.6.80-build + cd /builddir/build/BUILD/conglomerate-1.6.80-build + rm -rf conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b + /usr/bin/rpmuncompress -x /builddir/build/SOURCES/conglomerate-166303d.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + mkdir -p m4 + tar -xf /builddir/build/SOURCES/mni-acmacros.tar.gz --strip-components=1 -C m4 + test -f m4/smr_WITH_BUILD_PATH.m4 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.zRdViE + umask 022 + cd /builddir/build/BUILD/conglomerate-1.6.80-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b + sed -i 's/^dnl AC_PROG_CXX$/AC_PROG_CXX/' configure.ac + grep -q '^AC_PROG_CXX$' configure.ac + autoreconf -ifv -I m4 autoreconf: export WARNINGS= autoreconf: Entering directory '.' autoreconf: configure.ac: no obvious need to run autopoint autoreconf: running: aclocal -I m4 --force -I m4 autoreconf: configure.ac: tracing autoreconf: running: libtoolize --copy --force libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac, libtoolize: and rerunning libtoolize and aclocal. autoreconf: configure.ac: not using Intltool autoreconf: configure.ac: not using Gtkdoc autoreconf: configure.ac: no need to run autopoint (confirmed) autoreconf: running: aclocal -I m4 --force -I m4 autoreconf: running: /usr/bin/autoconf --include=m4 --force configure.ac:19: warning: The macro 'AC_PROG_LIBTOOL' is obsolete. configure.ac:19: You should run autoupdate. m4/libtool.m4:100: AC_PROG_LIBTOOL is expanded from... configure.ac:19: the top level configure.ac:21: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:21: You should run autoupdate. ./lib/autoconf/general.m4:2976: AC_TRY_LINK is expanded from... m4/mni_REQUIRE_LIB.m4:7: mni_REQUIRE_LIB is expanded from... m4/mni_REQUIRE_MNILIBS.m4:1: mni_REQUIRE_MINC is expanded from... m4/mni_REQUIRE_MNILIBS.m4:21: mni_REQUIRE_VOLUMEIO is expanded from... m4/mni_REQUIRE_MNILIBS.m4:39: mni_REQUIRE_BICPL is expanded from... configure.ac:21: the top level configure.ac:21: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:21: You should run autoupdate. ./lib/autoconf/general.m4:2976: AC_TRY_LINK is expanded from... m4/mni_REQUIRE_LIB.m4:7: mni_REQUIRE_LIB is expanded from... m4/mni_REQUIRE_MNILIBS.m4:21: mni_REQUIRE_VOLUMEIO is expanded from... m4/mni_REQUIRE_MNILIBS.m4:39: mni_REQUIRE_BICPL is expanded from... configure.ac:21: the top level configure.ac:21: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:21: You should run autoupdate. ./lib/autoconf/general.m4:2976: AC_TRY_LINK is expanded from... m4/mni_REQUIRE_LIB.m4:7: mni_REQUIRE_LIB is expanded from... m4/mni_REQUIRE_MNILIBS.m4:39: mni_REQUIRE_BICPL is expanded from... configure.ac:21: the top level configure.ac:24: warning: AC_OUTPUT should be used without arguments. configure.ac:24: You should run autoupdate. autoreconf: running: /usr/bin/autoheader --include=m4 --force autoreconf: running: automake --add-missing --copy --force-missing configure.ac:14: installing './compile' configure.ac:19: installing './config.guess' configure.ac:19: installing './config.sub' configure.ac:5: installing './install-sh' configure.ac:5: installing './missing' Makefile.am: installing './INSTALL' Makefile.am: installing './depcomp' autoreconf: configure.ac: not running make: --make not given autoreconf: Leaving directory '.' + sed -i s/volume_io2/minc_io/g configure + grep -q minc_io configure + cp /builddir/build/SOURCES/mni-volume-io-compat.h compat_minc.h + mkdir -p compat/volume_io + cat ++ pwd ++ pwd + export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS' ++ pwd ++ pwd + export 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + '[' '-flto=auto -ffat-lto-objectsx' '!=' x ']' ++ find . -type f -name configure -print + for file in $(find . -type f -name configure -print) + /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup '/lt_cv_sys_global_symbol_to_cdecl=/s#(".*"|'\''.*'\'')#"sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./configure + diff -u ./configure.backup ./configure --- ./configure.backup 2026-09-24 18:21:56.728274259 +0000 +++ ./configure 2026-09-24 18:21:56.765274160 +0000 @@ -7820,7 +7820,7 @@ # Transform an extracted symbol line into a proper C declaration. # Some systems (esp. on ia64) link data and code symbols differently, # so use this general approach. -lt_cv_sys_global_symbol_to_cdecl="$SED -n"\ +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'"\ $lt_cdecl_hook\ " -e 's/^T .* \(.*\)$/extern int \1();/p'"\ " -e 's/^$symcode$symcode* .* \(.*\)$/extern char \1;/p'" @@ -19379,7 +19379,7 @@ compiler='`$ECHO "$compiler" | $SED "$delay_single_quote_subst"`' GCC='`$ECHO "$GCC" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_pipe='`$ECHO "$lt_cv_sys_global_symbol_pipe" | $SED "$delay_single_quote_subst"`' -lt_cv_sys_global_symbol_to_cdecl='`$ECHO "$lt_cv_sys_global_symbol_to_cdecl" | $SED "$delay_single_quote_subst"`' +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'" lt_cv_sys_global_symbol_to_import='`$ECHO "$lt_cv_sys_global_symbol_to_import" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_to_c_name_address='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address_lib_prefix" | $SED "$delay_single_quote_subst"`' + '[' 1 = 1 ']' +++ dirname ./configure ++ find . -name config.guess -o -name config.sub + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./config.sub + '[' -f /usr/lib/rpm/redhat/config.sub ']' + /usr/bin/rm -f ./config.sub ++ basename ./config.sub + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./config.sub '/usr/lib/rpm/redhat/config.sub' -> './config.sub' + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./config.guess + '[' -f /usr/lib/rpm/redhat/config.guess ']' + /usr/bin/rm -f ./config.guess ++ basename ./config.guess + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./config.guess '/usr/lib/rpm/redhat/config.guess' -> './config.guess' + '[' 1 = 1 ']' + '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors' ']' ++ find . -name ltmain.sh + for i in $(find . -name ltmain.sh) + /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors"~' ./ltmain.sh ++ grep -q runstatedir=DIR ./configure ++ echo --runstatedir=/run + ./configure --build=x86_64-redhat-linux --host=x86_64-redhat-linux --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/bin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --runstatedir=/run --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --with-minc2 --with-build-path=/usr 'LIBS=-lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm' checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking whether UID '1000' is supported by ustar format... yes checking whether GID '135' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking for x86_64-redhat-linux-gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C23 features... unsupported checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking dependency style of g++... none checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for float.h... yes checking build system type... x86_64-redhat-linux-gnu checking host system type... x86_64-redhat-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-redhat-linux-gnu file names to x86_64-redhat-linux-gnu format... func_convert_file_noop checking how to convert x86_64-redhat-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for x86_64-redhat-linux-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for x86_64-redhat-linux-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-redhat-linux-ranlib... no checking for ranlib... ranlib checking for x86_64-redhat-linux-ar... no checking for ar... ar checking for archiver @FILE support... @ checking for x86_64-redhat-linux-strip... no checking for strip... strip checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for x86_64-redhat-linux-mt... no checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... yes checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for library m... yes checking for library netcdf... yes checking for library z... yes checking for library hdf5... yes checking for library minc2... yes checking for library minc_io... yes checking for library bicpl... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating epm-header config.status: creating nlfit_smr config.status: creating mritotal_suppress config.status: creating smooth_mask config.status: creating compute_icbm_vols config.status: creating multispectral_stx_registration config.status: creating sphere_resample_obj config.status: creating suppress_fat config.status: creating regional_thickness config.status: creating remap_to_lobes config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands + /usr/bin/make -O -j4 V=1 VERBOSE=1 /usr/bin/make all-am make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o autocrop_volume.o autocrop_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o add_labels.o add_labels.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o apply_sphere_transform.o apply_sphere_transform.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o minc_labels.o minc_labels.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o average_voxels.o average_voxels.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o box_filter_volume.o box_filter_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o blur_surface.o blur_surface.c blur_surface.c: In function ‘main’: blur_surface.c:123:17: warning: ‘smooth_values’ may be used uninitialized [-Wmaybe-uninitialized] 123 | if( output_real( file, smooth_values[p] ) != OK || | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ blur_surface.c:31:61: note: ‘smooth_values’ was declared here 31 | Real fwhm, distance_ratio, *values, value, *smooth_values; | ^~~~~~~~~~~~~ blur_surface.c:104:30: warning: ‘value’ may be used uninitialized [-Wmaybe-uninitialized] 104 | smooth_values[p] = value; | ~~~~~~~~~~~~~~~~~^~~~~~~ blur_surface.c:31:53: note: ‘value’ was declared here 31 | Real fwhm, distance_ratio, *values, value, *smooth_values; | ^~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o chamfer_volume.o chamfer_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o chop_tags.o chop_tags.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o box_filter_volume_nd.o box_filter_volume_nd.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o clamp_volume.o clamp_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o classify_sulcus.o classify_sulcus.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o clean_surface_labels.o clean_surface_labels.c clean_surface_labels.c: In function ‘main’: clean_surface_labels.c:59:12: warning: unused variable ‘fp’ [-Wunused-variable] 59 | FILE * fp; | ^~ clean_surface_labels.c: In function ‘get_surface_neighbours’: clean_surface_labels.c:311:3: warning: multi-line comment [-Wcomment] 311 | // /\ /\ | ^ clean_surface_labels.c: In function ‘read_scalar’: clean_surface_labels.c:369:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 369 | fscanf( fp, "%f", &val ); | ^~~~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o cluster_volume.o cluster_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o coalesce_lines.o coalesce_lines.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o clip_tags.o clip_tags.c clip_tags.c: In function ‘main’: clip_tags.c:336:28: warning: ‘voxel_volume’ may be used uninitialized [-Wmaybe-uninitialized] 336 | volume += voxel_volume; | ~~~~~~~^~~~~~~~~~~~~~~ clip_tags.c:52:52: note: ‘voxel_volume’ was declared here 52 | Real min_dist, max_dist, dist, voxel_volume; | ^~~~~~~~~~~~ clip_tags.c:159:24: warning: ‘left_constant’ may be used uninitialized [-Wmaybe-uninitialized] 159 | plane_constants[0] = left_constant; | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ clip_tags.c:58:26: note: ‘left_constant’ was declared here 58 | Real left_constant, right_constant; | ^~~~~~~~~~~~~ clip_tags.c:161:24: warning: ‘right_constant’ may be used uninitialized [-Wmaybe-uninitialized] 161 | plane_constants[1] = right_constant; | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ clip_tags.c:58:41: note: ‘right_constant’ was declared here 58 | Real left_constant, right_constant; | ^~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compare_left_right.o compare_left_right.c compare_left_right.c: In function ‘main’: compare_left_right.c:235:20: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 235 | if( i == 0 && j == 0 || t_stat[i][j] < min_t ) | ~~~~~~~^~~~~~~~~ compare_left_right.c:237:20: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 237 | if( i == 0 && j == 0 || t_stat[i][j] > max_t ) | ~~~~~~~^~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compare_lengths.o compare_lengths.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o composite_images.o composite_images.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compare_left_right_groups.o compare_left_right_groups.c compare_left_right_groups.c: In function ‘main’: compare_left_right_groups.c:177:20: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 177 | if( i == 0 && j == 0 || t < min_t ) | ~~~~~~~^~~~~~~~~ compare_left_right_groups.c:179:25: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 179 | else if( i == 0 && j == 0 || t > max_t ) | ~~~~~~~^~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o close_surface.o close_surface.c close_surface.c: In function ‘label_inside_convex_hull’: close_surface.c:336:34: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 336 | if( x == 0 && y == 0 && z == 0 || voxel[c] < limits[0][c] ) | ~~~~~~~~~~~~~~~~~^~~~~~~~~ close_surface.c:340:34: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 340 | if( x == 0 && y == 0 && z == 0 || voxel[c] > limits[1][c] ) | ~~~~~~~~~~~~~~~~~^~~~~~~~~ close_surface.c: In function ‘print_convex_boundaries’: close_surface.c:881:43: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 881 | n_voxels == prev_max && i > prev_pos) ) | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o composite_minc_images.o composite_minc_images.c composite_minc_images.c: In function ‘main’: composite_minc_images.c:32:41: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 32 | !equal_strings( method, "add" ) && | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ 33 | !equal_strings( method, "composite" ) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compute_bounding_view.o compute_bounding_view.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o composite_volumes.o composite_volumes.c composite_volumes.c: In function ‘main’: composite_volumes.c:199:12: warning: ‘rgb_volume’ may be used uninitialized [-Wmaybe-uninitialized] 199 | (void) output_volume( output_filename, NC_UNSPECIFIED, FALSE, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | 0.0, 0.0, | ~~~~~~~~~ 201 | rgb_volume, "Composited\n", NULL ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ composite_volumes.c:17:32: note: ‘rgb_volume’ was declared here 17 | Volume volume, rgb_volume; | ^~~~~~~~~~ composite_volumes.c:68:9: warning: ‘coding_type’ may be used uninitialized [-Wmaybe-uninitialized] 68 | initialize_colour_coding( &colour_coding, coding_type, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | under_colour, over_colour, low, high ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ composite_volumes.c:32:26: note: ‘coding_type’ was declared here 32 | Colour_coding_types coding_type; | ^~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o concat_images.o concat_images.