Warning: Permanently added '54.198.190.209' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/11031722-fedora-rawhide-x86_64 --chroot fedora-rawhide-x86_64 Version: 1.10 PID: 11869 Logging PID: 11871 Task: {'allow_user_ssh': False, 'appstream': False, 'background': False, 'build_id': 11031722, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': '8fa2e5629be32e84fd2756d1e89d18305e974aad', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/mhough/neurofedora/conglomerate', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'conglomerate', 'package_version': '1.6.80-1.20120308git166303d', 'project_dirname': 'neurofedora', 'project_name': 'neurofedora', 'project_owner': 'mhough', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/mhough/neurofedora/fedora-rawhide-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None, 'repo_gpgcheck': False}], 'sandbox': 'mhough/neurofedora--mhough', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': 0, 'submitter': 'mhough', 'tags': [], 'task_id': '11031722-fedora-rawhide-x86_64', 'timeout': 86400, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/mhough/neurofedora/conglomerate /var/lib/copr-rpmbuild/workspace/workdir-ys__2_eq/conglomerate --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/mhough/neurofedora/conglomerate', '/var/lib/copr-rpmbuild/workspace/workdir-ys__2_eq/conglomerate', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-ys__2_eq/conglomerate'... Running: git checkout 8fa2e5629be32e84fd2756d1e89d18305e974aad -- cmd: ['git', 'checkout', '8fa2e5629be32e84fd2756d1e89d18305e974aad', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-ys__2_eq/conglomerate rc: 0 stdout: stderr: Note: switching to '8fa2e5629be32e84fd2756d1e89d18305e974aad'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 8fa2e56 automatic import of conglomerate Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-ys__2_eq/conglomerate rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading conglomerate-166303d.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -H 'Accept-Encoding: identity' -o conglomerate-166303d.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/mhough/neurofedora/conglomerate/conglomerate-166303d.tar.gz/md5/c98960361683829b3f6ca53f3fdd19ae/conglomerate-166303d.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 452.6k 100 452.6k 0 0 40.78M 0 0 INFO: Reading stdout from command: md5sum conglomerate-166303d.tar.gz INFO: Downloading mni-acmacros.tar.gz INFO: Calling: curl -H Pragma: -H 'Accept-Encoding: identity' -o mni-acmacros.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/mhough/neurofedora/conglomerate/mni-acmacros.tar.gz/md5/319aef208dbf53a6eeede74b258d993d/mni-acmacros.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 12464 100 12464 0 0 1.43M 0 0 INFO: Reading stdout from command: md5sum mni-acmacros.tar.gz tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=86400): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-ys__2_eq/conglomerate/conglomerate.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-ys__2_eq/conglomerate --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1790274095.888052 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 6.8 starting (python version = 3.14.5, NVR = mock-6.8-1.fc44), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-ys__2_eq/conglomerate/conglomerate.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-ys__2_eq/conglomerate --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1790274095.888052 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-ys__2_eq/conglomerate/conglomerate.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 6.8 INFO: Mock Version: 6.8 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1790274095.888052/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using container image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Tagging container image as mock-bootstrap-6b96d23d-147d-4df6-bffe-acdc61f39d82 INFO: Checking that 5df10a9c07b0f654c57d2eff2e9ad3af2812a1b9beb2ee17bf08b8bd6b3c2e74 image matches host's architecture INFO: Copy content of container 5df10a9c07b0f654c57d2eff2e9ad3af2812a1b9beb2ee17bf08b8bd6b3c2e74 to /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1790274095.888052/root INFO: mounting 5df10a9c07b0f654c57d2eff2e9ad3af2812a1b9beb2ee17bf08b8bd6b3c2e74 with podman image mount INFO: image 5df10a9c07b0f654c57d2eff2e9ad3af2812a1b9beb2ee17bf08b8bd6b3c2e74 as /var/lib/containers/storage/overlay/5f00f12c4598c6589614281580740c6e97841b6f415a66eb8f588c8203a38197/merged INFO: umounting image 5df10a9c07b0f654c57d2eff2e9ad3af2812a1b9beb2ee17bf08b8bd6b3c2e74 (/var/lib/containers/storage/overlay/5f00f12c4598c6589614281580740c6e97841b6f415a66eb8f588c8203a38197/merged) with podman image umount INFO: Removing image mock-bootstrap-6b96d23d-147d-4df6-bffe-acdc61f39d82 INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1790274095.888052/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-6.1.0-1.fc46.x86_64 rpm-sequoia-1.10.3-1.fc46.x86_64 dnf5-5.4.5.0-1.fc46.x86_64 dnf5-plugins-5.4.5.0-1.fc46.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: Copr repository 100% | 1.5 MiB/s | 367.6 KiB | 00m00s fedora 100% | 29.3 MiB/s | 21.9 MiB | 00m01s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash x86_64 0:5.3.15-2.fc45 fedora 8.5 MiB bzip2 x86_64 0:1.0.8-24.fc45 fedora 95.0 KiB coreutils x86_64 0:9.12-1.fc46 fedora 6.3 MiB cpio x86_64 0:2.15-10.fc45 fedora 1.1 MiB diffutils x86_64 0:3.12-6.fc45 fedora 1.6 MiB fedora-release-common noarch 0:46-0.1 fedora 4.6 KiB findutils x86_64 1:4.11.0-2.fc45 fedora 1.9 MiB gawk x86_64 0:5.4.1-1.fc45 fedora 2.2 MiB glibc-minimal-langpack x86_64 0:2.44.9000-2.fc46 fedora 0.0 B grep x86_64 0:3.12-4.fc45 fedora 1.0 MiB gzip x86_64 0:1.14-4.fc45 fedora 401.6 KiB info x86_64 0:7.3-3.fc45 fedora 372.4 KiB patch x86_64 0:2.8-5.fc45 fedora 226.6 KiB redhat-rpm-config noarch 0:345-4.fc46 fedora 184.2 KiB rpm-build x86_64 0:6.1.0-1.fc46 fedora 312.1 KiB sed x86_64 0:4.10-2.fc45 fedora 866.5 KiB shadow-utils x86_64 2:4.20.0-1.fc45 fedora 3.9 MiB tar x86_64 2:1.35-9.fc45 fedora 3.0 MiB unzip x86_64 0:6.0-71.fc45 fedora 441.8 KiB util-linux x86_64 0:2.42.4-2.fc46 fedora 3.7 MiB which x86_64 0:2.25-2.fc45 fedora 83.6 KiB xz x86_64 1:5.8.4-1.fc46 fedora 1.4 MiB Installing dependencies: R-srpm-macros noarch 0:1.3.7-3.fc45 fedora 3.5 KiB add-determinism x86_64 0:0.7.3-3.fc45 fedora 2.2 MiB alternatives x86_64 0:1.33-6.fc45 fedora 62.1 KiB ansible-srpm-macros noarch 0:1-22.fc45 fedora 35.7 KiB audit-libs x86_64 0:4.2.1-2.fc45 fedora 390.5 KiB binutils x86_64 0:2.47.50-11.fc46 fedora 24.4 MiB build-reproducibility-srpm-macros noarch 0:0.7.3-3.fc45 fedora 1.2 KiB bzip2-libs x86_64 0:1.0.8-24.fc45 fedora 80.5 KiB ca-certificates noarch 0:2026.2.90_v9.0.317-1.fc46 fedora 2.6 MiB cmake-srpm-macros noarch 0:4.3.0-5.fc45 fedora 524.0 B coreutils-common x86_64 0:9.12-1.fc46 fedora 11.5 MiB crypto-policies noarch 0:20260713-2.gitc42da77.fc45 fedora 134.3 KiB curl x86_64 0:8.23.0~rc1-1.fc46 fedora 485.9 KiB cyrus-sasl-lib x86_64 0:2.1.28-37.fc45 fedora 2.3 MiB debugedit x86_64 0:5.3-3.fc45 fedora 220.8 KiB dwz x86_64 0:0.17-3.fc45 fedora 291.1 KiB ed x86_64 0:1.22.6-1.fc46 fedora 150.9 KiB efi-srpm-macros noarch 0:6-9.fc45 fedora 40.3 KiB elfutils x86_64 0:0.196-1.fc46 fedora 3.2 MiB elfutils-debuginfod-client x86_64 0:0.196-1.fc46 fedora 79.9 KiB elfutils-libelf x86_64 0:0.196-1.fc46 fedora 1.4 MiB elfutils-libs x86_64 0:0.196-1.fc46 fedora 719.6 KiB erlang-srpm-macros noarch 0:0.3.11-2.fc45 fedora 1.9 KiB fedora-gpg-keys noarch 0:46-0.3 fedora 130.3 KiB fedora-release noarch 0:46-0.1 fedora 0.0 B fedora-release-identity-basic noarch 0:46-0.1 fedora 664.0 B fedora-repos noarch 0:46-0.3 fedora 4.9 KiB fedora-repos-rawhide noarch 0:46-0.3 fedora 2.2 KiB file x86_64 0:5.48-3.fc46 fedora 101.9 KiB file-libs x86_64 0:5.48-3.fc46 fedora 12.3 MiB filesystem x86_64 0:3.18-59.fc45 fedora 112.0 B filesystem-srpm-macros noarch 0:3.18-59.fc45 fedora 38.2 KiB fips-provider x86_64 0:1.5.3-1.fc46 fedora 4.8 MiB fonts-srpm-macros noarch 1:5.0.0-4.fc45 fedora 55.8 KiB forge-srpm-macros noarch 0:0.4.0-5.fc45 fedora 38.9 KiB fpc-srpm-macros noarch 0:1.3-17.fc45 fedora 144.0 B gap-srpm-macros noarch 0:2-3.fc45 fedora 2.1 KiB gdb-minimal x86_64 0:17.2-6.fc46 fedora 14.2 MiB gdbm-libs x86_64 1:1.23-12.fc45 fedora 133.7 KiB ghc-srpm-macros noarch 0:1.10-2.fc45 fedora 792.0 B glibc x86_64 0:2.44.9000-2.fc46 fedora 7.2 MiB glibc-common x86_64 0:2.44.9000-2.fc46 fedora 1.0 MiB glibc-gconv-extra x86_64 0:2.44.9000-2.fc46 fedora 7.7 MiB gmp x86_64 1:6.3.0-6.fc45 fedora 815.2 KiB gnat-srpm-macros noarch 0:7-3.fc45 fedora 1.0 KiB gnome-srpm-macros noarch 0:1.0-2.fc45 fedora 3.5 KiB gnulib-l10n noarch 0:20241231-4.fc45 fedora 655.0 KiB gnupg2 x86_64 0:2.4.9-18.fc45 fedora 6.5 MiB gnupg2-dirmngr x86_64 0:2.4.9-18.fc45 fedora 630.1 KiB gnupg2-gpg-agent x86_64 0:2.4.9-18.fc45 fedora 678.8 KiB gnupg2-gpgconf x86_64 0:2.4.9-18.fc45 fedora 253.8 KiB gnupg2-keyboxd x86_64 0:2.4.9-18.fc45 fedora 201.3 KiB gnupg2-verify x86_64 0:2.4.9-18.fc45 fedora 356.3 KiB gnutls x86_64 0:3.8.13-5.fc46 fedora 3.8 MiB go-srpm-macros noarch 0:3.8.0-3.fc45 fedora 61.9 KiB gpgverify noarch 0:2.2-5.fc45 fedora 8.7 KiB ima-evm-utils-libs x86_64 0:1.6.2-12.fc45 fedora 56.6 KiB jansson x86_64 0:2.14-5.fc45 fedora 89.0 KiB java-srpm-macros noarch 0:1-9.fc45 fedora 870.0 B json-c x86_64 0:0.18-9.fc45 fedora 82.7 KiB kernel-srpm-macros noarch 0:1.0-30.fc45 fedora 1.9 KiB keyutils-libs x86_64 0:1.6.3-8.fc45 fedora 54.2 KiB krb5-libs x86_64 0:1.22.2-9.fc45 fedora 2.4 MiB libacl x86_64 0:2.4.0-2.fc45 fedora 43.9 KiB libarchive x86_64 0:3.8.9-2.fc46 fedora 1.0 MiB libassuan x86_64 0:2.5.7-6.fc45 fedora 163.9 KiB libattr x86_64 0:2.6.0-2.fc45 fedora 24.3 KiB libblkid x86_64 0:2.42.4-2.fc46 fedora 282.3 KiB libbrotli x86_64 0:1.2.0-6.fc45 fedora 865.0 KiB libcap x86_64 0:2.78-2.fc45 fedora 208.2 KiB libcap-ng x86_64 0:0.9.6-1.fc46 fedora 68.8 KiB libcbor x86_64 0:0.14.0-3.fc45 fedora 83.5 KiB libcom_err x86_64 0:1.47.4-2.fc45 fedora 63.0 KiB libcurl x86_64 0:8.23.0~rc1-1.fc46 fedora 1.1 MiB libeconf x86_64 0:0.7.9-4.fc45 fedora 64.8 KiB libevent x86_64 0:2.1.13-1.fc46 fedora 980.7 KiB libfdisk x86_64 0:2.42.4-2.fc46 fedora 392.3 KiB libffi x86_64 0:3.8.0-1.fc46 fedora 95.5 KiB libfido2 x86_64 0:1.17.0-5.fc45 fedora 256.5 KiB libfsverity x86_64 0:1.7-4.fc45 fedora 24.4 KiB libgcc x86_64 0:16.2.1-2.fc46.1 fedora 270.7 KiB libgcrypt x86_64 0:1.12.4-1.fc46 fedora 1.7 MiB libgomp x86_64 0:16.2.1-2.fc46.1 fedora 577.5 KiB libgpg-error x86_64 0:1.61-2.fc45 fedora 953.9 KiB libidn2 x86_64 0:2.3.8-4.fc45 fedora 556.4 KiB libksba x86_64 0:1.8.1-1.fc46 fedora 431.9 KiB liblastlog2 x86_64 0:2.42.4-2.fc46 fedora 37.6 KiB libmount x86_64 0:2.42.4-2.fc46 fedora 408.9 KiB libnghttp2 x86_64 0:1.69.0-6.fc46 fedora 166.1 KiB libnghttp3 x86_64 0:1.18.0-1.fc45 fedora 163.4 KiB libpfm x86_64 0:4.13.0-23.fc45 fedora 1.7 MiB libpkgconf x86_64 0:2.5.1-2.fc45 fedora 90.1 KiB libpsl x86_64 0:0.23.3-1.fc46 fedora 80.4 KiB libselinux x86_64 0:3.11-5.fc46 fedora 205.2 KiB libselinux-utils x86_64 0:3.11-5.fc46 fedora 306.0 KiB libsemanage x86_64 0:3.11-4.fc46 fedora 320.6 KiB libsepol x86_64 0:3.11-2.fc45 fedora 866.1 KiB libsmartcols x86_64 0:2.42.4-2.fc46 fedora 188.5 KiB libssh x86_64 0:0.12.2-1.fc45 fedora 725.7 KiB libssh-config noarch 0:0.12.2-1.fc45 fedora 277.0 B libstdc++ x86_64 0:16.2.1-2.fc46.1 fedora 3.1 MiB libtasn1 x86_64 0:4.21.0-2.fc45 fedora 176.6 KiB libtool-ltdl x86_64 0:2.6.2-1.fc46 fedora 70.0 KiB libunistring x86_64 0:1.1-12.fc45 fedora 1.7 MiB libusb1 x86_64 0:1.0.30-2.fc45 fedora 180.1 KiB libuuid x86_64 0:2.42.4-2.fc46 fedora 37.2 KiB libverto x86_64 0:0.3.2-13.fc45 fedora 25.3 KiB libxcrypt x86_64 0:4.5.2-4.fc45 fedora 293.2 KiB libxml2 x86_64 0:2.15.4-1.fc46 fedora 1.7 MiB libzstd x86_64 0:1.5.7-6.fc45 fedora 956.1 KiB linkdupes x86_64 0:0.7.3-3.fc45 fedora 782.1 KiB lua-libs x86_64 0:5.5.1-2.fc46 fedora 298.0 KiB lua-srpm-macros noarch 0:1-18.fc45 fedora 1.3 KiB lz4-libs x86_64 0:1.10.0-5.fc45 fedora 165.3 KiB meson-srpm-macros noarch 0:1.12.1-1.fc46 fedora 1.7 KiB mpfr x86_64 0:4.2.2-4.fc45 fedora 849.2 KiB ncurses-base noarch 0:6.6-3.fc45 fedora 329.7 KiB ncurses-libs x86_64 0:6.6-3.fc45 fedora 969.1 KiB nettle x86_64 0:4.0-5.fc45 fedora 801.9 KiB ngtcp2 x86_64 0:1.22.1-3.fc45 fedora 334.3 KiB ngtcp2-crypto-ossl x86_64 0:1.22.1-3.fc45 fedora 51.6 KiB npth x86_64 0:1.8-5.fc45 fedora 49.5 KiB ocaml-srpm-macros noarch 0:11-4.fc45 fedora 1.9 KiB openblas-srpm-macros noarch 0:2-22.fc45 fedora 112.0 B openldap x86_64 0:2.6.14-1.fc46 fedora 678.9 KiB openssl-libs x86_64 1:4.0.2-3.fc46 fedora 6.7 MiB p11-kit x86_64 0:0.26.5-1.fc45 fedora 2.6 MiB p11-kit-trust x86_64 0:0.26.5-1.fc45 fedora 478.4 KiB package-notes-srpm-macros noarch 0:0.20-2.fc45 fedora 1.6 KiB pam-libs x86_64 0:1.7.2-4.fc45 fedora 134.5 KiB pcre2 x86_64 0:10.47-1.fc45.2 fedora 718.5 KiB pcre2-syntax noarch 0:10.47-1.fc45.2 fedora 281.9 KiB perl-srpm-macros noarch 0:1-65.fc45 fedora 861.0 B pkgconf x86_64 0:2.5.1-2.fc45 fedora 92.7 KiB pkgconf-m4 noarch 0:2.5.1-2.fc45 fedora 14.3 KiB pkgconf-pkg-config x86_64 0:2.5.1-2.fc45 fedora 989.0 B policycoreutils x86_64 0:3.11-2.fc45 fedora 892.9 KiB popt x86_64 0:1.19-11.fc45 fedora 136.7 KiB publicsuffix-list-dafsa noarch 0:20260624-2.fc45 fedora 71.3 KiB pyproject-srpm-macros noarch 0:1.23.2-1.fc45 fedora 3.4 KiB python-srpm-macros noarch 0:3.15-2.fc45 fedora 51.6 KiB qt5-srpm-macros noarch 0:5.15.18-3.fc45 fedora 500.0 B qt6-srpm-macros noarch 0:6.11.2-1.fc46 fedora 472.0 B readline x86_64 0:8.3-6.fc45 fedora 515.5 KiB redhat-systemd-presets noarch 0:102-3.fc45 fedora 1.0 KiB redhat-systemd-presets-common noarch 0:102-3.fc45 fedora 16.9 KiB rpm x86_64 0:6.1.0-1.fc46 fedora 3.1 MiB rpm-build-libs x86_64 0:6.1.0-1.fc46 fedora 288.3 KiB rpm-libs x86_64 0:6.1.0-1.fc46 fedora 1.1 MiB rpm-plugin-selinux x86_64 0:6.1.0-1.fc46 fedora 11.9 KiB rpm-sequoia x86_64 0:1.10.3-1.fc46 fedora 2.4 MiB rpm-sign-libs x86_64 0:6.1.0-1.fc46 fedora 39.6 KiB rust-srpm-macros noarch 0:28.5-2.fc45 fedora 5.5 KiB selinux-policy noarch 0:45.19-1.fc46 fedora 32.1 KiB selinux-policy-targeted noarch 0:45.19-1.fc46 fedora 19.0 MiB setup noarch 0:2.15.1-2.fc45 fedora 725.6 KiB sqlite-libs x86_64 0:3.53.4-1.fc45 fedora 1.6 MiB systemd-libs x86_64 0:262-1.fc46 fedora 2.8 MiB systemd-standalone-sysusers x86_64 0:262-1.fc46 fedora 981.3 KiB tpm2-tss x86_64 0:4.2.0-1.fc45 fedora 1.7 MiB tree-sitter-srpm-macros noarch 0:0.4.6-2.fc45 fedora 8.6 KiB util-linux-core x86_64 0:2.42.4-2.fc46 fedora 1.5 MiB xxhash-libs x86_64 0:0.8.4-1.fc46 fedora 94.0 KiB xz-libs x86_64 1:5.8.4-1.fc46 fedora 221.7 KiB zig-srpm-macros noarch 0:1-9.fc45 fedora 1.3 KiB zip x86_64 0:3.0-46.fc45 fedora 694.1 KiB zlib-ng-compat x86_64 0:2.3.3-6.fc45 fedora 165.6 KiB zstd x86_64 0:1.5.7-6.fc45 fedora 502.6 KiB Installing groups: Buildsystem building group Transaction Summary: Installing: 190 packages Total size of inbound packages is 71 MiB. Need to download 71 MiB. After this operation, 230 MiB extra will be used (install 230 MiB, remove 0 B). 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rpm-build-0:6.1.0-1.fc46.x86_ 100% | 38.6 MiB/s | 158.1 KiB | 00m00s [ 15/190] sed-0:4.10-2.fc45.x86_64 100% | 63.1 MiB/s | 322.8 KiB | 00m00s [ 16/190] unzip-0:6.0-71.fc45.x86_64 100% | 24.4 MiB/s | 199.6 KiB | 00m00s [ 17/190] tar-2:1.35-9.fc45.x86_64 100% | 77.0 MiB/s | 867.4 KiB | 00m00s [ 18/190] shadow-utils-2:4.20.0-1.fc45. 100% | 94.4 MiB/s | 1.4 MiB | 00m00s [ 19/190] which-0:2.25-2.fc45.x86_64 100% | 10.3 MiB/s | 42.2 KiB | 00m00s [ 20/190] xz-1:5.8.4-1.fc46.x86_64 100% | 127.8 MiB/s | 654.4 KiB | 00m00s [ 21/190] gawk-0:5.4.1-1.fc45.x86_64 100% | 117.8 MiB/s | 1.2 MiB | 00m00s [ 22/190] util-linux-0:2.42.4-2.fc46.x8 100% | 105.4 MiB/s | 1.3 MiB | 00m00s [ 23/190] filesystem-0:3.18-59.fc45.x86 100% | 106.8 MiB/s | 1.8 MiB | 00m00s [ 24/190] ncurses-libs-0:6.6-3.fc45.x86 100% | 42.0 MiB/s | 343.7 KiB | 00m00s [ 25/190] bzip2-libs-0:1.0.8-24.fc45.x8 100% | 8.5 MiB/s | 43.5 KiB | 00m00s [ 26/190] glibc-0:2.44.9000-2.fc46.x86_ 100% | 123.5 MiB/s | 2.5 MiB | 00m00s [ 27/190] 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MiB/s | 456.8 KiB | 00m00s [143/190] libksba-0:1.8.1-1.fc46.x86_64 100% | 33.7 MiB/s | 172.6 KiB | 00m00s [144/190] gnutls-0:3.8.13-5.fc46.x86_64 100% | 158.0 MiB/s | 1.4 MiB | 00m00s [145/190] openldap-0:2.6.14-1.fc46.x86_ 100% | 44.4 MiB/s | 272.6 KiB | 00m00s [146/190] libusb1-0:1.0.30-2.fc45.x86_6 100% | 20.5 MiB/s | 83.8 KiB | 00m00s [147/190] libidn2-0:2.3.8-4.fc45.x86_64 100% | 57.0 MiB/s | 175.2 KiB | 00m00s [148/190] libtasn1-0:4.21.0-2.fc45.x86_ 100% | 24.7 MiB/s | 75.9 KiB | 00m00s [149/190] libunistring-0:1.1-12.fc45.x8 100% | 106.6 MiB/s | 545.8 KiB | 00m00s [150/190] nettle-0:4.0-5.fc45.x86_64 100% | 59.9 MiB/s | 429.7 KiB | 00m00s [151/190] p11-kit-0:0.26.5-1.fc45.x86_6 100% | 68.4 MiB/s | 560.0 KiB | 00m00s [152/190] cyrus-sasl-lib-0:2.1.28-37.fc 100% | 88.7 MiB/s | 817.8 KiB | 00m00s [153/190] libevent-0:2.1.13-1.fc46.x86_ 100% | 47.1 MiB/s | 289.4 KiB | 00m00s [154/190] libtool-ltdl-0:2.6.2-1.fc46.x 100% | 7.2 MiB/s | 36.8 KiB | 00m00s [155/190] libffi-0:3.8.0-1.fc46.x86_64 100% | 22.7 MiB/s | 46.4 KiB | 00m00s [156/190] gdbm-libs-1:1.23-12.fc45.x86_ 100% | 19.0 MiB/s | 58.2 KiB | 00m00s [157/190] alternatives-0:1.33-6.fc45.x8 100% | 9.6 MiB/s | 39.4 KiB | 00m00s [158/190] jansson-0:2.14-5.fc45.x86_64 100% | 11.5 MiB/s | 46.9 KiB | 00m00s [159/190] pkgconf-pkg-config-0:2.5.1-2. 100% | 3.1 MiB/s | 9.5 KiB | 00m00s [160/190] pkgconf-0:2.5.1-2.fc45.x86_64 100% | 9.6 MiB/s | 49.0 KiB | 00m00s [161/190] pkgconf-m4-0:2.5.1-2.fc45.noa 100% | 2.7 MiB/s | 13.8 KiB | 00m00s [162/190] libpkgconf-0:2.5.1-2.fc45.x86 100% | 8.3 MiB/s | 42.6 KiB | 00m00s [163/190] p11-kit-trust-0:0.26.5-1.fc45 100% | 20.4 MiB/s | 146.3 KiB | 00m00s [164/190] binutils-0:2.47.50-11.fc46.x8 100% | 140.3 MiB/s | 5.2 MiB | 00m00s [165/190] fedora-release-0:46-0.1.noarc 100% | 625.9 KiB/s | 11.9 KiB | 00m00s [166/190] systemd-standalone-sysusers-0 100% | 28.2 MiB/s | 433.2 KiB | 00m00s [167/190] fedora-release-identity-basic 100% | 6.2 MiB/s | 12.7 KiB | 00m00s [168/190] xxhash-libs-0:0.8.4-1.fc46.x8 100% | 13.4 MiB/s | 41.3 KiB | 00m00s [169/190] libcurl-0:8.23.0~rc1-1.fc46.x 100% | 68.8 MiB/s | 493.2 KiB | 00m00s [170/190] krb5-libs-0:1.22.2-9.fc45.x86 100% | 65.4 MiB/s | 803.1 KiB | 00m00s [171/190] libbrotli-0:1.2.0-6.fc45.x86_ 100% | 42.4 MiB/s | 347.3 KiB | 00m00s [172/190] libnghttp2-0:1.69.0-6.fc46.x8 100% | 15.1 MiB/s | 77.2 KiB | 00m00s [173/190] gdb-minimal-0:17.2-6.fc46.x86 100% | 163.4 MiB/s | 4.7 MiB | 00m00s [174/190] libnghttp3-0:1.18.0-1.fc45.x8 100% | 8.2 MiB/s | 75.1 KiB | 00m00s [175/190] libpsl-0:0.23.3-1.fc46.x86_64 100% | 9.4 MiB/s | 67.7 KiB | 00m00s [176/190] ngtcp2-0:1.22.1-3.fc45.x86_64 100% | 51.3 MiB/s | 157.7 KiB | 00m00s [177/190] ngtcp2-crypto-ossl-0:1.22.1-3 100% | 9.1 MiB/s | 27.8 KiB | 00m00s [178/190] libssh-0:0.12.2-1.fc45.x86_64 100% | 57.8 MiB/s | 295.9 KiB | 00m00s [179/190] keyutils-libs-0:1.6.3-8.fc45. 100% | 10.2 MiB/s | 31.5 KiB | 00m00s [180/190] libcom_err-0:1.47.4-2.fc45.x8 100% | 8.7 MiB/s | 26.6 KiB | 00m00s [181/190] libverto-0:0.3.2-13.fc45.x86_ 100% | 10.2 MiB/s | 21.0 KiB | 00m00s [182/190] libssh-config-0:0.12.2-1.fc45 100% | 4.4 MiB/s | 8.9 KiB | 00m00s [183/190] publicsuffix-list-dafsa-0:202 100% | 19.9 MiB/s | 61.1 KiB | 00m00s [184/190] libfido2-0:1.17.0-5.fc45.x86_ 100% | 34.8 MiB/s | 106.9 KiB | 00m00s [185/190] libcbor-0:0.14.0-3.fc45.x86_6 100% | 12.0 MiB/s | 36.8 KiB | 00m00s [186/190] policycoreutils-0:3.11-2.fc45 100% | 63.7 MiB/s | 261.0 KiB | 00m00s [187/190] selinux-policy-0:45.19-1.fc46 100% | 13.3 MiB/s | 41.0 KiB | 00m00s [188/190] libselinux-utils-0:3.11-5.fc4 100% | 30.2 MiB/s | 123.8 KiB | 00m00s [189/190] rpm-plugin-selinux-0:6.1.0-1. 100% | 4.3 MiB/s | 17.8 KiB | 00m00s [190/190] selinux-policy-targeted-0:45. 100% | 243.5 MiB/s | 6.8 MiB | 00m00s -------------------------------------------------------------------------------- [190/190] Total 100% | 159.8 MiB/s | 71.4 MiB | 00m00s Running transaction Importing OpenPGP key 0x91211FCE: UserID : "Fedora (46) " Fingerprint: D924B10D3E810DABDD8B56B596E7E91491211FCE From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-46-primary The key was successfully imported. Importing OpenPGP key 0x91211FCE: UserID : "Fedora (46) " Fingerprint: D924B10D3E810DABDD8B56B596E7E91491211FCE From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-46-primary The key was successfully imported. Importing OpenPGP key 0xF577861E: UserID : "Fedora (45) " Fingerprint: 4F50A6114CD5C6976A7F1179655A4B02F577861E From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-45-primary The key was successfully imported. Importing OpenPGP key 0x9488FB64: UserID : "Fedora (47) " Fingerprint: B2E766FA50CA6FA2D5ED06FC09D879E09488FB64 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-47-primary The key was successfully imported. [ 1/192] Verify package files 100% | 725.0 B/s | 190.0 B | 00m00s >>> Running %pretrans scriptlet: filesystem-0:3.18-59.fc45.x86_64 >>> Finished %pretrans scriptlet: filesystem-0:3.18-59.fc45.x86_64 >>> [RPM] failed to open /var/lib/mock/fedora-rawhide-x86_64-1790274095.888052/root/etc/group for id/name lookup: No such file or directory [ 2/192] Prepare transaction 100% | 3.6 KiB/s | 190.0 B | 00m00s [ 3/192] Installing libgcc-0:16.2.1-2. 100% | 266.0 MiB/s | 272.4 KiB | 00m00s [ 4/192] Installing redhat-systemd-pre 100% | 0.0 B/s | 1.5 KiB | 00m00s [ 5/192] Installing redhat-systemd-pre 100% | 0.0 B/s | 18.1 KiB | 00m00s [ 6/192] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 7/192] Installing publicsuffix-list- 100% | 0.0 B/s | 72.0 KiB | 00m00s [ 8/192] Installing fedora-release-ide 100% | 0.0 B/s | 920.0 B | 00m00s [ 9/192] Installing fedora-gpg-keys-0: 100% | 59.2 MiB/s | 181.7 KiB | 00m00s [ 10/192] Installing fedora-repos-rawhi 100% | 0.0 B/s | 2.5 KiB | 00m00s [ 11/192] Installing fedora-repos-0:46- 100% | 0.0 B/s | 5.9 KiB | 00m00s [ 12/192] Installing fedora-release-com 100% | 0.0 B/s | 8.0 KiB | 00m00s [ 13/192] Installing fedora-release-0:4 100% | 17.3 KiB/s | 124.0 B | 00m00s >>> Running sysusers scriptlet: setup-0:2.15.1-2.fc45.noarch >>> Finished sysusers scriptlet: setup-0:2.15.1-2.fc45.noarch >>> Scriptlet output: >>> Creating group 'adm' with GID 4. >>> Creating group 'audio' with GID 63. >>> Creating group 'cdrom' with GID 11. >>> Creating group 'clock' with GID 103. >>> Creating group 'dialout' with GID 18. >>> Creating group 'disk' with GID 6. >>> Creating group 'floppy' with GID 19. >>> Creating group 'ftp' with GID 50. >>> Creating group 'games' with GID 20. >>> Creating group 'input' with GID 104. >>> Creating group 'kmem' with GID 9. >>> Creating group 'kvm' with GID 36. >>> Creating group 'lock' with GID 54. >>> Creating group 'lp' with GID 7. >>> Creating group 'mail' with GID 12. >>> Creating group 'man' with GID 15. >>> Creating group 'mem' with GID 8. >>> Creating group 'nobody' with GID 65534. >>> Creating group 'render' with GID 105. >>> Creating group 'root' with GID 0. >>> Creating group 'sgx' with GID 106. >>> Creating group 'sys' with GID 3. >>> Creating group 'tape' with GID 33. >>> Creating group 'tty' with GID 5. >>> Creating group 'users' with GID 100. >>> Creating group 'utmp' with GID 22. >>> Creating group 'video' with GID 39. >>> Creating group 'wheel' with GID 10. >>> Creating user 'adm' (adm) with UID 3 and GID 4. >>> Creating group 'bin' with GID 1. >>> Creating user 'bin' (bin) with UID 1 and GID 1. >>> Creating group 'daemon' with GID 2. >>> Creating user 'daemon' (daemon) with UID 2 and GID 2. >>> Creating user 'ftp' (FTP User) with UID 14 and GID 50. >>> Creating user 'games' (games) with UID 12 and GID 100. >>> Creating user 'halt' (halt) with UID 7 and GID 0. >>> Creating user 'lp' (lp) with UID 4 and GID 7. >>> Creating user 'mail' (mail) with UID 8 and GID 12. >>> Creating user 'nobody' (Kernel Overflow User) with UID 65534 and GID 65534. >>> Creating user 'operator' (operator) with UID 11 and GID 0. >>> Creating user 'root' (Super User) with UID 0 and GID 0. >>> Creating user 'shutdown' (shutdown) with UID 6 and GID 0. >>> Creating user 'sync' (sync) with UID 5 and GID 0. >>> [ 14/192] Installing setup-0:2.15.1-2.f 100% | 42.0 MiB/s | 731.3 KiB | 00m00s >>> [RPM] /etc/hosts created as /etc/hosts.rpmnew [ 15/192] Installing filesystem-0:3.18- 100% | 2.8 MiB/s | 253.6 KiB | 00m00s [ 16/192] Installing pkgconf-m4-0:2.5.1 100% | 0.0 B/s | 14.7 KiB | 00m00s [ 17/192] Installing pcre2-syntax-0:10. 