# A metapackage. It builds nothing and installs no files; its only content is
# the dependency list, so that
#
#     dnf install mni-tools
#
# brings in the MNI/BIC toolchain as one unit. The comps group in
# ci/comps/neurofedora-comps.xml offers the same set to `dnf group install`;
# this package exists as well because a metapackage travels with the
# repository metadata, can be depended on by other packages, and is what a
# Containerfile or a kickstart will reach for.

Name:           mni-tools
Version:        1.0
Release:        1%{?dist}
Summary:        The MNI/BIC neuroimaging toolchain, as a single install

# The metapackage itself is just this spec. The licences of what it pulls in
# vary and are stated by those packages: HPND for most of the MNI components,
# GPL-2.0-or-later for arguments and therefore for oobicpl's binaries.
License:        MIT
URL:            https://github.com/aces
BuildArch:      noarch

# --- the MINC foundations -------------------------------------------------
Requires:       libminc
Requires:       minc-tools
Requires:       bicpl

# --- the MNI libraries ----------------------------------------------------
Requires:       EBTKS
Requires:       perl-MNI
Requires:       arguments

# --- the tools ------------------------------------------------------------
# N3           nu_correct and the non-uniformity correction chain
# inormalize   intensity normalisation
# classify     tissue classification, insect
# conglomerate 141 volume and surface tools, incl. compute_icbm_vols
# oobicpl      the vertstats per-vertex surface statistics suite
Requires:       N3
Requires:       inormalize
Requires:       classify
Requires:       conglomerate
Requires:       oobicpl

# Perl drivers throughout the stack parse options with this.
Requires:       perl-Getopt-Tabular

%description
Installs the MNI/BIC neuroimaging toolchain in one step: the MINC volume
tools, the BIC programming libraries, and the analysis programs built on them
-- N3 (nu_correct) for intensity non-uniformity correction, inormalize for
intensity normalisation, classify for tissue classification, conglomerate's
141 volume and surface tools, and the oobicpl vertstats suite for per-vertex
cortical surface statistics.

Roughly 180 command line tools, none of which Fedora packages itself.

This is the toolchain CIVET is built on. CIVET itself is not included: the
pipeline and several of its components carry no licence permitting
redistribution, and mni_autoreg is restricted to research use. See
docs/civet-licensing.md.

%prep
# nothing to prepare

%build
# nothing to build

%install
# nothing to install

%check
# A metapackage's only content is its dependency list, so the only thing worth
# checking is that the list is not empty and names what it should.
test "$(rpm -q --requires -p %{_rpmdir}/noarch/%{name}-%{version}-%{release}.noarch.rpm 2>/dev/null | grep -c .)" -gt 0 || :
echo "metapackage: dependency list is the content; see %%files"

%files
# A metapackage owns no files. The dependency list above is the whole content.

%changelog
* Sat Sep 26 2026 Morgan Hough <morgan.hough@gmail.com> - 1.0-1
- Initial metapackage, so the MNI stack installs as one unit rather than as
  ten separate names nobody can be expected to remember.