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o count_thresholded_volume.o count_thresholded_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o contour_slice.o contour_slice.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compute_resels.o compute_resels.c compute_resels.c: In function ‘main’: compute_resels.c:59:11: warning: ‘n_points’ may be used uninitialized [-Wmaybe-uninitialized] 59 | if( get_object_points( object_list[0], &points ) != n_points ) | ^ compute_resels.c:18:58: note: ‘n_points’ was declared here 18 | int i, n_objects, n_surfaces[2], group, n_points, s; | ^~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_2d_sheet.o create_2d_sheet.c In function ‘create_path_between_nodes’, inlined from ‘create_2d_coordinates’ at create_2d_sheet.c:162:17, inlined from ‘main’ at create_2d_sheet.c:34:5: create_2d_sheet.c:80:20: warning: ‘best_neigh’ may be used uninitialized [-Wmaybe-uninitialized] 80 | while( current != start_point ); | ~~~~~~~~^~~~~~~~~~~~~~ create_2d_sheet.c: In function ‘main’: create_2d_sheet.c:51:37: note: ‘best_neigh’ was declared here 51 | int n_path, *path, current, best_neigh, n, neigh; | ^~~~~~~~~~ In function ‘create_2d_coordinates’, inlined from ‘main’ at create_2d_sheet.c:34:5: create_2d_sheet.c:198:21: warning: ‘start_point’ may be used uninitialized [-Wmaybe-uninitialized] 198 | vertices_in_path[start_point] = TRUE; | ^ create_2d_sheet.c: In function ‘main’: create_2d_sheet.c:109:51: note: ‘start_point’ was declared here 109 | int current_point, n_points, start_point, vertex; | ^~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_box.o create_box.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_label_map.o create_label_map.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_2d_surface.o create_2d_surface.c create_2d_surface.c: In function ‘create_2d_coordinates’: create_2d_surface.c:284:32: warning: variable ‘dummy’ set but not used [-Wunused-but-set-variable=] 284 | Real x, y, z, dummy; | ^~~~~ In file included from /usr/include/volume_io.h:43, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : In function ‘create_path_between_poles’, inlined from ‘create_2d_coordinates’ at create_2d_surface.c:306:17, inlined from ‘main’ at create_2d_surface.c:37:5: create_2d_surface.c:100:9: warning: ‘best_neigh’ may be used uninitialized [-Wmaybe-uninitialized] 100 | ADD_ELEMENT_TO_ARRAY( path, n_path, current, DEFAULT_CHUNK_SIZE ); | ^~~~~~~~~~~~~~~~~~~~ create_2d_surface.c: In function ‘main’: create_2d_surface.c:73:37: note: ‘best_neigh’ was declared here 73 | int n_path, *path, current, best_neigh, n, neigh; | ^~~~~~~~~~ In function ‘create_2d_coordinates’, inlined from ‘main’ at create_2d_surface.c:37:5: create_2d_surface.c:407:35: warning: ‘best_hor’ may be used uninitialized [-Wmaybe-uninitialized] 407 | horizontal[point] = best_hor; | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ create_2d_surface.c: In function ‘main’: create_2d_surface.c:281:58: note: ‘best_hor’ was declared here 281 | float *distances, neigh_dist, best_dist, best_hor; | ^~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_four_volumes.o create_four_volumes.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o convex_hull.o convex_hull.c convex_hull.c: In function ‘get_convex_hull’: convex_hull.c:617:1: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 617 | if(dbg) printf( "EDGE ENTRY %d:%d for poly %d\n", poly_vertices[edge], | ^~ convex_hull.c:620:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 620 | ind = find_limit_plane( n_points, points, point_flags, | ^~~ convex_hull.c: In function ‘get_surface_neighbours’: convex_hull.c:908:3: warning: multi-line comment [-Wcomment] 908 | // /\ /\ | ^ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o get_filenames.o get_filenames.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_mahalanobis.o create_mahalanobis.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_landmark_full_volume.o create_landmark_full_volume.c create_landmark_full_volume.c: In function ‘is_left_id’: create_landmark_full_volume.c:31:22: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 31 | return( id >= 10 && id <= 19 || id == 30 ); | ~~~~~~~~~^~~~~~~~~~~ create_landmark_full_volume.c: In function ‘is_right_id’: create_landmark_full_volume.c:40:22: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 40 | return( id >= 20 && id <= 29 || id == 40 ); | ~~~~~~~~~^~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_surface_interpolation_lsq.o create_surface_interpolation_lsq.c create_surface_interpolation_lsq.c: In function ‘create_surface_interpolation’: create_surface_interpolation_lsq.c:277:30: warning: variable ‘n_edges’ set but not used [-Wunused-but-set-variable=] 277 | int neigh, n_edges; | ^~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dilate_volume.o dilate_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_warping_points.o create_warping_points.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o diff_mahalanobis.o diff_mahalanobis.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' diff_mahalanobis.c: In function ‘min_function’: diff_mahalanobis.c:153:59: warning: variable ‘close’ set but not used [-Wunused-but-set-variable=] 153 | Real z1, z2, diff, deriv1[3], deriv2[3], close; | ^~~~~ make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dim_image.o dim_image.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_deformation_distances.o dump_deformation_distances.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_points_to_tag_file.o dump_points_to_tag_file.c dump_points_to_tag_file.c: In function ‘main’: dump_points_to_tag_file.c:22:31: warning: format ‘%s’ expects a matching ‘char *’ argument [-Wformat=] 22 | print_error( "Usage: %s input1.obj [input2.obj] output.txt\n" ); | ~^ | | | char * make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dilate_volume_completely.o dilate_volume_completely.c dilate_volume_completely.c: In function ‘main’: dilate_volume_completely.c:104:62: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 104 | min_inside <= test_value && | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ 105 | test_value <= max_inside ) | ~~~~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_transform.o dump_transform.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_uv.o dump_uv.c dump_uv.c: In function ‘main’: dump_uv.c:22:31: warning: format ‘%s’ expects a matching ‘char *’ argument [-Wformat=] 22 | print_error( "Usage: %s input.obj output.txt\n" ); | ~^ | | | char * make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_rms.o dump_rms.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o evaluate.o evaluate.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o extract_tag_slice.o extract_tag_slice.c extract_tag_slice.c: In function ‘main’: extract_tag_slice.c:114:30: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 114 | if( !min_present && value != 0.0 || | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o fill_sulci.o fill_sulci.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o extract_largest_line.o extract_largest_line.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_image_bounding_box.o find_image_bounding_box.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_surface_distances.o find_surface_distances.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_buried_surface.o find_buried_surface.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o search_utils.o search_utils.c search_utils.c: In function ‘contains_value’: search_utils.c:114:23: warning: ‘under_found’ may be used uninitialized [-Wmaybe-uninitialized] 114 | if( under_found ) | ^ search_utils.c:88:14: note: ‘under_found’ was declared here 88 | BOOLEAN under_found, over_found; | ^~~~~~~~~~~ search_utils.c:108:23: warning: ‘over_found’ may be used uninitialized [-Wmaybe-uninitialized] 108 | if( over_found ) | ^ search_utils.c:88:27: note: ‘over_found’ was declared here 88 | BOOLEAN under_found, over_found; | ^~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_peaks.o find_peaks.c find_peaks.c: In function ‘check_for_peak’: find_peaks.c:753:10: warning: enumeration value ‘NEXTREMES’ not handled in switch [-Wswitch] 753 | switch (extreme) { | ^~~~~~ find_peaks.c:760:10: warning: enumeration value ‘NEXTREMES’ not handled in switch [-Wswitch] 760 | switch (extreme) { | ^~~~~~ find_peaks.c: At top level: find_peaks.c:58:13: warning: ‘rcsid’ defined but not used [-Wunused-variable] 58 | static char rcsid[]="$Header: /private-cvsroot/libraries/conglomerate/find_peaks.c,v 1.1 2004-04-22 13:15:01 bert Exp $"; | ^~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o model_objects.o model_objects.c model_objects.c: In function ‘input_original_positions’: model_objects.c:281:7: warning: ‘n_points’ may be used uninitialized [-Wmaybe-uninitialized] 281 | if( n_points != n_deforming_points ) | ^ model_objects.c:244:37: note: ‘n_points’ was declared here 244 | int i, n_objects, n_points; | ^~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o deform_line.o deform_line.c deform_line.c: In function ‘one_iteration_lines’: deform_line.c:59:50: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 59 | lines->end_indices[0] != lines->n_points && | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ 60 | lines->end_indices[0] != lines->n_points+1 ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_in_direction.o find_in_direction.c find_in_direction.c: In function ‘find_boundary_in_direction’: find_in_direction.c:431:27: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 431 | (isovalue && | ~~~~~~~~~^~ 432 | check_voxel_for_isovalue( lookup, volume, label_volume, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 | degrees_continuity, | ~~~~~~~~~~~~~~~~~~~ 434 | voxel_index0, | ~~~~~~~~~~~~~ 435 | origin0, direction0, | ~~~~~~~~~~~~~~~~~~~~ 436 | FALSE, | ~~~~~~ 437 | current_distance0, max_dist, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 | boundary_def->min_isovalue, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 | boundary_def->normal_direction, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 | found, &found_dist ) || | ~~~~~~~~~~~~~~~~~~~~ find_in_direction.c:513:27: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 513 | (isovalue && | ~~~~~~~~~^~ 514 | check_voxel_for_isovalue( lookup, volume, label_volume, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 | degrees_continuity, | ~~~~~~~~~~~~~~~~~~~ 516 | voxel_index1, | ~~~~~~~~~~~~~ 517 | origin1, direction1, | ~~~~~~~~~~~~~~~~~~~~ 518 | TRUE, | ~~~~~ 519 | current_distance1, max_dist, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 | boundary_def->min_isovalue, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 | boundary_def->normal_direction, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 | found, &found_dist ) || | ~~~~~~~~~~~~~~~~~~~~ find_in_direction.c: In function ‘check_voxel_for_isovalue’: find_in_direction.c:727:59: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 727 | if( normal_direction == TOWARDS_LOWER && dot_prod > 0.0 || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o intersect_voxel.o intersect_voxel.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_tag_outliers.o find_tag_outliers.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_vertex.o find_vertex.c In file included from /usr/include/volume_io.h:44, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : find_vertex.c: In function ‘main’: find_vertex.c:50:27: warning: ‘ind’ may be used uninitialized [-Wmaybe-uninitialized] 50 | Point_z(points[ind]), best_dist ); | ^ find_vertex.c:12:34: note: ‘ind’ was declared here 12 | int i, n_objects, ind, n_points, best_poly, n_items; | ^~~ find_vertex.c:66:9: warning: ‘best_poly’ may be used uninitialized [-Wmaybe-uninitialized] 66 | print( "Closest polygon: %d\n", best_poly ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ find_vertex.c:12:49: note: ‘best_poly’ was declared here 12 | int i, n_objects, ind, n_points, best_poly, n_items; | ^~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_volume_centroid.o find_volume_centroid.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o models.o models.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o conjugate_min.o conjugate_min.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o conjugate_grad.o conjugate_grad.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o line_minimization.o line_minimization.c line_minimization.c: In function ‘minimize_along_line’: line_minimization.c:142:25: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 142 | if( f_next < f1 && t_next < t1 || | ~~~~~~~~~~~~^~~~~~~~~~~~~~ line_minimization.c:150:30: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 150 | else if( f_next < f1 && t_next >= t1 || | ~~~~~~~~~~~~^~~~~~~~~~~~~~~ line_minimization.c:158:30: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 158 | else if( f_next > f1 && t_next < t1 || | ~~~~~~~~~~~~^~~~~~~~~~~~~~ line_minimization.c:164:30: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 164 | else if( f_next > f1 && t_next >= t1 || | ~~~~~~~~~~~~^~~~~~~~~~~~~~~ line_minimization.c:102:7: warning: ‘t2’ may be used uninitialized [-Wmaybe-uninitialized] 102 | if( t2 < t0 ) | ^ line_minimization.c:38:30: note: ‘t2’ was declared here 38 | Real t0, t1, t2, f0, f1, f2, t_next, f_next, step, fsize; | ^~ line_minimization.c:117:39: warning: ‘f0’ may be used uninitialized [-Wmaybe-uninitialized] 117 | bottom = 2.0 * (t2*f0-t0*f2-t1*f0+t1*f2-t2*f1+t0*f1); | ~~^~~ line_minimization.c:38:34: note: ‘f0’ was declared here 38 | Real t0, t1, t2, f0, f1, f2, t_next, f_next, step, fsize; | ^~ line_minimization.c:117:45: warning: ‘f2’ may be used uninitialized [-Wmaybe-uninitialized] 117 | bottom = 2.0 * (t2*f0-t0*f2-t1*f0+t1*f2-t2*f1+t0*f1); | ~~^~~ line_minimization.c:38:42: note: ‘f2’ was declared here 38 | Real t0, t1, t2, f0, f1, f2, t_next, f_next, step, fsize; | ^~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o fit_curve.o fit_curve.