100% | 277.7 MiB/s | 284.3 KiB | 00m00s [ 18/192] Installing gnulib-l10n-0:2024 100% | 215.5 MiB/s | 661.9 KiB | 00m00s [ 19/192] Installing coreutils-common-0 100% | 428.2 MiB/s | 11.6 MiB | 00m00s [ 20/192] Installing ncurses-base-0:6.6 100% | 115.7 MiB/s | 355.3 KiB | 00m00s [ 21/192] Installing bash-0:5.3.15-2.fc 100% | 256.8 MiB/s | 8.5 MiB | 00m00s [ 22/192] Installing glibc-common-0:2.4 100% | 51.5 MiB/s | 1.0 MiB | 00m00s [ 23/192] Installing glibc-gconv-extra- 100% | 338.6 MiB/s | 7.8 MiB | 00m00s [ 24/192] Installing glibc-0:2.44.9000- 100% | 188.7 MiB/s | 7.2 MiB | 00m00s [ 25/192] Installing ncurses-libs-0:6.6 100% | 238.0 MiB/s | 974.9 KiB | 00m00s [ 26/192] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 27/192] Installing zlib-ng-compat-0:2 100% | 162.5 MiB/s | 166.4 KiB | 00m00s [ 28/192] Installing bzip2-libs-0:1.0.8 100% | 0.0 B/s | 81.6 KiB | 00m00s [ 29/192] Installing libgpg-error-0:1.6 100% | 52.1 MiB/s | 959.7 KiB | 00m00s [ 30/192] Installing readline-0:8.3-6.f 100% | 252.8 MiB/s | 517.7 KiB | 00m00s [ 31/192] Installing libstdc++-0:16.2.1 100% | 440.9 MiB/s | 3.1 MiB | 00m00s [ 32/192] Installing libzstd-0:1.5.7-6. 100% | 467.5 MiB/s | 957.4 KiB | 00m00s [ 33/192] Installing elfutils-libelf-0: 100% | 481.0 MiB/s | 1.4 MiB | 00m00s [ 34/192] Installing libassuan-0:2.5.7- 100% | 161.8 MiB/s | 165.7 KiB | 00m00s [ 35/192] Installing libgcrypt-0:1.12.4 100% | 416.6 MiB/s | 1.7 MiB | 00m00s [ 36/192] Installing gmp-1:6.3.0-6.fc45 100% | 399.1 MiB/s | 817.4 KiB | 00m00s [ 37/192] Installing libacl-0:2.4.0-2.f 100% | 0.0 B/s | 44.7 KiB | 00m00s [ 38/192] Installing systemd-libs-0:262 100% | 395.7 MiB/s | 2.8 MiB | 00m00s [ 39/192] Installing libuuid-0:2.42.4-2 100% | 0.0 B/s | 38.2 KiB | 00m00s [ 40/192] Installing popt-0:1.19-11.fc4 100% | 70.0 MiB/s | 143.3 KiB | 00m00s [ 41/192] Installing xz-libs-1:5.8.4-1. 100% | 217.6 MiB/s | 222.8 KiB | 00m00s [ 42/192] Installing sqlite-libs-0:3.53 100% | 404.7 MiB/s | 1.6 MiB | 00m00s [ 43/192] Installing npth-0:1.8-5.fc45. 100% | 0.0 B/s | 50.6 KiB | 00m00s [ 44/192] Installing elfutils-libs-0:0. 100% | 352.2 MiB/s | 721.3 KiB | 00m00s [ 45/192] Installing libblkid-0:2.42.4- 100% | 276.6 MiB/s | 283.3 KiB | 00m00s [ 46/192] Installing libsepol-0:3.11-2. 100% | 423.4 MiB/s | 867.1 KiB | 00m00s [ 47/192] Installing gnupg2-gpgconf-0:2 100% | 15.6 MiB/s | 255.9 KiB | 00m00s [ 48/192] Installing pcre2-0:10.47-1.fc 100% | 351.5 MiB/s | 720.0 KiB | 00m00s [ 49/192] Installing libselinux-0:3.11- 100% | 201.6 MiB/s | 206.4 KiB | 00m00s [ 50/192] Installing grep-0:3.12-4.fc45 100% | 52.8 MiB/s | 1.0 MiB | 00m00s [ 51/192] Installing sed-0:4.10-2.fc45. 100% | 45.0 MiB/s | 874.9 KiB | 00m00s [ 52/192] Installing findutils-1:4.11.0 100% | 97.9 MiB/s | 2.0 MiB | 00m00s [ 53/192] Installing libxcrypt-0:4.5.2- 100% | 289.0 MiB/s | 295.9 KiB | 00m00s [ 54/192] Installing json-c-0:0.18-9.fc 100% | 0.0 B/s | 83.9 KiB | 00m00s [ 55/192] Installing libtasn1-0:4.21.0- 100% | 174.3 MiB/s | 178.5 KiB | 00m00s [ 56/192] Installing libunistring-0:1.1 100% | 433.6 MiB/s | 1.7 MiB | 00m00s [ 57/192] Installing libidn2-0:2.3.8-4. 100% | 61.0 MiB/s | 562.6 KiB | 00m00s [ 58/192] Installing crypto-policies-0: 100% | 38.9 MiB/s | 159.5 KiB | 00m00s [ 59/192] Installing xz-1:5.8.4-1.fc46. 100% | 67.9 MiB/s | 1.4 MiB | 00m00s [ 60/192] Installing libmount-0:2.42.4- 100% | 400.4 MiB/s | 410.0 KiB | 00m00s [ 61/192] Installing gnupg2-verify-0:2. 100% | 20.5 MiB/s | 357.7 KiB | 00m00s [ 62/192] Installing mpfr-0:4.2.2-4.fc4 100% | 277.0 MiB/s | 850.9 KiB | 00m00s [ 63/192] Installing gawk-0:5.4.1-1.fc4 100% | 106.1 MiB/s | 2.2 MiB | 00m00s [ 64/192] Installing dwz-0:0.17-3.fc45. 100% | 17.9 MiB/s | 292.5 KiB | 00m00s [ 65/192] Installing libksba-0:1.8.1-1. 100% | 424.2 MiB/s | 434.4 KiB | 00m00s [ 66/192] Installing unzip-0:6.0-71.fc4 100% | 27.2 MiB/s | 445.3 KiB | 00m00s [ 67/192] Installing file-libs-0:5.48-3 100% | 726.1 MiB/s | 12.3 MiB | 00m00s [ 68/192] Installing file-0:5.48-3.fc46 100% | 6.7 MiB/s | 103.4 KiB | 00m00s [ 69/192] Installing diffutils-0:3.12-6 100% | 78.2 MiB/s | 1.6 MiB | 00m00s [ 70/192] Installing libattr-0:2.6.0-2. 100% | 0.0 B/s | 25.2 KiB | 00m00s [ 71/192] Installing libeconf-0:0.7.9-4 100% | 64.9 MiB/s | 66.4 KiB | 00m00s [ 72/192] Installing libcap-ng-0:0.9.6- 100% | 0.0 B/s | 70.6 KiB | 00m00s [ 73/192] Installing audit-libs-0:4.2.1 100% | 383.9 MiB/s | 393.1 KiB | 00m00s [ 74/192] Installing pam-libs-0:1.7.2-4 100% | 133.7 MiB/s | 136.9 KiB | 00m00s [ 75/192] Installing libcap-0:2.78-2.fc 100% | 13.0 MiB/s | 213.3 KiB | 00m00s [ 76/192] Installing libsemanage-0:3.11 100% | 314.8 MiB/s | 322.4 KiB | 00m00s [ 77/192] Installing libsmartcols-0:2.4 100% | 185.2 MiB/s | 189.6 KiB | 00m00s [ 78/192] Installing lua-libs-0:5.5.1-2 100% | 292.4 MiB/s | 299.4 KiB | 00m00s [ 79/192] Installing libffi-0:3.8.0-1.f 100% | 94.6 MiB/s | 96.9 KiB | 00m00s [ 80/192] Installing p11-kit-0:0.26.5-1 100% | 119.8 MiB/s | 2.6 MiB | 00m00s [ 81/192] Installing alternatives-0:1.3 100% | 4.1 MiB/s | 63.6 KiB | 00m00s [ 82/192] Installing p11-kit-trust-0:0. 100% | 20.4 MiB/s | 480.1 KiB | 00m00s [ 83/192] Installing ngtcp2-0:1.22.1-3. 100% | 164.0 MiB/s | 335.8 KiB | 00m00s [ 84/192] Installing util-linux-core-0: 100% | 72.0 MiB/s | 1.5 MiB | 00m00s [ 85/192] Installing liblastlog2-0:2.42 100% | 7.8 MiB/s | 39.8 KiB | 00m00s [ 86/192] Installing zip-0:3.0-46.fc45. 100% | 37.9 MiB/s | 698.0 KiB | 00m00s [ 87/192] Installing gnupg2-keyboxd-0:2 100% | 39.6 MiB/s | 202.5 KiB | 00m00s [ 88/192] Installing libpsl-0:0.23.3-1. 100% | 79.6 MiB/s | 81.5 KiB | 00m00s [ 89/192] Installing tar-2:1.35-9.fc45. 100% | 123.9 MiB/s | 3.0 MiB | 00m00s [ 90/192] Installing linkdupes-0:0.7.3- 100% | 45.0 MiB/s | 783.5 KiB | 00m00s [ 91/192] Installing libselinux-utils-0 100% | 18.4 MiB/s | 320.4 KiB | 00m00s [ 92/192] Installing libfdisk-0:2.42.4- 100% | 384.0 MiB/s | 393.2 KiB | 00m00s [ 93/192] Installing fips-provider-0:1. 100% | 439.0 MiB/s | 4.8 MiB | 00m00s [ 94/192] Installing openssl-libs-1:4.0 100% | 417.7 MiB/s | 6.7 MiB | 00m00s [ 95/192] Installing coreutils-0:9.12-1 100% | 181.5 MiB/s | 6.4 MiB | 00m00s [ 96/192] Installing ca-certificates-0: 100% | 2.4 MiB/s | 2.5 MiB | 00m01s [ 97/192] Installing gzip-0:1.14-4.fc45 100% | 20.9 MiB/s | 407.2 KiB | 00m00s [ 98/192] Installing util-linux-0:2.42. 100% | 101.5 MiB/s | 3.8 MiB | 00m00s [ 99/192] Installing policycoreutils-0: 100% | 33.3 MiB/s | 921.4 KiB | 00m00s [100/192] Installing selinux-policy-0:4 100% | 1.9 MiB/s | 34.5 KiB | 00m00s [101/192] Installing selinux-policy-tar 100% | 222.8 MiB/s | 15.1 MiB | 00m00s [102/192] Installing rpm-sequoia-0:1.10 100% | 349.6 MiB/s | 2.4 MiB | 00m00s [103/192] Installing libfsverity-0:1.7- 100% | 0.0 B/s | 25.4 KiB | 00m00s [104/192] Installing libevent-0:2.1.13- 100% | 320.5 MiB/s | 984.5 KiB | 00m00s [105/192] Installing ngtcp2-crypto-ossl 100% | 0.0 B/s | 52.5 KiB | 00m00s [106/192] Installing libusb1-0:1.0.30-2 100% | 14.8 MiB/s | 181.8 KiB | 00m00s >>> Running sysusers scriptlet: tpm2-tss-0:4.2.0-1.fc45.x86_64 >>> Finished sysusers scriptlet: tpm2-tss-0:4.2.0-1.fc45.x86_64 >>> Scriptlet output: >>> Creating group 'tss' with GID 59. >>> Creating user 'tss' (Account used for TPM access) with UID 59 and GID 59. >>> [107/192] Installing tpm2-tss-0:4.2.0-1 100% | 333.5 MiB/s | 1.7 MiB | 00m00s [108/192] Installing ima-evm-utils-libs 100% | 0.0 B/s | 57.9 KiB | 00m00s [109/192] Installing gnupg2-gpg-agent-0 100% | 27.8 MiB/s | 682.8 KiB | 00m00s [110/192] Installing nettle-0:4.0-5.fc4 100% | 393.1 MiB/s | 805.0 KiB | 00m00s [111/192] Installing gnutls-0:3.8.13-5. 100% | 426.4 MiB/s | 3.8 MiB | 00m00s [112/192] Installing zstd-0:1.5.7-6.fc4 100% | 29.1 MiB/s | 506.1 KiB | 00m00s [113/192] Installing libxml2-0:2.15.4-1 100% | 87.1 MiB/s | 1.7 MiB | 00m00s [114/192] Installing bzip2-0:1.0.8-24.f 100% | 6.1 MiB/s | 99.5 KiB | 00m00s [115/192] Installing add-determinism-0: 100% | 102.8 MiB/s | 2.2 MiB | 00m00s [116/192] Installing build-reproducibil 100% | 0.0 B/s | 1.5 KiB | 00m00s [117/192] Installing cpio-0:2.15-10.fc4 100% | 61.3 MiB/s | 1.1 MiB | 00m00s [118/192] Installing ed-0:1.22.6-1.fc46 100% | 9.3 MiB/s | 153.2 KiB | 00m00s [119/192] Installing patch-0:2.8-5.fc45 100% | 13.9 MiB/s | 228.1 KiB | 00m00s [120/192] Installing libpfm-0:4.13.0-23 100% | 576.1 MiB/s | 1.7 MiB | 00m00s [121/192] Installing lz4-libs-0:1.10.0- 100% | 162.5 MiB/s | 166.4 KiB | 00m00s [122/192] Installing libarchive-0:3.8.9 100% | 327.4 MiB/s | 1.0 MiB | 00m00s [123/192] Installing libgomp-0:16.2.1-2 100% | 565.4 MiB/s | 578.9 KiB | 00m00s [124/192] Installing libtool-ltdl-0:2.6 100% | 0.0 B/s | 71.1 KiB | 00m00s [125/192] Installing gdbm-libs-1:1.23-1 100% | 132.2 MiB/s | 135.4 KiB | 00m00s [126/192] Installing cyrus-sasl-lib-0:2 100% | 116.9 MiB/s | 2.3 MiB | 00m00s [127/192] Installing openldap-0:2.6.14- 100% | 333.3 MiB/s | 682.7 KiB | 00m00s [128/192] Installing gnupg2-dirmngr-0:2 100% | 26.9 MiB/s | 632.8 KiB | 00m00s [129/192] Installing gnupg2-0:2.4.9-18. 100% | 216.7 MiB/s | 6.5 MiB | 00m00s [130/192] Installing gpgverify-0:2.2-5. 100% | 0.0 B/s | 9.4 KiB | 00m00s [131/192] Installing jansson-0:2.14-5.f 100% | 88.2 MiB/s | 90.3 KiB | 00m00s [132/192] Installing libpkgconf-0:2.5.1 100% | 89.1 MiB/s | 91.3 KiB | 00m00s [133/192] Installing pkgconf-0:2.5.1-2. 100% | 5.8 MiB/s | 95.2 KiB | 00m00s [134/192] Installing pkgconf-pkg-config 100% | 118.2 KiB/s | 1.8 KiB | 00m00s [135/192] Installing systemd-standalone 100% | 56.4 MiB/s | 981.8 KiB | 00m00s [136/192] Installing rpm-libs-0:6.1.0-1 100% | 366.4 MiB/s | 1.1 MiB | 00m00s [137/192] Installing rpm-sign-libs-0:6. 100% | 0.0 B/s | 40.5 KiB | 00m00s [138/192] Installing rpm-build-libs-0:6 100% | 282.4 MiB/s | 289.2 KiB | 00m00s [139/192] Installing xxhash-libs-0:0.8. 100% | 93.1 MiB/s | 95.4 KiB | 00m00s [140/192] Installing libbrotli-0:1.2.0- 100% | 282.3 MiB/s | 867.3 KiB | 00m00s [141/192] Installing libnghttp2-0:1.69. 100% | 163.3 MiB/s | 167.3 KiB | 00m00s [142/192] Installing libnghttp3-0:1.18. 100% | 161.0 MiB/s | 164.8 KiB | 00m00s [143/192] Installing keyutils-libs-0:1. 100% | 0.0 B/s | 55.6 KiB | 00m00s [144/192] Installing libcom_err-0:1.47. 100% | 0.0 B/s | 64.1 KiB | 00m00s [145/192] Installing libverto-0:0.3.2-1 100% | 0.0 B/s | 27.1 KiB | 00m00s [146/192] Installing krb5-libs-0:1.22.2 100% | 341.0 MiB/s | 2.4 MiB | 00m00s [147/192] Installing libcbor-0:0.14.0-3 100% | 0.0 B/s | 84.9 KiB | 00m00s [148/192] Installing libfido2-0:1.17.0- 100% | 252.0 MiB/s | 258.1 KiB | 00m00s [149/192] Installing libssh-0:0.12.2-1. 100% | 355.4 MiB/s | 727.8 KiB | 00m00s [150/192] Installing libcurl-0:8.23.0~r 100% | 359.3 MiB/s | 1.1 MiB | 00m00s [151/192] Installing elfutils-debuginfo 100% | 5.0 MiB/s | 82.2 KiB | 00m00s [152/192] Installing elfutils-0:0.196-1 100% | 144.4 MiB/s | 3.2 MiB | 00m00s [153/192] Installing binutils-0:2.47.50 100% | 335.4 MiB/s | 24.5 MiB | 00m00s [154/192] Installing gdb-minimal-0:17.2 100% | 295.1 MiB/s | 14.2 MiB | 00m00s [155/192] Installing debugedit-0:5.3-3. 100% | 13.7 MiB/s | 224.1 KiB | 00m00s [156/192] Installing curl-0:8.23.0~rc1- 100% | 19.9 MiB/s | 488.5 KiB | 00m00s [157/192] Installing rpm-0:6.1.0-1.fc46 100% | 78.2 MiB/s | 2.5 MiB | 00m00s [158/192] Installing cmake-srpm-macros- 100% | 0.0 B/s | 804.0 B | 00m00s [159/192] Installing efi-srpm-macros-0: 100% | 0.0 B/s | 41.3 KiB | 00m00s [160/192] Installing java-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [161/192] Installing lua-srpm-macros-0: 100% | 475.6 KiB/s | 1.9 KiB | 00m00s [162/192] Installing tree-sitter-srpm-m 100% | 0.0 B/s | 9.6 KiB | 00m00s [163/192] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [164/192] Installing filesystem-srpm-ma 100% | 0.0 B/s | 38.9 KiB | 00m00s [165/192] Installing rust-srpm-macros-0 100% | 0.0 B/s | 6.4 KiB | 00m00s [166/192] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 748.0 B | 00m00s [167/192] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [168/192] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [169/192] Installing package-notes-srpm 100% | 0.0 B/s | 2.1 KiB | 00m00s [170/192] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [171/192] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.1 KiB | 00m00s [172/192] Installing meson-srpm-macros- 100% | 0.0 B/s | 1.9 KiB | 00m00s [173/192] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [174/192] Installing gnome-srpm-macros- 100% | 0.0 B/s | 4.1 KiB | 00m00s [175/192] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [176/192] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [177/192] Installing gap-srpm-macros-0: 100% | 0.0 B/s | 2.7 KiB | 00m00s [178/192] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [179/192] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [180/192] Installing redhat-rpm-config- 100% | 185.9 MiB/s | 190.4 KiB | 00m00s [181/192] Installing forge-srpm-macros- 100% | 0.0 B/s | 40.3 KiB | 00m00s [182/192] Installing rpm-build-0:6.1.0- 100% | 17.5 MiB/s | 322.1 KiB | 00m00s [183/192] Installing erlang-srpm-macros 100% | 0.0 B/s | 2.5 KiB | 00m00s [184/192] Installing pyproject-srpm-mac 100% | 0.0 B/s | 4.0 KiB | 00m00s [185/192] Installing fonts-srpm-macros- 100% | 0.0 B/s | 57.0 KiB | 00m00s [186/192] Installing go-srpm-macros-0:3 100% | 0.0 B/s | 63.0 KiB | 00m00s [187/192] Installing R-srpm-macros-0:1. 100% | 0.0 B/s | 4.4 KiB | 00m00s [188/192] Installing python-srpm-macros 100% | 0.0 B/s | 52.9 KiB | 00m00s [189/192] Installing rpm-plugin-selinux 100% | 0.0 B/s | 12.9 KiB | 00m00s [190/192] Installing which-0:2.25-2.fc4 100% | 4.9 MiB/s | 85.8 KiB | 00m00s [191/192] Installing shadow-utils-2:4.2 100% | 131.5 MiB/s | 3.9 MiB | 00m00s [192/192] Installing info-0:7.3-3.fc45. 100% | 57.3 KiB/s | 372.8 KiB | 00m07s Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: R-srpm-macros-1.3.7-3.fc45.noarch add-determinism-0.7.3-3.fc45.x86_64 alternatives-1.33-6.fc45.x86_64 ansible-srpm-macros-1-22.fc45.noarch audit-libs-4.2.1-2.fc45.x86_64 bash-5.3.15-2.fc45.x86_64 binutils-2.47.50-11.fc46.x86_64 build-reproducibility-srpm-macros-0.7.3-3.fc45.noarch bzip2-1.0.8-24.fc45.x86_64 bzip2-libs-1.0.8-24.fc45.x86_64 ca-certificates-2026.2.90_v9.0.317-1.fc46.noarch cmake-srpm-macros-4.3.0-5.fc45.noarch coreutils-9.12-1.fc46.x86_64 coreutils-common-9.12-1.fc46.x86_64 cpio-2.15-10.fc45.x86_64 crypto-policies-20260713-2.gitc42da77.fc45.noarch curl-8.23.0~rc1-1.fc46.x86_64 cyrus-sasl-lib-2.1.28-37.fc45.x86_64 debugedit-5.3-3.fc45.x86_64 diffutils-3.12-6.fc45.x86_64 dwz-0.17-3.fc45.x86_64 ed-1.22.6-1.fc46.x86_64 efi-srpm-macros-6-9.fc45.noarch elfutils-0.196-1.fc46.x86_64 elfutils-debuginfod-client-0.196-1.fc46.x86_64 elfutils-libelf-0.196-1.fc46.x86_64 elfutils-libs-0.196-1.fc46.x86_64 erlang-srpm-macros-0.3.11-2.fc45.noarch fedora-gpg-keys-46-0.3.noarch fedora-release-46-0.1.noarch fedora-release-common-46-0.1.noarch fedora-release-identity-basic-46-0.1.noarch fedora-repos-46-0.3.noarch fedora-repos-rawhide-46-0.3.noarch file-5.48-3.fc46.x86_64 file-libs-5.48-3.fc46.x86_64 filesystem-3.18-59.fc45.x86_64 filesystem-srpm-macros-3.18-59.fc45.noarch findutils-4.11.0-2.fc45.x86_64 fips-provider-1.5.3-1.fc46.x86_64 fonts-srpm-macros-5.0.0-4.fc45.noarch forge-srpm-macros-0.4.0-5.fc45.noarch fpc-srpm-macros-1.3-17.fc45.noarch gap-srpm-macros-2-3.fc45.noarch gawk-5.4.1-1.fc45.x86_64 gdb-minimal-17.2-6.fc46.x86_64 gdbm-libs-1.23-12.fc45.x86_64 ghc-srpm-macros-1.10-2.fc45.noarch glibc-2.44.9000-2.fc46.x86_64 glibc-common-2.44.9000-2.fc46.x86_64 glibc-gconv-extra-2.44.9000-2.fc46.x86_64 glibc-minimal-langpack-2.44.9000-2.fc46.x86_64 gmp-6.3.0-6.fc45.x86_64 gnat-srpm-macros-7-3.fc45.noarch gnome-srpm-macros-1.0-2.fc45.noarch gnulib-l10n-20241231-4.fc45.noarch gnupg2-2.4.9-18.fc45.x86_64 gnupg2-dirmngr-2.4.9-18.fc45.x86_64 gnupg2-gpg-agent-2.4.9-18.fc45.x86_64 gnupg2-gpgconf-2.4.9-18.fc45.x86_64 gnupg2-keyboxd-2.4.9-18.fc45.x86_64 gnupg2-verify-2.4.9-18.fc45.x86_64 gnutls-3.8.13-5.fc46.x86_64 go-srpm-macros-3.8.0-3.fc45.noarch gpg-pubkey-4f50a6114cd5c6976a7f1179655a4b02f577861e-6888bc98 gpg-pubkey-b2e766fa50ca6fa2d5ed06fc09d879e09488fb64-6a6b46b4 gpg-pubkey-d924b10d3e810dabdd8b56b596e7e91491211fce-697c9899 gpgverify-2.2-5.fc45.noarch grep-3.12-4.fc45.x86_64 gzip-1.14-4.fc45.x86_64 ima-evm-utils-libs-1.6.2-12.fc45.x86_64 info-7.3-3.fc45.x86_64 jansson-2.14-5.fc45.x86_64 java-srpm-macros-1-9.fc45.noarch json-c-0.18-9.fc45.x86_64 kernel-srpm-macros-1.0-30.fc45.noarch keyutils-libs-1.6.3-8.fc45.x86_64 krb5-libs-1.22.2-9.fc45.x86_64 libacl-2.4.0-2.fc45.x86_64 libarchive-3.8.9-2.fc46.x86_64 libassuan-2.5.7-6.fc45.x86_64 libattr-2.6.0-2.fc45.x86_64 libblkid-2.42.4-2.fc46.x86_64 libbrotli-1.2.0-6.fc45.x86_64 libcap-2.78-2.fc45.x86_64 libcap-ng-0.9.6-1.fc46.x86_64 libcbor-0.14.0-3.fc45.x86_64 libcom_err-1.47.4-2.fc45.x86_64 libcurl-8.23.0~rc1-1.fc46.x86_64 libeconf-0.7.9-4.fc45.x86_64 libevent-2.1.13-1.fc46.x86_64 libfdisk-2.42.4-2.fc46.x86_64 libffi-3.8.0-1.fc46.x86_64 libfido2-1.17.0-5.fc45.x86_64 libfsverity-1.7-4.fc45.x86_64 libgcc-16.2.1-2.fc46.1.x86_64 libgcrypt-1.12.4-1.fc46.x86_64 libgomp-16.2.1-2.fc46.1.x86_64 libgpg-error-1.61-2.fc45.x86_64 libidn2-2.3.8-4.fc45.x86_64 libksba-1.8.1-1.fc46.x86_64 liblastlog2-2.42.4-2.fc46.x86_64 libmount-2.42.4-2.fc46.x86_64 libnghttp2-1.69.0-6.fc46.x86_64 libnghttp3-1.18.0-1.fc45.x86_64 libpfm-4.13.0-23.fc45.x86_64 libpkgconf-2.5.1-2.fc45.x86_64 libpsl-0.23.3-1.fc46.x86_64 libselinux-3.11-5.fc46.x86_64 libselinux-utils-3.11-5.fc46.x86_64 libsemanage-3.11-4.fc46.x86_64 libsepol-3.11-2.fc45.x86_64 libsmartcols-2.42.4-2.fc46.x86_64 libssh-0.12.2-1.fc45.x86_64 libssh-config-0.12.2-1.fc45.noarch libstdc++-16.2.1-2.fc46.1.x86_64 libtasn1-4.21.0-2.fc45.x86_64 libtool-ltdl-2.6.2-1.fc46.x86_64 libunistring-1.1-12.fc45.x86_64 libusb1-1.0.30-2.fc45.x86_64 libuuid-2.42.4-2.fc46.x86_64 libverto-0.3.2-13.fc45.x86_64 libxcrypt-4.5.2-4.fc45.x86_64 libxml2-2.15.4-1.fc46.x86_64 libzstd-1.5.7-6.fc45.x86_64 linkdupes-0.7.3-3.fc45.x86_64 lua-libs-5.5.1-2.fc46.x86_64 lua-srpm-macros-1-18.fc45.noarch lz4-libs-1.10.0-5.fc45.x86_64 meson-srpm-macros-1.12.1-1.fc46.noarch mpfr-4.2.2-4.fc45.x86_64 ncurses-base-6.6-3.fc45.noarch ncurses-libs-6.6-3.fc45.x86_64 nettle-4.0-5.fc45.x86_64 ngtcp2-1.22.1-3.fc45.x86_64 ngtcp2-crypto-ossl-1.22.1-3.fc45.x86_64 npth-1.8-5.fc45.x86_64 ocaml-srpm-macros-11-4.fc45.noarch openblas-srpm-macros-2-22.fc45.noarch openldap-2.6.14-1.fc46.x86_64 openssl-libs-4.0.2-3.fc46.x86_64 p11-kit-0.26.5-1.fc45.x86_64 p11-kit-trust-0.26.5-1.fc45.x86_64 package-notes-srpm-macros-0.20-2.fc45.noarch pam-libs-1.7.2-4.fc45.x86_64 patch-2.8-5.fc45.x86_64 pcre2-10.47-1.fc45.2.x86_64 pcre2-syntax-10.47-1.fc45.2.noarch perl-srpm-macros-1-65.fc45.noarch pkgconf-2.5.1-2.fc45.x86_64 pkgconf-m4-2.5.1-2.fc45.noarch pkgconf-pkg-config-2.5.1-2.fc45.x86_64 policycoreutils-3.11-2.fc45.x86_64 popt-1.19-11.fc45.x86_64 publicsuffix-list-dafsa-20260624-2.fc45.noarch pyproject-srpm-macros-1.23.2-1.fc45.noarch python-srpm-macros-3.15-2.fc45.noarch qt5-srpm-macros-5.15.18-3.fc45.noarch qt6-srpm-macros-6.11.2-1.fc46.noarch readline-8.3-6.fc45.x86_64 redhat-rpm-config-345-4.fc46.noarch redhat-systemd-presets-102-3.fc45.noarch redhat-systemd-presets-common-102-3.fc45.noarch rpm-6.1.0-1.fc46.x86_64 rpm-build-6.1.0-1.fc46.x86_64 rpm-build-libs-6.1.0-1.fc46.x86_64 rpm-libs-6.1.0-1.fc46.x86_64 rpm-plugin-selinux-6.1.0-1.fc46.x86_64 rpm-sequoia-1.10.3-1.fc46.x86_64 rpm-sign-libs-6.1.0-1.fc46.x86_64 rust-srpm-macros-28.5-2.fc45.noarch sed-4.10-2.fc45.x86_64 selinux-policy-45.19-1.fc46.noarch selinux-policy-targeted-45.19-1.fc46.noarch setup-2.15.1-2.fc45.noarch shadow-utils-4.20.0-1.fc45.x86_64 sqlite-libs-3.53.4-1.fc45.x86_64 systemd-libs-262-1.fc46.x86_64 systemd-standalone-sysusers-262-1.fc46.x86_64 tar-1.35-9.fc45.x86_64 tpm2-tss-4.2.0-1.fc45.x86_64 tree-sitter-srpm-macros-0.4.6-2.fc45.noarch unzip-6.0-71.fc45.x86_64 util-linux-2.42.4-2.fc46.x86_64 util-linux-core-2.42.4-2.fc46.x86_64 which-2.25-2.fc45.x86_64 xxhash-libs-0.8.4-1.fc46.x86_64 xz-5.8.4-1.fc46.x86_64 xz-libs-5.8.4-1.fc46.x86_64 zig-srpm-macros-1-9.fc45.noarch zip-3.0-46.fc45.x86_64 zlib-ng-compat-2.3.3-6.fc45.x86_64 zstd-1.5.7-6.fc45.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1790208000 Wrote: /builddir/build/SRPMS/conglomerate-1.6.80-1.20120308git166303d.fc46.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1790274095.888052/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-ys__2_eq/conglomerate/conglomerate.spec) Config(child) 0 minutes 22 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/conglomerate-1.6.80-1.20120308git166303d.fc46.src.rpm) Config(fedora-rawhide-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1790274095.888052/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1790274095.888052/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1790274095.888052/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-6.1.0-1.fc46.x86_64 rpm-sequoia-1.10.3-1.fc46.x86_64 dnf5-5.4.5.0-1.fc46.x86_64 dnf5-plugins-5.4.5.0-1.fc46.x86_64 Finish: chroot init Start: build phase for conglomerate-1.6.80-1.20120308git166303d.fc46.src.rpm Start: build setup for conglomerate-1.6.80-1.20120308git166303d.fc46.