Warning: Permanently added '18.215.184.57' (ED25519) to the list of known hosts. Running: /usr/bin/copr-rpmbuild --verbose --drop-resultdir --build-id 5932104 --chroot fedora-rawhide-i386 --detached Version: 0.64 PID: 16214 Logging PID: 16215 Task: {'appstream': False, 'background': False, 'build_id': 5932104, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-i386', 'enable_net': False, 'fedora_review': False, 'git_hash': '597967cd526102a2959b06ac019a73efb718f688', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/mmuzila/libtiff-4.5/smoldyn', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'smoldyn', 'package_version': '2.67.3-4.fc38', 'project_dirname': 'libtiff-4.5', 'project_name': 'libtiff-4.5', 'project_owner': 'mmuzila', 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/mmuzila/libtiff-4.5/fedora-rawhide-i386/', 'id': 'copr_base', 'name': 'Copr repository'}], 'sandbox': 'mmuzila/libtiff-4.5--mmuzila', 'source_json': {}, 'source_type': None, 'submitter': 'mmuzila', 'tags': [], 'task_id': '5932104-fedora-rawhide-i386', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/mmuzila/libtiff-4.5/smoldyn /var/lib/copr-rpmbuild/workspace/workdir-w777_is2/smoldyn --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/mmuzila/libtiff-4.5/smoldyn', '/var/lib/copr-rpmbuild/workspace/workdir-w777_is2/smoldyn', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-w777_is2/smoldyn'... Running: git checkout 597967cd526102a2959b06ac019a73efb718f688 cmd: ['git', 'checkout', '597967cd526102a2959b06ac019a73efb718f688'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-w777_is2/smoldyn rc: 0 stdout: stderr: Note: switching to '597967cd526102a2959b06ac019a73efb718f688'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 597967c automatic import of smoldyn Running: copr-distgit-client sources /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-w777_is2/smoldyn rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading Smoldyn-2.67.3.tar.gz INFO: Calling: curl -H Pragma: -o Smoldyn-2.67.3.tar.gz --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/mmuzila/libtiff-4.5/smoldyn/Smoldyn-2.67.3.tar.gz/md5/061227e5683e484b0dd465d378e5390b/Smoldyn-2.67.3.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 92.0M 100 92.0M 0 0 73.4M 0 0:00:01 0:00:01 --:--:-- 73.4M INFO: Reading stdout from command: md5sum Smoldyn-2.67.3.tar.gz Running (timeout=18000): unbuffer mock --buildsrpm --spec /var/lib/copr-rpmbuild/workspace/workdir-w777_is2/smoldyn/smoldyn.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-w777_is2/smoldyn --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1684437149.692264 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 3.5 starting (python version = 3.11.0, NVR = mock-3.5-1.fc37)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-w777_is2/smoldyn/smoldyn.spec) Config(fedora-rawhide-i686) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-i686-bootstrap-1684437149.692264/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.5 INFO: Mock Version: 3.5 Start(bootstrap): dnf install No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 16 MB/s | 1.8 MB 00:00 local 132 MB/s | 60 MB 00:00 Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing: dnf noarch 4.15.1-1.fc39 local 464 k dnf-plugins-core noarch 4.4.1-1.fc39 local 38 k Installing dependencies: alternatives i686 1.24-1.fc39 local 40 k audit-libs i686 3.1.1-1.fc39 local 124 k basesystem noarch 11-15.fc38 local 7.0 k bash i686 5.2.15-3.fc38 local 1.8 M bzip2-libs i686 1.0.8-13.fc38 local 42 k ca-certificates noarch 2023.2.60-2.fc38 local 845 k coreutils i686 9.3-1.fc39 local 1.1 M coreutils-common i686 9.3-1.fc39 local 2.1 M crypto-policies noarch 20230420-1.git3d08ae7.fc39 local 65 k curl i686 8.1.0-1.fc39 local 346 k cyrus-sasl-lib i686 2.1.28-10.fc39 local 856 k dbus-libs i686 1:1.14.6-1.fc38 local 167 k dnf-data noarch 4.15.1-1.fc39 local 38 k elfutils-default-yama-scope noarch 0.189-2.fc39 local 15 k elfutils-libelf i686 0.189-2.fc39 local 203 k elfutils-libs i686 0.189-2.fc39 local 290 k expat i686 2.5.0-2.fc38 local 115 k fedora-gpg-keys noarch 39-0.1 local 116 k fedora-release noarch 39-0.11 local 12 k fedora-release-common noarch 39-0.11 local 22 k fedora-release-identity-basic noarch 39-0.11 local 13 k fedora-repos noarch 39-0.1 local 9.4 k fedora-repos-rawhide noarch 39-0.1 local 9.0 k file-libs i686 5.44-3.fc39 local 737 k filesystem i686 3.18-4.fc39 local 1.1 M findutils i686 1:4.9.0-4.fc39 local 493 k gawk i686 5.1.1-5.fc38 local 1.0 M gdbm-libs i686 1:1.23-3.fc38 local 60 k glib2 i686 2.76.2-1.fc39 local 2.8 M glibc i686 2.37.9000-10.fc39 local 1.9 M glibc-common i686 2.37.9000-10.fc39 local 337 k glibc-minimal-langpack i686 2.37.9000-10.fc39 local 53 k gmp i686 1:6.2.1-4.fc38 local 305 k gnupg2 i686 2.4.1-1.fc39 local 2.7 M gnutls i686 3.8.0-3.fc39 local 1.1 M gpgme i686 1.17.1-5.fc39 local 219 k grep i686 3.9-1.fc39 local 291 k ima-evm-utils i686 1.4-7.fc38 local 63 k json-c i686 0.16-4.fc38 local 44 k keyutils-libs i686 1.6.1-6.fc38 local 32 k krb5-libs i686 1.20.1-9.fc39 local 766 k libacl i686 2.3.1-7.fc39 local 25 k libarchive i686 3.6.1-5.fc39 local 442 k libassuan i686 2.5.5-6.fc38 local 69 k libattr i686 2.5.1-7.fc39 local 18 k libb2 i686 0.98.1-8.fc38 local 29 k libblkid i686 2.39-2.fc39 local 128 k libbrotli i686 1.0.9-11.fc38 local 318 k libcap i686 2.48-6.fc38 local 69 k libcap-ng i686 0.8.3-5.fc38 local 33 k libcom_err i686 1.46.5-4.fc38 local 26 k libcomps i686 0.1.19-1.fc39 local 84 k libcurl i686 8.1.0-1.fc39 local 347 k libdnf i686 0.70.1-1.fc39 local 718 k libeconf i686 0.4.0-5.fc38 local 29 k libevent i686 2.1.12-8.fc38 local 277 k libffi i686 3.4.4-2.fc38 local 36 k libfsverity i686 1.4-9.fc38 local 20 k libgcc i686 13.1.1-2.fc39 local 115 k libgcrypt i686 1.10.2-1.fc39 local 482 k libgomp i686 13.1.1-2.fc39 local 319 k libgpg-error i686 1.47-1.fc39 local 228 k libidn2 i686 2.3.4-2.fc38 local 154 k libksba i686 1.6.3-2.fc38 local 160 k libmodulemd i686 2.15.0-2.fc39 local 238 k libmount i686 2.39-2.fc39 local 161 k libnghttp2 i686 1.53.0-1.fc39 local 81 k libnsl2 i686 2.0.0-5.fc38 local 31 k libpsl i686 0.21.2-2.fc38 local 66 k librepo i686 1.15.1-2.fc38 local 102 k libreport-filesystem noarch 2.17.10-1.fc39 local 14 k libselinux i686 3.5-1.fc39 local 92 k libsemanage i686 3.5-2.fc39 local 129 k libsepol i686 3.5-1.fc39 local 337 k libsigsegv i686 2.14-4.fc38 local 27 k libsmartcols i686 2.39-2.fc39 local 69 k libsolv i686 0.7.24-2.fc39 local 440 k libssh i686 0.10.5-1.fc39 local 226 k libssh-config noarch 0.10.5-1.fc39 local 9.0 k libstdc++ i686 13.1.1-2.fc39 local 928 k libtasn1 i686 4.19.0-2.fc38 local 75 k libtirpc i686 1.3.3-1.rc1.fc39 local 101 k libunistring i686 1.1-3.fc38 local 552 k