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o fit_curve2.o fit_curve2.c fit_curve2.c: In function ‘fit_curve’: fit_curve2.c:783:72: warning: variable ‘fit’ set but not used [-Wunused-but-set-variable=] 783 | Real *parameters, range_tolerance, domain_tolerance, fit; | ^~~ fit_curve2.c: In function ‘get_closest_segment’: fit_curve2.c:606:11: warning: ‘best_seg’ may be used uninitialized [-Wmaybe-uninitialized] 606 | return( best_seg ); | ^ fit_curve2.c:590:16: note: ‘best_seg’ was declared here 590 | int seg, best_seg; | ^~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_polygons.o flatten_polygons.c flatten_polygons.c: In function ‘normalize_size’: flatten_polygons.c:59:14: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=] 59 | Vector offset, diff; | ^~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_sheet.o flatten_sheet.c In function ‘flatten_polygons’, inlined from ‘main’ at flatten_sheet.c:101:5: flatten_sheet.c:286:44: warning: ‘which’ may be used uninitialized [-Wmaybe-uninitialized] 286 | fixed_indices[i+1] = neighbours[which][i]; | ^ flatten_sheet.c: In function ‘main’: flatten_sheet.c:252:64: note: ‘which’ was declared here 252 | int i, p, point, *n_neighbours, **neighbours, which; | ^~~~~ flatten_sheet.c:259:22: warning: ‘x_dir.coords[0]’ may be used uninitialized [-Wmaybe-uninitialized] 259 | Vector x_dir, y_dir, offset, p12, p13; | ^~~~~ flatten_sheet.c:259:29: warning: ‘y_dir.coords[0]’ may be used uninitialized [-Wmaybe-uninitialized] 259 | Vector x_dir, y_dir, offset, p12, p13; | ^~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o fit_3d.o fit_3d.c fit_3d.c: In function ‘create_image_coefficients’: fit_3d.c:483:16: warning: variable ‘n_involved’ set but not used [-Wunused-but-set-variable=] 483 | int n_involved, inv_index, neigh_parm_index, n_vectors, v; | ^~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_sheet3.o flatten_sheet3.c flatten_sheet3.c: In function ‘create_coefficients’: flatten_sheet3.c:463:36: warning: format ‘%g’ expects a matching ‘double’ argument [-Wformat=] 463 | print_error( "Y = %g\n" ); | ~^ | | | double In file included from /usr/include/volume_io/arrays.h:32, from /usr/include/volume_io.h:43, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : In function ‘flatten_polygons’, inlined from ‘main’ at flatten_sheet3.c:140:5: flatten_sheet3.c:609:34: warning: ‘which’ may be used uninitialized [-Wmaybe-uninitialized] 609 | ALLOC( flat, n_neighbours[which] ); | ^ flatten_sheet3.c: In function ‘main’: flatten_sheet3.c:581:35: note: ‘which’ was declared here 581 | int i, p, point, which, n; | ^~~~~ flatten_sheet3.c:588:22: warning: ‘x_dir.coords[0]’ may be used uninitialized [-Wmaybe-uninitialized] 588 | Vector x_dir, y_dir, offset; | ^~~~~ flatten_sheet3.c:588:29: warning: ‘y_dir.coords[0]’ may be used uninitialized [-Wmaybe-uninitialized] 588 | Vector x_dir, y_dir, offset; | ^~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_to_sphere.o flatten_to_sphere.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flip_tags.o flip_tags.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flip_volume.o flip_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o f_prob.o f_prob.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_to_sphere2.o flatten_to_sphere2.c In function ‘flatten_polygons’, inlined from ‘main’ at flatten_to_sphere2.c:78:5: flatten_to_sphere2.c:788:38: warning: ‘radius’ may be used uninitialized [-Wmaybe-uninitialized] 788 | parameters[n_parameters-1] = (dtype) radius; | ^~~~~~~~~~~~~~ flatten_to_sphere2.c: In function ‘main’: flatten_to_sphere2.c:643:27: note: ‘radius’ was declared here 643 | Real len, radius, *weights[3][3], *x_flat, *y_flat, *z_flat; | ^~~~~~ In function ‘evaluate_fit_along_line’, inlined from ‘minimize_along_line’ at flatten_to_sphere2.c:566:5, inlined from ‘flatten_polygons’ at flatten_to_sphere2.c:833:9, inlined from ‘main’ at flatten_to_sphere2.c:78:5: flatten_to_sphere2.c:412:53: warning: ‘dr’ may be used uninitialized [-Wmaybe-uninitialized] 412 | l2 = dx1 * dx1 + dy1 * dy1 + dz1 * dz1 - dr * dr; | ~~~^~~~ flatten_to_sphere2.c: In function ‘main’: flatten_to_sphere2.c:367:24: note: ‘dr’ was declared here 367 | Real dx, dy, dz, dr, dist, radius, radius2; | ^~ In function ‘evaluate_fit_along_line’, inlined from ‘minimize_along_line’ at flatten_to_sphere2.c:566:5, inlined from ‘flatten_polygons’ at flatten_to_sphere2.c:833:9, inlined from ‘main’ at flatten_to_sphere2.c:78:5: flatten_to_sphere2.c:411:54: warning: ‘radius’ may be used uninitialized [-Wmaybe-uninitialized] 411 | l1 = x1 * dx1 + y1 * dy1 + z1 * dz1 - radius * dr; | ~~~~~~~^~~~ flatten_to_sphere2.c: In function ‘main’: flatten_to_sphere2.c:367:34: note: ‘radius’ was declared here 367 | Real dx, dy, dz, dr, dist, radius, radius2; | ^~~~~~ In function ‘evaluate_fit_along_line’, inlined from ‘minimize_along_line’ at flatten_to_sphere2.c:566:5, inlined from ‘flatten_polygons’ at flatten_to_sphere2.c:833:9, inlined from ‘main’ at flatten_to_sphere2.c:78:5: flatten_to_sphere2.c:410:12: warning: ‘radius2’ may be used uninitialized [-Wmaybe-uninitialized] 410 | l0 = x1 * x1 + y1 * y1 + z1 * z1 - radius2; | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ flatten_to_sphere2.c: In function ‘main’: flatten_to_sphere2.c:367:42: note: ‘radius2’ was declared here 367 | Real dx, dy, dz, dr, dist, radius, radius2; | ^~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o gaussian_blur_peaks.o gaussian_blur_peaks.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o get_tic.o get_tic.c get_tic.c: In function ‘main’: get_tic.c:56:37: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 55 | voxel_flag_string[0] != 'v' && voxel_flag_string[0] != 'w' && | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | voxel_flag_string[0] != 'V' && voxel_flag_string[0] != 'W' ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o histogram_volume.o histogram_volume.c histogram_volume.c: In function ‘main’: histogram_volume.c:227:30: warning: ‘min_pos’ may be used uninitialized [-Wmaybe-uninitialized] 227 | pos = min_pos + (max_pos - min_pos) * | ~~~~~~~~~^~~~~~~~~~ histogram_volume.c:30:48: note: ‘min_pos’ was declared here 30 | Real x_pos, y_height, pos, min_pos, max_pos; | ^~~~~~~ histogram_volume.c:227:30: warning: ‘max_pos’ may be used uninitialized [-Wmaybe-uninitialized] 227 | pos = min_pos + (max_pos - min_pos) * | ~~~~~~~~~^~~~~~~~~~ histogram_volume.c:30:57: note: ‘max_pos’ was declared here 30 | Real x_pos, y_height, pos, min_pos, max_pos; | ^~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o group_diff.o group_diff.c group_diff.c: In function ‘main’: group_diff.c:101:11: warning: ‘n_points’ may be used uninitialized [-Wmaybe-uninitialized] 101 | if( get_object_points( object_list[0], &points ) != n_points ) | ^ group_diff.c:19:58: note: ‘n_points’ was declared here 19 | int i, n_objects, n_surfaces[2], group, n_points, s, p; | ^~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o intensity_statistics.o intensity_statistics.c intensity_statistics.c: In function ‘main’: intensity_statistics.c:209:9: warning: ‘label_volume’ may be used uninitialized [-Wmaybe-uninitialized] 209 | delete_volume( label_volume ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ intensity_statistics.c:28:34: note: ‘label_volume’ was declared here 28 | Volume volume, label_volume; | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o interpolate_tags.o interpolate_tags.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o lookup_labels.o lookup_labels.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_diff_volume.o make_diff_volume.c make_diff_volume.c: In function ‘main’: make_diff_volume.c:64:49: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 64 | in_one = (min1 > max1 || min1 <= value1 && value1 <= max1); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ make_diff_volume.c:65:49: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 65 | in_two = (min2 > max2 || min2 <= value2 && value2 <= max2); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o labels_to_rgb.o labels_to_rgb.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o label_sulci.o label_sulci.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_gradient_volume.o make_gradient_volume.c make_gradient_volume.c: In function ‘main’: make_gradient_volume.c:47:27: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 47 | if( deriv_number != 1 && deriv_number != 2 || order != 1 && order != 3 ) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_grid_lines.o make_grid_lines.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_slice.o make_slice.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_geodesic_volume.o make_geodesic_volume.c make_geodesic_volume.c: In function ‘label_surface_voxels’: make_geodesic_volume.c:168:40: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 168 | if( dx == 0 && dy == 0 && dz == 0 || | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ make_geodesic_volume.c:173:40: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 173 | if( dx == 0 && dy == 0 && dz == 0 || | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ In function ‘find_nearest_voxel’, inlined from ‘main’ at make_geodesic_volume.c:122:5: make_geodesic_volume.c:247:49: warning: array subscript 3 is above array bounds of ‘int[3]’ [-Warray-bounds=] 247 | limits[face][d] = limits[1-face][d]; | ~~~~~~~~~~~~~~^~~ make_geodesic_volume.c: In function ‘main’: make_geodesic_volume.c:213:14: note: while referencing ‘limits’ 213 | int limits[2][N_DIMENSIONS]; | ^~~~~~ In function ‘find_nearest_voxel’, inlined from ‘main’ at make_geodesic_volume.c:122:5: make_geodesic_volume.c:247:29: warning: array subscript 3 is above array bounds of ‘int[3]’ [-Warray-bounds=] 247 | limits[face][d] = limits[1-face][d]; | ~~~~~~~~~~~~^~~ make_geodesic_volume.c: In function ‘main’: make_geodesic_volume.c:213:14: note: while referencing ‘limits’ 213 | int limits[2][N_DIMENSIONS]; | ^~~~~~ In function ‘compute_geodesic_volume’, inlined from ‘main’ at make_geodesic_volume.c:124:5: make_geodesic_volume.c:422:5: warning: ‘MEM[(int *)&origin]’ may be used uninitialized [-Wmaybe-uninitialized] 422 | set_volume_real_value( volume, origin[X], origin[Y], origin[Z], 0, 0, 0.0 ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make_geodesic_volume.c: In function ‘main’: make_geodesic_volume.c:49:30: note: ‘MEM[(int *)&origin]’ was declared here 49 | int dim, origin[N_DIMENSIONS]; | ^~~~~~ In function ‘compute_geodesic_volume’, inlined from ‘main’ at make_geodesic_volume.c:124:5: make_geodesic_volume.c:422:5: warning: ‘MEM[(int *)&origin + 4B]’ may be used uninitialized [-Wmaybe-uninitialized] 422 | set_volume_real_value( volume, origin[X], origin[Y], origin[Z], 0, 0, 0.0 ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make_geodesic_volume.c: In function ‘main’: make_geodesic_volume.c:49:30: note: ‘MEM[(int *)&origin + 4B]’ was declared here 49 | int dim, origin[N_DIMENSIONS]; | ^~~~~~ In function ‘compute_geodesic_volume’, inlined from ‘main’ at make_geodesic_volume.c:124:5: make_geodesic_volume.c:422:5: warning: ‘MEM[(int *)&origin + 8B]’ may be used uninitialized [-Wmaybe-uninitialized] 422 | set_volume_real_value( volume, origin[X], origin[Y], origin[Z], 0, 0, 0.0 ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make_geodesic_volume.c: In function ‘main’: make_geodesic_volume.c:49:30: note: ‘MEM[(int *)&origin + 8B]’ was declared here 49 | int dim, origin[N_DIMENSIONS]; | ^~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_line_links.o make_line_links.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_sphere_transform.o make_sphere_transform.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_surface_bitlist.o make_surface_bitlist.c make_surface_bitlist.c: In function ‘label_surface_voxels’: make_surface_bitlist.c:161:44: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 161 | if( dx == 0 && dy == 0 && dz == 0 || | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ make_surface_bitlist.c:166:44: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 166 | if( dx == 0 && dy == 0 && dz == 0 || | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o map_surface_to_sheet.o map_surface_to_sheet.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o map_sheets.o map_sheets.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o mask_values.o mask_values.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o map_colours_to_sphere.o map_colours_to_sphere.c map_colours_to_sphere.c: In function ‘main’: map_colours_to_sphere.c:282:36: warning: ‘interp[0]’ may be used uninitialized [-Wmaybe-uninitialized] 282 | Real coefs[8], best_value, interp[4], value; | ^~~~~~ map_colours_to_sphere.c:282:36: warning: ‘interp[1]’ may be used uninitialized [-Wmaybe-uninitialized] In function ‘evaluate_volume_by_voting’, inlined from ‘map_colours_to_sphere_topology’ at map_colours_to_sphere.c:252:13, inlined from ‘main’ at map_colours_to_sphere.c:93:5: map_colours_to_sphere.c:375:23: warning: ‘interp[2]’ may be used uninitialized [-Wmaybe-uninitialized] 375 | values[2] = interp[2]; | ~~~~~~~~~~^~~~~~~~~~~ map_colours_to_sphere.c: In function ‘main’: map_colours_to_sphere.c:282:36: note: ‘interp[2]’ was declared here 282 | Real coefs[8], best_value, interp[4], value; | ^~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o mask_volume.o mask_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o match_tags.o match_tags.c match_tags.c:21:13: warning: ‘rcsid’ defined but not used [-Wunused-variable] 21 | static char rcsid[]="$Header: /private-cvsroot/libraries/conglomerate/match_tags.c,v 1.1 2004-04-07 15:53:20 bert Exp $"; | ^~~~~ match_tags.c: In function ‘main’: match_tags.c:165:26: warning: ‘near_tag’ may be used uninitialized [-Wmaybe-uninitialized] 165 | this_tag = tags2[near_tag]; | ^ match_tags.c:87:34: note: ‘near_tag’ was declared here 87 | int ipoint1, ipoint2, icoord, near_tag; | ^~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o marching_cubes.o marching_cubes.c marching_cubes.c: In function ‘get_point_index’: marching_cubes.c:447:20: warning: variable ‘point_class’ set but not used [-Wunused-but-set-variable=] 447 | Point_classes point_class; | ^~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o minctotag.o minctotag.c minctotag.c: In function ‘main’: minctotag.c:83:37: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 83 | if( min_id > max_id && value != 0.0 || | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o mincmask.o mincmask.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o minc_to_rgb.o minc_to_rgb.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o place_images.o place_images.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o normalize_pet.o normalize_pet.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o plane_polygon_intersect.o plane_polygon_intersect.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o preprocess_segmentation.o preprocess_segmentation.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_2d_coords.o print_2d_coords.c print_2d_coords.c: In function ‘main’: print_2d_coords.c:11:41: warning: variable ‘poly’ set but not used [-Wunused-but-set-variable=] 11 | int n_src_objects, poly; | ^~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' g++ -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -c -o mincdefrag.o mincdefrag.cc mincdefrag.cc: In function ‘int clean_color(int*, short int*, short int, short int, int)’: mincdefrag.cc:22:13: warning: unused variable ‘changed’ [-Wunused-variable] 22 | int changed, num_color, n_voxels; | ^~~~~~~ mincdefrag.cc:23:13: warning: unused variable ‘old_im1’ [-Wunused-variable] 23 | short * old_im1, * old_i, * old_ip1; | ^~~~~~~ mincdefrag.cc:23:24: warning: unused variable ‘old_i’ [-Wunused-variable] 23 | short * old_im1, * old_i, * old_ip1; | ^~~~~ mincdefrag.cc:23:33: warning: unused variable ‘old_ip1’ [-Wunused-variable] 23 | short * old_im1, * old_i, * old_ip1; | ^~~~~~~ mincdefrag.cc: In function ‘int extract_color(int*, short int, short int, int, VIO_Volume)’: mincdefrag.cc:159:12: warning: unused variable ‘i’ [-Wunused-variable] 159 | int i, j, k, ii; | ^ mincdefrag.cc:159:15: warning: unused variable ‘j’ [-Wunused-variable] 159 | int i, j, k, ii; | ^ mincdefrag.cc:159:18: warning: unused variable ‘k’ [-Wunused-variable] 159 | int i, j, k, ii; | ^ mincdefrag.cc:159:21: warning: unused variable ‘ii’ [-Wunused-variable] 159 | int i, j, k, ii; | ^~ mincdefrag.cc:165:11: warning: unused variable ‘nodes’ [-Wunused-variable] 165 | int * nodes = NULL; | ^~~~~ mincdefrag.cc:167:13: warning: unused variable ‘old_im1’ [-Wunused-variable] 167 | short * old_im1, * old_i, * old_ip1; | ^~~~~~~ mincdefrag.cc:167:24: warning: unused variable ‘old_i’ [-Wunused-variable] 167 | short * old_im1, * old_i, * old_ip1; | ^~~~~ mincdefrag.cc:167:33: warning: unused variable ‘old_ip1’ [-Wunused-variable] 167 | short * old_im1, * old_i, * old_ip1; | ^~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_all_labels.o print_all_labels.