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1790208000 Wrote: /builddir/build/SRPMS/conglomerate-1.6.80-1.20120308git166303d.fc46.src.rpm Updating and loading repositories: fedora 100% | 390.8 KiB/s | 21.1 KiB | 00m00s Copr repository 100% | 170.1 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: autoconf noarch 0:2.73-4.fc45 fedora 2.9 MiB automake noarch 0:1.18.1-5.fc45 fedora 1.8 MiB bicpl-devel x86_64 0:2.0.0-2.20260106git8be98a9.fc46 copr_base 196.8 KiB gcc x86_64 0:16.2.1-2.fc46.1 fedora 121.8 MiB gcc-c++ x86_64 0:16.2.1-2.fc46.1 fedora 46.8 MiB libminc-devel x86_64 0:2.5.0-1.fc45 fedora 367.6 KiB libtool x86_64 0:2.6.2-1.fc46 fedora 2.8 MiB make x86_64 1:4.4.1-13.fc45 fedora 1.8 MiB netcdf-devel x86_64 0:4.10.1-4.fc46 fedora 427.9 KiB perl-Getopt-Tabular noarch 0:0.3-41.fc45 fedora 86.8 KiB perl-MNI noarch 0:0.08-1.20110321git075ae53.fc46 copr_base 439.3 KiB perl-interpreter x86_64 4:5.44.0-527.fc45 fedora 119.8 KiB zlib-ng-compat-devel x86_64 0:2.3.3-6.fc45 fedora 107.0 KiB Installing dependencies: ImageMagick x86_64 1:7.1.2.31-1.fc46 fedora 88.1 KiB ImageMagick-libs x86_64 1:7.1.2.31-1.fc46 fedora 9.1 MiB LibRaw x86_64 0:0.22.2-1.fc45 fedora 2.6 MiB abattis-cantarell-vf-fonts noarch 0:0.301-18.fc45 fedora 192.7 KiB adobe-mappings-cmap noarch 0:20231115-6.fc45 fedora 15.2 MiB adobe-mappings-cmap-deprecated noarch 0:20231115-6.fc45 fedora 582.1 KiB adobe-mappings-pdf noarch 0:20190401-13.fc45 fedora 4.4 MiB annobin-docs noarch 0:13.31-1.fc46 fedora 99.7 KiB annobin-plugin-gcc x86_64 0:13.31-1.fc46 fedora 716.3 KiB avahi-libs x86_64 0:0.9~rc2-9.fc45 fedora 171.3 KiB bicpl x86_64 0:2.0.0-2.20260106git8be98a9.fc46 copr_base 1.3 MiB blosc x86_64 0:1.21.6-12.fc45 fedora 126.1 KiB brotli x86_64 0:1.2.0-6.fc45 fedora 33.5 KiB brotli-devel x86_64 0:1.2.0-6.fc45 fedora 65.9 KiB bubblewrap x86_64 0:0.12.0-1.fc46 fedora 139.9 KiB cairo x86_64 0:1.18.4-9.fc45 fedora 1.8 MiB cairo-gobject x86_64 0:1.18.4-9.fc45 fedora 31.0 KiB cmake x86_64 0:4.3.0-5.fc45 fedora 40.4 MiB cmake-data noarch 0:4.3.0-5.fc45 fedora 9.4 MiB cmake-filesystem x86_64 0:4.3.0-5.fc45 fedora 0.0 B cmake-rpm-macros noarch 0:4.3.0-5.fc45 fedora 8.4 KiB cpp x86_64 0:16.2.1-2.fc46.1 fedora 42.6 MiB cups-filesystem noarch 1:2.4.19-4.fc45 fedora 0.0 B cups-libs x86_64 1:2.4.19-4.fc45 fedora 638.7 KiB dbus-libs x86_64 1:1.16.2-6.fc45 fedora 357.4 KiB default-fonts-core-sans noarch 0:4.3-3.fc45 fedora 11.9 KiB emacs-filesystem x86_64 1:30.2-3.fc45 fedora 0.0 B expat x86_64 0:2.8.3-1.fc46 fedora 338.4 KiB fftw-libs-double x86_64 0:3.3.10-18.fc45 fedora 3.4 MiB fontconfig x86_64 0:2.18.3-2.fc46 fedora 1.0 MiB fonts-filesystem noarch 1:5.0.0-4.fc45 fedora 0.0 B freetype x86_64 0:2.14.3-2.fc45 fedora 918.3 KiB fribidi x86_64 0:1.0.16-5.fc45 fedora 190.0 KiB gcc-gfortran x86_64 0:16.2.1-2.fc46.1 fedora 45.2 MiB gcc-plugin-annobin x86_64 0:16.2.1-2.fc46.1 fedora 57.1 KiB gdk-pixbuf2 x86_64 0:2.44.8-3.fc46 fedora 2.6 MiB gettext x86_64 0:1.0-4.fc46 fedora 17.8 MiB gettext-common-devel noarch 0:1.0-4.fc46 fedora 596.2 KiB gettext-devel x86_64 0:1.0-4.fc46 fedora 1.4 MiB gettext-envsubst x86_64 0:1.0-4.fc46 fedora 70.6 KiB gettext-libs x86_64 0:1.0-4.fc46 fedora 2.3 MiB gettext-runtime x86_64 0:1.0-4.fc46 fedora 716.1 KiB glib2 x86_64 0:2.90.0-1.fc46 fedora 15.3 MiB glibc-devel x86_64 0:2.44.9000-2.fc46 fedora 2.3 MiB glycin-libs x86_64 0:2.2.1-1.fc46 fedora 4.7 MiB glycin-loaders x86_64 0:2.2.1-1.fc46 fedora 14.7 MiB google-droid-sans-fonts noarch 0:20200215-25.fc45 fedora 6.3 MiB google-noto-fonts-common noarch 0:20260901-4.fc46 fedora 17.7 KiB google-noto-sans-vf-fonts noarch 0:20260901-4.fc46 fedora 1.4 MiB graphite2 x86_64 0:1.3.14-22.fc45 fedora 191.4 KiB graphviz-libs x86_64 0:16.1.0-2.fc46 fedora 1.3 MiB groff-base x86_64 0:1.24.1-2.fc45 fedora 4.2 MiB harfbuzz x86_64 0:14.5.0-1.fc46 fedora 3.0 MiB hdf-libs x86_64 0:4.3.0-7.fc45 fedora 710.9 KiB hdf5 x86_64 0:2.1.1-5.fc45 fedora 7.4 MiB hdf5-devel x86_64 0:2.1.1-5.fc45 fedora 3.5 MiB highway x86_64 0:1.3.0-3.fc45 fedora 5.6 MiB imath x86_64 0:3.1.12-9.fc45 fedora 379.6 KiB jbig2dec-libs x86_64 0:0.20-9.fc45 fedora 168.9 KiB jbigkit-libs x86_64 0:2.1-34.fc45 fedora 117.2 KiB jsoncpp x86_64 0:1.9.6-3.fc44 fedora 285.6 KiB kernel-headers x86_64 0:7.3.0-0.rc4.38.fc46 fedora 7.1 MiB keyutils-libs-devel x86_64 0:1.6.3-8.fc45 fedora 48.2 KiB krb5-devel x86_64 0:1.22.2-9.fc45 fedora 709.9 KiB lcms2 x86_64 0:2.16-8.fc45 fedora 445.8 KiB libICE x86_64 0:1.1.2-5.fc45 fedora 198.4 KiB libSM x86_64 0:1.2.5-5.fc45 fedora 100.9 KiB libX11 x86_64 0:1.8.13-2.fc45 fedora 1.3 MiB libX11-common noarch 0:1.8.13-2.fc45 fedora 1.1 MiB libXau x86_64 0:1.0.12-5.fc45 fedora 72.8 KiB libXext x86_64 0:1.3.6-6.fc45 fedora 89.9 KiB libXft x86_64 0:2.3.8-11.fc45 fedora 168.3 KiB libXrender x86_64 0:0.9.12-5.fc45 fedora 49.9 KiB libXt x86_64 0:1.3.1-5.fc45 fedora 437.7 KiB libaec x86_64 0:1.1.7-2.fc45 fedora 92.0 KiB libaec-devel x86_64 0:1.1.7-2.fc45 fedora 22.6 KiB libaom x86_64 0:3.13.3-3.fc45 fedora 5.1 MiB libatomic x86_64 0:16.2.1-2.fc46.1 fedora 45.6 KiB libcom_err-devel x86_64 0:1.47.4-2.fc45 fedora 16.7 KiB libcurl-devel x86_64 0:8.23.0~rc1-1.fc46 fedora 1.4 MiB libdatrie x86_64 0:0.2.14-3.fc45 fedora 57.7 KiB libdav1d x86_64 0:1.5.4-1.fc46 fedora 1.8 MiB libdb x86_64 0:5.3.28-68.fc45 fedora 1.9 MiB libdeflate x86_64 0:1.26-1.fc46 fedora 119.9 KiB libgfortran x86_64 0:16.2.1-2.fc46.1 fedora 3.4 MiB libgs x86_64 0:10.08.0-1.fc46 fedora 21.6 MiB libheif x86_64 0:1.23.5-3.fc46 fedora 2.4 MiB libidn2-devel x86_64 0:2.3.8-4.fc45 fedora 152.1 KiB libijs x86_64 0:0.35-27.fc45 fedora 57.4 KiB libjpeg-turbo x86_64 0:3.1.4.1-2.fc45 fedora 821.8 KiB libjxl x86_64 1:0.11.2-2.fc45 fedora 4.1 MiB libkadm5 x86_64 0:1.22.2-9.fc45 fedora 217.9 KiB liblerc x86_64 0:4.2.0-1.fc45 fedora 661.1 KiB liblqr-1 x86_64 0:0.4.2-30.fc45 fedora 101.0 KiB libminc x86_64 0:2.5.0-1.fc45 fedora 725.5 KiB libmpc x86_64 0:1.4.1-2.fc45 fedora 168.8 KiB libnghttp2-devel x86_64 0:1.69.0-6.fc46 fedora 288.0 KiB libnghttp3-devel x86_64 0:1.18.0-1.fc45 fedora 119.4 KiB libopenjph x86_64 0:0.31.0-1.fc46 fedora 510.4 KiB libpaper x86_64 1:2.1.1-11.fc45 fedora 48.6 KiB libpng x86_64 2:1.6.58-2.fc45 fedora 253.7 KiB libpsl-devel x86_64 0:0.23.3-1.fc46 fedora 111.5 KiB libquadmath x86_64 0:16.2.1-2.fc46.1 fedora 321.9 KiB libquadmath-devel x86_64 0:16.2.1-2.fc46.1 fedora 22.2 KiB libraqm x86_64 0:0.10.1-5.fc45 fedora 32.5 KiB librsvg2 x86_64 0:2.63.2-1.fc46 fedora 5.0 MiB libseccomp x86_64 0:2.6.1-3.fc45 fedora 222.2 KiB libselinux-devel x86_64 0:3.11-5.fc46 fedora 121.9 KiB libsepol-devel x86_64 0:3.11-2.fc45 fedora 120.7 KiB libssh-devel x86_64 0:0.12.2-1.fc45 fedora 204.2 KiB libstdc++-devel x86_64 0:16.2.1-2.fc46.1 fedora 41.2 MiB libtextstyle x86_64 0:1.0-4.fc46 fedora 211.4 KiB libthai x86_64 0:0.1.30-3.fc45 fedora 800.9 KiB libtiff x86_64 0:4.7.2-2.fc45 fedora 636.4 KiB libtirpc x86_64 0:1.3.8-0.fc46 fedora 208.2 KiB libultrahdr x86_64 0:1.4.0^20251202git8cbc983-2.fc45 fedora 388.9 KiB libuv x86_64 1:1.52.1-2.fc45 fedora 593.2 KiB libverto-devel x86_64 0:0.3.2-13.fc45 fedora 25.7 KiB libvmaf x86_64 0:3.2.1-1.fc46 fedora 1.2 MiB libwebp x86_64 0:1.6.0-4.fc45 fedora 968.1 KiB libwmf-lite x86_64 0:0.2.16-2.fc46 fedora 167.9 KiB libxcb x86_64 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pcre2-devel x86_64 0:10.47-1.fc45.2 fedora 2.1 MiB pcre2-utf16 x86_64 0:10.47-1.fc45.2 fedora 655.2 KiB pcre2-utf32 x86_64 0:10.47-1.fc45.2 fedora 619.1 KiB perl x86_64 4:5.44.0-527.fc45 fedora 0.0 B perl-Algorithm-Diff noarch 0:1.2010-16.fc45 fedora 107.5 KiB perl-Archive-Tar noarch 0:3.12-528.fc45 fedora 157.9 KiB perl-Archive-Zip noarch 0:1.68-19.fc45 fedora 291.1 KiB perl-Attribute-Handlers noarch 0:1.03-527.fc45 fedora 39.9 KiB perl-AutoLoader noarch 0:5.74-527.fc45 fedora 20.6 KiB perl-AutoSplit noarch 0:5.74-527.fc45 fedora 23.1 KiB perl-B x86_64 0:1.92-527.fc45 fedora 513.5 KiB perl-Benchmark noarch 0:1.27-527.fc45 fedora 36.4 KiB perl-CPAN noarch 0:2.41-1.fc46 fedora 3.5 MiB perl-CPAN-Meta noarch 0:2.150015-1.fc46 fedora 595.9 KiB perl-CPAN-Meta-Requirements noarch 0:2.145-4.fc45 fedora 82.8 KiB perl-CPAN-Meta-YAML noarch 0:0.020-528.fc45 fedora 52.1 KiB perl-Carp noarch 0:1.54-527.fc45 fedora 46.6 KiB perl-Class-Struct noarch 0:0.68-527.fc45 fedora 25.4 KiB 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50.9 KiB perl-FindBin noarch 0:1.54-527.fc45 fedora 6.8 KiB perl-GDBM_File x86_64 1:1.24-527.fc45 fedora 79.5 KiB perl-Getopt-Long noarch 1:2.58-527.fc45 fedora 144.5 KiB perl-Getopt-Std noarch 0:1.15-527.fc45 fedora 12.5 KiB perl-HTTP-Tiny noarch 0:0.096-528.fc45 fedora 162.4 KiB perl-Hash-Util x86_64 0:0.32-527.fc45 fedora 54.9 KiB perl-Hash-Util-FieldHash x86_64 0:1.27-527.fc45 fedora 62.5 KiB perl-I18N-Collate noarch 0:1.02-527.fc45 fedora 7.1 KiB perl-I18N-LangTags noarch 0:0.45-527.fc45 fedora 82.4 KiB perl-I18N-Langinfo x86_64 0:0.24-527.fc45 fedora 38.6 KiB perl-IO x86_64 0:1.56-527.fc45 fedora 147.3 KiB perl-IO-Compress noarch 0:2.224-1.fc46 fedora 1.0 MiB perl-IO-Compress-Lzma noarch 0:2.224-1.fc46 fedora 217.8 KiB perl-IO-Socket-IP noarch 0:0.44-527.fc45 fedora 100.5 KiB perl-IO-Socket-SSL noarch 0:2.099-2.fc45 fedora 726.9 KiB perl-IO-Zlib noarch 1:1.15-527.fc45 fedora 25.8 KiB perl-IPC-Cmd noarch 2:1.04-527.fc45 fedora 84.8 KiB perl-IPC-Open3 noarch 0:1.24-527.fc45 fedora 27.7 KiB perl-IPC-SysV x86_64 0:2.09-527.fc45 fedora 73.7 KiB perl-JSON-PP noarch 1:4.18-3.fc45 fedora 142.7 KiB perl-Locale-Maketext noarch 0:1.33-527.fc45 fedora 171.2 KiB perl-Locale-Maketext-Simple noarch 1:0.21-527.fc45 fedora 12.8 KiB perl-MIME-Base32 noarch 0:1.303-26.fc45 fedora 30.7 KiB perl-MIME-Base64 x86_64 0:3.16-527.fc45 fedora 41.9 KiB perl-MRO-Compat noarch 0:0.15-14.fc45 fedora 43.0 KiB perl-Math-BigInt noarch 1:2.0050.03-527.fc45 fedora 1.1 MiB perl-Math-BigInt-FastCalc x86_64 0:0.502.000-527.fc45 fedora 43.9 KiB perl-Math-Complex noarch 0:1.63-527.fc45 fedora 85.1 KiB perl-Memoize noarch 0:1.17-527.fc45 fedora 64.7 KiB perl-Module-Build noarch 2:0.42.34-11.fc45 fedora 654.2 KiB perl-Module-CoreList noarch 1:5.20260820-1.fc46 fedora 1.3 MiB perl-Module-CoreList-tools noarch 1:5.20260820-1.fc46 fedora 18.6 KiB perl-Module-Load noarch 1:0.36-527.fc45 fedora 14.9 KiB perl-Module-Load-Conditional noarch 0:0.74-527.fc45 fedora 28.7 KiB perl-Module-Loaded noarch 1:0.08-527.fc45 fedora 5.0 KiB perl-Module-Metadata noarch 0:1.000040-1.fc45 fedora 70.4 KiB perl-Module-Signature noarch 0:0.96-2.fc45 fedora 133.9 KiB perl-NDBM_File x86_64 0:1.18-527.fc45 fedora 28.3 KiB perl-NEXT noarch 0:0.69-527.fc45 fedora 23.6 KiB perl-Net noarch 0:1.04-527.fc45 fedora 22.4 KiB perl-Net-Ping noarch 0:2.77-527.fc45 fedora 135.2 KiB perl-Net-SSLeay x86_64 0:1.96-5.fc45 fedora 1.3 MiB perl-ODBM_File x86_64 0:1.20-527.fc45 fedora 28.4 KiB perl-Opcode x86_64 0:1.71-527.fc45 fedora 48.5 KiB perl-POSIX x86_64 0:2.26-527.fc45 fedora 229.3 KiB perl-Package-Generator noarch 0:1.106-36.fc45 fedora 29.9 KiB perl-Params-Check noarch 1:0.38-527.fc45 fedora 27.6 KiB perl-Params-SomeUtil x86_64 0:1.11-1.fc46 fedora 100.4 KiB perl-PathTools x86_64 0:3.95-527.fc45 fedora 180.0 KiB perl-Perl-OSType noarch 0:1.010-527.fc45 fedora 32.8 KiB perl-PerlIO-via-QuotedPrint noarch 0:0.10-527.fc45 fedora 30.3 KiB perl-Pod-Checker noarch 4:1.77-527.fc45 fedora 52.2 KiB perl-Pod-Escapes noarch 1:1.07-527.fc45 fedora 24.9 KiB perl-Pod-Functions noarch 0:1.14-527.fc45 fedora 14.4 KiB perl-Pod-Html noarch 0:1.36-527.fc45 fedora 42.3 KiB perl-Pod-Perldoc noarch 0:3.28.01-527.fc45 fedora 163.8 KiB perl-Pod-Simple noarch 1:3.48-527.fc45 fedora 565.2 KiB perl-Pod-Usage noarch 4:2.05-527.fc45 fedora 86.3 KiB perl-Safe noarch 0:2.47-527.fc45 fedora 30.7 KiB perl-Scalar-List-Utils x86_64 5:1.70-527.fc45 fedora 144.8 KiB perl-Search-Dict noarch 0:1.08-527.fc45 fedora 4.7 KiB perl-SelectSaver noarch 0:1.03-527.fc45 fedora 2.1 KiB perl-SelfLoader noarch 0:1.29-527.fc45 fedora 22.2 KiB perl-Socket x86_64 4:2.043-1.fc46 fedora 121.7 KiB perl-Software-License noarch 0:0.104007-4.fc45 fedora 500.8 KiB perl-Storable x86_64 1:3.41-527.fc45 fedora 234.9 KiB perl-Sub-Exporter noarch 0:0.992-1.fc46 fedora 194.6 KiB perl-Sub-Install noarch 0:0.929-10.fc45 fedora 35.9 KiB perl-Symbol noarch 0:1.09-527.fc45 fedora 6.8 KiB perl-Sys-Hostname x86_64 0:1.25-527.fc45 fedora 15.7 KiB perl-Sys-Syslog x86_64 0:0.36-528.fc45 fedora 94.5 KiB perl-Term-ANSIColor noarch 0:5.01-527.fc45 fedora 97.5 KiB perl-Term-Cap noarch 0:1.18-527.fc45 fedora 29.3 KiB perl-Term-Complete noarch 0:1.403-527.fc45 fedora 5.8 KiB perl-Term-ReadLine noarch 0:1.17-527.fc45 fedora 17.3 KiB perl-Term-Table noarch 0:0.028-527.fc45 fedora 78.4 KiB perl-Test noarch 0:1.31-527.fc45 fedora 37.0 KiB perl-Test-Harness noarch 1:3.52-528.fc45 fedora 560.9 KiB perl-Test-Simple noarch 3:1.302225-1.fc46 fedora 1.8 MiB perl-Text-Abbrev noarch 0:1.02-527.fc45 fedora 3.1 KiB perl-Text-Balanced noarch 0:2.07-527.fc45 fedora 111.2 KiB perl-Text-Diff noarch 0:1.46-1.fc46 fedora 81.1 KiB perl-Text-Glob noarch 0:0.11-28.fc45 fedora 8.4 KiB perl-Text-ParseWords noarch 0:3.31-527.fc45 fedora 13.6 KiB perl-Text-Tabs+Wrap noarch 0:2024.001-527.fc45 fedora 22.6 KiB perl-Text-Template noarch 0:1.61-10.fc45 fedora 112.4 KiB perl-Thread noarch 0:3.06-527.fc45 fedora 12.1 KiB perl-Thread-Queue noarch 0:3.14-527.fc45 fedora 28.9 KiB perl-Thread-Semaphore noarch 0:2.13-527.fc45 fedora 10.0 KiB perl-Tie noarch 0:4.6-527.fc45 fedora 32.1 KiB perl-Tie-File noarch 0:1.10-527.fc45 fedora 85.6 KiB perl-Tie-Memoize noarch 0:1.1-527.fc45 fedora 6.2 KiB perl-Tie-RefHash noarch 0:1.41-527.fc45 fedora 35.9 KiB perl-Time noarch 0:1.04-527.fc45 fedora 9.8 KiB perl-Time-HiRes x86_64 4:1.9780-527.fc45 fedora 115.6 KiB perl-Time-Local noarch 2:1.350-527.fc45 fedora 69.0 KiB perl-Time-Piece x86_64 0:1.4100-527.fc45 fedora 88.7 KiB perl-URI noarch 0:5.37-1.fc46 fedora 275.5 KiB perl-Unicode-Collate x86_64 0:1.31-527.fc45 fedora 4.2 MiB perl-Unicode-Normalize x86_64 0:1.32-527.fc45 fedora 486.1 KiB perl-Unicode-UCD noarch 0:0.83-527.fc45 fedora 206.4 KiB perl-User-pwent noarch 0:1.05-527.fc45 fedora 17.1 KiB perl-autodie noarch 0:2.37-527.fc45 fedora 214.9 KiB perl-autouse noarch 0:1.11-527.fc45 fedora 5.9 KiB perl-base noarch 0:2.27-527.fc45 fedora 12.6 KiB perl-bignum noarch 0:0.67-528.fc45 fedora 133.2 KiB perl-blib noarch 0:1.07-527.fc45 fedora 3.2 KiB perl-constant noarch 0:1.33-528.fc45 fedora 26.3 KiB perl-debugger noarch 0:1.60-527.fc45 fedora 403.4 KiB perl-deprecate noarch 0:0.04-527.fc45 fedora 6.6 KiB perl-devel x86_64 4:5.44.0-527.fc45 fedora 4.1 MiB perl-diagnostics noarch 0:1.40-527.fc45 fedora 483.8 KiB perl-doc noarch 0:5.44.0-527.fc45 fedora 11.7 MiB perl-encoding x86_64 4:3.00-527.fc45 fedora 150.4 KiB perl-encoding-warnings noarch 0:0.14-527.fc45 fedora 10.1 KiB perl-experimental noarch 0:0.036-527.fc45 fedora 43.4 KiB perl-fields noarch 0:2.27-527.fc45 fedora 11.9 KiB perl-filetest noarch 0:1.03-527.fc45 fedora 6.4 KiB perl-if noarch 0:0.61.000-527.fc45 fedora 5.8 KiB perl-inc-latest noarch 2:0.500-33.fc45 fedora 34.6 KiB perl-less noarch 0:0.03-527.fc45 fedora 4.9 KiB perl-lib x86_64 0:0.65-527.fc45 fedora 8.5 KiB perl-libnet noarch 0:3.15-528.fc45 fedora 288.4 KiB perl-libnetcfg noarch 4:5.44.0-527.fc45 fedora 16.9 KiB perl-libs x86_64 4:5.44.0-527.fc45 fedora 12.0 MiB perl-local-lib noarch 0:2.000029-12.fc45 fedora 117.6 KiB perl-locale noarch 0:1.13-527.fc45 fedora 6.1 KiB perl-macros noarch 4:5.44.0-527.fc45 fedora 5.5 KiB perl-meta-notation noarch 0:5.44.0-527.fc45 fedora 2.0 KiB perl-mro x86_64 0:1.30-527.fc45 fedora 41.4 KiB perl-open noarch 0:1.13-527.fc45 fedora 11.3 KiB perl-overload noarch 0:1.40-527.fc45 fedora 71.6 KiB perl-overloading noarch 0:0.03-527.fc45 fedora 4.8 KiB perl-parent noarch 1:0.244-527.fc45 fedora 10.3 KiB perl-perlfaq noarch 0:5.20250619-527.fc45 fedora 733.5 KiB perl-ph x86_64 0:5.44.0-527.fc45 fedora 279.3 KiB perl-podlators noarch 1:6.1.1-1.fc46 fedora 327.2 KiB perl-sigtrap noarch 0:1.10-527.fc45 fedora 11.1 KiB perl-sort noarch 0:2.06-527.fc45 fedora 4.8 KiB perl-subs noarch 0:1.04-527.fc45 fedora 2.1 KiB perl-threads x86_64 1:2.45-527.fc45 fedora 110.8 KiB perl-threads-shared x86_64 0:1.73-527.fc45 fedora 79.5 KiB perl-utils noarch 0:5.44.0-527.fc45 fedora 97.0 KiB perl-vars noarch 0:1.05-527.fc45 fedora 3.9 KiB perl-version x86_64 9:0.99.34-527.fc45 fedora 132.7 KiB perl-vmsish noarch 0:1.04-527.fc45 fedora 6.6 KiB pixman x86_64 0:0.46.2-4.fc45 fedora 718.3 KiB publicsuffix-list noarch 0:20260624-2.fc45 fedora 345.9 KiB python-pip-wheel noarch 0:26.2.1-1.fc46 fedora 1.3 MiB python3 x86_64 0:3.15.0~rc2-1.fc46 fedora 28.7 KiB python3-libs x86_64 0:3.15.0~rc2-1.fc46 fedora 48.2 MiB python3-pyparsing noarch 0:3.1.2-19.fc46 fedora 1.0 MiB rav1e-libs x86_64 0:0.8.1-5.fc46 fedora 3.0 MiB rhash x86_64 0:1.4.5-5.fc45 fedora 354.8 KiB shared-mime-info x86_64 0:2.5.1-3.fc46 fedora 6.6 MiB snappy x86_64 0:1.2.2-6.fc45 fedora 79.9 KiB svt-av1-libs x86_64 0:3.1.2-3.fc45 fedora 5.6 MiB systemtap-sdt-devel x86_64 0:5.6~pre17846435g2da140e3-4.fc46 fedora 189.2 KiB systemtap-sdt-dtrace x86_64 0:5.6~pre17846435g2da140e3-4.fc46 fedora 185.8 KiB tzdata noarch 0:2026c-2.fc46 fedora 1.2 MiB urw-base35-bookman-fonts noarch 0:20200910-29.fc45 fedora 1.4 MiB urw-base35-c059-fonts noarch 0:20200910-29.fc45 fedora 1.4 MiB urw-base35-d050000l-fonts noarch 0:20200910-29.fc45 fedora 84.3 KiB urw-base35-fonts noarch 0:20200910-29.fc45 fedora 5.3 KiB urw-base35-fonts-common noarch 0:20200910-29.fc45 fedora 37.4 KiB urw-base35-gothic-fonts noarch 0:20200910-29.fc45 fedora 1.2 MiB urw-base35-nimbus-mono-ps-fonts noarch 0:20200910-29.fc45 fedora 1.0 MiB urw-base35-nimbus-roman-fonts noarch 0:20200910-29.fc45 fedora 1.4 MiB urw-base35-nimbus-sans-fonts noarch 0:20200910-29.fc45 fedora 2.4 MiB urw-base35-p052-fonts noarch 0:20200910-29.fc45 fedora 1.5 MiB urw-base35-standard-symbols-ps-fonts noarch 0:20200910-29.fc45 fedora 64.9 KiB urw-base35-z003-fonts noarch 0:20200910-29.fc45 fedora 390.8 KiB vim-filesystem noarch 2:9.2.1119-1.fc46 fedora 40.0 B xml-common noarch 0:0.6.3-70.fc46 fedora 78.4 KiB Transaction Summary: Installing: 399 packages Total size of inbound packages is 231 MiB. Need to download 231 MiB. After this operation, 736 MiB extra will be used (install 736 MiB, remove 0 B). [ 1/399] automake-0:1.18.1-5.fc45.noar 100% | 117.8 MiB/s | 723.9 KiB | 00m00s [ 2/399] autoconf-0:2.73-4.fc45.noarch 100% | 82.8 MiB/s | 848.1 KiB | 00m00s [ 3/399] libtool-0:2.6.2-1.fc46.x86_64 100% | 89.1 MiB/s | 638.4 KiB | 00m00s [ 4/399] make-1:4.4.1-13.fc45.x86_64 100% | 191.5 MiB/s | 588.3 KiB | 00m00s [ 5/399] perl-Getopt-Tabular-0:0.3-41. 100% | 11.3 MiB/s | 46.1 KiB | 00m00s [ 6/399] perl-interpreter-4:5.44.0-527 100% | 11.8 MiB/s | 72.7 KiB | 00m00s [ 7/399] perl-MNI-0:0.08-1.20110321git 100% | 17.8 MiB/s | 164.4 KiB | 00m00s [ 8/399] bicpl-devel-0:2.0.0-2.2026010 100% | 2.7 MiB/s | 38.5 KiB | 00m00s [ 9/399] libminc-devel-0:2.5.0-1.fc45. 100% | 19.9 MiB/s | 81.6 KiB | 00m00s [ 10/399] netcdf-devel-0:4.10.1-4.fc46. 100% | 36.6 MiB/s | 112.4 KiB | 00m00s [ 11/399] zlib-ng-compat-devel-0:2.3.3- 100% | 18.5 MiB/s | 37.8 KiB | 00m00s [ 12/399] emacs-filesystem-1:30.2-3.fc4 100% | 4.0 MiB/s | 8.1 KiB | 00m00s [ 13/399] m4-0:1.4.21-3.fc45.x86_64 100% | 84.8 MiB/s | 347.2 KiB | 00m00s [ 14/399] perl-Carp-0:1.54-527.fc45.noa 100% | 4.6 MiB/s | 28.6 KiB | 00m00s [ 15/399] perl-Class-Struct-0:0.68-527. 100% | 7.1 MiB/s | 21.8 KiB | 00m00s [ 16/399] perl-Data-Dumper-0:2.192-528. 100% | 13.8 MiB/s | 56.4 KiB | 00m00s [ 17/399] perl-Errno-0:1.39-527.fc45.x8 100% | 2.9 MiB/s | 14.6 KiB | 00m00s [ 18/399] perl-Exporter-0:5.79-527.fc45 100% | 6.0 MiB/s | 30.6 KiB | 00m00s [ 19/399] perl-File-Basename-0:2.86-527 100% | 4.1 MiB/s | 16.8 KiB | 00m00s [ 20/399] perl-File-Compare-0:1.100.800 100% | 2.5 MiB/s | 12.9 KiB | 00m00s [ 21/399] perl-File-Copy-0:2.43-527.fc4 100% | 4.8 MiB/s | 19.7 KiB | 00m00s [ 22/399] gcc-c++-0:16.2.1-2.fc46.1.x86 100% | 211.0 MiB/s | 17.3 MiB | 00m00s [ 23/399] perl-File-Find-0:1.44-527.fc4 100% | 1.5 MiB/s | 25.0 KiB | 00m00s [ 24/399] perl-File-Temp-1:0.231.200-52 100% | 14.5 MiB/s | 59.3 KiB | 00m00s [ 25/399] perl-File-stat-0:1.15-527.fc4 100% | 4.2 MiB/s | 17.2 KiB | 00m00s [ 26/399] perl-Getopt-Long-1:2.58-527.f 100% | 20.6 MiB/s | 63.2 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MiB/s | 14.6 MiB | 00m00s [ 40/399] perl-Sys-Hostname-0:1.25-527. 100% | 1.0 MiB/s | 16.7 KiB | 00m00s [ 41/399] minc-tools-0:2.3.2-7.20260106 100% | 21.0 MiB/s | 365.2 KiB | 00m00s [ 42/399] perl-libs-4:5.44.0-527.fc45.x 100% | 155.2 MiB/s | 2.6 MiB | 00m00s [ 43/399] bicpl-0:2.0.0-2.20260106git8b 100% | 22.4 MiB/s | 412.0 KiB | 00m00s [ 44/399] cmake-filesystem-0:4.3.0-5.fc 100% | 7.3 MiB/s | 14.9 KiB | 00m00s [ 45/399] libminc-0:2.5.0-1.fc45.x86_64 100% | 47.1 MiB/s | 289.1 KiB | 00m00s [ 46/399] nifticlib-devel-0:3.0.1-6.fc4 100% | 19.0 MiB/s | 58.3 KiB | 00m00s [ 47/399] hdf5-devel-0:2.1.1-5.fc45.x86 100% | 88.8 MiB/s | 1.5 MiB | 00m00s [ 48/399] libcurl-devel-0:8.23.0~rc1-1. 100% | 89.4 MiB/s | 1.0 MiB | 00m00s [ 49/399] perl-B-0:1.92-527.fc45.x86_64 100% | 19.7 MiB/s | 181.8 KiB | 00m00s [ 50/399] netcdf-0:4.10.1-4.fc46.x86_64 100% | 51.0 MiB/s | 887.2 KiB | 00m00s [ 51/399] perl-Scalar-List-Utils-5:1.70 100% | 7.3 MiB/s | 75.1 KiB | 00m00s [ 52/399] 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annobin-docs-0:13.31-1.fc46.n 100% | 28.3 MiB/s | 87.0 KiB | 00m00s [398/399] cmake-rpm-macros-0:4.3.0-5.fc 100% | 6.7 MiB/s | 13.7 KiB | 00m00s [399/399] ninja-build-0:1.13.2-6.fc45.x 100% | 66.1 MiB/s | 203.1 KiB | 00m00s -------------------------------------------------------------------------------- [399/399] Total 100% | 136.3 MiB/s | 230.5 MiB | 00m02s Running transaction [ 1/401] Verify package files 100% | 499.0 B/s | 399.0 B | 00m01s [ 2/401] Prepare transaction 100% | 2.8 KiB/s | 399.0 B | 00m00s [ 3/401] Installing glib2-0:2.90.0-1.f 100% | 278.9 MiB/s | 15.3 MiB | 00m00s [ 4/401] Installing cmake-filesystem-0 100% | 4.6 MiB/s | 9.4 KiB | 00m00s [ 5/401] Installing libjpeg-turbo-0:3. 100% | 402.1 MiB/s | 823.6 KiB | 00m00s [ 6/401] Installing fonts-filesystem-1 100% | 0.0 B/s | 788.0 B | 00m00s [ 7/401] Installing urw-base35-fonts-c 100% | 0.0 B/s | 38.4 KiB | 00m00s [ 8/401] Installing libpng-2:1.6.58-2. 100% | 248.9 MiB/s | 254.9 KiB | 00m00s [ 9/401] Installing 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123.8 KiB | 00m00s [371/401] Installing perl-Text-Template 100% | 111.3 MiB/s | 114.0 KiB | 00m00s [372/401] Installing perl-MRO-Compat-0: 100% | 0.0 B/s | 44.9 KiB | 00m00s [373/401] Installing perl-Package-Gener 100% | 0.0 B/s | 31.5 KiB | 00m00s [374/401] Installing perl-Sub-Exporter- 100% | 196.9 MiB/s | 201.7 KiB | 00m00s [375/401] Installing perl-Data-Section- 100% | 43.0 MiB/s | 44.1 KiB | 00m00s [376/401] Installing perl-Software-Lice 100% | 250.6 MiB/s | 513.2 KiB | 00m00s [377/401] Installing perl-Module-Build- 100% | 36.0 MiB/s | 663.2 KiB | 00m00s [378/401] Installing perl-CPAN-0:2.41-1 100% | 144.5 MiB/s | 3.5 MiB | 00m00s [379/401] Installing perl-4:5.44.0-527. 100% | 0.0 B/s | 124.0 B | 00m00s [380/401] Installing snappy-0:1.2.2-6.f 100% | 79.6 MiB/s | 81.6 KiB | 00m00s [381/401] Installing blosc-0:1.21.6-12. 100% | 125.9 MiB/s | 128.9 KiB | 00m00s [382/401] Installing netcdf-0:4.10.1-4. 100% | 111.6 MiB/s | 2.6 MiB | 00m00s [383/401] Installing libminc-0:2.5.0-1. 100% | 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libtool-0:2.6.2-1. 100% | 141.9 MiB/s | 2.8 MiB | 00m00s [397/401] Installing bicpl-devel-0:2.0. 100% | 198.3 MiB/s | 203.0 KiB | 00m00s [398/401] Installing perl-MNI-0:0.08-1. 100% | 221.1 MiB/s | 452.8 KiB | 00m00s [399/401] Installing perl-Getopt-Tabula 100% | 86.0 MiB/s | 88.1 KiB | 00m00s [400/401] Installing annobin-plugin-gcc 100% | 58.4 MiB/s | 718.0 KiB | 00m00s [401/401] Installing gcc-plugin-annobin 100% | 132.5 KiB/s | 58.7 KiB | 00m00s Warning: skipped OpenPGP checks for 4 packages from repository: copr_base Complete! Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1790208000 Wrote: /builddir/build/SRPMS/conglomerate-1.6.80-1.20120308git166303d.fc46.src.rpm Updating and loading repositories: fedora 100% | 297.2 KiB/s | 21.1 KiB | 00m00s Copr repository 100% | 191.4 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package "autoconf-2.73-4.fc45.noarch" is already installed. Package "automake-1.18.1-5.fc45.noarch" is already installed. Package "bicpl-devel-2.0.0-2.20260106git8be98a9.fc46.x86_64" is already installed. Package "gcc-16.2.1-2.fc46.1.x86_64" is already installed. Package "gcc-c++-16.2.1-2.fc46.1.x86_64" is already installed. Package "libminc-devel-2.5.0-1.fc45.x86_64" is already installed. Package "libtool-2.6.2-1.fc46.x86_64" is already installed. Package "make-1:4.4.1-13.fc45.x86_64" is already installed. Package "netcdf-devel-4.10.1-4.fc46.x86_64" is already installed. Package "perl-Getopt-Tabular-0.3-41.fc45.noarch" is already installed. Package "perl-MNI-0.08-1.20110321git075ae53.fc46.noarch" is already installed. Package "perl-interpreter-4:5.44.0-527.fc45.x86_64" is already installed. Package "zlib-ng-compat-devel-2.3.3-6.fc45.x86_64" is already installed. Nothing to do. Finish: build setup for conglomerate-1.6.80-1.20120308git166303d.fc46.src.rpm Start: rpmbuild conglomerate-1.6.80-1.20120308git166303d.fc46.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1790208000 Executing(mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.v13GMG Creating(rpmbuild.env): /builddir/build/BUILD/conglomerate-1.6.80-build/rpmbuild.env RPM_SOURCE_DIR="/builddir/build/SOURCES" RPM_BUILD_DIR="/builddir/build/BUILD/conglomerate-1.6.80-build" RPM_OPT_FLAGS="-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer" RPM_LD_FLAGS="-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes " RPM_ARCH="x86_64" RPM_OS="linux" RPM_BUILD_NCPUS="4" RPM_SPECPARTS_DIR="/builddir/build/BUILD/conglomerate-1.6.80-build/SPECPARTS" export RPM_SOURCE_DIR RPM_BUILD_DIR RPM_OPT_FLAGS RPM_ARCH RPM_OS RPM_BUILD_NCPUS RPM_SPECPARTS_DIR RPM_LD_FLAGS RPM_DOC_DIR="/usr/share/doc" export RPM_DOC_DIR RPM_PACKAGE_NAME="conglomerate" RPM_PACKAGE_VERSION="1.6.80" RPM_PACKAGE_RELEASE="1.20120308git166303d.fc46" export RPM_PACKAGE_NAME RPM_PACKAGE_VERSION RPM_PACKAGE_RELEASE LANG=C.UTF-8 export LANG unset CDPATH DISPLAY ||: unset DEBUGINFOD_URLS ||: unset RPM_CONFIG_DIR ||: RPM_BUILD_ROOT="/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT" export RPM_BUILD_ROOT PKG_CONFIG_PATH="${PKG_CONFIG_PATH}:/usr/lib64/pkgconfig:/usr/share/pkgconfig" export PKG_CONFIG_PATH CONFIG_SITE=${CONFIG_SITE:-NONE} export CONFIG_SITE Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.f2PZWk + umask 022 + cd /builddir/build/BUILD/conglomerate-1.6.80-build + cd /builddir/build/BUILD/conglomerate-1.6.80-build + rm -rf conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b + /usr/bin/rpmuncompress -x /builddir/build/SOURCES/conglomerate-166303d.