libunistring1.0 i686 1.0-1.fc38 local 547 k libuuid i686 2.39-2.fc39 local 29 k libverto i686 0.3.2-5.fc38 local 21 k libxcrypt i686 4.4.33-7.fc39 local 123 k libxml2 i686 2.10.4-1.fc39 local 744 k libyaml i686 0.2.5-9.fc38 local 62 k libzstd i686 1.5.5-1.fc39 local 290 k lua-libs i686 5.4.4-9.fc39 local 149 k lz4-libs i686 1.9.4-3.fc39 local 70 k mpdecimal i686 2.5.1-6.fc38 local 91 k mpfr i686 4.1.1-3.fc38 local 636 k ncurses-base noarch 6.4-3.20230114.fc38 local 62 k ncurses-libs i686 6.4-3.20230114.fc38 local 351 k nettle i686 3.8-3.fc38 local 425 k npth i686 1.6-13.fc39 local 25 k openldap i686 2.6.4-2.fc39 local 273 k openssl-libs i686 1:3.0.8-2.fc39 local 2.1 M p11-kit i686 0.24.1-6.fc38 local 325 k p11-kit-trust i686 0.24.1-6.fc38 local 134 k pcre2 i686 10.42-1.fc38.1 local 232 k pcre2-syntax noarch 10.42-1.fc38.1 local 144 k popt i686 1.19-2.fc38 local 62 k publicsuffix-list-dafsa noarch 20230318-1.fc39 local 60 k python-pip-wheel noarch 23.0.1-2.fc39 local 1.4 M python-setuptools-wheel noarch 67.7.2-2.fc39 local 661 k python3 i686 3.11.3-1.fc39 local 28 k python3-dateutil noarch 1:2.8.2-6.fc39 local 349 k python3-dbus i686 1.3.2-2.fc38 local 150 k python3-distro noarch 1.8.0-3.fc39 local 45 k python3-dnf noarch 4.15.1-1.fc39 local 563 k python3-dnf-plugins-core noarch 4.4.1-1.fc39 local 284 k python3-gpg i686 1.17.1-5.fc39 local 277 k python3-hawkey i686 0.70.1-1.fc39 local 110 k python3-libcomps i686 0.1.19-1.fc39 local 51 k python3-libdnf i686 0.70.1-1.fc39 local 838 k python3-libs i686 3.11.3-1.fc39 local 9.3 M python3-rpm i686 4.18.1-3.fc39 local 74 k python3-six noarch 1.16.0-9.fc38 local 42 k python3-systemd i686 235-2.fc38 local 103 k readline i686 8.2-3.fc38 local 218 k rpm i686 4.18.1-3.fc39 local 541 k rpm-build-libs i686 4.18.1-3.fc39 local 102 k rpm-libs i686 4.18.1-3.fc39 local 343 k rpm-sequoia i686 1.4.0-2.fc39 local 926 k rpm-sign-libs i686 4.18.1-3.fc39 local 27 k sed i686 4.8-12.fc38 local 300 k setup noarch 2.14.3-3.fc39 local 146 k shadow-utils i686 2:4.13-6.fc39 local 1.2 M sqlite-libs i686 3.41.2-1.fc39 local 707 k systemd-libs i686 253.4-1.fc39 local 687 k tpm2-tss i686 4.0.1-3.fc38 local 602 k tzdata noarch 2023c-1.fc39 local 433 k xz-libs i686 5.4.3-1.fc39 local 118 k zchunk-libs i686 1.3.1-1.fc39 local 55 k zlib i686 1.2.13-3.fc38 local 93 k Transaction Summary ================================================================================ Install 140 Packages Total download size: 58 M Installed size: 203 M Downloading Packages: (1/140): alternatives-1.24-1.fc39.i686.rpm 609 kB/s | 40 kB 00:00 (2/140): basesystem-11-15.fc38.noarch.rpm 105 kB/s | 7.0 kB 00:00 (3/140): audit-libs-3.1.1-1.fc39.i686.rpm 1.8 MB/s | 124 kB 00:00 (4/140): bzip2-libs-1.0.8-13.fc38.i686.rpm 11 MB/s | 42 kB 00:00 (5/140): ca-certificates-2023.2.60-2.fc38.noarc 50 MB/s | 845 kB 00:00 (6/140): bash-5.2.15-3.fc38.i686.rpm 67 MB/s | 1.8 MB 00:00 (7/140): coreutils-9.3-1.fc39.i686.rpm 50 MB/s | 1.1 MB 00:00 (8/140): crypto-policies-20230420-1.git3d08ae7. 18 MB/s | 65 kB 00:00 (9/140): curl-8.1.0-1.fc39.i686.rpm 57 MB/s | 346 kB 00:00 (10/140): dbus-libs-1.14.6-1.fc38.i686.rpm 37 MB/s | 167 kB 00:00 (11/140): cyrus-sasl-lib-2.1.28-10.fc39.i686.rp 68 MB/s | 856 kB 00:00 (12/140): dnf-data-4.15.1-1.fc39.noarch.rpm 12 MB/s | 38 kB 00:00 (13/140): dnf-4.15.1-1.fc39.noarch.rpm 58 MB/s | 464 kB 00:00 (14/140): dnf-plugins-core-4.4.1-1.fc39.noarch. 16 MB/s | 38 kB 00:00 (15/140): elfutils-default-yama-scope-0.189-2.f 6.9 MB/s | 15 kB 00:00 (16/140): coreutils-common-9.3-1.fc39.i686.rpm 63 MB/s | 2.1 MB 00:00 (17/140): elfutils-libelf-0.189-2.fc39.i686.rpm 32 MB/s | 203 kB 00:00 (18/140): elfutils-libs-0.189-2.fc39.i686.rpm 46 MB/s | 290 kB 00:00 (19/140): expat-2.5.0-2.fc38.i686.rpm 30 MB/s | 115 kB 00:00 (20/140): fedora-release-39-0.11.noarch.rpm 6.1 MB/s | 12 kB 00:00 (21/140): fedora-gpg-keys-39-0.1.noarch.rpm 30 MB/s | 116 kB 00:00 (22/140): fedora-release-common-39-0.11.noarch. 8.8 MB/s | 22 kB 00:00 (23/140): fedora-release-identity-basic-39-0.11 5.6 MB/s | 13 kB 00:00 (24/140): fedora-repos-39-0.1.noarch.rpm 4.1 MB/s | 9.4 kB 00:00 (25/140): fedora-repos-rawhide-39-0.1.noarch.rp 4.0 MB/s | 9.0 kB 00:00 (26/140): findutils-4.9.0-4.fc39.i686.rpm 53 MB/s | 493 kB 00:00 (27/140): file-libs-5.44-3.fc39.i686.rpm 59 MB/s | 737 kB 00:00 (28/140): filesystem-3.18-4.fc39.i686.rpm 68 MB/s | 1.1 MB 00:00 (29/140): gdbm-libs-1.23-3.fc38.i686.rpm 12 MB/s | 60 kB 00:00 (30/140): gawk-5.1.1-5.fc38.i686.rpm 60 MB/s | 1.0 MB 00:00 (31/140): glibc-common-2.37.9000-10.fc39.i686.r 40 MB/s | 337 kB 00:00 (32/140): glibc-minimal-langpack-2.37.9000-10.f 16 MB/s | 53 kB 00:00 (33/140): glibc-2.37.9000-10.fc39.i686.rpm 74 MB/s | 1.9 MB 00:00 (34/140): gmp-6.2.1-4.fc38.i686.rpm 49 MB/s | 305 kB 00:00 (35/140): glib2-2.76.2-1.fc39.i686.rpm 73 MB/s | 2.8 MB 00:00 (36/140): gpgme-1.17.1-5.fc39.i686.rpm 43 MB/s | 219 kB 00:00 (37/140): gnutls-3.8.0-3.fc39.i686.rpm 61 MB/s | 1.1 MB 00:00 (38/140): grep-3.9-1.fc39.i686.rpm 47 MB/s | 291 kB 00:00 (39/140): ima-evm-utils-1.4-7.fc38.i686.rpm 14 MB/s | 63 kB 00:00 (40/140): json-c-0.16-4.fc38.i686.rpm 15 MB/s | 44 kB 00:00 (41/140): keyutils-libs-1.6.1-6.fc38.i686.rpm 10 MB/s | 32 kB 00:00 (42/140): libacl-2.3.1-7.fc39.i686.rpm 8.1 MB/s | 25 kB 00:00 (43/140): gnupg2-2.4.1-1.fc39.i686.rpm 74 MB/s | 2.7 MB 00:00 (44/140): krb5-libs-1.20.1-9.fc39.i686.rpm 59 MB/s | 766 kB 00:00 (45/140): libassuan-2.5.5-6.fc38.i686.rpm 16 MB/s | 69 kB 00:00 (46/140): libarchive-3.6.1-5.fc39.i686.rpm 45 MB/s | 442 kB 00:00 (47/140): libattr-2.5.1-7.fc39.i686.rpm 7.2 MB/s | 18 kB 00:00 (48/140): libb2-0.98.1-8.fc38.i686.rpm 12 MB/s | 29 kB 00:00 (49/140): libblkid-2.39-2.fc39.i686.rpm 29 MB/s | 128 kB 00:00 (50/140): libcap-2.48-6.fc38.i686.rpm 19 MB/s | 69 kB 00:00 (51/140): libbrotli-1.0.9-11.fc38.i686.rpm 53 MB/s | 318 kB 00:00 (52/140): libcap-ng-0.8.3-5.fc38.i686.rpm 12 MB/s | 33 kB 00:00 (53/140): libcom_err-1.46.5-4.fc38.i686.rpm 8.9 MB/s | 26 kB 00:00 (54/140): libcomps-0.1.19-1.fc39.i686.rpm 27 MB/s | 84 kB 00:00 (55/140): libeconf-0.4.0-5.fc38.i686.rpm 8.7 MB/s | 29 kB 00:00 (56/140): libcurl-8.1.0-1.fc39.i686.rpm 50 MB/s | 347 kB 00:00 (57/140): libffi-3.4.4-2.fc38.i686.rpm 12 MB/s | 36 kB 00:00 (58/140): libdnf-0.70.1-1.fc39.i686.rpm 68 MB/s | 718 kB 00:00 (59/140): libevent-2.1.12-8.fc38.i686.rpm 44 MB/s | 277 kB 00:00 (60/140): libfsverity-1.4-9.fc38.i686.rpm 7.2 MB/s | 20 kB 00:00 (61/140): libgcc-13.1.1-2.fc39.i686.rpm 37 MB/s | 115 kB 00:00 (62/140): libgomp-13.1.1-2.fc39.i686.rpm 56 MB/s | 319 kB 00:00 (63/140): libgcrypt-1.10.2-1.fc39.i686.rpm 61 MB/s | 482 kB 00:00 (64/140): libgpg-error-1.47-1.fc39.i686.rpm 35 MB/s | 228 kB 00:00 (65/140): libidn2-2.3.4-2.fc38.i686.rpm 31 MB/s | 154 kB 00:00 (66/140): libksba-1.6.3-2.fc38.i686.rpm 34 MB/s | 160 kB 00:00 (67/140): libmodulemd-2.15.0-2.fc39.i686.rpm 45 MB/s | 238 kB 00:00 (68/140): libmount-2.39-2.fc39.i686.rpm 38 MB/s | 161 kB 00:00 (69/140): libnghttp2-1.53.0-1.fc39.i686.rpm 21 MB/s | 81 kB 00:00 (70/140): libnsl2-2.0.0-5.fc38.i686.rpm 10 MB/s | 31 kB 00:00 (71/140): libpsl-0.21.2-2.fc38.i686.rpm 25 MB/s | 66 kB 00:00 (72/140): libreport-filesystem-2.17.10-1.fc39.n 6.8 MB/s | 14 kB 00:00 (73/140): librepo-1.15.1-2.fc38.i686.rpm 28 MB/s | 102 kB 00:00 (74/140): libselinux-3.5-1.fc39.i686.rpm 26 MB/s | 92 kB 00:00 (75/140): libsemanage-3.5-2.fc39.i686.rpm 30 MB/s | 129 kB 00:00 (76/140): libsigsegv-2.14-4.fc38.i686.rpm 11 MB/s | 27 kB 00:00 (77/140): libsepol-3.5-1.fc39.i686.rpm 54 MB/s | 337 kB 00:00 (78/140): libsmartcols-2.39-2.fc39.i686.rpm 21 MB/s | 69 kB 00:00 (79/140): libssh-config-0.10.5-1.fc39.noarch.rp 3.1 MB/s | 9.0 kB 00:00 (80/140): libssh-0.10.5-1.fc39.i686.rpm 46 MB/s | 226 kB 00:00 (81/140): libsolv-0.7.24-2.fc39.i686.rpm 59 MB/s | 440 kB 00:00 (82/140): libtasn1-4.19.0-2.fc38.i686.rpm 23 MB/s | 75 kB 00:00 (83/140): libtirpc-1.3.3-1.rc1.fc39.i686.rpm 24 MB/s | 101 kB 00:00 (84/140): libunistring-1.1-3.fc38.i686.rpm 69 MB/s | 552 kB 00:00 (85/140): libstdc++-13.1.1-2.fc39.i686.rpm 61 MB/s | 928 kB 00:00 (86/140): libuuid-2.39-2.fc39.i686.rpm 10 MB/s | 29 kB 00:00 (87/140): libunistring1.0-1.0-1.fc38.i686.rpm 51 MB/s | 547 kB 00:00 (88/140): libverto-0.3.2-5.fc38.i686.rpm 8.8 MB/s | 21 kB 00:00 (89/140): libxcrypt-4.4.33-7.fc39.i686.rpm 38 MB/s | 123 kB 00:00 (90/140): libyaml-0.2.5-9.fc38.i686.rpm 17 MB/s | 62 kB 00:00 (91/140): libzstd-1.5.5-1.fc39.i686.rpm 51 MB/s | 290 kB 00:00 (92/140): lua-libs-5.4.4-9.fc39.i686.rpm 32 MB/s | 149 kB 00:00 (93/140): libxml2-2.10.4-1.fc39.i686.rpm 67 MB/s | 744 kB 00:00 (94/140): lz4-libs-1.9.4-3.fc39.i686.rpm 20 MB/s | 70 kB 00:00 (95/140): mpdecimal-2.5.1-6.fc38.i686.rpm 27 MB/s | 91 kB 00:00 (96/140): ncurses-base-6.4-3.20230114.fc38.noar 18 MB/s | 62 kB 00:00 (97/140): mpfr-4.1.1-3.fc38.i686.rpm 73 MB/s | 636 kB 00:00 (98/140): ncurses-libs-6.4-3.20230114.fc38.i686 46 MB/s | 351 kB 00:00 (99/140): npth-1.6-13.fc39.i686.rpm 9.4 MB/s | 25 kB 00:00 (100/140): nettle-3.8-3.fc38.i686.rpm 53 MB/s | 425 kB 00:00 (101/140): openldap-2.6.4-2.fc39.i686.rpm 39 MB/s | 273 kB 00:00 (102/140): p11-kit-0.24.1-6.fc38.i686.rpm 48 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Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-4.fc39.i686 1/1 Preparing : 1/1 Installing : tzdata-2023c-1.fc39.noarch 1/140 Installing : crypto-policies-20230420-1.git3d08ae7.fc39.noarc 2/140 Running scriptlet: crypto-policies-20230420-1.git3d08ae7.fc39.noarc 2/140 Installing : fedora-release-identity-basic-39-0.11.noarch 3/140 Installing : python-setuptools-wheel-67.7.2-2.fc39.noarch 4/140 Installing : publicsuffix-list-dafsa-20230318-1.fc39.noarch 5/140 Installing : pcre2-syntax-10.42-1.fc38.1.noarch 6/140 Installing : ncurses-base-6.4-3.20230114.fc38.noarch 7/140 Installing : libssh-config-0.10.5-1.fc39.noarch 8/140 Installing : libreport-filesystem-2.17.10-1.fc39.noarch 9/140 Installing : dnf-data-4.15.1-1.fc39.noarch 10/140 warning: /etc/dnf/dnf.conf created as /etc/dnf/dnf.conf.rpmnew Installing : fedora-gpg-keys-39-0.1.noarch 11/140 Installing : fedora-release-39-0.11.noarch 12/140 Installing : fedora-release-common-39-0.11.noarch 13/140 Installing : 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glibc-minimal-langpack-2.37.9000-10.fc39.i686 34/140 Verifying : gmp-1:6.2.1-4.fc38.i686 35/140 Verifying : gnupg2-2.4.1-1.fc39.i686 36/140 Verifying : gnutls-3.8.0-3.fc39.i686 37/140 Verifying : gpgme-1.17.1-5.fc39.i686 38/140 Verifying : grep-3.9-1.fc39.i686 39/140 Verifying : ima-evm-utils-1.4-7.fc38.i686 40/140 Verifying : json-c-0.16-4.fc38.i686 41/140 Verifying : keyutils-libs-1.6.1-6.fc38.i686 42/140 Verifying : krb5-libs-1.20.1-9.fc39.i686 43/140 Verifying : libacl-2.3.1-7.fc39.i686 44/140 Verifying : libarchive-3.6.1-5.fc39.i686 45/140 Verifying : libassuan-2.5.5-6.fc38.i686 46/140 Verifying : libattr-2.5.1-7.fc39.i686 47/140 Verifying : libb2-0.98.1-8.fc38.i686 48/140 Verifying : libblkid-2.39-2.fc39.i686 49/140 Verifying : libbrotli-1.0.9-11.fc38.i686 50/140 Verifying : libcap-2.48-6.fc38.i686 51/140 Verifying : libcap-ng-0.8.3-5.fc38.i686 52/140 Verifying : libcom_err-1.46.5-4.fc38.i686 53/140 Verifying : libcomps-0.1.19-1.fc39.i686 54/140 Verifying : libcurl-8.1.0-1.fc39.i686 55/140 Verifying : libdnf-0.70.1-1.fc39.i686 56/140 Verifying : libeconf-0.4.0-5.fc38.i686 57/140 Verifying : libevent-2.1.12-8.fc38.i686 58/140 Verifying : libffi-3.4.4-2.fc38.i686 59/140 Verifying : libfsverity-1.4-9.fc38.i686 60/140 Verifying : libgcc-13.1.1-2.fc39.i686 61/140 Verifying : libgcrypt-1.10.2-1.fc39.i686 62/140 Verifying : libgomp-13.1.1-2.fc39.i686 63/140 Verifying : libgpg-error-1.47-1.fc39.i686 64/140 Verifying : libidn2-2.3.4-2.fc38.i686 65/140 Verifying : libksba-1.6.3-2.fc38.i686 66/140 Verifying : libmodulemd-2.15.0-2.fc39.i686 67/140 Verifying : libmount-2.39-2.fc39.i686 68/140 Verifying : libnghttp2-1.53.0-1.fc39.i686 69/140 Verifying : libnsl2-2.0.0-5.fc38.i686 70/140 Verifying : libpsl-0.21.2-2.fc38.i686 71/140 Verifying : librepo-1.15.1-2.fc38.i686 72/140 Verifying : libreport-filesystem-2.17.10-1.fc39.noarch 73/140 Verifying : libselinux-3.5-1.fc39.i686 74/140 Verifying : libsemanage-3.5-2.fc39.i686 75/140 Verifying : libsepol-3.5-1.fc39.i686 76/140 Verifying : libsigsegv-2.14-4.fc38.i686 77/140 Verifying : libsmartcols-2.39-2.fc39.i686 78/140 Verifying : libsolv-0.7.24-2.fc39.i686 79/140 Verifying : libssh-0.10.5-1.fc39.i686 80/140 Verifying : libssh-config-0.10.5-1.fc39.noarch 81/140 Verifying : libstdc++-13.1.1-2.fc39.i686 82/140 Verifying : libtasn1-4.19.0-2.fc38.i686 83/140 Verifying : libtirpc-1.3.3-1.rc1.fc39.i686 84/140 Verifying : libunistring-1.1-3.fc38.i686 85/140 Verifying : libunistring1.0-1.0-1.fc38.i686 86/140 Verifying : libuuid-2.39-2.fc39.i686 87/140 Verifying : libverto-0.3.2-5.fc38.i686 88/140 Verifying : libxcrypt-4.4.33-7.fc39.i686 89/140 Verifying : libxml2-2.10.4-1.fc39.i686 90/140 Verifying : libyaml-0.2.5-9.fc38.i686 91/140 Verifying : libzstd-1.5.5-1.fc39.i686 92/140 Verifying : lua-libs-5.4.4-9.fc39.i686 93/140 Verifying : lz4-libs-1.9.4-3.fc39.i686 94/140 Verifying : mpdecimal-2.5.1-6.fc38.i686 95/140 Verifying : mpfr-4.1.1-3.fc38.i686 96/140 Verifying : ncurses-base-6.4-3.20230114.fc38.noarch 97/140 Verifying : ncurses-libs-6.4-3.20230114.fc38.i686 98/140 Verifying : nettle-3.8-3.fc38.i686 99/140 Verifying : npth-1.6-13.fc39.i686 100/140 Verifying : openldap-2.6.4-2.fc39.i686 101/140 Verifying : openssl-libs-1:3.0.8-2.fc39.i686 102/140 Verifying : p11-kit-0.24.1-6.fc38.i686 103/140 Verifying : p11-kit-trust-0.24.1-6.fc38.i686 104/140 Verifying : pcre2-10.42-1.fc38.1.i686 105/140 Verifying : pcre2-syntax-10.42-1.fc38.1.noarch 106/140 Verifying : popt-1.19-2.fc38.i686 107/140 Verifying : publicsuffix-list-dafsa-20230318-1.fc39.noarch 108/140 Verifying : python-pip-wheel-23.0.1-2.fc39.noarch 109/140 Verifying : python-setuptools-wheel-67.7.2-2.fc39.noarch 110/140 Verifying : python3-3.11.3-1.fc39.i686 111/140 Verifying : python3-dateutil-1:2.8.2-6.fc39.noarch 112/140 Verifying : python3-dbus-1.3.2-2.fc38.i686 113/140 Verifying : python3-distro-1.8.0-3.fc39.noarch 114/140 Verifying : python3-dnf-4.15.1-1.fc39.noarch 115/140 Verifying : python3-dnf-plugins-core-4.4.1-1.fc39.noarch 116/140 Verifying : python3-gpg-1.17.1-5.fc39.i686 117/140 Verifying : python3-hawkey-0.70.1-1.fc39.i686 118/140 Verifying : python3-libcomps-0.1.19-1.fc39.i686 119/140 Verifying : python3-libdnf-0.70.1-1.fc39.i686 120/140 Verifying : python3-libs-3.11.3-1.fc39.i686 121/140 Verifying : python3-rpm-4.18.1-3.fc39.i686 122/140 Verifying : python3-six-1.16.0-9.fc38.noarch 123/140 Verifying : python3-systemd-235-2.fc38.i686 124/140 Verifying : readline-8.2-3.fc38.i686 125/140 Verifying : rpm-4.18.1-3.fc39.i686 126/140 Verifying : rpm-build-libs-4.18.1-3.fc39.i686 127/140 Verifying : rpm-libs-4.18.1-3.fc39.i686 128/140 Verifying : rpm-sequoia-1.4.0-2.fc39.i686 129/140 Verifying : rpm-sign-libs-4.18.1-3.fc39.i686 130/140 Verifying : sed-4.8-12.fc38.i686 131/140 Verifying : setup-2.14.3-3.fc39.noarch 132/140 Verifying : shadow-utils-2:4.13-6.fc39.i686 133/140 Verifying : sqlite-libs-3.41.2-1.fc39.i686 134/140 Verifying : systemd-libs-253.4-1.fc39.i686 135/140 Verifying : tpm2-tss-4.0.1-3.fc38.i686 136/140 Verifying : tzdata-2023c-1.fc39.noarch 137/140 Verifying : xz-libs-5.4.3-1.fc39.i686 138/140 Verifying : zchunk-libs-1.3.1-1.fc39.i686 139/140 Verifying : zlib-1.2.13-3.fc38.i686 140/140 Installed products updated. Installed: alternatives-1.24-1.fc39.i686 audit-libs-3.1.1-1.fc39.i686 basesystem-11-15.fc38.noarch bash-5.2.15-3.fc38.i686 bzip2-libs-1.0.8-13.fc38.i686 ca-certificates-2023.2.60-2.fc38.noarch coreutils-9.3-1.fc39.i686 coreutils-common-9.3-1.fc39.i686 crypto-policies-20230420-1.git3d08ae7.fc39.noarch curl-8.1.0-1.fc39.i686 cyrus-sasl-lib-2.1.28-10.fc39.i686 dbus-libs-1:1.14.6-1.fc38.i686 dnf-4.15.1-1.fc39.noarch dnf-data-4.15.1-1.fc39.noarch dnf-plugins-core-4.4.1-1.fc39.noarch elfutils-default-yama-scope-0.189-2.fc39.noarch elfutils-libelf-0.189-2.fc39.i686 elfutils-libs-0.189-2.fc39.i686 expat-2.5.0-2.fc38.i686 fedora-gpg-keys-39-0.1.noarch fedora-release-39-0.11.noarch fedora-release-common-39-0.11.noarch fedora-release-identity-basic-39-0.11.noarch fedora-repos-39-0.1.noarch fedora-repos-rawhide-39-0.1.noarch file-libs-5.44-3.fc39.i686 filesystem-3.18-4.fc39.i686 findutils-1:4.9.0-4.fc39.i686 gawk-5.1.1-5.fc38.i686 gdbm-libs-1:1.23-3.fc38.i686 glib2-2.76.2-1.fc39.i686 glibc-2.37.9000-10.fc39.i686 glibc-common-2.37.9000-10.fc39.i686 glibc-minimal-langpack-2.37.9000-10.fc39.i686 gmp-1:6.2.1-4.fc38.i686 gnupg2-2.4.1-1.fc39.i686 gnutls-3.8.0-3.fc39.i686 gpgme-1.17.1-5.fc39.i686 grep-3.9-1.fc39.i686 ima-evm-utils-1.4-7.fc38.i686 json-c-0.16-4.fc38.i686 keyutils-libs-1.6.1-6.fc38.i686 krb5-libs-1.20.1-9.fc39.i686 libacl-2.3.1-7.fc39.i686 libarchive-3.6.1-5.fc39.i686 libassuan-2.5.5-6.fc38.i686 libattr-2.5.1-7.fc39.i686 libb2-0.98.1-8.fc38.i686 libblkid-2.39-2.fc39.i686 libbrotli-1.0.9-11.fc38.i686 libcap-2.48-6.fc38.i686 libcap-ng-0.8.3-5.fc38.i686 libcom_err-1.46.5-4.fc38.i686 libcomps-0.1.19-1.fc39.i686 libcurl-8.1.0-1.fc39.i686 libdnf-0.70.1-1.fc39.i686 libeconf-0.4.0-5.fc38.i686 libevent-2.1.12-8.fc38.i686 libffi-3.4.4-2.fc38.i686 libfsverity-1.4-9.fc38.i686 libgcc-13.1.1-2.fc39.i686 libgcrypt-1.10.2-1.fc39.i686 libgomp-13.1.1-2.fc39.i686 libgpg-error-1.47-1.fc39.i686 libidn2-2.3.4-2.fc38.i686 libksba-1.6.3-2.fc38.i686 libmodulemd-2.15.0-2.fc39.i686 libmount-2.39-2.fc39.i686 libnghttp2-1.53.0-1.fc39.i686 libnsl2-2.0.0-5.fc38.i686 libpsl-0.21.2-2.fc38.i686 librepo-1.15.1-2.fc38.i686 libreport-filesystem-2.17.10-1.fc39.noarch libselinux-3.5-1.fc39.i686 libsemanage-3.5-2.fc39.i686 libsepol-3.5-1.fc39.i686 libsigsegv-2.14-4.fc38.i686 libsmartcols-2.39-2.fc39.i686 libsolv-0.7.24-2.fc39.i686 libssh-0.10.5-1.fc39.i686 libssh-config-0.10.5-1.fc39.noarch libstdc++-13.1.1-2.fc39.i686 libtasn1-4.19.0-2.fc38.i686 libtirpc-1.3.3-1.rc1.fc39.i686 libunistring-1.1-3.fc38.i686 libunistring1.0-1.0-1.fc38.i686 libuuid-2.39-2.fc39.i686 libverto-0.3.2-5.fc38.i686 libxcrypt-4.4.33-7.fc39.i686 libxml2-2.10.4-1.fc39.i686 libyaml-0.2.5-9.fc38.i686 libzstd-1.5.5-1.fc39.i686 lua-libs-5.4.4-9.fc39.i686 lz4-libs-1.9.4-3.fc39.i686 mpdecimal-2.5.1-6.fc38.i686 mpfr-4.1.1-3.fc38.i686 ncurses-base-6.4-3.20230114.fc38.noarch ncurses-libs-6.4-3.20230114.fc38.i686 nettle-3.8-3.fc38.i686 npth-1.6-13.fc39.i686 openldap-2.6.4-2.fc39.i686 openssl-libs-1:3.0.8-2.fc39.i686 p11-kit-0.24.1-6.fc38.i686 p11-kit-trust-0.24.1-6.fc38.i686 pcre2-10.42-1.fc38.1.i686 pcre2-syntax-10.42-1.fc38.1.noarch popt-1.19-2.fc38.i686 publicsuffix-list-dafsa-20230318-1.fc39.noarch python-pip-wheel-23.0.1-2.fc39.noarch python-setuptools-wheel-67.7.2-2.fc39.noarch python3-3.11.3-1.fc39.i686 python3-dateutil-1:2.8.2-6.fc39.noarch python3-dbus-1.3.2-2.fc38.i686 python3-distro-1.8.0-3.fc39.noarch python3-dnf-4.15.1-1.fc39.noarch python3-dnf-plugins-core-4.4.1-1.fc39.noarch python3-gpg-1.17.1-5.fc39.i686 python3-hawkey-0.70.1-1.fc39.i686 python3-libcomps-0.1.19-1.fc39.i686 python3-libdnf-0.70.1-1.fc39.i686 python3-libs-3.11.3-1.fc39.i686 python3-rpm-4.18.1-3.fc39.i686 python3-six-1.16.0-9.fc38.noarch python3-systemd-235-2.fc38.i686 readline-8.2-3.fc38.i686 rpm-4.18.1-3.fc39.i686 rpm-build-libs-4.18.1-3.fc39.i686 rpm-libs-4.18.1-3.fc39.i686 rpm-sequoia-1.4.0-2.fc39.i686 rpm-sign-libs-4.18.1-3.fc39.i686 sed-4.8-12.fc38.i686 setup-2.14.3-3.fc39.noarch shadow-utils-2:4.13-6.fc39.i686 sqlite-libs-3.41.2-1.fc39.i686 systemd-libs-253.4-1.fc39.i686 tpm2-tss-4.0.1-3.fc38.i686 tzdata-2023c-1.fc39.noarch xz-libs-5.4.3-1.fc39.i686 zchunk-libs-1.3.1-1.fc39.i686 zlib-1.2.13-3.fc38.i686 Complete! Finish(bootstrap): dnf install Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-i686-1684437149.692264/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.5 INFO: Mock Version: 3.5 Start: dnf install No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 37 kB/s | 1.5 kB 00:00 Copr repository 18 MB/s | 1.8 MB 00:00 local 86 kB/s | 3.8 kB 00:00 Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing group/module packages: bash i686 5.2.15-3.fc38 local 1.8 M bzip2 i686 1.0.8-13.fc38 local 53 k coreutils i686 9.3-1.fc39 local 1.1 M cpio i686 2.13-14.fc38 local 275 k diffutils i686 3.9-4.fc39 local 393 k