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_axis_angles.o print_axis_angles.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_all_label_bounding_boxes.o print_all_label_bounding_boxes.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_volume_value.o print_volume_value.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' g++ -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -c -o mincskel.o mincskel.cc mincskel.cc: In function ‘int skel(int*, VIO_Volume)’: mincskel.cc:175:12: warning: unused variable ‘i’ [-Wunused-variable] 175 | int i, j, k, ii; | ^ mincskel.cc:175:15: warning: unused variable ‘j’ [-Wunused-variable] 175 | int i, j, k, ii; | ^ mincskel.cc:175:18: warning: unused variable ‘k’ [-Wunused-variable] 175 | int i, j, k, ii; | ^ mincskel.cc:175:21: warning: unused variable ‘ii’ [-Wunused-variable] 175 | int i, j, k, ii; | ^~ mincskel.cc:181:11: warning: unused variable ‘nodes’ [-Wunused-variable] 181 | int * nodes = NULL; | ^~~~~ mincskel.cc:183:13: warning: unused variable ‘old_im1’ [-Wunused-variable] 183 | short * old_im1, * old_i, * old_ip1; | ^~~~~~~ mincskel.cc:183:24: warning: unused variable ‘old_i’ [-Wunused-variable] 183 | short * old_im1, * old_i, * old_ip1; | ^~~~~ mincskel.cc:183:33: warning: unused variable ‘old_ip1’ [-Wunused-variable] 183 | short * old_im1, * old_i, * old_ip1; | ^~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_world_value.o print_world_value.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o reparameterize_line.o reparameterize_line.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_world_values.o print_world_values.c print_world_values.c: In function ‘main’: print_world_values.c:120:42: warning: format ‘%[^ ’ expects argument of type ‘char *’, but argument 3 has type ‘char (*)[255]’ [-Wformat=] 120 | if(fscanf(glimfile, "%[^ \t] %*[^\n] %*1[\n]", &cur_minc) > 0) { | ~~~~^~ ~~~~~~~~~ | | | | char * char (*)[255] print_world_values.c:52:23: warning: unused variable ‘r’ [-Wunused-variable] 52 | int i, r, keep_looping, n_coords; | ^ In file included from /usr/include/stdio.h:974, from /usr/include/volume_io/basic.h:34, from /usr/include/volume_io.h:40, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : In function ‘printf’, inlined from ‘main’ at print_world_values.c:137:5: /usr/include/bits/stdio2.h:118:10: warning: ‘voxx’ may be used uninitialized [-Wmaybe-uninitialized] 118 | return __printf_chk (__USE_FORTIFY_LEVEL - 1, __fmt, __va_arg_pack ()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ print_world_values.c: In function ‘main’: print_world_values.c:50:20: note: ‘voxx’ was declared here 50 | int voxx, voxy, voxz, sizes[MAX_DIMENSIONS]; | ^~~~ In function ‘printf’, inlined from ‘main’ at print_world_values.c:137:5: /usr/include/bits/stdio2.h:118:10: warning: ‘voxy’ may be used uninitialized [-Wmaybe-uninitialized] 118 | return __printf_chk (__USE_FORTIFY_LEVEL - 1, __fmt, __va_arg_pack ()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ print_world_values.c: In function ‘main’: print_world_values.c:50:26: note: ‘voxy’ was declared here 50 | int voxx, voxy, voxz, sizes[MAX_DIMENSIONS]; | ^~~~ In function ‘printf’, inlined from ‘main’ at print_world_values.c:137:5: /usr/include/bits/stdio2.h:118:10: warning: ‘voxz’ may be used uninitialized [-Wmaybe-uninitialized] 118 | return __printf_chk (__USE_FORTIFY_LEVEL - 1, __fmt, __va_arg_pack ()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ print_world_values.c: In function ‘main’: print_world_values.c:50:32: note: ‘voxz’ was declared here 50 | int voxx, voxy, voxz, sizes[MAX_DIMENSIONS]; | ^~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o random_warp.o random_warp.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o rgb_to_minc.o rgb_to_minc.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o scale_minc_image.o scale_minc_image.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o scan_object_to_volume.o scan_object_to_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o stats_tag_file.o stats_tag_file.c stats_tag_file.c: In function ‘get_stats_for_one_file’: stats_tag_file.c:100:66: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 100 | (Real) Point_y(marker->position) >= y_min_range && | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ 101 | (Real) Point_y(marker->position) <= y_max_range ) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o segment_probabilities.o segment_probabilities.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o spherical_resample.o spherical_resample.c spherical_resample.c: In function ‘main’: spherical_resample.c:134:48: warning: ‘in_values’ may be used uninitialized [-Wmaybe-uninitialized] 134 | value += weights[i] * in_values[surface->indices[ | ^ spherical_resample.c:16:40: note: ‘in_values’ was declared here 16 | Real dist, value, *in_values; | ^~~~~~~~~ spherical_resample.c:140:17: warning: ‘value’ may be used uninitialized [-Wmaybe-uninitialized] 140 | if( output_real( out_file, value ) != OK || | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spherical_resample.c:16:32: note: ‘value’ was declared here 16 | Real dist, value, *in_values; | ^~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o scan_lines_to_polygons.o scan_lines_to_polygons.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o subsample_volume.o subsample_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o surface_mask.o surface_mask.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o tag_volume.o tag_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o tagtominc.o tagtominc.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o trimesh_resample.o trimesh_resample.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o threshold_volume.o threshold_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o surface_mask2.o surface_mask2.c surface_mask2.c: In function ‘binary_object_mask’: surface_mask2.c:45:42: warning: variable ‘max_real_value’ set but not used [-Wunused-but-set-variable=] 45 | Real min_real_value, max_real_value; | ^~~~~~~~~~~~~~ surface_mask2.c:45:26: warning: variable ‘min_real_value’ set but not used [-Wunused-but-set-variable=] 45 | Real min_real_value, max_real_value; | ^~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o trimesh_set_points.o trimesh_set_points.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o trimesh_to_polygons.o trimesh_to_polygons.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o tags_to_spheres.o tags_to_spheres.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o transform_volume.o transform_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o transform_tags.o transform_tags.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o transform_objects.o transform_objects.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o volume_object_evaluate.o volume_object_evaluate.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o two_surface_resample.o two_surface_resample.c two_surface_resample.c: In function ‘main’: two_surface_resample.c:140:48: warning: ‘in_values’ may be used uninitialized [-Wmaybe-uninitialized] 140 | value += weights[i] * in_values[surface->indices[ | ^ two_surface_resample.c:17:40: note: ‘in_values’ was declared here 17 | Real dist, value, *in_values; | ^~~~~~~~~ two_surface_resample.c:146:17: warning: ‘value’ may be used uninitialized [-Wmaybe-uninitialized] 146 | if( output_real( out_file, value ) != OK || | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ two_surface_resample.c:17:32: note: ‘value’ was declared here 17 | Real dist, value, *in_values; | ^~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o autocrop_volume autocrop_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o autocrop_volume autocrop_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o add_labels add_labels.o minc_labels.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o add_labels add_labels.o minc_labels.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o tri_mesh.o tri_mesh.c tri_mesh.c: In function ‘coalesce_on_node_values’: tri_mesh.c:970:39: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 970 | if( min_size_sq > 0.0 && size < min_size_sq || | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o apply_sphere_transform apply_sphere_transform.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o apply_sphere_transform apply_sphere_transform.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o box_filter_volume box_filter_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o box_filter_volume box_filter_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o average_voxels average_voxels.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o average_voxels average_voxels.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o blur_surface blur_surface.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o blur_surface blur_surface.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o box_filter_volume_nd box_filter_volume_nd.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o box_filter_volume_nd box_filter_volume_nd.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o chop_tags chop_tags.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o chop_tags chop_tags.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o chamfer_volume chamfer_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o chamfer_volume chamfer_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o clamp_volume clamp_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o clamp_volume clamp_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o classify_sulcus classify_sulcus.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o classify_sulcus classify_sulcus.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o clean_surface_labels clean_surface_labels.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o clean_surface_labels clean_surface_labels.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o cluster_volume cluster_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o cluster_volume cluster_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o clip_tags clip_tags.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o clip_tags clip_tags.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o coalesce_lines coalesce_lines.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o coalesce_lines coalesce_lines.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o close_surface close_surface.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o close_surface close_surface.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o compare_left_right compare_left_right.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o compare_left_right compare_left_right.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o compare_left_right_groups compare_left_right_groups.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o compare_left_right_groups compare_left_right_groups.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o composite_images composite_images.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o composite_images composite_images.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o compare_lengths compare_lengths.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o compare_lengths compare_lengths.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o composite_minc_images composite_minc_images.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o composite_minc_images composite_minc_images.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o composite_volumes composite_volumes.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o composite_volumes composite_volumes.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o compute_bounding_view compute_bounding_view.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o compute_bounding_view compute_bounding_view.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o concat_images concat_images.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o concat_images concat_images.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o compute_resels compute_resels.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o compute_resels compute_resels.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o contour_slice contour_slice.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o contour_slice contour_slice.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o count_thresholded_volume count_thresholded_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o count_thresholded_volume count_thresholded_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_2d_sheet create_2d_sheet.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_2d_sheet create_2d_sheet.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_box create_box.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_box create_box.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o convex_hull convex_hull.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o convex_hull convex_hull.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_2d_surface create_2d_surface.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_2d_surface create_2d_surface.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_label_map create_label_map.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_label_map create_label_map.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_four_volumes create_four_volumes.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_four_volumes create_four_volumes.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_landmark_full_volume create_landmark_full_volume.o get_filenames.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_landmark_full_volume create_landmark_full_volume.o get_filenames.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_mahalanobis create_mahalanobis.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_mahalanobis create_mahalanobis.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_warping_points create_warping_points.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_warping_points create_warping_points.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_surface_interpolation_lsq create_surface_interpolation_lsq.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_surface_interpolation_lsq create_surface_interpolation_lsq.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o diff_mahalanobis diff_mahalanobis.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o diff_mahalanobis diff_mahalanobis.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dilate_volume dilate_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dilate_volume dilate_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dim_image dim_image.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dim_image dim_image.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dilate_volume_completely dilate_volume_completely.