%global pypi_name dandi

Name:           python-%{pypi_name}
Version:        0.81.0
Release:        1%{?dist}
Summary:        Command-line client and Python library for the DANDI Archive

License:        Apache-2.0
URL:            https://github.com/dandi/dandi-cli
Source0:        %{pypi_source %{pypi_name}}

BuildArch:      noarch

BuildRequires:  python3-devel

%global _description %{expand:
dandi is the command-line client and Python library for the DANDI Archive
(dandiarchive.org), the BRAIN Initiative archive for cellular
neurophysiology and neuroimaging data in NWB, BIDS and OME-Zarr. It
downloads Dandisets and assets, organizes NWB files into the DANDI layout,
validates metadata, and uploads.

Not available in this build: two optional validators that Fedora can't
provide. BIDS validation (bids-validator-deno, a Deno-compiled binary) and
Zarr format 3 validation (tensorstore, a Bazel-built C++ library) report
that the validator is missing; every other command works. Either can be
added with pip install --user if needed.}

%description %{_description}

%package -n     python3-%{pypi_name}
Summary:        %{summary}

%description -n python3-%{pypi_name} %{_description}


%prep
%autosetup -p1 -n %{pypi_name}-%{version}
# See the description: neither has a Fedora build. dandi imports tensorstore only inside
# its Zarr v3 validator (dandi/files/zarr.py) and runs bids-validator-deno as an external
# command (dandi/bids_validator_deno/), so dropping them from the requirements leaves
# everything else working; %%check proves the CLI and the zarr v2 path.
sed -i -E '/^    "(bids-validator-deno|tensorstore) >= [0-9.]+",$/d' pyproject.toml
if grep -qE '"(bids-validator-deno|tensorstore)' pyproject.toml; then exit 1; fi
# bidsschematools ~= 1.0, but rawhide has 2.0.0. dandi calls one function,
# bidsschematools.validator.validate_bids(paths, exclude_files=...), and reads bids_version,
# path_tracking, schema_tracking and match_listing from its result; 2.0.0 keeps all of them.
# %%check runs a real BIDS validation through dandi on whichever version is installed.
sed -i 's/^    "bidsschematools ~= 1.0",$/    "bidsschematools >= 1.0, < 3",/' pyproject.toml
grep -q '"bidsschematools >= 1.0, < 3"' pyproject.toml


%generate_buildrequires
%pyproject_buildrequires


%build
%pyproject_wheel


%install
%pyproject_install
%pyproject_save_files -l %{pypi_name}


%check
export HOME=$PWD
# No etelemetry version check against the network during the build.
export DANDI_NO_ET=1
%pyproject_check_import -e '%{pypi_name}.tests*' -e '%{pypi_name}.*.tests*' -e '%{pypi_name}.pytest_plugin'
%{py3_test_envvars} %{buildroot}%{_bindir}/dandi --version
%{py3_test_envvars} %{buildroot}%{_bindir}/dandi --help > /dev/null
# Offline: parse archive URLs, and checksum a local Zarr v2 store the way upload does
# (zarr_checksum), so the dropped tensorstore isn't on the path dandi actually uses.
%{py3_test_envvars} %{python3} - <<'EOF'
from dandi.dandiarchive import parse_dandi_url
u = parse_dandi_url("DANDI:000027/0.210831.2033")
assert u.dandiset_id == "000027", u
import numpy as np, zarr, tempfile, os
from dandi.support.digests import get_zarr_checksum
from pathlib import Path
d = tempfile.mkdtemp()
z = zarr.open(os.path.join(d, "x.zarr"), mode="w", shape=(4, 4), chunks=(2, 2), dtype="i4")
z[:] = np.arange(16).reshape(4, 4)
print("zarr checksum", get_zarr_checksum(Path(d, "x.zarr")))
# BIDS validation through bidsschematools (the relaxed cap): a valid minimal dataset gives
# no errors for its valid file, and a misnamed file is reported.
import json, bidsschematools
from dandi.validate._core import validate_bids
b = Path(tempfile.mkdtemp(), "bids")
(b / "sub-01" / "anat").mkdir(parents=True)
(b / "dataset_description.json").write_text(json.dumps({"Name": "t", "BIDSVersion": "1.9.0"}))
(b / "sub-01" / "anat" / "sub-01_T1w.nii.gz").write_bytes(b"")
(b / "sub-01" / "anat" / "sub-01_notasuffix.nii.gz").write_bytes(b"")
res = validate_bids(b)
txt = [f"{getattr(r, 'path', '')} {r.message}" for r in res]
print("bidsschematools", bidsschematools.__version__, "->", len(res), "results")
for t in txt: print("  ", t[:160])
assert any("notasuffix" in t for t in txt), txt
EOF


%files -n python3-%{pypi_name} -f %{pyproject_files}
%doc README.md CHANGELOG.md
%{_bindir}/dandi


%changelog
* Mon Oct 12 2026 Morgan Hough <morgan.hough@gmail.com> - 0.81.0-1
- Initial package. Without bids-validator-deno and tensorstore (no Fedora builds
  possible); the deno BIDS validator and Zarr v3 validation report it missing.
  bidsschematools cap relaxed to < 3 (rawhide has 2.0.0, same API); %%check
  validates a small BIDS dataset with it.