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + mkdir -p m4 + tar -xf /builddir/build/SOURCES/mni-acmacros.tar.gz --strip-components=1 -C m4 + test -f m4/smr_WITH_BUILD_PATH.m4 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.5oVloz + umask 022 + cd /builddir/build/BUILD/conglomerate-1.6.80-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b + sed -i 's/^dnl AC_PROG_CXX$/AC_PROG_CXX/' configure.ac + grep -q '^AC_PROG_CXX$' configure.ac + autoreconf -ifv -I m4 autoreconf: export WARNINGS= autoreconf: Entering directory '.' autoreconf: configure.ac: no obvious need to run autopoint autoreconf: running: aclocal -I m4 --force -I m4 autoreconf: configure.ac: tracing autoreconf: running: libtoolize --copy --force libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac, libtoolize: and rerunning libtoolize and aclocal. autoreconf: configure.ac: not using Intltool autoreconf: configure.ac: not using Gtkdoc autoreconf: configure.ac: no need to run autopoint (confirmed) autoreconf: running: aclocal -I m4 --force -I m4 autoreconf: running: /usr/bin/autoconf --include=m4 --force configure.ac:19: warning: The macro 'AC_PROG_LIBTOOL' is obsolete. configure.ac:19: You should run autoupdate. m4/libtool.m4:100: AC_PROG_LIBTOOL is expanded from... configure.ac:19: the top level configure.ac:21: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:21: You should run autoupdate. ./lib/autoconf/general.m4:2976: AC_TRY_LINK is expanded from... m4/mni_REQUIRE_LIB.m4:7: mni_REQUIRE_LIB is expanded from... m4/mni_REQUIRE_MNILIBS.m4:1: mni_REQUIRE_MINC is expanded from... m4/mni_REQUIRE_MNILIBS.m4:21: mni_REQUIRE_VOLUMEIO is expanded from... m4/mni_REQUIRE_MNILIBS.m4:39: mni_REQUIRE_BICPL is expanded from... configure.ac:21: the top level configure.ac:21: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:21: You should run autoupdate. ./lib/autoconf/general.m4:2976: AC_TRY_LINK is expanded from... m4/mni_REQUIRE_LIB.m4:7: mni_REQUIRE_LIB is expanded from... m4/mni_REQUIRE_MNILIBS.m4:21: mni_REQUIRE_VOLUMEIO is expanded from... m4/mni_REQUIRE_MNILIBS.m4:39: mni_REQUIRE_BICPL is expanded from... configure.ac:21: the top level configure.ac:21: warning: The macro 'AC_TRY_LINK' is obsolete. configure.ac:21: You should run autoupdate. ./lib/autoconf/general.m4:2976: AC_TRY_LINK is expanded from... m4/mni_REQUIRE_LIB.m4:7: mni_REQUIRE_LIB is expanded from... m4/mni_REQUIRE_MNILIBS.m4:39: mni_REQUIRE_BICPL is expanded from... configure.ac:21: the top level configure.ac:24: warning: AC_OUTPUT should be used without arguments. configure.ac:24: You should run autoupdate. autoreconf: running: /usr/bin/autoheader --include=m4 --force autoreconf: running: automake --add-missing --copy --force-missing configure.ac:14: installing './compile' configure.ac:19: installing './config.guess' configure.ac:19: installing './config.sub' configure.ac:5: installing './install-sh' configure.ac:5: installing './missing' Makefile.am: installing './INSTALL' Makefile.am: installing './depcomp' autoreconf: configure.ac: not running make: --make not given autoreconf: Leaving directory '.' + sed -i s/volume_io2/minc_io/g configure + grep -q minc_io configure + cp /builddir/build/SOURCES/mni-volume-io-compat.h compat_minc.h + mkdir -p compat/volume_io + cat ++ pwd ++ pwd + export 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS' ++ pwd ++ pwd + export 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + '[' '-flto=auto -ffat-lto-objectsx' '!=' x ']' ++ find . -type f -name configure -print + for file in $(find . -type f -name configure -print) + /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup '/lt_cv_sys_global_symbol_to_cdecl=/s#(".*"|'\''.*'\'')#"sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./configure + diff -u ./configure.backup ./configure --- ./configure.backup 2026-09-24 18:22:15.825120369 +0000 +++ ./configure 2026-09-24 18:22:15.863120406 +0000 @@ -7896,7 +7896,7 @@ # Transform an extracted symbol line into a proper C declaration. # Some systems (esp. on ia64) link data and code symbols differently, # so use this general approach. -lt_cv_sys_global_symbol_to_cdecl="$SED -n"\ +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'"\ $lt_cdecl_hook\ " -e 's/^T .* \([a-zA-Z_][a-zA-Z0-9_]*\)$/extern int \1();/p'"\ " -e 's/^$symcode$symcode* .* \([a-zA-Z_][a-zA-Z0-9_]*\)$/extern char \1;/p'" @@ -19575,7 +19575,7 @@ compiler='`$ECHO "$compiler" | $SED "$delay_single_quote_subst"`' GCC='`$ECHO "$GCC" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_pipe='`$ECHO "$lt_cv_sys_global_symbol_pipe" | $SED "$delay_single_quote_subst"`' -lt_cv_sys_global_symbol_to_cdecl='`$ECHO "$lt_cv_sys_global_symbol_to_cdecl" | $SED "$delay_single_quote_subst"`' +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'" lt_cv_sys_global_symbol_to_import='`$ECHO "$lt_cv_sys_global_symbol_to_import" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_to_c_name_address='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address_lib_prefix" | $SED "$delay_single_quote_subst"`' + '[' 1 = 1 ']' +++ dirname ./configure ++ find . -name config.guess -o -name config.sub + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./config.sub + '[' -f /usr/lib/rpm/redhat/config.sub ']' + /usr/bin/rm -f ./config.sub ++ basename ./config.sub + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./config.sub '/usr/lib/rpm/redhat/config.sub' -> './config.sub' + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./config.guess + '[' -f /usr/lib/rpm/redhat/config.guess ']' + /usr/bin/rm -f ./config.guess ++ basename ./config.guess + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./config.guess '/usr/lib/rpm/redhat/config.guess' -> './config.guess' + '[' 1 = 1 ']' + '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors' ']' ++ find . -name ltmain.sh + for i in $(find . -name ltmain.sh) + /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors"~' ./ltmain.sh ++ grep -q runstatedir=DIR ./configure ++ echo --runstatedir=/run + ./configure --build=x86_64-redhat-linux --host=x86_64-redhat-linux --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/bin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --runstatedir=/run --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --with-minc2 --with-build-path=/usr 'LIBS=-lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm' checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking whether UID '1000' is supported by ustar format... yes checking whether GID '135' is supported by ustar format... yes checking how to create a ustar tar archive... gnutar checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking for x86_64-redhat-linux-gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C23 features... unsupported checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking dependency style of g++... none checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for float.h... yes checking build system type... x86_64-redhat-linux-gnu checking host system type... x86_64-redhat-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-redhat-linux-gnu file names to x86_64-redhat-linux-gnu format... func_convert_file_noop checking how to convert x86_64-redhat-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for x86_64-redhat-linux-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for x86_64-redhat-linux-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-redhat-linux-ranlib... no checking for ranlib... ranlib checking for x86_64-redhat-linux-ar... no checking for ar... ar checking for archiver @FILE support... @ checking for x86_64-redhat-linux-strip... no checking for strip... strip checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for x86_64-redhat-linux-mt... no checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking which variant of shared library versioning to provide... (default) aix checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... yes checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for library m... yes checking for library netcdf... yes checking for library z... yes checking for library hdf5... yes checking for library minc2... yes checking for library minc_io... yes checking for library bicpl... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating epm-header config.status: creating nlfit_smr config.status: creating mritotal_suppress config.status: creating smooth_mask config.status: creating compute_icbm_vols config.status: creating multispectral_stx_registration config.status: creating sphere_resample_obj config.status: creating suppress_fat config.status: creating regional_thickness config.status: creating remap_to_lobes config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands + /usr/bin/make -O -j4 V=1 VERBOSE=1 /usr/bin/make all-am make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o autocrop_volume.o autocrop_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o add_labels.o add_labels.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o apply_sphere_transform.o apply_sphere_transform.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o minc_labels.o minc_labels.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o average_voxels.o average_voxels.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o box_filter_volume.o box_filter_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o blur_surface.o blur_surface.c blur_surface.c: In function ‘main’: blur_surface.c:123:17: warning: ‘smooth_values’ may be used uninitialized [-Wmaybe-uninitialized] 123 | if( output_real( file, smooth_values[p] ) != OK || | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ blur_surface.c:31:61: note: ‘smooth_values’ was declared here 31 | Real fwhm, distance_ratio, *values, value, *smooth_values; | ^~~~~~~~~~~~~ blur_surface.c:104:30: warning: ‘value’ may be used uninitialized [-Wmaybe-uninitialized] 104 | smooth_values[p] = value; | ~~~~~~~~~~~~~~~~~^~~~~~~ blur_surface.c:31:53: note: ‘value’ was declared here 31 | Real fwhm, distance_ratio, *values, value, *smooth_values; | ^~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o chamfer_volume.o chamfer_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o chop_tags.o chop_tags.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o box_filter_volume_nd.o box_filter_volume_nd.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o classify_sulcus.o classify_sulcus.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o clamp_volume.o clamp_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o clean_surface_labels.o clean_surface_labels.c clean_surface_labels.c: In function ‘main’: clean_surface_labels.c:59:12: warning: unused variable ‘fp’ [-Wunused-variable] 59 | FILE * fp; | ^~ clean_surface_labels.c: In function ‘get_surface_neighbours’: clean_surface_labels.c:311:3: warning: multi-line comment [-Wcomment] 311 | // /\ /\ | ^ clean_surface_labels.c: In function ‘read_scalar’: clean_surface_labels.c:369:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 369 | fscanf( fp, "%f", &val ); | ^~~~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o cluster_volume.o cluster_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o clip_tags.o clip_tags.c clip_tags.c: In function ‘main’: clip_tags.c:336:28: warning: ‘voxel_volume’ may be used uninitialized [-Wmaybe-uninitialized] 336 | volume += voxel_volume; | ~~~~~~~^~~~~~~~~~~~~~~ clip_tags.c:52:52: note: ‘voxel_volume’ was declared here 52 | Real min_dist, max_dist, dist, voxel_volume; | ^~~~~~~~~~~~ clip_tags.c:159:24: warning: ‘left_constant’ may be used uninitialized [-Wmaybe-uninitialized] 159 | plane_constants[0] = left_constant; | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ clip_tags.c:58:26: note: ‘left_constant’ was declared here 58 | Real left_constant, right_constant; | ^~~~~~~~~~~~~ clip_tags.c:161:24: warning: ‘right_constant’ may be used uninitialized [-Wmaybe-uninitialized] 161 | plane_constants[1] = right_constant; | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ clip_tags.c:58:41: note: ‘right_constant’ was declared here 58 | Real left_constant, right_constant; | ^~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o coalesce_lines.o coalesce_lines.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compare_left_right.o compare_left_right.c compare_left_right.c: In function ‘main’: compare_left_right.c:235:20: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 235 | if( i == 0 && j == 0 || t_stat[i][j] < min_t ) | ~~~~~~~^~~~~~~~~ compare_left_right.c:237:20: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 237 | if( i == 0 && j == 0 || t_stat[i][j] > max_t ) | ~~~~~~~^~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compare_lengths.o compare_lengths.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o composite_images.o composite_images.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compare_left_right_groups.o compare_left_right_groups.c compare_left_right_groups.c: In function ‘main’: compare_left_right_groups.c:177:20: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 177 | if( i == 0 && j == 0 || t < min_t ) | ~~~~~~~^~~~~~~~~ compare_left_right_groups.c:179:25: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 179 | else if( i == 0 && j == 0 || t > max_t ) | ~~~~~~~^~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o composite_minc_images.o composite_minc_images.c composite_minc_images.c: In function ‘main’: composite_minc_images.c:32:41: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 32 | !equal_strings( method, "add" ) && | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ 33 | !equal_strings( method, "composite" ) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o close_surface.o close_surface.c close_surface.c: In function ‘label_inside_convex_hull’: close_surface.c:336:34: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 336 | if( x == 0 && y == 0 && z == 0 || voxel[c] < limits[0][c] ) | ~~~~~~~~~~~~~~~~~^~~~~~~~~ close_surface.c:340:34: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 340 | if( x == 0 && y == 0 && z == 0 || voxel[c] > limits[1][c] ) | ~~~~~~~~~~~~~~~~~^~~~~~~~~ close_surface.c: In function ‘print_convex_boundaries’: close_surface.c:881:43: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 881 | n_voxels == prev_max && i > prev_pos) ) | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compute_bounding_view.o compute_bounding_view.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o concat_images.o concat_images.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o composite_volumes.o composite_volumes.c composite_volumes.c: In function ‘main’: composite_volumes.c:199:12: warning: ‘rgb_volume’ may be used uninitialized [-Wmaybe-uninitialized] 199 | (void) output_volume( output_filename, NC_UNSPECIFIED, FALSE, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | 0.0, 0.0, | ~~~~~~~~~ 201 | rgb_volume, "Composited\n", NULL ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ composite_volumes.c:17:32: note: ‘rgb_volume’ was declared here 17 | Volume volume, rgb_volume; | ^~~~~~~~~~ composite_volumes.c:68:9: warning: ‘coding_type’ may be used uninitialized [-Wmaybe-uninitialized] 68 | initialize_colour_coding( &colour_coding, coding_type, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | under_colour, over_colour, low, high ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ composite_volumes.c:32:26: note: ‘coding_type’ was declared here 32 | Colour_coding_types coding_type; | ^~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o count_thresholded_volume.o count_thresholded_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o contour_slice.o contour_slice.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o compute_resels.o compute_resels.c compute_resels.c: In function ‘main’: compute_resels.c:59:11: warning: ‘n_points’ may be used uninitialized [-Wmaybe-uninitialized] 59 | if( get_object_points( object_list[0], &points ) != n_points ) | ^ compute_resels.c:18:58: note: ‘n_points’ was declared here 18 | int i, n_objects, n_surfaces[2], group, n_points, s; | ^~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_2d_sheet.o create_2d_sheet.c In function ‘create_path_between_nodes’, inlined from ‘create_2d_coordinates’ at create_2d_sheet.c:162:17, inlined from ‘main’ at create_2d_sheet.c:34:5: create_2d_sheet.c:80:20: warning: ‘best_neigh’ may be used uninitialized [-Wmaybe-uninitialized] 80 | while( current != start_point ); | ~~~~~~~~^~~~~~~~~~~~~~ create_2d_sheet.c: In function ‘main’: create_2d_sheet.c:51:37: note: ‘best_neigh’ was declared here 51 | int n_path, *path, current, best_neigh, n, neigh; | ^~~~~~~~~~ In function ‘create_2d_coordinates’, inlined from ‘main’ at create_2d_sheet.c:34:5: create_2d_sheet.c:198:21: warning: ‘start_point’ may be used uninitialized [-Wmaybe-uninitialized] 198 | vertices_in_path[start_point] = TRUE; | ^ create_2d_sheet.c: In function ‘main’: create_2d_sheet.c:109:51: note: ‘start_point’ was declared here 109 | int current_point, n_points, start_point, vertex; | ^~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_box.o create_box.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_label_map.o create_label_map.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_four_volumes.o create_four_volumes.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o convex_hull.o convex_hull.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_2d_surface.o create_2d_surface.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' convex_hull.c: In function ‘get_convex_hull’: convex_hull.c:617:1: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 617 | if(dbg) printf( "EDGE ENTRY %d:%d for poly %d\n", poly_vertices[edge], | ^~ convex_hull.c:620:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 620 | ind = find_limit_plane( n_points, points, point_flags, | ^~~ convex_hull.c: In function ‘get_surface_neighbours’: convex_hull.c:908:3: warning: multi-line comment [-Wcomment] 908 | // /\ /\ | ^ create_2d_surface.c: In function ‘create_2d_coordinates’: create_2d_surface.c:284:32: warning: variable ‘dummy’ set but not used [-Wunused-but-set-variable=] 284 | Real x, y, z, dummy; | ^~~~~ In file included from /usr/include/volume_io.h:43, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : In function ‘create_path_between_poles’, inlined from ‘create_2d_coordinates’ at create_2d_surface.c:306:17, inlined from ‘main’ at create_2d_surface.c:37:5: create_2d_surface.c:100:9: warning: ‘best_neigh’ may be used uninitialized [-Wmaybe-uninitialized] 100 | ADD_ELEMENT_TO_ARRAY( path, n_path, current, DEFAULT_CHUNK_SIZE ); | ^~~~~~~~~~~~~~~~~~~~ create_2d_surface.c: In function ‘main’: create_2d_surface.c:73:37: note: ‘best_neigh’ was declared here 73 | int n_path, *path, current, best_neigh, n, neigh; | ^~~~~~~~~~ In function ‘create_2d_coordinates’, inlined from ‘main’ at create_2d_surface.c:37:5: create_2d_surface.c:407:35: warning: ‘best_hor’ may be used uninitialized [-Wmaybe-uninitialized] 407 | horizontal[point] = best_hor; | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~ create_2d_surface.c: In function ‘main’: create_2d_surface.c:281:58: note: ‘best_hor’ was declared here 281 | float *distances, neigh_dist, best_dist, best_hor; | ^~~~~~~~ make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o get_filenames.o get_filenames.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_mahalanobis.o create_mahalanobis.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_landmark_full_volume.o create_landmark_full_volume.c create_landmark_full_volume.c: In function ‘is_left_id’: create_landmark_full_volume.c:31:22: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 31 | return( id >= 10 && id <= 19 || id == 30 ); | ~~~~~~~~~^~~~~~~~~~~ create_landmark_full_volume.c: In function ‘is_right_id’: create_landmark_full_volume.c:40:22: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 40 | return( id >= 20 && id <= 29 || id == 40 ); | ~~~~~~~~~^~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_surface_interpolation_lsq.o create_surface_interpolation_lsq.c create_surface_interpolation_lsq.c: In function ‘create_surface_interpolation’: create_surface_interpolation_lsq.c:277:30: warning: variable ‘n_edges’ set but not used [-Wunused-but-set-variable=] 277 | int neigh, n_edges; | ^~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dilate_volume.o dilate_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o create_warping_points.o create_warping_points.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o diff_mahalanobis.o diff_mahalanobis.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' diff_mahalanobis.c: In function ‘min_function’: diff_mahalanobis.c:153:59: warning: variable ‘close’ set but not used [-Wunused-but-set-variable=] 153 | Real z1, z2, diff, deriv1[3], deriv2[3], close; | ^~~~~ make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dim_image.o dim_image.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_deformation_distances.o dump_deformation_distances.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_points_to_tag_file.o dump_points_to_tag_file.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' dump_points_to_tag_file.c: In function ‘main’: dump_points_to_tag_file.c:22:31: warning: format ‘%s’ expects a matching ‘char *’ argument [-Wformat=] 22 | print_error( "Usage: %s input1.obj [input2.obj] output.txt\n" ); | ~^ | | | char * make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dilate_volume_completely.o dilate_volume_completely.c dilate_volume_completely.c: In function ‘main’: dilate_volume_completely.c:104:62: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 104 | min_inside <= test_value && | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ 105 | test_value <= max_inside ) | ~~~~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_transform.o dump_transform.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_rms.o dump_rms.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o dump_uv.o dump_uv.c dump_uv.c: In function ‘main’: dump_uv.c:22:31: warning: format ‘%s’ expects a matching ‘char *’ argument [-Wformat=] 22 | print_error( "Usage: %s input.obj output.txt\n" ); | ~^ | | | char * make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o evaluate.o evaluate.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o fill_sulci.o fill_sulci.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o extract_tag_slice.o extract_tag_slice.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' extract_tag_slice.c: In function ‘main’: extract_tag_slice.c:114:30: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 114 | if( !min_present && value != 0.0 || | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o extract_largest_line.o extract_largest_line.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_image_bounding_box.o find_image_bounding_box.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_surface_distances.o find_surface_distances.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_buried_surface.o find_buried_surface.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o search_utils.o search_utils.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' search_utils.c: In function ‘contains_value’: search_utils.c:114:23: warning: ‘under_found’ may be used uninitialized [-Wmaybe-uninitialized] 114 | if( under_found ) | ^ search_utils.c:88:14: note: ‘under_found’ was declared here 88 | BOOLEAN under_found, over_found; | ^~~~~~~~~~~ search_utils.c:108:23: warning: ‘over_found’ may be used uninitialized [-Wmaybe-uninitialized] 108 | if( over_found ) | ^ search_utils.c:88:27: note: ‘over_found’ was declared here 88 | BOOLEAN under_found, over_found; | ^~~~~~~~~~ make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_peaks.o find_peaks.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' find_peaks.c: In function ‘check_for_peak’: find_peaks.c:753:10: warning: enumeration value ‘NEXTREMES’ not handled in switch [-Wswitch] 753 | switch (extreme) { | ^~~~~~ find_peaks.c:760:10: warning: enumeration value ‘NEXTREMES’ not handled in switch [-Wswitch] 760 | switch (extreme) { | ^~~~~~ find_peaks.c: At top level: find_peaks.c:58:13: warning: ‘rcsid’ defined but not used [-Wunused-variable] 58 | static char rcsid[]="$Header: /private-cvsroot/libraries/conglomerate/find_peaks.c,v 1.1 2004-04-22 13:15:01 bert Exp $"; | ^~~~~ make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o model_objects.o model_objects.c model_objects.c: In function ‘input_original_positions’: model_objects.c:281:7: warning: ‘n_points’ may be used uninitialized [-Wmaybe-uninitialized] 281 | if( n_points != n_deforming_points ) | ^ model_objects.c:244:37: note: ‘n_points’ was declared here 244 | int i, n_objects, n_points; | ^~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o deform_line.o deform_line.c deform_line.c: In function ‘one_iteration_lines’: deform_line.c:59:50: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 59 | lines->end_indices[0] != lines->n_points && | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ 60 | lines->end_indices[0] != lines->n_points+1 ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_in_direction.o find_in_direction.