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dilate_volume_completely dilate_volume_completely.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dump_deformation_distances dump_deformation_distances.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dump_deformation_distances dump_deformation_distances.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dump_points_to_tag_file dump_points_to_tag_file.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dump_points_to_tag_file dump_points_to_tag_file.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dump_rms dump_rms.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dump_rms dump_rms.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dump_transform dump_transform.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dump_transform dump_transform.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dump_uv dump_uv.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dump_uv dump_uv.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o evaluate evaluate.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o evaluate evaluate.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o extract_largest_line extract_largest_line.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o extract_largest_line extract_largest_line.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o extract_tag_slice extract_tag_slice.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o extract_tag_slice extract_tag_slice.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o fill_sulci fill_sulci.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o fill_sulci fill_sulci.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o find_buried_surface find_buried_surface.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_buried_surface find_buried_surface.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o find_image_bounding_box find_image_bounding_box.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_image_bounding_box find_image_bounding_box.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o find_tag_outliers find_tag_outliers.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_tag_outliers find_tag_outliers.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o find_peaks find_peaks.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_peaks find_peaks.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o find_vertex find_vertex.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_vertex find_vertex.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o find_volume_centroid find_volume_centroid.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_volume_centroid find_volume_centroid.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o fit_curve fit_curve.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o fit_curve fit_curve.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o fit_curve2 fit_curve2.o conjugate_min.o conjugate_grad.o line_minimization.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o fit_curve2 fit_curve2.o conjugate_min.o conjugate_grad.o line_minimization.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o flatten_polygons flatten_polygons.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flatten_polygons flatten_polygons.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o find_surface_distances find_surface_distances.o search_utils.o find_in_direction.o model_objects.o intersect_voxel.o deform_line.o models.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_surface_distances find_surface_distances.o search_utils.o find_in_direction.o model_objects.o intersect_voxel.o deform_line.o models.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o flatten_sheet flatten_sheet.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flatten_sheet flatten_sheet.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o flatten_sheet3 flatten_sheet3.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flatten_sheet3 flatten_sheet3.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o flatten_to_sphere flatten_to_sphere.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flatten_to_sphere flatten_to_sphere.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o flip_tags flip_tags.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flip_tags flip_tags.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o flatten_to_sphere2 flatten_to_sphere2.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flatten_to_sphere2 flatten_to_sphere2.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o flip_volume flip_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flip_volume flip_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o f_prob f_prob.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o f_prob f_prob.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o gaussian_blur_peaks gaussian_blur_peaks.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o gaussian_blur_peaks gaussian_blur_peaks.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o fit_3d fit_3d.o find_in_direction.o model_objects.o intersect_voxel.o deform_line.o models.o search_utils.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o fit_3d fit_3d.o find_in_direction.o model_objects.o intersect_voxel.o deform_line.o models.o search_utils.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o get_tic get_tic.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o get_tic get_tic.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o group_diff group_diff.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o group_diff group_diff.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o interpolate_tags interpolate_tags.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o interpolate_tags interpolate_tags.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o histogram_volume histogram_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o histogram_volume histogram_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o intensity_statistics intensity_statistics.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o intensity_statistics intensity_statistics.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o label_sulci label_sulci.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o label_sulci label_sulci.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o lookup_labels lookup_labels.o minc_labels.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o lookup_labels lookup_labels.o minc_labels.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o labels_to_rgb labels_to_rgb.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o labels_to_rgb labels_to_rgb.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_diff_volume make_diff_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_diff_volume make_diff_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_gradient_volume make_gradient_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_gradient_volume make_gradient_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_grid_lines make_grid_lines.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_grid_lines make_grid_lines.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_geodesic_volume make_geodesic_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_geodesic_volume make_geodesic_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_line_links make_line_links.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_line_links make_line_links.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_slice make_slice.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_slice make_slice.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_sphere_transform make_sphere_transform.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_sphere_transform make_sphere_transform.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_surface_bitlist make_surface_bitlist.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_surface_bitlist make_surface_bitlist.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o map_colours_to_sphere map_colours_to_sphere.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o map_colours_to_sphere map_colours_to_sphere.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o map_surface_to_sheet map_surface_to_sheet.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o map_surface_to_sheet map_surface_to_sheet.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o map_sheets map_sheets.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o map_sheets map_sheets.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o mask_values mask_values.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o mask_values mask_values.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o marching_cubes marching_cubes.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o marching_cubes marching_cubes.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o mask_volume mask_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o mask_volume mask_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o match_tags match_tags.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o match_tags match_tags.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o mincmask mincmask.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o mincmask mincmask.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o minctotag minctotag.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o minctotag minctotag.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CXX --mode=link g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o mincdefrag mincdefrag.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o mincdefrag mincdefrag.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CXX --mode=link g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o mincskel mincskel.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o mincskel mincskel.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o minc_to_rgb minc_to_rgb.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o minc_to_rgb minc_to_rgb.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o place_images place_images.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o place_images place_images.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o plane_polygon_intersect plane_polygon_intersect.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o plane_polygon_intersect plane_polygon_intersect.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o normalize_pet normalize_pet.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o normalize_pet normalize_pet.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o preprocess_segmentation preprocess_segmentation.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o preprocess_segmentation preprocess_segmentation.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o print_2d_coords print_2d_coords.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_2d_coords print_2d_coords.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o print_all_labels print_all_labels.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_all_labels print_all_labels.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o print_all_label_bounding_boxes print_all_label_bounding_boxes.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_all_label_bounding_boxes print_all_label_bounding_boxes.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o print_axis_angles print_axis_angles.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_axis_angles print_axis_angles.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o print_volume_value print_volume_value.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_volume_value print_volume_value.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o print_world_value print_world_value.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_world_value print_world_value.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o print_world_values print_world_values.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_world_values print_world_values.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o random_warp random_warp.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o random_warp random_warp.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o reparameterize_line reparameterize_line.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o reparameterize_line reparameterize_line.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o rgb_to_minc rgb_to_minc.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o rgb_to_minc rgb_to_minc.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o scale_minc_image scale_minc_image.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o scale_minc_image scale_minc_image.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o scan_object_to_volume scan_object_to_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o scan_object_to_volume scan_object_to_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o scan_lines_to_polygons scan_lines_to_polygons.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o scan_lines_to_polygons scan_lines_to_polygons.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o segment_probabilities segment_probabilities.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o segment_probabilities segment_probabilities.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o spherical_resample spherical_resample.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o spherical_resample spherical_resample.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o stats_tag_file stats_tag_file.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o stats_tag_file stats_tag_file.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o subsample_volume subsample_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o subsample_volume subsample_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o surface_mask surface_mask.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o surface_mask surface_mask.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o tag_volume tag_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o tag_volume tag_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o surface_mask2 surface_mask2.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o surface_mask2 surface_mask2.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o tagtominc tagtominc.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o tagtominc tagtominc.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o threshold_volume threshold_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o threshold_volume threshold_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o tags_to_spheres tags_to_spheres.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o tags_to_spheres tags_to_spheres.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o trimesh_set_points trimesh_set_points.o tri_mesh.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o trimesh_set_points trimesh_set_points.o tri_mesh.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o trimesh_to_polygons trimesh_to_polygons.o tri_mesh.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o trimesh_to_polygons trimesh_to_polygons.o tri_mesh.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o trimesh_resample trimesh_resample.o tri_mesh.