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/// \file ScoreLET.cc
/// \brief Implementation of the ScoreLET class

// This example is provided by the Geant4-DNA collaboration
// chem6 example is derived from chem4 and chem5 examples
//
// Any report or published results obtained using the Geant4-DNA software
// shall cite the following Geant4-DNA collaboration publication:
// J. Appl. Phys. 125 (2019) 104301
// Med. Phys. 45 (2018) e722-e739
// J. Comput. Phys. 274 (2014) 841-882
// Med. Phys. 37 (2010) 4692-4708
// Int. J. Model. Simul. Sci. Comput. 1 (2010) 157-178
// The Geant4-DNA web site is available at http://geant4-dna.org
//
// Authors: W. G. Shin and S. Incerti (CENBG, France)

#include "ScoreLET.hh"

#include "G4RunManager.hh"
#include "G4SystemOfUnits.hh"

ScoreLET::ScoreLET(G4String name) : G4VPrimitiveScorer(name), G4UImessenger() {
  fpLETDir = std::make_unique<G4UIdirectory>("/scorer/LET/");
  fpLETDir->SetGuidance("LET scorer commands");
  fpCutoff = std::make_unique<G4UIcmdWithADoubleAndUnit>("/scorer/LET/cutoff", this);
}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....

void ScoreLET::SetNewValue(G4UIcommand *command, const G4String newValue) {
  if (command == fpCutoff.get()) {
    fCutoff = G4UIcmdWithADoubleAndUnit::GetNewDoubleValue(newValue);
  }
}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....

G4bool ScoreLET::ProcessHits(G4Step *aStep, G4TouchableHistory * /*TH*/) {
  // In order to follow the primary track
  // regardless charge increasing or decreasing
  if (aStep->GetTrack()->GetTrackID() != 1
      && aStep->GetTrack()->GetParticleDefinition()->GetPDGEncoding() != 11) {
    G4int subType = aStep->GetTrack()->GetCreatorProcess()->GetProcessSubType();
    if (subType == 56 || subType == 57) {
      fTrackID = aStep->GetTrack()->GetTrackID();
    }
  }

  // Ignore the step if it is not primary.
  if (aStep->GetTrack()->GetTrackID() != fTrackID) { return false; }
  fStepL += aStep->GetStepLength() / um;
  fEdep += aStep->GetTotalEnergyDeposit() / keV;

  G4int subType = aStep->GetPostStepPoint()->GetProcessDefinedStep()->GetProcessSubType();

  // Don't add the kinetic energy of primary particle
  if (subType == 56 || subType == 57) { return false; }

  const std::vector<const G4Track *> *secondary = aStep->GetSecondaryInCurrentStep();

  size_t nbtrk = secondary->size();

  if (nbtrk) {
    for (size_t lp = 0; lp < nbtrk; lp++) {
      // Store the kinetic energy of secondaries
      // which less than cutoff energy.
      if ((*secondary)[lp]->GetKineticEnergy() / eV < fCutoff / eV) {
        fEdep += (*secondary)[lp]->GetKineticEnergy() / keV;
      }
    }
  }
  return true;
}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....

void ScoreLET::Initialize(G4HCofThisEvent *HCE) {
  fEvtMap = new G4THitsMap<G4double>(GetMultiFunctionalDetector()->GetName(), GetName());

  fEvtMap->clear();
  fNEvent = 0;
  static G4int HCID = -1;
  if (HCID < 0) {
    HCID = GetCollectionID(0);
  }
  HCE->AddHitsCollection(HCID, fEvtMap);
}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....

void ScoreLET::EndOfEvent(G4HCofThisEvent *) {
  fLET = fEdep / fStepL;
  if (!G4RunManager::GetRunManager()->GetCurrentEvent()->IsAborted()) {
    fEvtMap->add(fNEvent, fLET);
    fNEvent++;
  }
  fTrackID = 1;
  fLET = 0;
  fEdep = 0;
  fStepL = 0;
}

//....oooOO0OOooo........oooOO0OOooo........oooOO0OOooo........oooOO0OOooo.....