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' find_in_direction.c: In function ‘find_boundary_in_direction’: find_in_direction.c:431:27: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 431 | (isovalue && | ~~~~~~~~~^~ 432 | check_voxel_for_isovalue( lookup, volume, label_volume, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 | degrees_continuity, | ~~~~~~~~~~~~~~~~~~~ 434 | voxel_index0, | ~~~~~~~~~~~~~ 435 | origin0, direction0, | ~~~~~~~~~~~~~~~~~~~~ 436 | FALSE, | ~~~~~~ 437 | current_distance0, max_dist, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 | boundary_def->min_isovalue, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 | boundary_def->normal_direction, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 | found, &found_dist ) || | ~~~~~~~~~~~~~~~~~~~~ find_in_direction.c:513:27: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 513 | (isovalue && | ~~~~~~~~~^~ 514 | check_voxel_for_isovalue( lookup, volume, label_volume, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 | degrees_continuity, | ~~~~~~~~~~~~~~~~~~~ 516 | voxel_index1, | ~~~~~~~~~~~~~ 517 | origin1, direction1, | ~~~~~~~~~~~~~~~~~~~~ 518 | TRUE, | ~~~~~ 519 | current_distance1, max_dist, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 | boundary_def->min_isovalue, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 | boundary_def->normal_direction, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 | found, &found_dist ) || | ~~~~~~~~~~~~~~~~~~~~ find_in_direction.c: In function ‘check_voxel_for_isovalue’: find_in_direction.c:727:59: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 727 | if( normal_direction == TOWARDS_LOWER && dot_prod > 0.0 || | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o intersect_voxel.o intersect_voxel.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_tag_outliers.o find_tag_outliers.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_vertex.o find_vertex.c In file included from /usr/include/volume_io.h:44, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : find_vertex.c: In function ‘main’: find_vertex.c:50:27: warning: ‘ind’ may be used uninitialized [-Wmaybe-uninitialized] 50 | Point_z(points[ind]), best_dist ); | ^ find_vertex.c:12:34: note: ‘ind’ was declared here 12 | int i, n_objects, ind, n_points, best_poly, n_items; | ^~~ find_vertex.c:66:9: warning: ‘best_poly’ may be used uninitialized [-Wmaybe-uninitialized] 66 | print( "Closest polygon: %d\n", best_poly ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ find_vertex.c:12:49: note: ‘best_poly’ was declared here 12 | int i, n_objects, ind, n_points, best_poly, n_items; | ^~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o find_volume_centroid.o find_volume_centroid.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o models.o models.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o conjugate_min.o conjugate_min.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o conjugate_grad.o conjugate_grad.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o line_minimization.o line_minimization.c line_minimization.c: In function ‘minimize_along_line’: line_minimization.c:142:25: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 142 | if( f_next < f1 && t_next < t1 || | ~~~~~~~~~~~~^~~~~~~~~~~~~~ line_minimization.c:150:30: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 150 | else if( f_next < f1 && t_next >= t1 || | ~~~~~~~~~~~~^~~~~~~~~~~~~~~ line_minimization.c:158:30: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 158 | else if( f_next > f1 && t_next < t1 || | ~~~~~~~~~~~~^~~~~~~~~~~~~~ line_minimization.c:164:30: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 164 | else if( f_next > f1 && t_next >= t1 || | ~~~~~~~~~~~~^~~~~~~~~~~~~~~ line_minimization.c:102:7: warning: ‘t2’ may be used uninitialized [-Wmaybe-uninitialized] 102 | if( t2 < t0 ) | ^ line_minimization.c:38:30: note: ‘t2’ was declared here 38 | Real t0, t1, t2, f0, f1, f2, t_next, f_next, step, fsize; | ^~ line_minimization.c:117:39: warning: ‘f0’ may be used uninitialized [-Wmaybe-uninitialized] 117 | bottom = 2.0 * (t2*f0-t0*f2-t1*f0+t1*f2-t2*f1+t0*f1); | ~~^~~ line_minimization.c:38:34: note: ‘f0’ was declared here 38 | Real t0, t1, t2, f0, f1, f2, t_next, f_next, step, fsize; | ^~ line_minimization.c:117:45: warning: ‘f2’ may be used uninitialized [-Wmaybe-uninitialized] 117 | bottom = 2.0 * (t2*f0-t0*f2-t1*f0+t1*f2-t2*f1+t0*f1); | ~~^~~ line_minimization.c:38:42: note: ‘f2’ was declared here 38 | Real t0, t1, t2, f0, f1, f2, t_next, f_next, step, fsize; | ^~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o fit_curve.o fit_curve.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o fit_curve2.o fit_curve2.c fit_curve2.c: In function ‘fit_curve’: fit_curve2.c:783:72: warning: variable ‘fit’ set but not used [-Wunused-but-set-variable=] 783 | Real *parameters, range_tolerance, domain_tolerance, fit; | ^~~ fit_curve2.c: In function ‘get_closest_segment’: fit_curve2.c:606:11: warning: ‘best_seg’ may be used uninitialized [-Wmaybe-uninitialized] 606 | return( best_seg ); | ^ fit_curve2.c:590:16: note: ‘best_seg’ was declared here 590 | int seg, best_seg; | ^~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_polygons.o flatten_polygons.c flatten_polygons.c: In function ‘normalize_size’: flatten_polygons.c:59:14: warning: variable ‘offset’ set but not used [-Wunused-but-set-variable=] 59 | Vector offset, diff; | ^~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_sheet.o flatten_sheet.c In function ‘flatten_polygons’, inlined from ‘main’ at flatten_sheet.c:101:5: flatten_sheet.c:286:44: warning: ‘which’ may be used uninitialized [-Wmaybe-uninitialized] 286 | fixed_indices[i+1] = neighbours[which][i]; | ^ flatten_sheet.c: In function ‘main’: flatten_sheet.c:252:64: note: ‘which’ was declared here 252 | int i, p, point, *n_neighbours, **neighbours, which; | ^~~~~ flatten_sheet.c:259:22: warning: ‘x_dir.coords[0]’ may be used uninitialized [-Wmaybe-uninitialized] 259 | Vector x_dir, y_dir, offset, p12, p13; | ^~~~~ flatten_sheet.c:259:29: warning: ‘y_dir.coords[0]’ may be used uninitialized [-Wmaybe-uninitialized] 259 | Vector x_dir, y_dir, offset, p12, p13; | ^~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o fit_3d.o fit_3d.c fit_3d.c: In function ‘create_image_coefficients’: fit_3d.c:483:16: warning: variable ‘n_involved’ set but not used [-Wunused-but-set-variable=] 483 | int n_involved, inv_index, neigh_parm_index, n_vectors, v; | ^~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_sheet3.o flatten_sheet3.c flatten_sheet3.c: In function ‘create_coefficients’: flatten_sheet3.c:463:36: warning: format ‘%g’ expects a matching ‘double’ argument [-Wformat=] 463 | print_error( "Y = %g\n" ); | ~^ | | | double In file included from /usr/include/volume_io/arrays.h:32, from /usr/include/volume_io.h:43, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : In function ‘flatten_polygons’, inlined from ‘main’ at flatten_sheet3.c:140:5: flatten_sheet3.c:609:34: warning: ‘which’ may be used uninitialized [-Wmaybe-uninitialized] 609 | ALLOC( flat, n_neighbours[which] ); | ^ flatten_sheet3.c: In function ‘main’: flatten_sheet3.c:581:35: note: ‘which’ was declared here 581 | int i, p, point, which, n; | ^~~~~ flatten_sheet3.c:588:22: warning: ‘x_dir.coords[0]’ may be used uninitialized [-Wmaybe-uninitialized] 588 | Vector x_dir, y_dir, offset; | ^~~~~ flatten_sheet3.c:588:29: warning: ‘y_dir.coords[0]’ may be used uninitialized [-Wmaybe-uninitialized] 588 | Vector x_dir, y_dir, offset; | ^~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flip_tags.o flip_tags.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_to_sphere.o flatten_to_sphere.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flip_volume.o flip_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o f_prob.o f_prob.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o flatten_to_sphere2.o flatten_to_sphere2.c In function ‘flatten_polygons’, inlined from ‘main’ at flatten_to_sphere2.c:78:5: flatten_to_sphere2.c:788:38: warning: ‘radius’ may be used uninitialized [-Wmaybe-uninitialized] 788 | parameters[n_parameters-1] = (dtype) radius; | ^~~~~~~~~~~~~~ flatten_to_sphere2.c: In function ‘main’: flatten_to_sphere2.c:643:27: note: ‘radius’ was declared here 643 | Real len, radius, *weights[3][3], *x_flat, *y_flat, *z_flat; | ^~~~~~ In function ‘evaluate_fit_along_line’, inlined from ‘minimize_along_line’ at flatten_to_sphere2.c:566:5, inlined from ‘flatten_polygons’ at flatten_to_sphere2.c:833:9, inlined from ‘main’ at flatten_to_sphere2.c:78:5: flatten_to_sphere2.c:412:53: warning: ‘dr’ may be used uninitialized [-Wmaybe-uninitialized] 412 | l2 = dx1 * dx1 + dy1 * dy1 + dz1 * dz1 - dr * dr; | ~~~^~~~ flatten_to_sphere2.c: In function ‘main’: flatten_to_sphere2.c:367:24: note: ‘dr’ was declared here 367 | Real dx, dy, dz, dr, dist, radius, radius2; | ^~ In function ‘evaluate_fit_along_line’, inlined from ‘minimize_along_line’ at flatten_to_sphere2.c:566:5, inlined from ‘flatten_polygons’ at flatten_to_sphere2.c:833:9, inlined from ‘main’ at flatten_to_sphere2.c:78:5: flatten_to_sphere2.c:411:54: warning: ‘radius’ may be used uninitialized [-Wmaybe-uninitialized] 411 | l1 = x1 * dx1 + y1 * dy1 + z1 * dz1 - radius * dr; | ~~~~~~~^~~~ flatten_to_sphere2.c: In function ‘main’: flatten_to_sphere2.c:367:34: note: ‘radius’ was declared here 367 | Real dx, dy, dz, dr, dist, radius, radius2; | ^~~~~~ In function ‘evaluate_fit_along_line’, inlined from ‘minimize_along_line’ at flatten_to_sphere2.c:566:5, inlined from ‘flatten_polygons’ at flatten_to_sphere2.c:833:9, inlined from ‘main’ at flatten_to_sphere2.c:78:5: flatten_to_sphere2.c:410:12: warning: ‘radius2’ may be used uninitialized [-Wmaybe-uninitialized] 410 | l0 = x1 * x1 + y1 * y1 + z1 * z1 - radius2; | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ flatten_to_sphere2.c: In function ‘main’: flatten_to_sphere2.c:367:42: note: ‘radius2’ was declared here 367 | Real dx, dy, dz, dr, dist, radius, radius2; | ^~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o gaussian_blur_peaks.o gaussian_blur_peaks.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o get_tic.o get_tic.c get_tic.c: In function ‘main’: get_tic.c:56:37: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 55 | voxel_flag_string[0] != 'v' && voxel_flag_string[0] != 'w' && | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | voxel_flag_string[0] != 'V' && voxel_flag_string[0] != 'W' ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o histogram_volume.o histogram_volume.c histogram_volume.c: In function ‘main’: histogram_volume.c:227:30: warning: ‘min_pos’ may be used uninitialized [-Wmaybe-uninitialized] 227 | pos = min_pos + (max_pos - min_pos) * | ~~~~~~~~~^~~~~~~~~~ histogram_volume.c:30:48: note: ‘min_pos’ was declared here 30 | Real x_pos, y_height, pos, min_pos, max_pos; | ^~~~~~~ histogram_volume.c:227:30: warning: ‘max_pos’ may be used uninitialized [-Wmaybe-uninitialized] 227 | pos = min_pos + (max_pos - min_pos) * | ~~~~~~~~~^~~~~~~~~~ histogram_volume.c:30:57: note: ‘max_pos’ was declared here 30 | Real x_pos, y_height, pos, min_pos, max_pos; | ^~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o interpolate_tags.o interpolate_tags.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o intensity_statistics.o intensity_statistics.c intensity_statistics.c: In function ‘main’: intensity_statistics.c:209:9: warning: ‘label_volume’ may be used uninitialized [-Wmaybe-uninitialized] 209 | delete_volume( label_volume ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ intensity_statistics.c:28:34: note: ‘label_volume’ was declared here 28 | Volume volume, label_volume; | ^~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o group_diff.o group_diff.c group_diff.c: In function ‘main’: group_diff.c:101:11: warning: ‘n_points’ may be used uninitialized [-Wmaybe-uninitialized] 101 | if( get_object_points( object_list[0], &points ) != n_points ) | ^ group_diff.c:19:58: note: ‘n_points’ was declared here 19 | int i, n_objects, n_surfaces[2], group, n_points, s, p; | ^~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o lookup_labels.o lookup_labels.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_diff_volume.o make_diff_volume.c make_diff_volume.c: In function ‘main’: make_diff_volume.c:64:49: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 64 | in_one = (min1 > max1 || min1 <= value1 && value1 <= max1); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ make_diff_volume.c:65:49: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 65 | in_two = (min2 > max2 || min2 <= value2 && value2 <= max2); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o labels_to_rgb.o labels_to_rgb.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o label_sulci.o label_sulci.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_gradient_volume.o make_gradient_volume.c make_gradient_volume.c: In function ‘main’: make_gradient_volume.c:47:27: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 47 | if( deriv_number != 1 && deriv_number != 2 || order != 1 && order != 3 ) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_grid_lines.o make_grid_lines.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_slice.o make_slice.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_line_links.o make_line_links.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_geodesic_volume.o make_geodesic_volume.c make_geodesic_volume.c: In function ‘label_surface_voxels’: make_geodesic_volume.c:168:40: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 168 | if( dx == 0 && dy == 0 && dz == 0 || | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ make_geodesic_volume.c:173:40: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 173 | if( dx == 0 && dy == 0 && dz == 0 || | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ In function ‘find_nearest_voxel’, inlined from ‘main’ at make_geodesic_volume.c:122:5: make_geodesic_volume.c:247:49: warning: array subscript 3 is above array bounds of ‘int[3]’ [-Warray-bounds=] 247 | limits[face][d] = limits[1-face][d]; | ~~~~~~~~~~~~~~^~~ make_geodesic_volume.c: In function ‘main’: make_geodesic_volume.c:213:14: note: while referencing ‘limits’ 213 | int limits[2][N_DIMENSIONS]; | ^~~~~~ In function ‘find_nearest_voxel’, inlined from ‘main’ at make_geodesic_volume.c:122:5: make_geodesic_volume.c:247:29: warning: array subscript 3 is above array bounds of ‘int[3]’ [-Warray-bounds=] 247 | limits[face][d] = limits[1-face][d]; | ~~~~~~~~~~~~^~~ make_geodesic_volume.c: In function ‘main’: make_geodesic_volume.c:213:14: note: while referencing ‘limits’ 213 | int limits[2][N_DIMENSIONS]; | ^~~~~~ In function ‘compute_geodesic_volume’, inlined from ‘main’ at make_geodesic_volume.c:124:5: make_geodesic_volume.c:422:5: warning: ‘MEM[(int *)&origin]’ may be used uninitialized [-Wmaybe-uninitialized] 422 | set_volume_real_value( volume, origin[X], origin[Y], origin[Z], 0, 0, 0.0 ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make_geodesic_volume.c: In function ‘main’: make_geodesic_volume.c:49:30: note: ‘MEM[(int *)&origin]’ was declared here 49 | int dim, origin[N_DIMENSIONS]; | ^~~~~~ In function ‘compute_geodesic_volume’, inlined from ‘main’ at make_geodesic_volume.c:124:5: make_geodesic_volume.c:422:5: warning: ‘MEM[(int *)&origin + 4B]’ may be used uninitialized [-Wmaybe-uninitialized] 422 | set_volume_real_value( volume, origin[X], origin[Y], origin[Z], 0, 0, 0.0 ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make_geodesic_volume.c: In function ‘main’: make_geodesic_volume.c:49:30: note: ‘MEM[(int *)&origin + 4B]’ was declared here 49 | int dim, origin[N_DIMENSIONS]; | ^~~~~~ In function ‘compute_geodesic_volume’, inlined from ‘main’ at make_geodesic_volume.c:124:5: make_geodesic_volume.c:422:5: warning: ‘MEM[(int *)&origin + 8B]’ may be used uninitialized [-Wmaybe-uninitialized] 422 | set_volume_real_value( volume, origin[X], origin[Y], origin[Z], 0, 0, 0.0 ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make_geodesic_volume.c: In function ‘main’: make_geodesic_volume.c:49:30: note: ‘MEM[(int *)&origin + 8B]’ was declared here 49 | int dim, origin[N_DIMENSIONS]; | ^~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_sphere_transform.o make_sphere_transform.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o make_surface_bitlist.o make_surface_bitlist.c make_surface_bitlist.c: In function ‘label_surface_voxels’: make_surface_bitlist.c:161:44: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 161 | if( dx == 0 && dy == 0 && dz == 0 || | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ make_surface_bitlist.c:166:44: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 166 | if( dx == 0 && dy == 0 && dz == 0 || | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o map_surface_to_sheet.o map_surface_to_sheet.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o map_sheets.o map_sheets.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o mask_values.o mask_values.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o map_colours_to_sphere.o map_colours_to_sphere.c map_colours_to_sphere.c: In function ‘main’: map_colours_to_sphere.c:282:36: warning: ‘interp[0]’ may be used uninitialized [-Wmaybe-uninitialized] 282 | Real coefs[8], best_value, interp[4], value; | ^~~~~~ map_colours_to_sphere.c:282:36: warning: ‘interp[1]’ may be used uninitialized [-Wmaybe-uninitialized] In function ‘evaluate_volume_by_voting’, inlined from ‘map_colours_to_sphere_topology’ at map_colours_to_sphere.c:252:13, inlined from ‘main’ at map_colours_to_sphere.c:93:5: map_colours_to_sphere.c:375:23: warning: ‘interp[2]’ may be used uninitialized [-Wmaybe-uninitialized] 375 | values[2] = interp[2]; | ~~~~~~~~~~^~~~~~~~~~~ map_colours_to_sphere.c: In function ‘main’: map_colours_to_sphere.c:282:36: note: ‘interp[2]’ was declared here 282 | Real coefs[8], best_value, interp[4], value; | ^~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o mask_volume.o mask_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o match_tags.o match_tags.c match_tags.c:21:13: warning: ‘rcsid’ defined but not used [-Wunused-variable] 21 | static char rcsid[]="$Header: /private-cvsroot/libraries/conglomerate/match_tags.c,v 1.1 2004-04-07 15:53:20 bert Exp $"; | ^~~~~ match_tags.c: In function ‘main’: match_tags.c:165:26: warning: ‘near_tag’ may be used uninitialized [-Wmaybe-uninitialized] 165 | this_tag = tags2[near_tag]; | ^ match_tags.c:87:34: note: ‘near_tag’ was declared here 87 | int ipoint1, ipoint2, icoord, near_tag; | ^~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o marching_cubes.o marching_cubes.c marching_cubes.c: In function ‘get_point_index’: marching_cubes.c:447:20: warning: variable ‘point_class’ set but not used [-Wunused-but-set-variable=] 447 | Point_classes point_class; | ^~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o mincmask.o mincmask.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o minctotag.o minctotag.c minctotag.c: In function ‘main’: minctotag.c:83:37: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 83 | if( min_id > max_id && value != 0.0 || | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o minc_to_rgb.o minc_to_rgb.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o place_images.o place_images.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o normalize_pet.o normalize_pet.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o plane_polygon_intersect.o plane_polygon_intersect.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o preprocess_segmentation.o preprocess_segmentation.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_2d_coords.o print_2d_coords.c print_2d_coords.c: In function ‘main’: print_2d_coords.c:11:41: warning: variable ‘poly’ set but not used [-Wunused-but-set-variable=] 11 | int n_src_objects, poly; | ^~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' g++ -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -c -o mincdefrag.o mincdefrag.cc mincdefrag.cc: In function ‘int clean_color(int*, short int*, short int, short int, int)’: mincdefrag.cc:22:13: warning: unused variable ‘changed’ [-Wunused-variable] 22 | int changed, num_color, n_voxels; | ^~~~~~~ mincdefrag.cc:23:13: warning: unused variable ‘old_im1’ [-Wunused-variable] 23 | short * old_im1, * old_i, * old_ip1; | ^~~~~~~ mincdefrag.cc:23:24: warning: unused variable ‘old_i’ [-Wunused-variable] 23 | short * old_im1, * old_i, * old_ip1; | ^~~~~ mincdefrag.cc:23:33: warning: unused variable ‘old_ip1’ [-Wunused-variable] 23 | short * old_im1, * old_i, * old_ip1; | ^~~~~~~ mincdefrag.cc: In function ‘int extract_color(int*, short int, short int, int, VIO_Volume)’: mincdefrag.cc:159:12: warning: unused variable ‘i’ [-Wunused-variable] 159 | int i, j, k, ii; | ^ mincdefrag.cc:159:15: warning: unused variable ‘j’ [-Wunused-variable] 159 | int i, j, k, ii; | ^ mincdefrag.cc:159:18: warning: unused variable ‘k’ [-Wunused-variable] 159 | int i, j, k, ii; | ^ mincdefrag.cc:159:21: warning: unused variable ‘ii’ [-Wunused-variable] 159 | int i, j, k, ii; | ^~ mincdefrag.cc:165:11: warning: unused variable ‘nodes’ [-Wunused-variable] 165 | int * nodes = NULL; | ^~~~~ mincdefrag.cc:167:13: warning: unused variable ‘old_im1’ [-Wunused-variable] 167 | short * old_im1, * old_i, * old_ip1; | ^~~~~~~ mincdefrag.cc:167:24: warning: unused variable ‘old_i’ [-Wunused-variable] 167 | short * old_im1, * old_i, * old_ip1; | ^~~~~ mincdefrag.cc:167:33: warning: unused variable ‘old_ip1’ [-Wunused-variable] 167 | short * old_im1, * old_i, * old_ip1; | ^~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_all_labels.o print_all_labels.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_all_label_bounding_boxes.o print_all_label_bounding_boxes.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_axis_angles.o print_axis_angles.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_volume_value.o print_volume_value.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' g++ -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -c -o mincskel.o mincskel.cc mincskel.cc: In function ‘int skel(int*, VIO_Volume)’: mincskel.cc:175:12: warning: unused variable ‘i’ [-Wunused-variable] 175 | int i, j, k, ii; | ^ mincskel.cc:175:15: warning: unused variable ‘j’ [-Wunused-variable] 175 | int i, j, k, ii; | ^ mincskel.cc:175:18: warning: unused variable ‘k’ [-Wunused-variable] 175 | int i, j, k, ii; | ^ mincskel.cc:175:21: warning: unused variable ‘ii’ [-Wunused-variable] 175 | int i, j, k, ii; | ^~ mincskel.cc:181:11: warning: unused variable ‘nodes’ [-Wunused-variable] 181 | int * nodes = NULL; | ^~~~~ mincskel.cc:183:13: warning: unused variable ‘old_im1’ [-Wunused-variable] 183 | short * old_im1, * old_i, * old_ip1; | ^~~~~~~ mincskel.cc:183:24: warning: unused variable ‘old_i’ [-Wunused-variable] 183 | short * old_im1, * old_i, * old_ip1; | ^~~~~ mincskel.cc:183:33: warning: unused variable ‘old_ip1’ [-Wunused-variable] 183 | short * old_im1, * old_i, * old_ip1; | ^~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_world_value.o print_world_value.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o reparameterize_line.o reparameterize_line.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o print_world_values.o print_world_values.c print_world_values.c: In function ‘main’: print_world_values.c:120:42: warning: format ‘%[^ ’ expects argument of type ‘char *’, but argument 3 has type ‘char (*)[255]’ [-Wformat=] 120 | if(fscanf(glimfile, "%[^ \t] %*[^\n] %*1[\n]", &cur_minc) > 0) { | ~~~~^~ ~~~~~~~~~ | | | | char * char (*)[255] print_world_values.c:52:23: warning: unused variable ‘r’ [-Wunused-variable] 52 | int i, r, keep_looping, n_coords; | ^ In file included from /usr/include/stdio.h:974, from /usr/include/volume_io/basic.h:34, from /usr/include/volume_io.h:40, from /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h:27, from : In function ‘printf’, inlined from ‘main’ at print_world_values.c:137:5: /usr/include/bits/stdio2.h:118:10: warning: ‘voxx’ may be used uninitialized [-Wmaybe-uninitialized] 118 | return __printf_chk (__USE_FORTIFY_LEVEL - 1, __fmt, __va_arg_pack ()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ print_world_values.c: In function ‘main’: print_world_values.c:50:20: note: ‘voxx’ was declared here 50 | int voxx, voxy, voxz, sizes[MAX_DIMENSIONS]; | ^~~~ In function ‘printf’, inlined from ‘main’ at print_world_values.c:137:5: /usr/include/bits/stdio2.h:118:10: warning: ‘voxy’ may be used uninitialized [-Wmaybe-uninitialized] 118 | return __printf_chk (__USE_FORTIFY_LEVEL - 1, __fmt, __va_arg_pack ()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ print_world_values.c: In function ‘main’: print_world_values.c:50:26: note: ‘voxy’ was declared here 50 | int voxx, voxy, voxz, sizes[MAX_DIMENSIONS]; | ^~~~ In function ‘printf’, inlined from ‘main’ at print_world_values.c:137:5: /usr/include/bits/stdio2.h:118:10: warning: ‘voxz’ may be used uninitialized [-Wmaybe-uninitialized] 118 | return __printf_chk (__USE_FORTIFY_LEVEL - 1, __fmt, __va_arg_pack ()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ print_world_values.c: In function ‘main’: print_world_values.c:50:32: note: ‘voxz’ was declared here 50 | int voxx, voxy, voxz, sizes[MAX_DIMENSIONS]; | ^~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o random_warp.o random_warp.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o rgb_to_minc.o rgb_to_minc.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o scale_minc_image.o scale_minc_image.