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o trimesh_resample trimesh_resample.o tri_mesh.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o transform_volume transform_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o transform_volume transform_volume.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o transform_tags transform_tags.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o transform_tags transform_tags.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o transform_objects transform_objects.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o transform_objects transform_objects.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o two_surface_resample two_surface_resample.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o two_surface_resample two_surface_resample.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o volume_object_evaluate volume_object_evaluate.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o volume_object_evaluate volume_object_evaluate.o -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.lCHVzU + umask 022 + cd /builddir/build/BUILD/conglomerate-1.6.80-build + '[' /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT ++ dirname /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT + mkdir -p /builddir/build/BUILD/conglomerate-1.6.80-build + mkdir /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b + /usr/bin/make install DESTDIR=/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT 'INSTALL=/usr/bin/install -p' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /usr/bin/mkdir -p '/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin' /bin/sh ./libtool --mode=install /usr/bin/install -p add_labels apply_sphere_transform autocrop_volume average_voxels blur_surface box_filter_volume box_filter_volume_nd chamfer_volume chop_tags clamp_volume classify_sulcus clean_surface_labels clip_tags close_surface cluster_volume coalesce_lines compare_left_right compare_left_right_groups compare_lengths composite_images composite_minc_images composite_volumes compute_bounding_view compute_resels concat_images contour_slice convex_hull count_thresholded_volume create_2d_sheet create_2d_surface create_box create_four_volumes create_label_map create_landmark_full_volume create_mahalanobis create_surface_interpolation_lsq create_warping_points diff_mahalanobis dilate_volume dilate_volume_completely dim_image dump_deformation_distances dump_points_to_tag_file dump_rms dump_transform dump_uv evaluate extract_tag_slice extract_largest_line fill_sulci find_buried_surface find_image_bounding_box find_peaks find_surface_distances find_tag_outliers find_vertex find_volume_centroid fit_curve fit_curve2 fit_3d flatten_polygons flatten_sheet flatten_sheet3 flatten_to_sphere flatten_to_sphere2 flip_tags flip_volume f_prob gaussian_blur_peaks get_tic group_diff histogram_volume intensity_statistics interpolate_tags label_sulci labels_to_rgb lookup_labels make_diff_volume make_geodesic_volume make_gradient_volume make_grid_lines make_line_links make_slice make_surface_bitlist make_sphere_transform map_colours_to_sphere map_surface_to_sheet map_sheets marching_cubes mask_values mask_volume match_tags mincdefrag mincmask mincskel minctotag minc_to_rgb normalize_pet place_images plane_polygon_intersect preprocess_segmentation print_2d_coords print_all_labels print_all_label_bounding_boxes print_axis_angles print_volume_value print_world_value print_world_values random_warp reparameterize_line rgb_to_minc scale_minc_image scan_lines_to_polygons scan_object_to_volume segment_probabilities spherical_resample stats_tag_file subsample_volume surface_mask surface_mask2 tag_volume tagtominc threshold_volume trimesh_resample trimesh_set_points trimesh_to_polygons tags_to_spheres transform_volume transform_tags transform_objects two_surface_resample volume_object_evaluate '/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin' libtool: install: /usr/bin/install -p add_labels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/add_labels libtool: install: /usr/bin/install -p apply_sphere_transform /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/apply_sphere_transform libtool: install: /usr/bin/install -p autocrop_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/autocrop_volume libtool: install: /usr/bin/install -p average_voxels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/average_voxels libtool: install: /usr/bin/install -p blur_surface /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/blur_surface libtool: install: /usr/bin/install -p box_filter_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/box_filter_volume libtool: install: /usr/bin/install -p box_filter_volume_nd /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/box_filter_volume_nd libtool: install: /usr/bin/install -p chamfer_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/chamfer_volume libtool: install: /usr/bin/install -p chop_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/chop_tags libtool: install: /usr/bin/install -p clamp_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clamp_volume libtool: install: /usr/bin/install -p classify_sulcus /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/classify_sulcus libtool: install: /usr/bin/install -p clean_surface_labels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clean_surface_labels libtool: install: /usr/bin/install -p clip_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clip_tags libtool: install: /usr/bin/install -p close_surface /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/close_surface libtool: install: /usr/bin/install -p cluster_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/cluster_volume libtool: install: /usr/bin/install -p coalesce_lines /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/coalesce_lines libtool: install: /usr/bin/install -p compare_left_right /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_left_right libtool: install: /usr/bin/install -p compare_left_right_groups /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_left_right_groups libtool: install: /usr/bin/install -p compare_lengths /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_lengths libtool: install: /usr/bin/install -p composite_images /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_images libtool: install: /usr/bin/install -p composite_minc_images /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_minc_images libtool: install: /usr/bin/install -p composite_volumes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_volumes libtool: install: /usr/bin/install -p compute_bounding_view /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_bounding_view libtool: install: /usr/bin/install -p compute_resels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_resels libtool: install: /usr/bin/install -p concat_images /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/concat_images libtool: install: /usr/bin/install -p contour_slice /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/contour_slice libtool: install: /usr/bin/install -p convex_hull /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/convex_hull libtool: install: /usr/bin/install -p count_thresholded_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/count_thresholded_volume libtool: install: /usr/bin/install -p create_2d_sheet /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_2d_sheet libtool: install: /usr/bin/install -p create_2d_surface /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_2d_surface libtool: install: /usr/bin/install -p create_box /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_box libtool: install: /usr/bin/install -p create_four_volumes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_four_volumes libtool: install: /usr/bin/install -p create_label_map /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_label_map libtool: install: /usr/bin/install -p create_landmark_full_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_landmark_full_volume libtool: install: /usr/bin/install -p create_mahalanobis /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_mahalanobis libtool: install: /usr/bin/install -p create_surface_interpolation_lsq /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_surface_interpolation_lsq libtool: install: /usr/bin/install -p create_warping_points /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_warping_points libtool: install: /usr/bin/install -p diff_mahalanobis /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/diff_mahalanobis libtool: install: /usr/bin/install -p dilate_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dilate_volume libtool: install: /usr/bin/install -p dilate_volume_completely /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dilate_volume_completely libtool: install: /usr/bin/install -p dim_image /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dim_image libtool: install: /usr/bin/install -p dump_deformation_distances /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_deformation_distances libtool: install: /usr/bin/install -p dump_points_to_tag_file /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_points_to_tag_file libtool: install: /usr/bin/install -p dump_rms /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_rms libtool: install: /usr/bin/install -p dump_transform /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_transform libtool: install: /usr/bin/install -p dump_uv /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_uv libtool: install: /usr/bin/install -p evaluate /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/evaluate libtool: install: /usr/bin/install -p extract_tag_slice /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/extract_tag_slice libtool: install: /usr/bin/install -p extract_largest_line /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/extract_largest_line libtool: install: /usr/bin/install -p fill_sulci /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fill_sulci libtool: install: /usr/bin/install -p find_buried_surface /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_buried_surface libtool: install: /usr/bin/install -p find_image_bounding_box /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_image_bounding_box libtool: install: /usr/bin/install -p find_peaks /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_peaks libtool: install: /usr/bin/install -p find_surface_distances /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_surface_distances libtool: install: /usr/bin/install -p find_tag_outliers /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_tag_outliers libtool: install: /usr/bin/install -p find_vertex /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_vertex libtool: install: /usr/bin/install -p find_volume_centroid /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_volume_centroid libtool: install: /usr/bin/install -p fit_curve /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_curve libtool: install: /usr/bin/install -p fit_curve2 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_curve2 libtool: install: /usr/bin/install -p fit_3d /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_3d libtool: install: /usr/bin/install -p flatten_polygons /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_polygons libtool: install: /usr/bin/install -p flatten_sheet /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_sheet libtool: install: /usr/bin/install -p flatten_sheet3 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_sheet3 libtool: install: /usr/bin/install -p flatten_to_sphere /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_to_sphere libtool: install: /usr/bin/install -p flatten_to_sphere2 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_to_sphere2 libtool: install: /usr/bin/install -p flip_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flip_tags libtool: install: /usr/bin/install -p flip_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flip_volume libtool: install: /usr/bin/install -p f_prob /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/f_prob libtool: install: /usr/bin/install -p gaussian_blur_peaks /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/gaussian_blur_peaks libtool: install: /usr/bin/install -p get_tic /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/get_tic libtool: install: /usr/bin/install -p group_diff /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/group_diff libtool: install: /usr/bin/install -p histogram_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/histogram_volume libtool: install: /usr/bin/install -p intensity_statistics /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/intensity_statistics libtool: install: /usr/bin/install -p interpolate_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/interpolate_tags libtool: install: /usr/bin/install -p label_sulci /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/label_sulci libtool: install: /usr/bin/install -p labels_to_rgb /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/labels_to_rgb libtool: install: /usr/bin/install -p lookup_labels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/lookup_labels libtool: install: /usr/bin/install -p make_diff_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_diff_volume libtool: install: /usr/bin/install -p make_geodesic_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_geodesic_volume libtool: install: /usr/bin/install -p make_gradient_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_gradient_volume libtool: install: /usr/bin/install -p make_grid_lines /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_grid_lines libtool: install: /usr/bin/install -p make_line_links /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_line_links libtool: install: /usr/bin/install -p make_slice /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_slice libtool: install: /usr/bin/install -p make_surface_bitlist /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_surface_bitlist libtool: install: /usr/bin/install -p make_sphere_transform /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_sphere_transform libtool: install: /usr/bin/install -p map_colours_to_sphere /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_colours_to_sphere libtool: install: /usr/bin/install -p map_surface_to_sheet /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_surface_to_sheet libtool: install: /usr/bin/install -p map_sheets /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_sheets libtool: install: /usr/bin/install -p marching_cubes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/marching_cubes libtool: install: /usr/bin/install -p mask_values /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mask_values libtool: install: /usr/bin/install -p mask_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mask_volume libtool: install: /usr/bin/install -p match_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/match_tags libtool: install: /usr/bin/install -p mincdefrag /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincdefrag libtool: install: /usr/bin/install -p mincmask /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincmask libtool: install: /usr/bin/install -p mincskel /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincskel libtool: install: /usr/bin/install -p minctotag /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/minctotag libtool: install: /usr/bin/install -p minc_to_rgb /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/minc_to_rgb libtool: install: /usr/bin/install -p normalize_pet /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/normalize_pet libtool: install: /usr/bin/install -p place_images /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/place_images libtool: install: /usr/bin/install -p plane_polygon_intersect /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/plane_polygon_intersect libtool: install: /usr/bin/install -p preprocess_segmentation /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/preprocess_segmentation libtool: install: /usr/bin/install -p print_2d_coords /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_2d_coords libtool: install: /usr/bin/install -p print_all_labels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_all_labels libtool: install: /usr/bin/install -p print_all_label_bounding_boxes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_all_label_bounding_boxes libtool: install: /usr/bin/install -p print_axis_angles /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_axis_angles libtool: install: /usr/bin/install -p print_volume_value /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_volume_value libtool: install: /usr/bin/install -p print_world_value /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_world_value libtool: install: /usr/bin/install -p print_world_values /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_world_values libtool: install: /usr/bin/install -p random_warp /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/random_warp libtool: install: /usr/bin/install -p reparameterize_line /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/reparameterize_line libtool: install: /usr/bin/install -p rgb_to_minc /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/rgb_to_minc libtool: install: /usr/bin/install -p scale_minc_image /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scale_minc_image libtool: install: /usr/bin/install -p scan_lines_to_polygons /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scan_lines_to_polygons libtool: install: /usr/bin/install -p scan_object_to_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scan_object_to_volume libtool: install: /usr/bin/install -p segment_probabilities /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/segment_probabilities libtool: install: /usr/bin/install -p spherical_resample /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/spherical_resample libtool: install: /usr/bin/install -p stats_tag_file /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/stats_tag_file libtool: install: /usr/bin/install -p subsample_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/subsample_volume libtool: install: /usr/bin/install -p surface_mask /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/surface_mask libtool: install: /usr/bin/install -p surface_mask2 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/surface_mask2 libtool: install: /usr/bin/install -p tag_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tag_volume libtool: install: /usr/bin/install -p tagtominc /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tagtominc libtool: install: /usr/bin/install -p threshold_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/threshold_volume libtool: install: /usr/bin/install -p trimesh_resample /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_resample libtool: install: /usr/bin/install -p trimesh_set_points /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_set_points libtool: install: /usr/bin/install -p trimesh_to_polygons /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_to_polygons libtool: install: /usr/bin/install -p tags_to_spheres /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tags_to_spheres libtool: install: /usr/bin/install -p transform_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_volume libtool: install: /usr/bin/install -p transform_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_tags libtool: install: /usr/bin/install -p transform_objects /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_objects libtool: install: /usr/bin/install -p two_surface_resample /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/two_surface_resample libtool: install: /usr/bin/install -p volume_object_evaluate /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/volume_object_evaluate /usr/bin/mkdir -p '/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin' /usr/bin/install -p nlfit_smr mritotal_suppress smooth_mask compute_icbm_vols multispectral_stx_registration sphere_resample_obj suppress_fat regional_thickness remap_to_lobes '/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin' make[1]: Nothing to be done for 'install-data-am'. make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' + find /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT -name '*.la' -delete + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 1.6.80-1.20120308git166303d.fc45 --unique-debug-suffix -1.6.80-1.20120308git166303d.fc45.x86_64 --unique-debug-src-base conglomerate-1.6.80-1.20120308git166303d.fc45.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 --remove-section .gnu.build.attributes -S debugsourcefiles.list /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b find-debuginfo: starting Extracting debug info from 132 files DWARF-compressing 132 files sepdebugcrcfix: Updated 132 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/conglomerate-1.6.80-1.20120308git166303d.fc45.x86_64 find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + COMPRESS='gzip -9 -n' + COMPRESS_EXT=.gz + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/bin/remap_to_lobes from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/regional_thickness from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/suppress_fat from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/sphere_resample_obj from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/multispectral_stx_registration from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/compute_icbm_vols from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/smooth_mask from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/mritotal_suppress from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/nlfit_smr from /usr/bin/env perl to #!/usr/bin/perl + /usr/lib/rpm/brp-remove-la-files + /usr/lib/rpm/redhat/brp-python-rpm-in-distinfo + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-det --brp -j4 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT Scanned 11 directories and 428 files, processed 0 inodes, 0 modified (0 replaced + 0 rewritten), 0 unsupported format, 0 errors + /usr/bin/linkdupes --brp /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr Scanned 10 directories and 428 files, considered 428 files, read 113 files, linked 0 files, 0 errors sum of sizes of linked files: 0 bytes Reading /builddir/build/BUILD/conglomerate-1.6.80-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.62B8Cd + umask 022 + cd /builddir/build/BUILD/conglomerate-1.6.80-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b ++ ls -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin ++ wc -l + n=141 141 programs installed + test 141 -eq 141 + echo '141 programs installed' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/add_labels + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/apply_sphere_transform + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/autocrop_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/average_voxels + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/blur_surface + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/box_filter_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/box_filter_volume_nd + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/chamfer_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/chop_tags + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clamp_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/classify_sulcus + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clean_surface_labels + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clip_tags + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/close_surface + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/cluster_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/coalesce_lines + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_left_right + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_left_right_groups + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_lengths + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_images + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_minc_images + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_volumes + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_bounding_view + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_icbm_vols + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_icbm_vols /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_icbm_vols syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_resels + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/concat_images + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/contour_slice + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/convex_hull + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/count_thresholded_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_2d_sheet + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_2d_surface + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_box + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_four_volumes + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_label_map + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_landmark_full_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_mahalanobis + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_surface_interpolation_lsq + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_warping_points + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/diff_mahalanobis + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dilate_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dilate_volume_completely + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dim_image + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_deformation_distances + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_points_to_tag_file + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_rms + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_transform + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_uv + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/evaluate + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/extract_largest_line + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/extract_tag_slice + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/f_prob + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fill_sulci + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_buried_surface + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_image_bounding_box + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_peaks + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_surface_distances + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_tag_outliers + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_vertex + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_volume_centroid + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_3d + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_curve + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_curve2 + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_polygons + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_sheet + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_sheet3 + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_to_sphere + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_to_sphere2 + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flip_tags + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flip_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/gaussian_blur_peaks + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/get_tic + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/group_diff + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/histogram_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/intensity_statistics + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/interpolate_tags + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/label_sulci + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/labels_to_rgb + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/lookup_labels + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_diff_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_geodesic_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_gradient_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_grid_lines + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_line_links + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_slice + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_sphere_transform + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_surface_bitlist + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_colours_to_sphere + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_sheets + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_surface_to_sheet + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/marching_cubes + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mask_values + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mask_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/match_tags + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/minc_to_rgb + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincdefrag + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincmask + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincskel + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/minctotag + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mritotal_suppress + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mritotal_suppress /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mritotal_suppress syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/multispectral_stx_registration + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/multispectral_stx_registration /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/multispectral_stx_registration syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/nlfit_smr + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/nlfit_smr /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/nlfit_smr syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/normalize_pet + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/place_images + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/plane_polygon_intersect + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/preprocess_segmentation + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_2d_coords + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_all_label_bounding_boxes + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_all_labels + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_axis_angles + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_volume_value + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_world_value + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_world_values + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/random_warp + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/regional_thickness + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/regional_thickness /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/regional_thickness syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/remap_to_lobes + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/remap_to_lobes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/remap_to_lobes syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/reparameterize_line + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/rgb_to_minc + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scale_minc_image + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scan_lines_to_polygons + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scan_object_to_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/segment_probabilities + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/smooth_mask + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/smooth_mask /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/smooth_mask syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/sphere_resample_obj + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/sphere_resample_obj /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/sphere_resample_obj syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/spherical_resample + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/stats_tag_file + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/subsample_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/suppress_fat + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/suppress_fat /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/suppress_fat syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/surface_mask + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/surface_mask2 + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tag_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tags_to_spheres + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tagtominc + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/threshold_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_objects + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_tags + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_resample + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_set_points + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_to_polygons + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/two_surface_resample + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/volume_object_evaluate + grep -q '^#!.*perl' + RPM_EC=0 ++ jobs -p + exit 0 Processing files: conglomerate-1.6.80-1.20120308git166303d.fc45.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.Jz0PJX + umask 022 + cd /builddir/build/BUILD/conglomerate-1.6.80-build + cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b + DOCDIR=/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate + cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/AUTHORS /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate + cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/ChangeLog /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate + cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/NEWS /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate + cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/README /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate + cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/TODO /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.OJCn1Y + umask 022 + cd /builddir/build/BUILD/conglomerate-1.6.80-build + cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b + LICENSEDIR=/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/licenses/conglomerate + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/licenses/conglomerate + cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/COPYING /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/licenses/conglomerate + RPM_EC=0 ++ jobs -p + exit 0 Provides: conglomerate = 1.6.80-1.20120308git166303d.fc45 conglomerate(x86-64) = 1.6.80-1.20120308git166303d.fc45 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/perl libbicpl.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.23)(64bit) libm.so.6(GLIBC_2.29)(64bit) libminc2.so.5.3.0()(64bit) libnetcdf.so.22()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: conglomerate-debugsource-1.6.80-1.20120308git166303d.fc45.x86_64 Provides: conglomerate-debugsource = 1.6.80-1.20120308git166303d.fc45 conglomerate-debugsource(x86-64) = 1.6.80-1.20120308git166303d.fc45 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: conglomerate-debuginfo-1.6.80-1.20120308git166303d.fc45.x86_64 Provides: conglomerate-debuginfo = 1.6.80-1.20120308git166303d.fc45 conglomerate-debuginfo(x86-64) = 1.6.80-1.20120308git166303d.fc45 debuginfo(build-id) = 0752c339fcb2fc4d6ab1d5a4fe1e8bab0f91805a debuginfo(build-id) = 07c014fc3ba5fdd2e2e9dede2320bd6859a8be13 debuginfo(build-id) = 07d5069c9c2308f61dd588614c09999389dacb24 debuginfo(build-id) = 0952457b917633beaa4fc78c6c60b2a039a31cbc debuginfo(build-id) = 0a9e5dcb6a6ae47273215ff9c9550d0cf0cd67f1 debuginfo(build-id) = 0a9ecb48f74ad4eb20f84dc462d2b4c4dc1c9212 debuginfo(build-id) = 0c00b38c9057f38c00419e7edf6850f6af9f5c3f debuginfo(build-id) = 0c96eba0e73979ab2f4cd5f2992dc1207d47d0b4 debuginfo(build-id) = 0cb278ad62c00fe84f2bf1c6fdde6dd1eb2d5469 debuginfo(build-id) = 0d58e4a046fd1c8b28212be0ab3243af78b7dbc2 debuginfo(build-id) = 0dd94113bb623a4ef1dbacd2a8c7e13a52e9749a debuginfo(build-id) = 0f46991f1609c096974f93dba60085c7015ad65c debuginfo(build-id) = 130c1b01bd97700dd67efee112f4f4f5f61ac297 debuginfo(build-id) = 171f514182b7f21ac8dabf058b8a1619d990f351 debuginfo(build-id) = 1d76eebb66572c567e8f3eb8a760629cbc1f849c debuginfo(build-id) = 1fe6d09908f8da2179310a302456d5cc35ba9c0d debuginfo(build-id) = 21152c7857d7adb0cdfdb66eb29e9c04d0f30593 debuginfo(build-id) = 21513242aa1634521931b50583541431a2b8da7c debuginfo(build-id) = 26bd9baa96f73a4b368b2397056128d1222b8b87 debuginfo(build-id) = 28ba1ab514b70bde98081f7feead29c8b7d1250a debuginfo(build-id) = 2960682b1596c64df3a55e550dfeb9a4ade43c08 debuginfo(build-id) = 29bbd7e1bbe9c9948800a65ab008f2aba302d672 debuginfo(build-id) = 2dc7a81fc70e768aab2b35597651a10076563c5b debuginfo(build-id) = 2e6b64a113e4f53db8c39fb28f836485d7c51d4a debuginfo(build-id) = 2ee3ee086bb2c5397ec777b8c78ddd47cf112b39 debuginfo(build-id) = 2fcfa91cf6126b564459331b8987089cbeaa725e debuginfo(build-id) = 30d75c08574b49ca9c97d3f4c0cfbe4b68819b1d debuginfo(build-id) = 3126288bf259acf4e6da81a49c8d4cc684d07d0c debuginfo(build-id) = 3129cb39d9c02f8b5caeaa09e1971f60f9550c17 debuginfo(build-id) = 344a036a8d4e672841228dcd17eb01a3d4b1c915 debuginfo(build-id) = 3470a165bf2a33336c6263cdb1bfaf1f7f4fce64 debuginfo(build-id) = 35cafce267109c62c97d1c3c14214c164e38fb3c debuginfo(build-id) = 37ba60300e868c287f8314ca4b0ac10005be5457 debuginfo(build-id) = 3a952169564e2eb3826e0d2f781f4cc4c9cb6d64 debuginfo(build-id) = 3c1e072ab9a435ca844cb8952e863970eafd6b89 debuginfo(build-id) = 3d036fa95bd97c445d772c6887c76d56951f0c5d debuginfo(build-id) = 3f38ea521965a99e7026dd81fdb6e0e7294f564f debuginfo(build-id) = 407501d18119861d695969231aef9ab24b62f66f debuginfo(build-id) = 44bf999f9eb72bef4581be9a1df81f52c1468697 debuginfo(build-id) = 4518d55bd3ebdc70ecf5e91f0b1bcd2ae33defca debuginfo(build-id) = 46b86f41cb92d49a5c7bda740aaf3e252e30da6d debuginfo(build-id) = 4875b6bcfc52ecd30e82a80565769c9339f289c0 debuginfo(build-id) = 4b59211104554747ac9eb70139f8c12d2584d5c5 debuginfo(build-id) = 4b7355f6a1fdd9266574eea3cfa65f3c9cf70a61 debuginfo(build-id) = 4dc59946ddf3867cf08482e1a4b2a1d63c4505dc debuginfo(build-id) = 4e02e5e5aa2e6fe379a3ccb39e3b877dbc876501 debuginfo(build-id) = 506994e6e9ecad20b492bcb20c2bd4230953eaa7 debuginfo(build-id) = 5ac6d9fb9c1bbd23aba7bdd650f34eb36ff84072 debuginfo(build-id) = 5b46dc13022cac14f7e3dd288347f35b74814791 debuginfo(build-id) = 5b8c2f2b3e03c07d880cc1a8bfe5ef3618d20918 debuginfo(build-id) = 5f46e0f3b564fb08734118d3dda55952a0c54649 debuginfo(build-id) = 60875602f5b0227e6f5d3387e4af5e236db3784d debuginfo(build-id) = 61433acd462db41ed0d9d5445acfb58fc8da553b debuginfo(build-id) = 646434a559c491b3ae75ea1251b34b1ec40f87d7 debuginfo(build-id) = 68ed5c9fc4568cd1285fbb8d867c99ad81906dc2 debuginfo(build-id) = 694c600ad0e0d1d5ec77180ab85b8319a92dac99 debuginfo(build-id) = 69c31745dd3069b02c4a2b279168283b40478075 debuginfo(build-id) = 6a6934bb57b924684abf11ebc3688cba2b1e0786 debuginfo(build-id) = 6b2aa0f7618d43db98fbfe16d85764c6a73871cf debuginfo(build-id) = 6eae622ea776969b0c4f665d9fbd0064ff80f985 debuginfo(build-id) = 6fa3038601b49caee2fd0458baedc6399139456b debuginfo(build-id) = 71984d7d36080604deb49293b012cdae6a61f43c debuginfo(build-id) = 736c3466d65c248ca74f72c7ccec1783ef22f836 debuginfo(build-id) = 830a20553e434510dcee5a15ce84c54cf9250ceb debuginfo(build-id) = 830b7492033794b8427022b87bb420d4c3d8c358 debuginfo(build-id) = 842d6431b4483561486b8a0193bb5394b4209235 debuginfo(build-id) = 8ad3579b78430371d465e9dd621eddec13afc44a debuginfo(build-id) = 945bf5f29f735d88773b53300eaf9abec66cbba3 debuginfo(build-id) = 96a9decea50ad941b325e2f09906e79ffb818e51 debuginfo(build-id) = 984a29f886ed26152005f9aaa124d77f52fed8b5 debuginfo(build-id) = 99fba8506a9f1cc69ceb82c13cad58933de7b4d2 debuginfo(build-id) = 9a6077b5f03690059b410e64e17c708e73ded88c debuginfo(build-id) = 9a78dfa20609f428c3444a9790c4405cd2b06863 debuginfo(build-id) = 9cd92bea672583915b4c6d3264694e8a2d73ceea debuginfo(build-id) = 9efd0236540653cb4c4a6c62930fad42d2a60c8d debuginfo(build-id) = a168b5056b46e065e2c228f168a1160f8f850910 debuginfo(build-id) = a1ee7f23ec6b2cdfe8c615dd88b7e663746a9609 debuginfo(build-id) = a54aa568a0192b4a3841f73b6184a286c90e5184 debuginfo(build-id) = a5c3ad14b96078dd30d306eaf64f3e1acbf7d138 debuginfo(build-id) = a6ae16d4bbd56fcb9a0d4f820fb92e474b15bbef debuginfo(build-id) = a7c319667a32c701e95096bc608cf20552185d45 debuginfo(build-id) = a927963ddf270e10cc41d9975775c9509bf9fc29 debuginfo(build-id) = af548673d838f8a7adaa11536dbf58fc4a1aa633 debuginfo(build-id) = b052b31e717cf4766ee89d4e89371ad23416c354 debuginfo(build-id) = b1c5b92c1cefe6d6e047e0775a3d3989cdfbc10b debuginfo(build-id) = b264028db0542abfa5ecce19a69fff99cf58347f debuginfo(build-id) = b526890c98f5caefe7a031d988f9d39b3b2a7618 debuginfo(build-id) = b55f9d58eeeb4a2f09fb29225c4571c1654fabe1 debuginfo(build-id) = b5c9900f3fb6ab01d5ff410119f03fa1dc1607a4 debuginfo(build-id) = b80ea77cdd7d3836c1623379a1dd2ce61a00d501 debuginfo(build-id) = b9b1db67f182178b7b4379b7b30944af567ad7d6 debuginfo(build-id) = bab515e7fb8c94fbb0e7f7aed403186acb617ecc debuginfo(build-id) = bc21fe9207164e561f73869fdaf54d7a6ff8ade1 debuginfo(build-id) = bce14c34991032c7657833ba8304630124993866 debuginfo(build-id) = bd418c046830d122319b3a0b76cf79fdc052a8d9 debuginfo(build-id) = bdf4cd3f0947972f1fc8ef6340d8a68a11e27816 debuginfo(build-id) = c07ce937e1c7a054c67513897820802f38c9eed2 debuginfo(build-id) = c2a0be49f5de525958374d40005b1fd211202d9c debuginfo(build-id) = c31e3200634a688ccb1853c3f134893507c28135 debuginfo(build-id) = c75fd498e1b90fff7a597bec92d8aab5b2b9bb53 debuginfo(build-id) = c9f294a42a2e0856f6f35de960a99136407055f3 debuginfo(build-id) = ca310265b4c47a96ae4d90801790e4cafde7fcbb debuginfo(build-id) = ca86cd79d2a0826d9bba4fb7ff4c3265b6143168 debuginfo(build-id) = ccbfb785291effc8cbef8c773f36f594d09aae52 debuginfo(build-id) = cd5f45535473f0d4d61cae1157384f95ba0aa600 debuginfo(build-id) = d0244977c0e0c86798fc01c90e5771c54ea323be debuginfo(build-id) = d08c3b2aa8e064d22fb961ff8b19a673c3b0c96b debuginfo(build-id) = d4fdb7141abe0d0ccc4aa1f72c27541c0cb81fb2 debuginfo(build-id) = d5449ce0b6d5d12da5b2eeb0a21f9c7fd96c6965 debuginfo(build-id) = d5b520147e31553660bf8514e2f4ca99f976273b debuginfo(build-id) = d6cf14236946c7f8363b441f8e5c707f4e08a96c debuginfo(build-id) = d765773f5efa7c43328da3d6759cdec822302911 debuginfo(build-id) = d76c7161053bc108ab0b3eaaf77bfe0c9986f157 debuginfo(build-id) = d85d92617204e0e00eb38382e79cd6aa540b8de5 debuginfo(build-id) = d8ab15443d8c4fc83f00ad1469051ab6d9d190f9 debuginfo(build-id) = d940e805618f03974e4fff3f8c9217e99d0ef027 debuginfo(build-id) = d99bee8bbf470ca44964e3f94d35f40c51948f0d debuginfo(build-id) = da79ec5d5b098a7ec87b64ff4b59edcbd1f86116 debuginfo(build-id) = dba953e4a1765862ef240bd5259a8a4184bc1664 debuginfo(build-id) = e175a1e5d4efe84be09ea1652c451d9019c47f07 debuginfo(build-id) = e2525d3e01bdcbc96af100ea5708e16d4b94690c debuginfo(build-id) = e4cd4c791e75df1cdf67569ed0cfa3af18f77c1c debuginfo(build-id) = e5a03440e399fd9bea26ff4fc58646ad45e3e646 debuginfo(build-id) = eaac9aff4164f57d8016e413319b2274af3eba8e debuginfo(build-id) = ec49aa1b212ff96fa1f718a95f46fcd1d322141f debuginfo(build-id) = f024f9ddc8d3749ebb15a6e4460b26b48476d330 debuginfo(build-id) = f096ba17ab0a5c1e3ddcfa9ff9dade466453b0e5 debuginfo(build-id) = f11661e1a43d5e68ecd582a118df61c7e13d40e0 debuginfo(build-id) = f16bf73f9825316a0e3cba1cec4aa04c0339eab1 debuginfo(build-id) = f60006cf507e296f4898ea762c30bbb5a71b27cf debuginfo(build-id) = f9fbae4fb1f64cad856692df97c53912c85d5b9b debuginfo(build-id) = fd8b2ff020f8e26ae345a15cac21c2867766660a Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: conglomerate-debugsource(x86-64) = 1.6.80-1.20120308git166303d.fc45 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT Wrote: /builddir/build/RPMS/conglomerate-debugsource-1.6.80-1.20120308git166303d.fc45.x86_64.rpm Wrote: /builddir/build/RPMS/conglomerate-1.6.80-1.20120308git166303d.fc45.x86_64.rpm Wrote: /builddir/build/RPMS/conglomerate-debuginfo-1.6.80-1.20120308git166303d.fc45.x86_64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.JzULPj + umask 022 + cd /builddir/build/BUILD/conglomerate-1.6.80-build + test -d /builddir/build/BUILD/conglomerate-1.6.80-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/conglomerate-1.6.80-build + rm -rf /builddir/build/BUILD/conglomerate-1.6.80-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild conglomerate-1.6.80-1.20120308git166303d.fc45.src.rpm Finish: build phase for conglomerate-1.6.80-1.20120308git166303d.fc45.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-45-x86_64-1790274075.697241/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names INFO: Done(/var/lib/copr-rpmbuild/results/conglomerate-1.6.80-1.20120308git166303d.fc45.src.rpm) Config(child) 0 minutes 46 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "conglomerate-debuginfo", "epoch": null, "version": "1.6.80", "release": "1.20120308git166303d.fc45", "arch": "x86_64" }, { "name": "conglomerate", "epoch": null, "version": "1.6.80", "release": "1.20120308git166303d.fc45", "arch": "src" }, { "name": "conglomerate", "epoch": null, "version": "1.6.80", "release": "1.20120308git166303d.fc45", "arch": "x86_64" }, { "name": "conglomerate-debugsource", "epoch": null, "version": "1.6.80", "release": "1.20120308git166303d.fc45", "arch": "x86_64" } ] } RPMResults finished