%global pypi_name dcm2bids

Name:           python-%{pypi_name}
Version:        3.3.1
Release:        1%{?dist}
Summary:        Reorganize NIfTI files from dcm2niix into BIDS

License:        GPL-3.0-or-later
URL:            https://github.com/UNFmontreal/Dcm2Bids
Source0:        %{pypi_source %{pypi_name}}

BuildArch:      noarch

BuildRequires:  python3-devel

%global _description %{expand:
Dcm2Bids converts DICOM to NIfTI with dcm2niix and reorganizes the result
into a BIDS dataset according to a JSON configuration file that matches
series by their sidecar metadata. BIDS (the Brain Imaging Data Structure) is
the standard layout for neuroimaging datasets used by OpenNeuro, fMRIPrep
and most current pipelines.}

%description %{_description}

%package -n     python3-%{pypi_name}
Summary:        %{summary}

Requires:       dcm2niix

%description -n python3-%{pypi_name} %{_description}


%prep
%autosetup -p1 -n dcm2bids-%{version}
# Fedora rejects ambiguous #!/usr/bin/env python shebangs in installed modules.
find . -name '*.py' -exec sed -i '1s|^#!/usr/bin/env python$|#!%{python3}|' {} +
# Old versioneer.py uses configparser.SafeConfigParser and readfp, both removed in Python 3.12.
if [ -f versioneer.py ] && grep -q SafeConfigParser versioneer.py; then
  sed -i 's/SafeConfigParser/ConfigParser/g; s/\.readfp(/.read_file(/g' versioneer.py
  if grep -qE 'SafeConfigParser|readfp\(' versioneer.py; then exit 1; fi
fi


%generate_buildrequires
export SETUPTOOLS_SCM_PRETEND_VERSION=%{version}
%pyproject_buildrequires


%build
export SETUPTOOLS_SCM_PRETEND_VERSION=%{version}
%pyproject_wheel


%install
%pyproject_install
# Build helpers some DataLad-template projects install at top level; not part of the package.
rm -rf %{buildroot}%{python3_sitelib}/_datalad_buildsupport %{buildroot}%{python3_sitelib}/tools %{buildroot}%{python3_sitelib}/benchmarks %{buildroot}%{python3_sitelib}/tests %{buildroot}%{python3_sitelib}/tests.py
# Old setup.py data_files can drop these at the top of site-packages (osfclient does).
rm -f %{buildroot}%{python3_sitelib}/{LICENSE,VERSION,requirements.txt}
%pyproject_save_files -L dcm2bids


%check
%pyproject_check_import -e 'dcm2bids.tests*' -e 'dcm2bids.*.tests*' -e '*.test_*' -e '*.conftest' -e '*.pytest_plugin'
%{py3_test_envvars} %{buildroot}%{_bindir}/dcm2bids --help > /dev/null
%{py3_test_envvars} %{buildroot}%{_bindir}/dcm2bids_helper --help > /dev/null
%{py3_test_envvars} %{buildroot}%{_bindir}/dcm2bids_scaffold --help > /dev/null


%files -n python3-%{pypi_name} -f %{pyproject_files}
%license LICENSE.txt
%{_bindir}/dcm2bids
%{_bindir}/dcm2bids_helper
%{_bindir}/dcm2bids_scaffold


%changelog
* Mon Oct 12 2026 Morgan Hough <morgan.hough@gmail.com> - 3.3.1-1
- Initial package, for the DataLad extension stack and dandi.