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o scan_object_to_volume.o scan_object_to_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o segment_probabilities.o segment_probabilities.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o stats_tag_file.o stats_tag_file.c stats_tag_file.c: In function ‘get_stats_for_one_file’: stats_tag_file.c:100:66: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 100 | (Real) Point_y(marker->position) >= y_min_range && | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ 101 | (Real) Point_y(marker->position) <= y_max_range ) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o spherical_resample.o spherical_resample.c spherical_resample.c: In function ‘main’: spherical_resample.c:134:48: warning: ‘in_values’ may be used uninitialized [-Wmaybe-uninitialized] 134 | value += weights[i] * in_values[surface->indices[ | ^ spherical_resample.c:16:40: note: ‘in_values’ was declared here 16 | Real dist, value, *in_values; | ^~~~~~~~~ spherical_resample.c:140:17: warning: ‘value’ may be used uninitialized [-Wmaybe-uninitialized] 140 | if( output_real( out_file, value ) != OK || | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spherical_resample.c:16:32: note: ‘value’ was declared here 16 | Real dist, value, *in_values; | ^~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o scan_lines_to_polygons.o scan_lines_to_polygons.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o subsample_volume.o subsample_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o surface_mask.o surface_mask.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o tag_volume.o tag_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o tagtominc.o tagtominc.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o trimesh_resample.o trimesh_resample.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o surface_mask2.o surface_mask2.c surface_mask2.c: In function ‘binary_object_mask’: surface_mask2.c:45:42: warning: variable ‘max_real_value’ set but not used [-Wunused-but-set-variable=] 45 | Real min_real_value, max_real_value; | ^~~~~~~~~~~~~~ surface_mask2.c:45:26: warning: variable ‘min_real_value’ set but not used [-Wunused-but-set-variable=] 45 | Real min_real_value, max_real_value; | ^~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o threshold_volume.o threshold_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o trimesh_set_points.o trimesh_set_points.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o trimesh_to_polygons.o trimesh_to_polygons.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o tags_to_spheres.o tags_to_spheres.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o transform_volume.o transform_volume.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o transform_tags.o transform_tags.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o transform_objects.o transform_objects.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o volume_object_evaluate.o volume_object_evaluate.c make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o two_surface_resample.o two_surface_resample.c two_surface_resample.c: In function ‘main’: two_surface_resample.c:140:48: warning: ‘in_values’ may be used uninitialized [-Wmaybe-uninitialized] 140 | value += weights[i] * in_values[surface->indices[ | ^ two_surface_resample.c:17:40: note: ‘in_values’ was declared here 17 | Real dist, value, *in_values; | ^~~~~~~~~ two_surface_resample.c:146:17: warning: ‘value’ may be used uninitialized [-Wmaybe-uninitialized] 146 | if( output_real( out_file, value ) != OK || | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ two_surface_resample.c:17:32: note: ‘value’ was declared here 17 | Real dist, value, *in_values; | ^~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' gcc -DHAVE_CONFIG_H -I. -I/usr/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -c -o tri_mesh.o tri_mesh.c tri_mesh.c: In function ‘coalesce_on_node_values’: tri_mesh.c:970:39: warning: suggest parentheses around ‘&&’ within ‘||’ [-Wparentheses] 970 | if( min_size_sq > 0.0 && size < min_size_sq || | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o autocrop_volume autocrop_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o autocrop_volume autocrop_volume.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o add_labels add_labels.o minc_labels.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o add_labels add_labels.o minc_labels.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o apply_sphere_transform apply_sphere_transform.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o apply_sphere_transform apply_sphere_transform.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o average_voxels average_voxels.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o average_voxels average_voxels.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o box_filter_volume box_filter_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o box_filter_volume box_filter_volume.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o blur_surface blur_surface.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o blur_surface blur_surface.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o box_filter_volume_nd box_filter_volume_nd.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o box_filter_volume_nd box_filter_volume_nd.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o chamfer_volume chamfer_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o chamfer_volume chamfer_volume.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o chop_tags chop_tags.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o chop_tags chop_tags.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o clamp_volume clamp_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o clamp_volume clamp_volume.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o classify_sulcus classify_sulcus.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o classify_sulcus classify_sulcus.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o clean_surface_labels clean_surface_labels.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o clean_surface_labels clean_surface_labels.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o cluster_volume cluster_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o cluster_volume cluster_volume.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o clip_tags clip_tags.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o clip_tags clip_tags.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o coalesce_lines coalesce_lines.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o coalesce_lines coalesce_lines.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o close_surface close_surface.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o close_surface close_surface.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o compare_left_right compare_left_right.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o compare_left_right compare_left_right.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o compare_left_right_groups compare_left_right_groups.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o compare_left_right_groups compare_left_right_groups.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o compare_lengths compare_lengths.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o compare_lengths compare_lengths.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o composite_images composite_images.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o composite_images composite_images.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o composite_minc_images composite_minc_images.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o composite_minc_images composite_minc_images.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o composite_volumes composite_volumes.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o composite_volumes composite_volumes.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o compute_bounding_view compute_bounding_view.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o compute_bounding_view compute_bounding_view.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o concat_images concat_images.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o concat_images concat_images.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o compute_resels compute_resels.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o compute_resels compute_resels.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o contour_slice contour_slice.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o contour_slice contour_slice.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o count_thresholded_volume count_thresholded_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o count_thresholded_volume count_thresholded_volume.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_2d_sheet create_2d_sheet.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_2d_sheet create_2d_sheet.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o convex_hull convex_hull.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o convex_hull convex_hull.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_box create_box.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_box create_box.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_2d_surface create_2d_surface.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_2d_surface create_2d_surface.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_label_map create_label_map.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_label_map create_label_map.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_four_volumes create_four_volumes.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_four_volumes create_four_volumes.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_landmark_full_volume create_landmark_full_volume.o get_filenames.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_landmark_full_volume create_landmark_full_volume.o get_filenames.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_mahalanobis create_mahalanobis.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_mahalanobis create_mahalanobis.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_surface_interpolation_lsq create_surface_interpolation_lsq.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_surface_interpolation_lsq create_surface_interpolation_lsq.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o create_warping_points create_warping_points.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o create_warping_points create_warping_points.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o diff_mahalanobis diff_mahalanobis.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o diff_mahalanobis diff_mahalanobis.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dilate_volume dilate_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dilate_volume dilate_volume.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dim_image dim_image.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dim_image dim_image.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dump_deformation_distances dump_deformation_distances.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dump_deformation_distances dump_deformation_distances.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dilate_volume_completely dilate_volume_completely.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dilate_volume_completely dilate_volume_completely.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dump_points_to_tag_file dump_points_to_tag_file.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dump_points_to_tag_file dump_points_to_tag_file.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dump_transform dump_transform.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dump_transform dump_transform.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dump_rms dump_rms.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dump_rms dump_rms.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o dump_uv dump_uv.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o dump_uv dump_uv.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o evaluate evaluate.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o evaluate evaluate.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o extract_tag_slice extract_tag_slice.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o extract_tag_slice extract_tag_slice.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o extract_largest_line extract_largest_line.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o extract_largest_line extract_largest_line.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o fill_sulci fill_sulci.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o fill_sulci fill_sulci.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o find_buried_surface find_buried_surface.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_buried_surface find_buried_surface.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o find_image_bounding_box find_image_bounding_box.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_image_bounding_box find_image_bounding_box.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o find_tag_outliers find_tag_outliers.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_tag_outliers find_tag_outliers.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o find_peaks find_peaks.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_peaks find_peaks.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o find_vertex find_vertex.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_vertex find_vertex.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o find_volume_centroid find_volume_centroid.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_volume_centroid find_volume_centroid.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o fit_curve fit_curve.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o fit_curve fit_curve.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o fit_curve2 fit_curve2.o conjugate_min.o conjugate_grad.o line_minimization.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o fit_curve2 fit_curve2.o conjugate_min.o conjugate_grad.o line_minimization.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o flatten_polygons flatten_polygons.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flatten_polygons flatten_polygons.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o find_surface_distances find_surface_distances.o search_utils.o find_in_direction.o model_objects.o intersect_voxel.o deform_line.o models.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o find_surface_distances find_surface_distances.o search_utils.o find_in_direction.o model_objects.o intersect_voxel.o deform_line.o models.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o flatten_sheet flatten_sheet.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flatten_sheet flatten_sheet.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o flatten_sheet3 flatten_sheet3.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flatten_sheet3 flatten_sheet3.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o flatten_to_sphere flatten_to_sphere.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flatten_to_sphere flatten_to_sphere.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o flip_tags flip_tags.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flip_tags flip_tags.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o flip_volume flip_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flip_volume flip_volume.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o flatten_to_sphere2 flatten_to_sphere2.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o flatten_to_sphere2 flatten_to_sphere2.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o f_prob f_prob.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o f_prob f_prob.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o gaussian_blur_peaks gaussian_blur_peaks.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o gaussian_blur_peaks gaussian_blur_peaks.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o fit_3d fit_3d.o find_in_direction.o model_objects.o intersect_voxel.o deform_line.o models.o search_utils.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o fit_3d fit_3d.o find_in_direction.o model_objects.o intersect_voxel.o deform_line.o models.o search_utils.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o get_tic get_tic.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o get_tic get_tic.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o group_diff group_diff.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o group_diff group_diff.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o histogram_volume histogram_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o histogram_volume histogram_volume.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o intensity_statistics intensity_statistics.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o intensity_statistics intensity_statistics.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o interpolate_tags interpolate_tags.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o interpolate_tags interpolate_tags.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o label_sulci label_sulci.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o label_sulci label_sulci.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o labels_to_rgb labels_to_rgb.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o labels_to_rgb labels_to_rgb.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o lookup_labels lookup_labels.o minc_labels.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o lookup_labels lookup_labels.o minc_labels.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_diff_volume make_diff_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_diff_volume make_diff_volume.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_gradient_volume make_gradient_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_gradient_volume make_gradient_volume.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_grid_lines make_grid_lines.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_grid_lines make_grid_lines.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_geodesic_volume make_geodesic_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_geodesic_volume make_geodesic_volume.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_line_links make_line_links.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_line_links make_line_links.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_slice make_slice.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_slice make_slice.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_surface_bitlist make_surface_bitlist.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_surface_bitlist make_surface_bitlist.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o make_sphere_transform make_sphere_transform.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o make_sphere_transform make_sphere_transform.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o map_surface_to_sheet map_surface_to_sheet.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o map_surface_to_sheet map_surface_to_sheet.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o map_colours_to_sphere map_colours_to_sphere.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o map_colours_to_sphere map_colours_to_sphere.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o map_sheets map_sheets.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o map_sheets map_sheets.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o mask_values mask_values.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o mask_values mask_values.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o mask_volume mask_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o mask_volume mask_volume.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o marching_cubes marching_cubes.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o marching_cubes marching_cubes.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o match_tags match_tags.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o match_tags match_tags.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o mincmask mincmask.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o mincmask mincmask.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o minctotag minctotag.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o minctotag minctotag.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CXX --mode=link g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o mincdefrag mincdefrag.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o mincdefrag mincdefrag.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CXX --mode=link g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o mincskel mincskel.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu++17 -fpermissive -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o mincskel mincskel.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o minc_to_rgb minc_to_rgb.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o minc_to_rgb minc_to_rgb.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o place_images place_images.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o place_images place_images.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o normalize_pet normalize_pet.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o normalize_pet normalize_pet.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o plane_polygon_intersect plane_polygon_intersect.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o plane_polygon_intersect plane_polygon_intersect.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o preprocess_segmentation preprocess_segmentation.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o preprocess_segmentation preprocess_segmentation.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o print_2d_coords print_2d_coords.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_2d_coords print_2d_coords.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o print_all_labels print_all_labels.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_all_labels print_all_labels.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o print_all_label_bounding_boxes print_all_label_bounding_boxes.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_all_label_bounding_boxes print_all_label_bounding_boxes.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o print_axis_angles print_axis_angles.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_axis_angles print_axis_angles.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o print_volume_value print_volume_value.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_volume_value print_volume_value.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o print_world_value print_world_value.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_world_value print_world_value.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o print_world_values print_world_values.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o print_world_values print_world_values.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o random_warp random_warp.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o random_warp random_warp.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o reparameterize_line reparameterize_line.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o reparameterize_line reparameterize_line.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o rgb_to_minc rgb_to_minc.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o rgb_to_minc rgb_to_minc.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o scale_minc_image scale_minc_image.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o scale_minc_image scale_minc_image.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o scan_object_to_volume scan_object_to_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o scan_object_to_volume scan_object_to_volume.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o scan_lines_to_polygons scan_lines_to_polygons.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o scan_lines_to_polygons scan_lines_to_polygons.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o segment_probabilities segment_probabilities.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o segment_probabilities segment_probabilities.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o spherical_resample spherical_resample.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o spherical_resample spherical_resample.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o stats_tag_file stats_tag_file.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o stats_tag_file stats_tag_file.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o subsample_volume subsample_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o subsample_volume subsample_volume.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o surface_mask surface_mask.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o surface_mask surface_mask.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o surface_mask2 surface_mask2.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o surface_mask2 surface_mask2.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o tag_volume tag_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o tag_volume tag_volume.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o tagtominc tagtominc.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o tagtominc tagtominc.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o threshold_volume threshold_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o threshold_volume threshold_volume.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o tags_to_spheres tags_to_spheres.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o tags_to_spheres tags_to_spheres.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o trimesh_to_polygons trimesh_to_polygons.o tri_mesh.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o trimesh_to_polygons trimesh_to_polygons.o tri_mesh.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o trimesh_set_points trimesh_set_points.o tri_mesh.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o trimesh_set_points trimesh_set_points.o tri_mesh.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o trimesh_resample trimesh_resample.o tri_mesh.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o trimesh_resample trimesh_resample.o tri_mesh.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o transform_volume transform_volume.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o transform_volume transform_volume.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o transform_tags transform_tags.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o transform_tags transform_tags.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o transform_objects transform_objects.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o transform_objects transform_objects.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o two_surface_resample two_surface_resample.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o two_surface_resample two_surface_resample.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /bin/sh ./libtool --tag=CC --mode=link gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -L/usr/lib -o volume_object_evaluate volume_object_evaluate.o -lbicpl -lminc_io -lminc2 -lhdf5 -lz -lnetcdf -lm -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm libtool: link: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=gnu17 -I/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat -I/usr/include/libminc -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=incompatible-pointer-types -Wno-error=int-conversion -include /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/compat_minc.h -DMNI_COMPAT_AXIS_MACROS -Wl,-z -Wl,relro -Wl,-z -Wl,pack-relative-relocs -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o volume_object_evaluate volume_object_evaluate.o -Wl,--as-needed -L/usr/lib -lbicpl -lminc_io -lminc2 -lnetcdf -lhdf5 -lz -lm make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.hEw6Mz + umask 022 + cd /builddir/build/BUILD/conglomerate-1.6.80-build + '[' /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT ++ dirname /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT + mkdir -p /builddir/build/BUILD/conglomerate-1.6.80-build + mkdir /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b + /usr/bin/make install DESTDIR=/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT 'INSTALL=/usr/bin/install -p' make[1]: Entering directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' /usr/bin/mkdir -p '/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin' /bin/sh ./libtool --mode=install /usr/bin/install -p add_labels apply_sphere_transform autocrop_volume average_voxels blur_surface box_filter_volume box_filter_volume_nd chamfer_volume chop_tags clamp_volume classify_sulcus clean_surface_labels clip_tags close_surface cluster_volume coalesce_lines compare_left_right compare_left_right_groups compare_lengths composite_images composite_minc_images composite_volumes compute_bounding_view compute_resels concat_images contour_slice convex_hull count_thresholded_volume create_2d_sheet create_2d_surface create_box create_four_volumes create_label_map create_landmark_full_volume create_mahalanobis create_surface_interpolation_lsq create_warping_points diff_mahalanobis dilate_volume dilate_volume_completely dim_image dump_deformation_distances dump_points_to_tag_file dump_rms dump_transform dump_uv evaluate extract_tag_slice extract_largest_line fill_sulci find_buried_surface find_image_bounding_box find_peaks find_surface_distances find_tag_outliers find_vertex find_volume_centroid fit_curve fit_curve2 fit_3d flatten_polygons flatten_sheet flatten_sheet3 flatten_to_sphere flatten_to_sphere2 flip_tags flip_volume f_prob gaussian_blur_peaks get_tic group_diff histogram_volume intensity_statistics interpolate_tags label_sulci labels_to_rgb lookup_labels make_diff_volume make_geodesic_volume make_gradient_volume make_grid_lines make_line_links make_slice make_surface_bitlist make_sphere_transform map_colours_to_sphere map_surface_to_sheet map_sheets marching_cubes mask_values mask_volume match_tags mincdefrag mincmask mincskel minctotag minc_to_rgb normalize_pet place_images plane_polygon_intersect preprocess_segmentation print_2d_coords print_all_labels print_all_label_bounding_boxes print_axis_angles print_volume_value print_world_value print_world_values random_warp reparameterize_line rgb_to_minc scale_minc_image scan_lines_to_polygons scan_object_to_volume segment_probabilities spherical_resample stats_tag_file subsample_volume surface_mask surface_mask2 tag_volume tagtominc threshold_volume trimesh_resample trimesh_set_points trimesh_to_polygons tags_to_spheres transform_volume transform_tags transform_objects two_surface_resample volume_object_evaluate '/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin' libtool: install: /usr/bin/install -p add_labels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/add_labels libtool: install: /usr/bin/install -p apply_sphere_transform /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/apply_sphere_transform libtool: install: /usr/bin/install -p autocrop_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/autocrop_volume libtool: install: /usr/bin/install -p average_voxels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/average_voxels libtool: install: /usr/bin/install -p blur_surface /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/blur_surface libtool: install: /usr/bin/install -p box_filter_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/box_filter_volume libtool: install: /usr/bin/install -p box_filter_volume_nd /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/box_filter_volume_nd libtool: install: /usr/bin/install -p chamfer_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/chamfer_volume libtool: install: /usr/bin/install -p chop_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/chop_tags libtool: install: /usr/bin/install -p clamp_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clamp_volume libtool: install: /usr/bin/install -p classify_sulcus /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/classify_sulcus libtool: install: /usr/bin/install -p clean_surface_labels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clean_surface_labels libtool: install: /usr/bin/install -p clip_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clip_tags libtool: install: /usr/bin/install -p close_surface /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/close_surface libtool: install: /usr/bin/install -p cluster_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/cluster_volume libtool: install: /usr/bin/install -p coalesce_lines /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/coalesce_lines libtool: install: /usr/bin/install -p compare_left_right /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_left_right libtool: install: /usr/bin/install -p compare_left_right_groups /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_left_right_groups libtool: install: /usr/bin/install -p compare_lengths /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_lengths libtool: install: /usr/bin/install -p composite_images /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_images libtool: install: /usr/bin/install -p composite_minc_images /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_minc_images libtool: install: /usr/bin/install -p composite_volumes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_volumes libtool: install: /usr/bin/install -p compute_bounding_view /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_bounding_view libtool: install: /usr/bin/install -p compute_resels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_resels libtool: install: /usr/bin/install -p concat_images /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/concat_images libtool: install: /usr/bin/install -p contour_slice /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/contour_slice libtool: install: /usr/bin/install -p convex_hull /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/convex_hull libtool: install: /usr/bin/install -p count_thresholded_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/count_thresholded_volume libtool: install: /usr/bin/install -p create_2d_sheet /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_2d_sheet libtool: install: /usr/bin/install -p create_2d_surface /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_2d_surface libtool: install: /usr/bin/install -p create_box /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_box libtool: install: /usr/bin/install -p create_four_volumes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_four_volumes libtool: install: /usr/bin/install -p create_label_map /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_label_map libtool: install: /usr/bin/install -p create_landmark_full_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_landmark_full_volume libtool: install: /usr/bin/install -p create_mahalanobis /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_mahalanobis libtool: install: /usr/bin/install -p create_surface_interpolation_lsq /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_surface_interpolation_lsq libtool: install: /usr/bin/install -p create_warping_points /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_warping_points libtool: install: /usr/bin/install -p diff_mahalanobis /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/diff_mahalanobis libtool: install: /usr/bin/install -p dilate_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dilate_volume libtool: install: /usr/bin/install -p dilate_volume_completely /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dilate_volume_completely libtool: install: /usr/bin/install -p dim_image /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dim_image libtool: install: /usr/bin/install -p dump_deformation_distances /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_deformation_distances libtool: install: /usr/bin/install -p dump_points_to_tag_file /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_points_to_tag_file libtool: install: /usr/bin/install -p dump_rms /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_rms libtool: install: /usr/bin/install -p dump_transform /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_transform libtool: install: /usr/bin/install -p dump_uv /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_uv libtool: install: /usr/bin/install -p evaluate /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/evaluate libtool: install: /usr/bin/install -p extract_tag_slice /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/extract_tag_slice libtool: install: /usr/bin/install -p extract_largest_line /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/extract_largest_line libtool: install: /usr/bin/install -p fill_sulci /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fill_sulci libtool: install: /usr/bin/install -p find_buried_surface /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_buried_surface libtool: install: /usr/bin/install -p find_image_bounding_box /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_image_bounding_box libtool: install: /usr/bin/install -p find_peaks /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_peaks libtool: install: /usr/bin/install -p find_surface_distances /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_surface_distances libtool: install: /usr/bin/install -p find_tag_outliers /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_tag_outliers libtool: install: /usr/bin/install -p find_vertex /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_vertex libtool: install: /usr/bin/install -p find_volume_centroid /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_volume_centroid libtool: install: /usr/bin/install -p fit_curve /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_curve libtool: install: /usr/bin/install -p fit_curve2 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_curve2 libtool: install: /usr/bin/install -p fit_3d /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_3d libtool: install: /usr/bin/install -p flatten_polygons /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_polygons libtool: install: /usr/bin/install -p flatten_sheet /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_sheet libtool: install: /usr/bin/install -p flatten_sheet3 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_sheet3 libtool: install: /usr/bin/install -p flatten_to_sphere /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_to_sphere libtool: install: /usr/bin/install -p flatten_to_sphere2 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_to_sphere2 libtool: install: /usr/bin/install -p flip_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flip_tags libtool: install: /usr/bin/install -p flip_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flip_volume libtool: install: /usr/bin/install -p f_prob /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/f_prob libtool: install: /usr/bin/install -p gaussian_blur_peaks /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/gaussian_blur_peaks libtool: install: /usr/bin/install -p get_tic /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/get_tic libtool: install: /usr/bin/install -p group_diff /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/group_diff libtool: install: /usr/bin/install -p histogram_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/histogram_volume libtool: install: /usr/bin/install -p intensity_statistics /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/intensity_statistics libtool: install: /usr/bin/install -p interpolate_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/interpolate_tags libtool: install: /usr/bin/install -p label_sulci /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/label_sulci libtool: install: /usr/bin/install -p labels_to_rgb /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/labels_to_rgb libtool: install: /usr/bin/install -p lookup_labels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/lookup_labels libtool: install: /usr/bin/install -p make_diff_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_diff_volume libtool: install: /usr/bin/install -p make_geodesic_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_geodesic_volume libtool: install: /usr/bin/install -p make_gradient_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_gradient_volume libtool: install: /usr/bin/install -p make_grid_lines /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_grid_lines libtool: install: /usr/bin/install -p make_line_links /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_line_links libtool: install: /usr/bin/install -p make_slice /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_slice libtool: install: /usr/bin/install -p make_surface_bitlist /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_surface_bitlist libtool: install: /usr/bin/install -p make_sphere_transform /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_sphere_transform libtool: install: /usr/bin/install -p map_colours_to_sphere /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_colours_to_sphere libtool: install: /usr/bin/install -p map_surface_to_sheet /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_surface_to_sheet libtool: install: /usr/bin/install -p map_sheets /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_sheets libtool: install: /usr/bin/install -p marching_cubes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/marching_cubes libtool: install: /usr/bin/install -p mask_values /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mask_values libtool: install: /usr/bin/install -p mask_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mask_volume libtool: install: /usr/bin/install -p match_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/match_tags libtool: install: /usr/bin/install -p mincdefrag /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincdefrag libtool: install: /usr/bin/install -p mincmask /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincmask libtool: install: /usr/bin/install -p mincskel /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincskel libtool: install: /usr/bin/install -p minctotag /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/minctotag libtool: install: /usr/bin/install -p minc_to_rgb /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/minc_to_rgb libtool: install: /usr/bin/install -p normalize_pet /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/normalize_pet libtool: install: /usr/bin/install -p place_images /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/place_images libtool: install: /usr/bin/install -p plane_polygon_intersect /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/plane_polygon_intersect libtool: install: /usr/bin/install -p preprocess_segmentation /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/preprocess_segmentation libtool: install: /usr/bin/install -p print_2d_coords /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_2d_coords libtool: install: /usr/bin/install -p print_all_labels /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_all_labels libtool: install: /usr/bin/install -p print_all_label_bounding_boxes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_all_label_bounding_boxes libtool: install: /usr/bin/install -p print_axis_angles /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_axis_angles libtool: install: /usr/bin/install -p print_volume_value /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_volume_value libtool: install: /usr/bin/install -p print_world_value /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_world_value libtool: install: /usr/bin/install -p print_world_values /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_world_values libtool: install: /usr/bin/install -p random_warp /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/random_warp libtool: install: /usr/bin/install -p reparameterize_line /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/reparameterize_line libtool: install: /usr/bin/install -p rgb_to_minc /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/rgb_to_minc libtool: install: /usr/bin/install -p scale_minc_image /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scale_minc_image libtool: install: /usr/bin/install -p scan_lines_to_polygons /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scan_lines_to_polygons libtool: install: /usr/bin/install -p scan_object_to_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scan_object_to_volume libtool: install: /usr/bin/install -p segment_probabilities /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/segment_probabilities libtool: install: /usr/bin/install -p spherical_resample /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/spherical_resample libtool: install: /usr/bin/install -p stats_tag_file /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/stats_tag_file libtool: install: /usr/bin/install -p subsample_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/subsample_volume libtool: install: /usr/bin/install -p surface_mask /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/surface_mask libtool: install: /usr/bin/install -p surface_mask2 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/surface_mask2 libtool: install: /usr/bin/install -p tag_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tag_volume libtool: install: /usr/bin/install -p tagtominc /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tagtominc libtool: install: /usr/bin/install -p threshold_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/threshold_volume libtool: install: /usr/bin/install -p trimesh_resample /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_resample libtool: install: /usr/bin/install -p trimesh_set_points /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_set_points libtool: install: /usr/bin/install -p trimesh_to_polygons /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_to_polygons libtool: install: /usr/bin/install -p tags_to_spheres /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tags_to_spheres libtool: install: /usr/bin/install -p transform_volume /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_volume libtool: install: /usr/bin/install -p transform_tags /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_tags libtool: install: /usr/bin/install -p transform_objects /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_objects libtool: install: /usr/bin/install -p two_surface_resample /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/two_surface_resample libtool: install: /usr/bin/install -p volume_object_evaluate /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/volume_object_evaluate /usr/bin/mkdir -p '/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin' /usr/bin/install -p nlfit_smr mritotal_suppress smooth_mask compute_icbm_vols multispectral_stx_registration sphere_resample_obj suppress_fat regional_thickness remap_to_lobes '/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin' make[1]: Nothing to be done for 'install-data-am'. make[1]: Leaving directory '/builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b' + find /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT -name '*.la' -delete + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 1.6.80-1.20120308git166303d.fc46 --unique-debug-suffix -1.6.80-1.20120308git166303d.fc46.x86_64 --unique-debug-src-base conglomerate-1.6.80-1.20120308git166303d.fc46.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 --remove-section .gnu.build.attributes -S debugsourcefiles.list /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b find-debuginfo: starting Extracting debug info from 132 files DWARF-compressing 132 files sepdebugcrcfix: Updated 132 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/conglomerate-1.6.80-1.20120308git166303d.fc46.x86_64 find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + COMPRESS='gzip -9 -n' + COMPRESS_EXT=.gz + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/bin/remap_to_lobes from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/regional_thickness from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/suppress_fat from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/sphere_resample_obj from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/multispectral_stx_registration from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/compute_icbm_vols from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/smooth_mask from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/mritotal_suppress from /usr/bin/env perl to #!/usr/bin/perl mangling shebang in /usr/bin/nlfit_smr from /usr/bin/env perl to #!/usr/bin/perl + /usr/lib/rpm/brp-remove-la-files + /usr/lib/rpm/redhat/brp-python-rpm-in-distinfo + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-det --brp -j4 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT Scanned 11 directories and 428 files, processed 0 inodes, 0 modified (0 replaced + 0 rewritten), 0 unsupported format, 0 errors + /usr/bin/linkdupes --brp /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr Scanned 10 directories and 428 files, considered 428 files, read 115 files, linked 0 files, 0 errors sum of sizes of linked files: 0 bytes Reading /builddir/build/BUILD/conglomerate-1.6.80-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.NAI9ZY + umask 022 + cd /builddir/build/BUILD/conglomerate-1.6.80-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b ++ ls -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin ++ wc -l + n=141 141 programs installed + test 141 -eq 141 + echo '141 programs installed' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/add_labels + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/apply_sphere_transform + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/autocrop_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/average_voxels + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/blur_surface + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/box_filter_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/box_filter_volume_nd + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/chamfer_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/chop_tags + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clamp_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/classify_sulcus + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clean_surface_labels + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/clip_tags + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/close_surface + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/cluster_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/coalesce_lines + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_left_right + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_left_right_groups + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compare_lengths + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_images + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_minc_images + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/composite_volumes + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_bounding_view + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_icbm_vols + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_icbm_vols /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_icbm_vols syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/compute_resels + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/concat_images + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/contour_slice + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/convex_hull + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/count_thresholded_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_2d_sheet + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_2d_surface + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_box + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_four_volumes + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_label_map + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_landmark_full_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_mahalanobis + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_surface_interpolation_lsq + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/create_warping_points + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/diff_mahalanobis + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dilate_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dilate_volume_completely + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dim_image + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_deformation_distances + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_points_to_tag_file + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_rms + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_transform + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/dump_uv + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/evaluate + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/extract_largest_line + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/extract_tag_slice + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/f_prob + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fill_sulci + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_buried_surface + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_image_bounding_box + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_peaks + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_surface_distances + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_tag_outliers + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_vertex + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/find_volume_centroid + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_3d + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_curve + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/fit_curve2 + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_polygons + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_sheet + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_sheet3 + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_to_sphere + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flatten_to_sphere2 + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flip_tags + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/flip_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/gaussian_blur_peaks + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/get_tic + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/group_diff + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/histogram_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/intensity_statistics + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/interpolate_tags + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/label_sulci + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/labels_to_rgb + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/lookup_labels + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_diff_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_geodesic_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_gradient_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_grid_lines + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_line_links + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_slice + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_sphere_transform + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/make_surface_bitlist + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_colours_to_sphere + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_sheets + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/map_surface_to_sheet + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/marching_cubes + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mask_values + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mask_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/match_tags + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/minc_to_rgb + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincdefrag + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincmask + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mincskel + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/minctotag + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mritotal_suppress + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mritotal_suppress /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/mritotal_suppress syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/multispectral_stx_registration + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/multispectral_stx_registration /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/multispectral_stx_registration syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/nlfit_smr + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/nlfit_smr /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/nlfit_smr syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/normalize_pet + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/place_images + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/plane_polygon_intersect + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/preprocess_segmentation + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_2d_coords + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_all_label_bounding_boxes + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_all_labels + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_axis_angles + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_volume_value + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_world_value + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/print_world_values + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/random_warp + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/regional_thickness + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/regional_thickness /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/regional_thickness syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/remap_to_lobes + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/remap_to_lobes /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/remap_to_lobes syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/reparameterize_line + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/rgb_to_minc + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scale_minc_image + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scan_lines_to_polygons + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/scan_object_to_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/segment_probabilities + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/smooth_mask + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/smooth_mask /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/smooth_mask syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/sphere_resample_obj + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/sphere_resample_obj /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/sphere_resample_obj syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/spherical_resample + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/stats_tag_file + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/subsample_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/suppress_fat + grep -q '^#!.*perl' + /usr/bin/perl -c /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/suppress_fat /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/suppress_fat syntax OK + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/surface_mask + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/surface_mask2 + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tag_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tags_to_spheres + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/tagtominc + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/threshold_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_objects + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_tags + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/transform_volume + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_resample + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + grep -q '^#!.*perl' + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_set_points + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/trimesh_to_polygons + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/two_surface_resample + grep -q '^#!.*perl' + for f in /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/* + head -1 /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/bin/volume_object_evaluate + grep -q '^#!.*perl' + RPM_EC=0 ++ jobs -p + exit 0 Processing files: conglomerate-1.6.80-1.20120308git166303d.fc46.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.SfB2SZ + umask 022 + cd /builddir/build/BUILD/conglomerate-1.6.80-build + cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b + DOCDIR=/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate + cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/AUTHORS /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate + cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/ChangeLog /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate + cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/NEWS /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate + cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/README /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate + cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/TODO /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/doc/conglomerate + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.npM6bf + umask 022 + cd /builddir/build/BUILD/conglomerate-1.6.80-build + cd conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b + LICENSEDIR=/builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/licenses/conglomerate + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/licenses/conglomerate + cp -pr /builddir/build/BUILD/conglomerate-1.6.80-build/conglomerate-166303dcfd95f83c54a1fdcdab1a63e6714f349b/COPYING /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT/usr/share/licenses/conglomerate + RPM_EC=0 ++ jobs -p + exit 0 Provides: conglomerate = 1.6.80-1.20120308git166303d.fc46 conglomerate(x86-64) = 1.6.80-1.20120308git166303d.fc46 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/perl libbicpl.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.23)(64bit) libm.so.6(GLIBC_2.29)(64bit) libminc2.so.5.3.0()(64bit) libnetcdf.so.22()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: conglomerate-debugsource-1.6.80-1.20120308git166303d.fc46.x86_64 Provides: conglomerate-debugsource = 1.6.80-1.20120308git166303d.fc46 conglomerate-debugsource(x86-64) = 1.6.80-1.20120308git166303d.fc46 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: conglomerate-debuginfo-1.6.80-1.20120308git166303d.fc46.x86_64 Provides: conglomerate-debuginfo = 1.6.80-1.20120308git166303d.fc46 conglomerate-debuginfo(x86-64) = 1.6.80-1.20120308git166303d.fc46 debuginfo(build-id) = 00b6c7c3094072bece065ede6f0cc5eec65c2b1e debuginfo(build-id) = 00da6800df4e2a53bd05e506275da9b6a1f6adb0 debuginfo(build-id) = 014d95955fe1bd0f18db743941a3e537a515e6be debuginfo(build-id) = 0227eaf398d9748c86fc9cde9c8e0e236f6bcda8 debuginfo(build-id) = 0341f5673a156d045d8f00a300e75bbd2402942b debuginfo(build-id) = 07b72c51523f5b639340080c66d43717ab15197f debuginfo(build-id) = 08965ecadee914ae0379b1251a96636b018bffc4 debuginfo(build-id) = 0964bb386cd1b18951f8c939291f3d01dd2bd226 debuginfo(build-id) = 0c415821c92a10403307f5fd63bd01216e3ffca1 debuginfo(build-id) = 0d595c377236aa74c429f5fab6da27ec53a77b0a debuginfo(build-id) = 164d865c33456e32eb806283fe4b0e417cdd81eb debuginfo(build-id) = 175661a58ae1f56a7b0b03bea8c3e86419a70d5d debuginfo(build-id) = 177e30f77e4ebc2479c717a27ec5d650418579c4 debuginfo(build-id) = 1f1f234d1e22717ce013140d7536c32ec34bff73 debuginfo(build-id) = 20365b194ce1cf0c275e842fd2f36c50e94a642c debuginfo(build-id) = 20f3da65b3ea7cc977345b18fa026fbc3a2b0524 debuginfo(build-id) = 23840ba5aadfdcce10e9f365b00739b8eeb0a185 debuginfo(build-id) = 265a3771ac8aba6237ff7c43509be873b7866c2e debuginfo(build-id) = 28d494ae1f339a86456d6c5029334b02b829bfd0 debuginfo(build-id) = 2910452bfc1426fa44361bb26a94c752da18f9ca debuginfo(build-id) = 294d3386d84f6935e4c41e1a3318292b7e5f3cf9 debuginfo(build-id) = 2a67b3ab8c6236523f6a807da0017b636e976a9c debuginfo(build-id) = 2b4ceda345c8dc1a3586f11516da6bcfd60f18e0 debuginfo(build-id) = 2e23f98948e1d7a816242b1c4dff30ff0a79d8f1 debuginfo(build-id) = 356316fd1b03d72710a030e9d9a3a4cfe5eb01c4 debuginfo(build-id) = 3654066cae2454267c360e940c04ea120f9eaaf6 debuginfo(build-id) = 3b7db7b45e73aaad7642ee69fa37e489294bd44f debuginfo(build-id) = 3bf94a969c9bebff68f9116a9e04bcf72e10f781 debuginfo(build-id) = 3cd0b31679cd83aad364b23850a9b8a837e6533e debuginfo(build-id) = 3dbe332e808143ce4b140ae95e8d4ac4eceb14ff debuginfo(build-id) = 3eb58ba697397b0edabc1820f6b83cbbdaf28046 debuginfo(build-id) = 40b2a946d5243a6f869e8a765b3f187311f2943b debuginfo(build-id) = 43c253e24e8ee555168bcb57531f2958826442ed debuginfo(build-id) = 483d260603f5851d899d04459a8685a09d1c08cf debuginfo(build-id) = 4851e7d3bb4a8dfe3928f8b8a96f184c84c38ad0 debuginfo(build-id) = 48c4fba0930d9750cf5f8e1409ad2118a8f2c0ab debuginfo(build-id) = 49d0bb2d7e584ee7a3200ccc09a38c3bf52d5e16 debuginfo(build-id) = 4a81c51c2134270060e3dbeff4021aa406e27eaf debuginfo(build-id) = 4afe4bae8d12991a6ca5612024d8ed7aa56b8242 debuginfo(build-id) = 4b2b2ecf4a68f904ff194a4e5d4e0fec03512ca0 debuginfo(build-id) = 4c7c51e21235e50784bc980567196adf1281a74b debuginfo(build-id) = 54449956d4d0c61ad58da69b06e35404f32e1117 debuginfo(build-id) = 56981950e7bb6e8dc917e97d86ef5f41af7b4318 debuginfo(build-id) = 576061fed9b29e0bea0d91e19f863ebd0ac79435 debuginfo(build-id) = 58afd35f108458692650ac8617388ae333eaed6f debuginfo(build-id) = 5935afba85e147e74a8213ed85ed02c1e48d43c8 debuginfo(build-id) = 5f14422c8043a4a1c29abdd8b76ce4371dbc7ab8 debuginfo(build-id) = 5f36064bd46c5b17ab1d687a8dca4ba87b016f15 debuginfo(build-id) = 5fb3d098ef80889b9cb15ac088717ac4b3fed001 debuginfo(build-id) = 61d908e5b510afa08f1a1e50eeb78434c90cab2a debuginfo(build-id) = 6309a630c3b204c7f47306bb855c1af06842558f debuginfo(build-id) = 637d9d97c80d993500cd11139748b9ca642e1751 debuginfo(build-id) = 63e34672d482da3a4796a20ea1f9b68c42376ced debuginfo(build-id) = 64a3da61294fe7cfb497675e583901091f5654a5 debuginfo(build-id) = 6625b6bff04fa3c4d3fe6ead2486ac09d576c6ec debuginfo(build-id) = 683f6d3ecfcbbdf1b9afd2e2466e010f76ed2d38 debuginfo(build-id) = 6a8f51ef4a37ff8e1c7d82a13a7ddd6c7204ed2c debuginfo(build-id) = 6de06514f3e4fac64b50d81bd0f0511af2d70947 debuginfo(build-id) = 716945a5f60b0b892d938282a1988b149d05109e debuginfo(build-id) = 72390674b96a7262f22ae2a2a4ca257958c828ae debuginfo(build-id) = 72befad446f863885203e41696b7342c9d0d95ed debuginfo(build-id) = 78a59b9641b461e9facbb80a07774779ae8a55a6 debuginfo(build-id) = 7905eded1ad2cce72c813c220c4103d29cb1f1ad debuginfo(build-id) = 791009d39256579e711c7320ee5cd5373978c507 debuginfo(build-id) = 7b93b06cdb39036cdffaf5382a98611b0ed07fc7 debuginfo(build-id) = 7bd1565438c2690f7f8103bb4aea60d5a2346aa7 debuginfo(build-id) = 7c8447ac31b9fc2483038c0f3b41488b196127dd debuginfo(build-id) = 7dccde7a93191f1635aeb94c3268bb98edd9c416 debuginfo(build-id) = 7e79c24c13fbda9b289dc8711d2b35dfac12b67c debuginfo(build-id) = 7fb8110f0226fdb66c177dbd72612fda93b0d91e debuginfo(build-id) = 8033fffb565b831accee92337af24309a1fc3a6c debuginfo(build-id) = 836827c68aa7252baf8cebdd59d1b15a6627a260 debuginfo(build-id) = 844532c0b9055649ae5434664bb57125330ab1e8 debuginfo(build-id) = 8457742431932fb44a68bb6c20e2be870c174bbd debuginfo(build-id) = 8600ba2e14c75a6985a3e320d3098077c7632714 debuginfo(build-id) = 87e3ada3fb4ec661ddb46e48d1772dd1e2c1defa debuginfo(build-id) = 8a48f15deb3a81a8204dc26dda0038a1aaae7a8c debuginfo(build-id) = 8d04b766a25aa87d1f0aaea8ed36a5bf511de4e7 debuginfo(build-id) = 8db9b9383f9a11710d28cba9c6f149f7cd5ccb17 debuginfo(build-id) = 8f319ca397914d43b6d033fc8182aac86e3ab7b0 debuginfo(build-id) = 930154e1bbf7a970bd2977d9cbd5716d44e60b8d debuginfo(build-id) = 936b375160f5aba5d81dde64466524735ab82022 debuginfo(build-id) = 94aaaf115a2cae89634e1a1f3dbeeab538cb37cd debuginfo(build-id) = 96b4cf2605d79ffa0bff5ef1846816b11543deb3 debuginfo(build-id) = 98f287dca062a4c89f0cdaa3238751d4c8378a07 debuginfo(build-id) = 9c120d3441a4c6dbde267ee4aa8490a7ba9aebb6 debuginfo(build-id) = 9d4b450cf23d419685833cf6661a31a40d2e0b84 debuginfo(build-id) = 9d4cfb14dfd4bc1e714046df87f23d71c0b68a4b debuginfo(build-id) = 9d59abd9f51baa0b855eddd86b74b3940905e5a0 debuginfo(build-id) = 9d6bb733d5b168a65b700d7556fa527cf2206ca8 debuginfo(build-id) = 9e2b0f2d7f0bf7ed5f76cf5bbc151bae3f6b589c debuginfo(build-id) = a40d731bf9a8ddfc69dca4b946f8c71ba7dc50a8 debuginfo(build-id) = a77f649fcbb996f08bddc53fc79bbb44e62eabc2 debuginfo(build-id) = a79a1362a5b75499b6611783b62b2771144daddd debuginfo(build-id) = aad55fcfaaa3d0381c1ce63bcb71b73ca959d3bc debuginfo(build-id) = acb8296e466c4259671092760dd2f1d43c3aaebf debuginfo(build-id) = adc75cc65c757821220e6856de5289fb042c58df debuginfo(build-id) = b55203cffe78b1a427bd82a7878b25f06bbaccfc debuginfo(build-id) = b66e7c9d71476593177502b782d54626aedc1513 debuginfo(build-id) = c1cb4879da3ea578509b987e3166d2088017d6cf debuginfo(build-id) = c471f97d72a78a779dbbbd20ff02c4997c30b5c9 debuginfo(build-id) = c4edff2cb7b418715081e1d11cb8b9271f88993c debuginfo(build-id) = c5832b178b02b4624bd42b86c39ac24ca29e45d1 debuginfo(build-id) = c804d54b51c5b95e17e1eefd387c6fad48081770 debuginfo(build-id) = ca0489e315dab47def6ea11516c45e79641eae8f debuginfo(build-id) = d2ad3a4514b61d5aac30899336715af70b560ae2 debuginfo(build-id) = d4f0a93d55cef8db57714dfce64d818b92cab1a9 debuginfo(build-id) = d8a5dc6be807e7ac86da2785516feecd80872f50 debuginfo(build-id) = d9cbe30babbbd2a197d4845a2b939b3a99246d34 debuginfo(build-id) = da244245db3b727466fcd2cf4c331bd9885fa9a0 debuginfo(build-id) = dbf6b4c1bc5031baca02dfa8342a83e48eaee0f4 debuginfo(build-id) = dd8b73c1014eaa3b84786632ba65b47c59b7e163 debuginfo(build-id) = de80947b27f194dfdd2e3823de942831d330e28e debuginfo(build-id) = e06279b5ad60a641058b455908f688c198eef9a4 debuginfo(build-id) = e14b3eb980546442a663524dd80d4a59bd146854 debuginfo(build-id) = e3dbe6ed46f721f0e89f502fc7b4bef54451b2a4 debuginfo(build-id) = e86faa68fd8682f2bf70ff7844a995b8d01b5a2c debuginfo(build-id) = e9b32a70b10b8e9571a8dba43e7ed2b11fd271e8 debuginfo(build-id) = e9ff7e8c9f14ffaf497b5b25f03f8ea9d072e308 debuginfo(build-id) = ef514ce34b8625ebb1ad51079d2cddb06c36b50d debuginfo(build-id) = f0bd8d325f1e6a49a4793ce1a5fe2535a6f5457a debuginfo(build-id) = f1612888e7f88919af4e4086ff002d7e1666a782 debuginfo(build-id) = f3fb35e4baaf32eabe08277942a1317968bfc953 debuginfo(build-id) = f70952423422c7cb2a6ac39a06bb5edce55791e7 debuginfo(build-id) = f7774cd37847f8883e54905c9f920ca191ca9749 debuginfo(build-id) = faebd1989698f4a756eb34dd2999e71b9b84b8c9 debuginfo(build-id) = fcb59ffb3c9b2d7bf1bc6322d4d021f6d443caf8 debuginfo(build-id) = fcf78260218a7afed0b630fbf6903c20cbd44c71 debuginfo(build-id) = fde9b3a585ba25f933974a071fbc59ddd8b5dd68 debuginfo(build-id) = fdf5e5e9bde1b5626da65a10753ced8a44b55df4 debuginfo(build-id) = fef971cbb193c364cd6a2a6d3bf20c2245c38f72 debuginfo(build-id) = ff2ce301c1c42c6350c28a61bf11e94e41a7b857 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: conglomerate-debugsource(x86-64) = 1.6.80-1.20120308git166303d.fc46 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/conglomerate-1.6.80-build/BUILDROOT Wrote: /builddir/build/RPMS/conglomerate-debugsource-1.6.80-1.20120308git166303d.fc46.x86_64.rpm Wrote: /builddir/build/RPMS/conglomerate-1.6.80-1.20120308git166303d.fc46.x86_64.rpm Wrote: /builddir/build/RPMS/conglomerate-debuginfo-1.6.80-1.20120308git166303d.fc46.x86_64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.Mgxpfm + umask 022 + cd /builddir/build/BUILD/conglomerate-1.6.80-build + test -d /builddir/build/BUILD/conglomerate-1.6.80-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/conglomerate-1.6.80-build + rm -rf /builddir/build/BUILD/conglomerate-1.6.80-build + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild conglomerate-1.6.80-1.20120308git166303d.fc46.src.rpm Finish: build phase for conglomerate-1.6.80-1.20120308git166303d.fc46.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1790274095.888052/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names INFO: Done(/var/lib/copr-rpmbuild/results/conglomerate-1.6.80-1.20120308git166303d.fc46.src.rpm) Config(child) 0 minutes 44 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "conglomerate", "epoch": null, "version": "1.6.80", "release": "1.20120308git166303d.fc46", "arch": "x86_64" }, { "name": "conglomerate", "epoch": null, "version": "1.6.80", "release": "1.20120308git166303d.fc46", "arch": "src" }, { "name": "conglomerate-debuginfo", "epoch": null, "version": "1.6.80", "release": "1.20120308git166303d.fc46", "arch": "x86_64" }, { "name": "conglomerate-debugsource", "epoch": null, "version": "1.6.80", "release": "1.20120308git166303d.fc46", "arch": "x86_64" } ] } RPMResults finished