fedora-release noarch 39-0.11 local 12 k findutils i686 1:4.9.0-4.fc39 local 493 k gawk i686 5.1.1-5.fc38 local 1.0 M glibc-minimal-langpack i686 2.37.9000-10.fc39 local 53 k grep i686 3.9-1.fc39 local 291 k gzip i686 1.12-3.fc38 local 157 k info i686 7.0.3-1.fc39 local 185 k patch i686 2.7.6-21.fc39 local 138 k redhat-rpm-config noarch 254-1.fc39 local 76 k rpm-build i686 4.18.1-3.fc39 local 69 k sed i686 4.8-12.fc38 local 300 k shadow-utils i686 2:4.13-6.fc39 local 1.2 M tar i686 2:1.34-8.fc39 local 895 k unzip i686 6.0-60.fc38 local 179 k util-linux i686 2.39-2.fc39 local 1.1 M which i686 2.21-39.fc39 local 42 k xz i686 5.4.3-1.fc39 local 533 k Installing dependencies: alternatives i686 1.24-1.fc39 local 40 k ansible-srpm-macros noarch 1-10.fc39 local 21 k audit-libs i686 3.1.1-1.fc39 local 124 k authselect i686 1.4.2-2.fc38 local 141 k authselect-libs i686 1.4.2-2.fc38 local 239 k basesystem noarch 11-15.fc38 local 7.0 k binutils i686 2.40-7.fc39 local 5.8 M binutils-gold i686 2.40-7.fc39 local 864 k bzip2-libs i686 1.0.8-13.fc38 local 42 k ca-certificates noarch 2023.2.60-2.fc38 local 845 k coreutils-common i686 9.3-1.fc39 local 2.1 M cracklib i686 2.9.7-31.fc38 local 81 k crypto-policies noarch 20230420-1.git3d08ae7.fc39 local 65 k curl i686 8.1.0-1.fc39 local 346 k cyrus-sasl-lib i686 2.1.28-10.fc39 local 856 k debugedit i686 5.0-7.fc38 local 79 k dwz i686 0.15-2.fc38 local 139 k ed i686 1.19-2.fc38 local 78 k efi-srpm-macros noarch 5-7.fc38 local 22 k elfutils i686 0.189-2.fc39 local 551 k elfutils-debuginfod-client i686 0.189-2.fc39 local 40 k elfutils-default-yama-scope noarch 0.189-2.fc39 local 15 k elfutils-libelf i686 0.189-2.fc39 local 203 k elfutils-libs i686 0.189-2.fc39 local 290 k fedora-gpg-keys noarch 39-0.1 local 116 k fedora-release-common noarch 39-0.11 local 22 k fedora-release-identity-basic noarch 39-0.11 local 13 k fedora-repos noarch 39-0.1 local 9.4 k fedora-repos-rawhide noarch 39-0.1 local 9.0 k file i686 5.44-3.fc39 local 50 k file-libs i686 5.44-3.fc39 local 737 k filesystem i686 3.18-4.fc39 local 1.1 M fonts-srpm-macros noarch 1:2.0.5-11.fc38 local 26 k fpc-srpm-macros noarch 1.3-7.fc38 local 7.8 k gdb-minimal i686 13.1-5.fc39 local 4.5 M gdbm-libs i686 1:1.23-3.fc38 local 60 k ghc-srpm-macros noarch 1.6.1-1.fc38 local 8.0 k glibc i686 2.37.9000-10.fc39 local 1.9 M glibc-common i686 2.37.9000-10.fc39 local 337 k glibc-gconv-extra i686 2.37.9000-10.fc39 local 1.6 M gmp i686 1:6.2.1-4.fc38 local 305 k gnat-srpm-macros noarch 6-2.fc38 local 8.8 k go-srpm-macros noarch 3.2.0-3.fc39 local 27 k jansson i686 2.13.1-6.fc38 local 46 k kernel-srpm-macros noarch 1.0-18.fc39 local 9.4 k keyutils-libs i686 1.6.1-6.fc38 local 32 k krb5-libs i686 1.20.1-9.fc39 local 766 k libacl i686 2.3.1-7.fc39 local 25 k libarchive i686 3.6.1-5.fc39 local 442 k libattr i686 2.5.1-7.fc39 local 18 k libblkid i686 2.39-2.fc39 local 128 k libbrotli i686 1.0.9-11.fc38 local 318 k libcap i686 2.48-6.fc38 local 69 k libcap-ng i686 0.8.3-5.fc38 local 33 k libcom_err i686 1.46.5-4.fc38 local 26 k libcurl i686 8.1.0-1.fc39 local 347 k libdb i686 5.3.28-55.fc38 local 822 k libeconf i686 0.4.0-5.fc38 local 29 k libevent i686 2.1.12-8.fc38 local 277 k libfdisk i686 2.39-2.fc39 local 176 k libffi i686 3.4.4-2.fc38 local 36 k libgcc i686 13.1.1-2.fc39 local 115 k libgomp i686 13.1.1-2.fc39 local 319 k libidn2 i686 2.3.4-2.fc38 local 154 k libmount i686 2.39-2.fc39 local 161 k libnghttp2 i686 1.53.0-1.fc39 local 81 k libnsl2 i686 2.0.0-5.fc38 local 31 k libpkgconf i686 1.9.4-2.fc39 local 41 k libpsl i686 0.21.2-2.fc38 local 66 k libpwquality i686 1.4.5-3.fc38 local 108 k libselinux i686 3.5-1.fc39 local 92 k libsemanage i686 3.5-2.fc39 local 129 k libsepol i686 3.5-1.fc39 local 337 k libsigsegv i686 2.14-4.fc38 local 27 k libsmartcols i686 2.39-2.fc39 local 69 k libssh i686 0.10.5-1.fc39 local 226 k libssh-config noarch 0.10.5-1.fc39 local 9.0 k libstdc++ i686 13.1.1-2.fc39 local 928 k libtasn1 i686 4.19.0-2.fc38 local 75 k libtirpc i686 1.3.3-1.rc1.fc39 local 101 k libunistring1.0 i686 1.0-1.fc38 local 547 k libutempter i686 1.2.1-9.fc39 local 26 k libuuid i686 2.39-2.fc39 local 29 k libverto i686 0.3.2-5.fc38 local 21 k libxcrypt i686 4.4.33-7.fc39 local 123 k libxml2 i686 2.10.4-1.fc39 local 744 k libzstd i686 1.5.5-1.fc39 local 290 k lua-libs i686 5.4.4-9.fc39 local 149 k lua-srpm-macros noarch 1-8.fc38 local 8.6 k lz4-libs i686 1.9.4-3.fc39 local 70 k mpfr i686 4.1.1-3.fc38 local 636 k ncurses-base noarch 6.4-3.20230114.fc38 local 62 k ncurses-libs i686 6.4-3.20230114.fc38 local 351 k ocaml-srpm-macros noarch 7-3.fc38 local 13 k openblas-srpm-macros noarch 2-13.fc38 local 7.5 k openldap i686 2.6.4-2.fc39 local 273 k openssl-libs i686 1:3.0.8-2.fc39 local 2.1 M p11-kit i686 0.24.1-6.fc38 local 325 k p11-kit-trust i686 0.24.1-6.fc38 local 134 k package-notes-srpm-macros noarch 0.5-7.fc38 local 11 k pam i686 1.5.2-19.fc39 local 511 k pam-libs i686 1.5.2-19.fc39 local 60 k pcre2 i686 10.42-1.fc38.1 local 232 k pcre2-syntax noarch 10.42-1.fc38.1 local 144 k perl-srpm-macros noarch 1-48.fc38 local 8.4 k pkgconf i686 1.9.4-2.fc39 local 43 k pkgconf-m4 noarch 1.9.4-2.fc39 local 14 k pkgconf-pkg-config i686 1.9.4-2.fc39 local 9.5 k popt i686 1.19-2.fc38 local 62 k publicsuffix-list-dafsa noarch 20230318-1.fc39 local 60 k pyproject-srpm-macros noarch 1.8.0-1.fc39 local 15 k python-srpm-macros noarch 3.11-10.fc39 local 26 k qt5-srpm-macros noarch 5.15.9-1.fc39 local 8.1 k readline i686 8.2-3.fc38 local 218 k rpm i686 4.18.1-3.fc39 local 541 k rpm-build-libs i686 4.18.1-3.fc39 local 102 k rpm-libs i686 4.18.1-3.fc39 local 343 k rpm-sequoia i686 1.4.0-2.fc39 local 926 k rpmautospec-rpm-macros noarch 0.3.5-1.fc38 local 9.3 k rust-srpm-macros noarch 24-1.fc39 local 12 k setup noarch 2.14.3-3.fc39 local 146 k sqlite-libs i686 3.41.2-1.fc39 local 707 k systemd-libs i686 253.4-1.fc39 local 687 k tzdata noarch 2023c-1.fc39 local 433 k util-linux-core i686 2.39-2.fc39 local 488 k xxhash-libs i686 0.8.1-4.fc38 local 54 k xz-libs i686 5.4.3-1.fc39 local 118 k zip i686 3.0-36.fc38 local 267 k zlib i686 1.2.13-3.fc38 local 93 k zstd i686 1.5.5-1.fc39 local 451 k Installing Groups: build Transaction Summary ================================================================================ Install 152 Packages Total size: 53 M Installed size: 177 M Downloading Packages: [SKIPPED] alternatives-1.24-1.fc39.i686.rpm: Already downloaded [SKIPPED] ansible-srpm-macros-1-10.fc39.noarch.rpm: Already downloaded [SKIPPED] audit-libs-3.1.1-1.fc39.i686.rpm: Already downloaded [SKIPPED] authselect-1.4.2-2.fc38.i686.rpm: Already downloaded [SKIPPED] authselect-libs-1.4.2-2.fc38.i686.rpm: Already downloaded [SKIPPED] basesystem-11-15.fc38.noarch.rpm: Already downloaded [SKIPPED] bash-5.2.15-3.fc38.i686.rpm: Already downloaded [SKIPPED] binutils-2.40-7.fc39.i686.rpm: Already downloaded [SKIPPED] binutils-gold-2.40-7.fc39.i686.rpm: Already downloaded [SKIPPED] bzip2-1.0.8-13.fc38.i686.rpm: Already downloaded [SKIPPED] bzip2-libs-1.0.8-13.fc38.i686.rpm: Already downloaded [SKIPPED] ca-certificates-2023.2.60-2.fc38.noarch.rpm: Already downloaded [SKIPPED] coreutils-9.3-1.fc39.i686.rpm: Already downloaded [SKIPPED] coreutils-common-9.3-1.fc39.i686.rpm: Already downloaded [SKIPPED] cpio-2.13-14.fc38.i686.rpm: Already downloaded [SKIPPED] cracklib-2.9.7-31.fc38.i686.rpm: Already downloaded [SKIPPED] crypto-policies-20230420-1.git3d08ae7.fc39.noarch.rpm: Already downloaded [SKIPPED] curl-8.1.0-1.fc39.i686.rpm: Already downloaded [SKIPPED] cyrus-sasl-lib-2.1.28-10.fc39.i686.rpm: Already downloaded [SKIPPED] debugedit-5.0-7.fc38.i686.rpm: Already downloaded [SKIPPED] diffutils-3.9-4.fc39.i686.rpm: Already downloaded [SKIPPED] dwz-0.15-2.fc38.i686.rpm: Already downloaded [SKIPPED] ed-1.19-2.fc38.i686.rpm: Already downloaded [SKIPPED] efi-srpm-macros-5-7.fc38.noarch.rpm: Already downloaded [SKIPPED] elfutils-0.189-2.fc39.i686.rpm: Already downloaded [SKIPPED] elfutils-debuginfod-client-0.189-2.fc39.i686.rpm: Already downloaded [SKIPPED] elfutils-default-yama-scope-0.189-2.fc39.noarch.rpm: Already downloaded [SKIPPED] elfutils-libelf-0.189-2.fc39.i686.rpm: Already downloaded [SKIPPED] elfutils-libs-0.189-2.fc39.i686.rpm: Already downloaded [SKIPPED] fedora-gpg-keys-39-0.1.noarch.rpm: Already downloaded [SKIPPED] fedora-release-39-0.11.noarch.rpm: Already downloaded [SKIPPED] fedora-release-common-39-0.11.noarch.rpm: Already downloaded [SKIPPED] fedora-release-identity-basic-39-0.11.noarch.rpm: Already downloaded [SKIPPED] fedora-repos-39-0.1.noarch.rpm: Already downloaded [SKIPPED] fedora-repos-rawhide-39-0.1.noarch.rpm: Already downloaded [SKIPPED] file-5.44-3.fc39.i686.rpm: Already downloaded [SKIPPED] file-libs-5.44-3.fc39.i686.rpm: Already downloaded [SKIPPED] filesystem-3.18-4.fc39.i686.rpm: Already downloaded [SKIPPED] findutils-4.9.0-4.fc39.i686.rpm: Already downloaded [SKIPPED] fonts-srpm-macros-2.0.5-11.fc38.noarch.rpm: Already downloaded [SKIPPED] fpc-srpm-macros-1.3-7.fc38.noarch.rpm: Already downloaded [SKIPPED] gawk-5.1.1-5.fc38.i686.rpm: Already downloaded [SKIPPED] gdb-minimal-13.1-5.fc39.i686.rpm: Already downloaded [SKIPPED] gdbm-libs-1.23-3.fc38.i686.rpm: Already downloaded [SKIPPED] ghc-srpm-macros-1.6.1-1.fc38.noarch.rpm: Already downloaded [SKIPPED] glibc-2.37.9000-10.fc39.i686.rpm: Already downloaded [SKIPPED] glibc-common-2.37.9000-10.fc39.i686.rpm: Already downloaded [SKIPPED] glibc-gconv-extra-2.37.9000-10.fc39.i686.rpm: Already downloaded [SKIPPED] glibc-minimal-langpack-2.37.9000-10.fc39.i686.rpm: Already downloaded [SKIPPED] gmp-6.2.1-4.fc38.i686.rpm: Already downloaded [SKIPPED] gnat-srpm-macros-6-2.fc38.noarch.rpm: Already downloaded [SKIPPED] go-srpm-macros-3.2.0-3.fc39.noarch.rpm: Already downloaded [SKIPPED] grep-3.9-1.fc39.i686.rpm: Already downloaded [SKIPPED] gzip-1.12-3.fc38.i686.rpm: Already downloaded [SKIPPED] info-7.0.3-1.fc39.i686.rpm: Already downloaded [SKIPPED] jansson-2.13.1-6.fc38.i686.rpm: Already downloaded [SKIPPED] kernel-srpm-macros-1.0-18.fc39.noarch.rpm: Already downloaded [SKIPPED] keyutils-libs-1.6.1-6.fc38.i686.rpm: Already downloaded [SKIPPED] krb5-libs-1.20.1-9.fc39.i686.rpm: Already downloaded [SKIPPED] libacl-2.3.1-7.fc39.i686.rpm: Already downloaded [SKIPPED] libarchive-3.6.1-5.fc39.i686.rpm: Already downloaded [SKIPPED] libattr-2.5.1-7.fc39.i686.rpm: Already downloaded [SKIPPED] libblkid-2.39-2.fc39.i686.rpm: Already downloaded [SKIPPED] libbrotli-1.0.9-11.fc38.i686.rpm: Already downloaded [SKIPPED] libcap-2.48-6.fc38.i686.rpm: Already downloaded [SKIPPED] libcap-ng-0.8.3-5.fc38.i686.rpm: Already downloaded [SKIPPED] libcom_err-1.46.5-4.fc38.i686.rpm: Already downloaded [SKIPPED] libcurl-8.1.0-1.fc39.i686.rpm: Already downloaded [SKIPPED] libdb-5.3.28-55.fc38.i686.rpm: Already downloaded [SKIPPED] libeconf-0.4.0-5.fc38.i686.rpm: Already downloaded [SKIPPED] libevent-2.1.12-8.fc38.i686.rpm: Already downloaded [SKIPPED] libfdisk-2.39-2.fc39.i686.rpm: Already downloaded [SKIPPED] libffi-3.4.4-2.fc38.i686.rpm: Already downloaded [SKIPPED] libgcc-13.1.1-2.fc39.i686.rpm: Already downloaded [SKIPPED] libgomp-13.1.1-2.fc39.i686.rpm: Already downloaded [SKIPPED] libidn2-2.3.4-2.fc38.i686.rpm: Already downloaded [SKIPPED] libmount-2.39-2.fc39.i686.rpm: Already downloaded [SKIPPED] libnghttp2-1.53.0-1.fc39.i686.rpm: Already downloaded [SKIPPED] libnsl2-2.0.0-5.fc38.i686.rpm: Already downloaded [SKIPPED] libpkgconf-1.9.4-2.fc39.i686.rpm: Already downloaded [SKIPPED] libpsl-0.21.2-2.fc38.i686.rpm: Already downloaded [SKIPPED] libpwquality-1.4.5-3.fc38.i686.rpm: Already downloaded [SKIPPED] libselinux-3.5-1.fc39.i686.rpm: Already downloaded [SKIPPED] libsemanage-3.5-2.fc39.i686.rpm: Already downloaded [SKIPPED] libsepol-3.5-1.fc39.i686.rpm: Already downloaded [SKIPPED] libsigsegv-2.14-4.fc38.i686.rpm: Already downloaded [SKIPPED] libsmartcols-2.39-2.fc39.i686.rpm: Already downloaded [SKIPPED] libssh-0.10.5-1.fc39.i686.rpm: Already downloaded [SKIPPED] libssh-config-0.10.5-1.fc39.noarch.rpm: Already downloaded [SKIPPED] libstdc++-13.1.1-2.fc39.i686.rpm: Already downloaded [SKIPPED] libtasn1-4.19.0-2.fc38.i686.rpm: Already downloaded [SKIPPED] libtirpc-1.3.3-1.rc1.fc39.i686.rpm: Already downloaded [SKIPPED] libunistring1.0-1.0-1.fc38.i686.rpm: Already downloaded [SKIPPED] libutempter-1.2.1-9.fc39.i686.rpm: Already downloaded [SKIPPED] libuuid-2.39-2.fc39.i686.rpm: Already downloaded [SKIPPED] libverto-0.3.2-5.fc38.i686.rpm: Already downloaded [SKIPPED] libxcrypt-4.4.33-7.fc39.i686.rpm: Already downloaded [SKIPPED] libxml2-2.10.4-1.fc39.i686.rpm: Already downloaded [SKIPPED] libzstd-1.5.5-1.fc39.i686.rpm: Already downloaded [SKIPPED] lua-libs-5.4.4-9.fc39.i686.rpm: Already downloaded [SKIPPED] lua-srpm-macros-1-8.fc38.noarch.rpm: Already downloaded [SKIPPED] lz4-libs-1.9.4-3.fc39.i686.rpm: Already downloaded [SKIPPED] mpfr-4.1.1-3.fc38.i686.rpm: Already downloaded [SKIPPED] ncurses-base-6.4-3.20230114.fc38.noarch.rpm: Already downloaded [SKIPPED] ncurses-libs-6.4-3.20230114.fc38.i686.rpm: Already downloaded [SKIPPED] ocaml-srpm-macros-7-3.fc38.noarch.rpm: Already downloaded [SKIPPED] openblas-srpm-macros-2-13.fc38.noarch.rpm: Already downloaded [SKIPPED] openldap-2.6.4-2.fc39.i686.rpm: Already downloaded [SKIPPED] openssl-libs-3.0.8-2.fc39.i686.rpm: Already downloaded [SKIPPED] p11-kit-0.24.1-6.fc38.i686.rpm: Already downloaded [SKIPPED] p11-kit-trust-0.24.1-6.fc38.i686.rpm: Already downloaded [SKIPPED] package-notes-srpm-macros-0.5-7.fc38.noarch.rpm: Already downloaded [SKIPPED] pam-1.5.2-19.fc39.i686.rpm: Already downloaded [SKIPPED] pam-libs-1.5.2-19.fc39.i686.rpm: Already downloaded [SKIPPED] patch-2.7.6-21.fc39.i686.rpm: Already downloaded [SKIPPED] pcre2-10.42-1.fc38.1.i686.rpm: Already downloaded [SKIPPED] pcre2-syntax-10.42-1.fc38.1.noarch.rpm: Already downloaded [SKIPPED] perl-srpm-macros-1-48.fc38.noarch.rpm: Already downloaded [SKIPPED] pkgconf-1.9.4-2.fc39.i686.rpm: Already downloaded [SKIPPED] pkgconf-m4-1.9.4-2.fc39.noarch.rpm: Already downloaded [SKIPPED] pkgconf-pkg-config-1.9.4-2.fc39.i686.rpm: Already downloaded [SKIPPED] popt-1.19-2.fc38.i686.rpm: Already downloaded [SKIPPED] publicsuffix-list-dafsa-20230318-1.fc39.noarch.rpm: Already downloaded [SKIPPED] pyproject-srpm-macros-1.8.0-1.fc39.noarch.rpm: Already downloaded [SKIPPED] python-srpm-macros-3.11-10.fc39.noarch.rpm: Already downloaded [SKIPPED] qt5-srpm-macros-5.15.9-1.fc39.noarch.rpm: Already downloaded [SKIPPED] readline-8.2-3.fc38.i686.rpm: Already downloaded [SKIPPED] redhat-rpm-config-254-1.fc39.noarch.rpm: Already downloaded [SKIPPED] rpm-4.18.1-3.fc39.i686.rpm: Already downloaded [SKIPPED] rpm-build-4.18.1-3.fc39.i686.rpm: Already downloaded [SKIPPED] rpm-build-libs-4.18.1-3.fc39.i686.rpm: Already downloaded [SKIPPED] rpm-libs-4.18.1-3.fc39.i686.rpm: Already downloaded [SKIPPED] rpm-sequoia-1.4.0-2.fc39.i686.rpm: Already downloaded [SKIPPED] rpmautospec-rpm-macros-0.3.5-1.fc38.noarch.rpm: Already downloaded [SKIPPED] rust-srpm-macros-24-1.fc39.noarch.rpm: Already downloaded [SKIPPED] sed-4.8-12.fc38.i686.rpm: Already downloaded [SKIPPED] setup-2.14.3-3.fc39.noarch.rpm: Already downloaded [SKIPPED] shadow-utils-4.13-6.fc39.i686.rpm: Already downloaded [SKIPPED] sqlite-libs-3.41.2-1.fc39.i686.rpm: Already downloaded [SKIPPED] systemd-libs-253.4-1.fc39.i686.rpm: Already downloaded [SKIPPED] tar-1.34-8.fc39.i686.rpm: Already downloaded [SKIPPED] tzdata-2023c-1.fc39.noarch.rpm: Already downloaded [SKIPPED] unzip-6.0-60.fc38.i686.rpm: Already downloaded [SKIPPED] util-linux-2.39-2.fc39.i686.rpm: Already downloaded [SKIPPED] util-linux-core-2.39-2.fc39.i686.rpm: Already downloaded [SKIPPED] which-2.21-39.fc39.i686.rpm: Already downloaded [SKIPPED] xxhash-libs-0.8.1-4.fc38.i686.rpm: Already downloaded [SKIPPED] xz-5.4.3-1.fc39.i686.rpm: Already downloaded [SKIPPED] xz-libs-5.4.3-1.fc39.i686.rpm: Already downloaded [SKIPPED] zip-3.0-36.fc38.i686.rpm: Already downloaded [SKIPPED] zlib-1.2.13-3.fc38.i686.rpm: Already downloaded [SKIPPED] zstd-1.5.5-1.fc39.i686.rpm: Already downloaded Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-4.fc39.i686 1/1 Preparing : 1/1 Installing : crypto-policies-20230420-1.git3d08ae7.fc39.noarc 1/152 Running scriptlet: crypto-policies-20230420-1.git3d08ae7.fc39.noarc 1/152 Installing : tzdata-2023c-1.fc39.noarch 2/152 Installing : fedora-release-identity-basic-39-0.11.noarch 3/152 Installing : rust-srpm-macros-24-1.fc39.noarch 4/152 Installing : qt5-srpm-macros-5.15.9-1.fc39.noarch 5/152 Installing : pyproject-srpm-macros-1.8.0-1.fc39.noarch 6/152 Installing : publicsuffix-list-dafsa-20230318-1.fc39.noarch 7/152 Installing : pkgconf-m4-1.9.4-2.fc39.noarch 8/152 Installing : perl-srpm-macros-1-48.fc38.noarch 9/152 Installing : pcre2-syntax-10.42-1.fc38.1.noarch 10/152 Installing : package-notes-srpm-macros-0.5-7.fc38.noarch 11/152 Installing : openblas-srpm-macros-2-13.fc38.noarch 12/152 Installing : ocaml-srpm-macros-7-3.fc38.noarch 13/152 Installing : ncurses-base-6.4-3.20230114.fc38.noarch 14/152 Installing : libssh-config-0.10.5-1.fc39.noarch 15/152 Installing : kernel-srpm-macros-1.0-18.fc39.noarch 16/152 Installing : gnat-srpm-macros-6-2.fc38.noarch 17/152 Installing : ghc-srpm-macros-1.6.1-1.fc38.noarch 18/152 Installing : fpc-srpm-macros-1.3-7.fc38.noarch 19/152 Installing : fedora-gpg-keys-39-0.1.noarch 20/152 Installing : fedora-release-39-0.11.noarch 21/152 Installing : fedora-release-common-39-0.11.noarch 22/152 Installing : fedora-repos-rawhide-39-0.1.noarch 23/152 Installing : fedora-repos-39-0.1.noarch 24/152 Installing : setup-2.14.3-3.fc39.noarch 25/152 warning: /etc/hosts created as /etc/hosts.rpmnew Running scriptlet: setup-2.14.3-3.fc39.noarch 25/152 Installing : filesystem-3.18-4.fc39.i686 26/152 Installing : basesystem-11-15.fc38.noarch 27/152 Installing : coreutils-common-9.3-1.fc39.i686 28/152 Installing : ansible-srpm-macros-1-10.fc39.noarch 29/152 Installing : libgcc-13.1.1-2.fc39.i686 30/152 Running scriptlet: libgcc-13.1.1-2.fc39.i686 30/152 Installing : glibc-gconv-extra-2.37.9000-10.fc39.i686 31/152 Running scriptlet: glibc-gconv-extra-2.37.9000-10.fc39.i686 31/152 Installing : glibc-minimal-langpack-2.37.9000-10.fc39.i686 32/152 Installing : glibc-common-2.37.9000-10.fc39.i686 33/152 Running scriptlet: glibc-2.37.9000-10.fc39.i686 34/152 Installing : glibc-2.37.9000-10.fc39.i686 34/152 Running scriptlet: glibc-2.37.9000-10.fc39.i686 34/152 Installing : ncurses-libs-6.4-3.20230114.fc38.i686 35/152 Installing : bash-5.2.15-3.fc38.i686 36/152 Running scriptlet: bash-5.2.15-3.fc38.i686 36/152 Installing : zlib-1.2.13-3.fc38.i686 37/152 Installing : xz-libs-5.4.3-1.fc39.i686 38/152 Installing : bzip2-libs-1.0.8-13.fc38.i686 39/152 Installing : libzstd-1.5.5-1.fc39.i686 40/152 Installing : elfutils-libelf-0.189-2.fc39.i686 41/152 Installing : libstdc++-13.1.1-2.fc39.i686 42/152 Installing : libuuid-2.39-2.fc39.i686 43/152 Installing : popt-1.19-2.fc38.i686 44/152 Installing : libblkid-2.39-2.fc39.i686 45/152 Installing : readline-8.2-3.fc38.i686 46/152 Installing : gmp-1:6.2.1-4.fc38.i686 47/152 Installing : libattr-2.5.1-7.fc39.i686 48/152 Installing : libacl-2.3.1-7.fc39.i686 49/152 Installing : libcap-2.48-6.fc38.i686 50/152 Installing : libxcrypt-4.4.33-7.fc39.i686 51/152 Installing : libeconf-0.4.0-5.fc38.i686 52/152 Installing : lz4-libs-1.9.4-3.fc39.i686 53/152 Installing : systemd-libs-253.4-1.fc39.i686 54/152 Installing : mpfr-4.1.1-3.fc38.i686 55/152 Installing : dwz-0.15-2.fc38.i686 56/152 Installing : unzip-6.0-60.fc38.i686 57/152 Installing : file-libs-5.44-3.fc39.i686 58/152 Installing : file-5.44-3.fc39.i686 59/152 Installing : sqlite-libs-3.41.2-1.fc39.i686 60/152 Installing : alternatives-1.24-1.fc39.i686 61/152 Installing : jansson-2.13.1-6.fc38.i686 62/152 Installing : libcap-ng-0.8.3-5.fc38.i686 63/152 Installing : audit-libs-3.1.1-1.fc39.i686 64/152 Installing : pam-libs-1.5.2-19.fc39.i686 65/152 Installing : libcom_err-1.46.5-4.fc38.i686 66/152 Installing : libsepol-3.5-1.fc39.i686 67/152 Installing : libsmartcols-2.39-2.fc39.i686 68/152 Installing : libunistring1.0-1.0-1.fc38.i686 69/152 Installing : libidn2-2.3.4-2.fc38.i686 70/152 Installing : lua-libs-5.4.4-9.fc39.i686 71/152 Installing : pcre2-10.42-1.fc38.1.i686 72/152 Installing : elfutils-default-yama-scope-0.189-2.fc39.noarch 73/152 Running scriptlet: elfutils-default-yama-scope-0.189-2.fc39.noarch 73/152 Installing : libselinux-3.5-1.fc39.i686 74/152 Installing : sed-4.8-12.fc38.i686 75/152 Installing : grep-3.9-1.fc39.i686 76/152 Installing : findutils-1:4.9.0-4.fc39.i686 77/152 Installing : xz-5.4.3-1.fc39.i686 78/152 Installing : libmount-2.39-2.fc39.i686 79/152 Installing : util-linux-core-2.39-2.fc39.i686 80/152 Installing : libsemanage-3.5-2.fc39.i686 81/152 Installing : shadow-utils-2:4.13-6.fc39.i686 82/152 Running scriptlet: libutempter-1.2.1-9.fc39.i686 83/152 Installing : libutempter-1.2.1-9.fc39.i686 83/152 Installing : tar-2:1.34-8.fc39.i686 84/152 Installing : libpsl-0.21.2-2.fc38.i686 85/152 Installing : zip-3.0-36.fc38.i686 86/152 Installing : zstd-1.5.5-1.fc39.i686 87/152 Installing : libfdisk-2.39-2.fc39.i686 88/152 Installing : bzip2-1.0.8-13.fc38.i686 89/152 Installing : libxml2-2.10.4-1.fc39.i686 90/152 Installing : ed-1.19-2.fc38.i686 91/152 Installing : patch-2.7.6-21.fc39.i686 92/152 Installing : cpio-2.13-14.fc38.i686 93/152 Installing : diffutils-3.9-4.fc39.i686 94/152 Installing : gdbm-libs-1:1.23-3.fc38.i686 95/152 Installing : cyrus-sasl-lib-2.1.28-10.fc39.i686 96/152 Installing : keyutils-libs-1.6.1-6.fc38.i686 97/152 Installing : libbrotli-1.0.9-11.fc38.i686 98/152 Installing : libdb-5.3.28-55.fc38.i686 99/152 Installing : libffi-3.4.4-2.fc38.i686 100/152 Installing : p11-kit-0.24.1-6.fc38.i686 101/152 Installing : libgomp-13.1.1-2.fc39.i686 102/152 Installing : libnghttp2-1.53.0-1.fc39.i686 103/152 Installing : libpkgconf-1.9.4-2.fc39.i686 104/152 Installing : pkgconf-1.9.4-2.fc39.i686 105/152 Installing : pkgconf-pkg-config-1.9.4-2.fc39.i686 106/152 Installing : libsigsegv-2.14-4.fc38.i686 107/152 Installing : gawk-5.1.1-5.fc38.i686 108/152 Installing : libtasn1-4.19.0-2.fc38.i686 109/152 Installing : p11-kit-trust-0.24.1-6.fc38.i686 110/152 Running scriptlet: p11-kit-trust-0.24.1-6.fc38.i686 110/152 Installing : openssl-libs-1:3.0.8-2.fc39.i686 111/152 Installing : coreutils-9.3-1.fc39.i686 112/152 Running scriptlet: ca-certificates-2023.2.60-2.fc38.noarch 113/152 Installing : ca-certificates-2023.2.60-2.fc38.noarch 113/152 Running scriptlet: ca-certificates-2023.2.60-2.fc38.noarch 113/152 Running scriptlet: authselect-libs-1.4.2-2.fc38.i686 114/152 Installing : authselect-libs-1.4.2-2.fc38.i686 114/152 Installing : gzip-1.12-3.fc38.i686 115/152 Installing : rpm-sequoia-1.4.0-2.fc39.i686 116/152 Installing : rpm-libs-4.18.1-3.fc39.i686 117/152 Installing : cracklib-2.9.7-31.fc38.i686 118/152 Installing : libpwquality-1.4.5-3.fc38.i686 119/152 Installing : authselect-1.4.2-2.fc38.i686 120/152 Installing : libarchive-3.6.1-5.fc39.i686 121/152 Installing : libevent-2.1.12-8.fc38.i686 122/152 Installing : openldap-2.6.4-2.fc39.i686 123/152 Installing : libverto-0.3.2-5.fc38.i686 124/152 Installing : krb5-libs-1.20.1-9.fc39.i686 125/152 Installing : libtirpc-1.3.3-1.rc1.fc39.i686 126/152 Installing : libnsl2-2.0.0-5.fc38.i686 127/152 Installing : pam-1.5.2-19.fc39.i686 128/152 Installing : libssh-0.10.5-1.fc39.i686 129/152 Installing : libcurl-8.1.0-1.fc39.i686 130/152 Installing : elfutils-libs-0.189-2.fc39.i686 131/152 Installing : elfutils-debuginfod-client-0.189-2.fc39.i686 132/152 Installing : binutils-gold-2.40-7.fc39.i686 133/152 Installing : binutils-2.40-7.fc39.i686 134/152 Running scriptlet: binutils-2.40-7.fc39.i686 134/152 Installing : elfutils-0.189-2.fc39.i686 135/152 Installing : rpm-build-libs-4.18.1-3.fc39.i686 136/152 Installing : curl-8.1.0-1.fc39.i686 137/152 Running scriptlet: rpm-4.18.1-3.fc39.i686 138/152 Installing : rpm-4.18.1-3.fc39.i686 138/152 Installing : efi-srpm-macros-5-7.fc38.noarch 139/152 Installing : lua-srpm-macros-1-8.fc38.noarch 140/152 Installing : rpmautospec-rpm-macros-0.3.5-1.fc38.noarch 141/152 Installing : fonts-srpm-macros-1:2.0.5-11.fc38.noarch 142/152 Installing : go-srpm-macros-3.2.0-3.fc39.noarch 143/152 Installing : python-srpm-macros-3.11-10.fc39.noarch 144/152 Installing : redhat-rpm-config-254-1.fc39.noarch 145/152 Installing : xxhash-libs-0.8.1-4.fc38.i686 146/152 Installing : gdb-minimal-13.1-5.fc39.i686 147/152 Installing : debugedit-5.0-7.fc38.i686 148/152 Installing : rpm-build-4.18.1-3.fc39.i686 149/152 Installing : util-linux-2.39-2.fc39.i686 150/152 Installing : which-2.21-39.fc39.i686 151/152 Installing : info-7.0.3-1.fc39.i686 152/152 Running scriptlet: filesystem-3.18-4.fc39.i686 152/152 Running scriptlet: ca-certificates-2023.2.60-2.fc38.noarch 152/152 Running scriptlet: authselect-libs-1.4.2-2.fc38.i686 152/152 Running scriptlet: rpm-4.18.1-3.fc39.i686 152/152 Running scriptlet: info-7.0.3-1.fc39.i686 152/152 Verifying : alternatives-1.24-1.fc39.i686 1/152 Verifying : ansible-srpm-macros-1-10.fc39.noarch 2/152 Verifying : audit-libs-3.1.1-1.fc39.i686 3/152 Verifying : authselect-1.4.2-2.fc38.i686 4/152 Verifying : authselect-libs-1.4.2-2.fc38.i686 5/152 Verifying : basesystem-11-15.fc38.noarch 6/152 Verifying : bash-5.2.15-3.fc38.i686 7/152 Verifying : binutils-2.40-7.fc39.i686 8/152 Verifying : binutils-gold-2.40-7.fc39.i686 9/152 Verifying : bzip2-1.0.8-13.fc38.i686 10/152 Verifying : bzip2-libs-1.0.8-13.fc38.i686 11/152 Verifying : ca-certificates-2023.2.60-2.fc38.noarch 12/152 Verifying : coreutils-9.3-1.fc39.i686 13/152 Verifying : coreutils-common-9.3-1.fc39.i686 14/152 Verifying : cpio-2.13-14.fc38.i686 15/152 Verifying : cracklib-2.9.7-31.fc38.i686 16/152 Verifying : crypto-policies-20230420-1.git3d08ae7.fc39.noarc 17/152 Verifying : curl-8.1.0-1.fc39.i686 18/152 Verifying : cyrus-sasl-lib-2.1.28-10.fc39.i686 19/152 Verifying : debugedit-5.0-7.fc38.i686 20/152 Verifying : diffutils-3.9-4.fc39.i686 21/152 Verifying : dwz-0.15-2.fc38.i686 22/152 Verifying : ed-1.19-2.fc38.i686 23/152 Verifying : efi-srpm-macros-5-7.fc38.noarch 24/152 Verifying : elfutils-0.189-2.fc39.i686 25/152 Verifying : elfutils-debuginfod-client-0.189-2.fc39.i686 26/152 Verifying : elfutils-default-yama-scope-0.189-2.fc39.noarch 27/152 Verifying : elfutils-libelf-0.189-2.fc39.i686 28/152 Verifying : elfutils-libs-0.189-2.fc39.i686 29/152 Verifying : fedora-gpg-keys-39-0.1.noarch 30/152 Verifying : fedora-release-39-0.11.noarch 31/152 Verifying : fedora-release-common-39-0.11.noarch 32/152 Verifying : fedora-release-identity-basic-39-0.11.noarch 33/152 Verifying : fedora-repos-39-0.1.noarch 34/152 Verifying : fedora-repos-rawhide-39-0.1.noarch 35/152 Verifying : file-5.44-3.fc39.i686 36/152 Verifying : file-libs-5.44-3.fc39.i686 37/152 Verifying : filesystem-3.18-4.fc39.i686 38/152 Verifying : findutils-1:4.9.0-4.fc39.i686 39/152 Verifying : fonts-srpm-macros-1:2.0.5-11.fc38.noarch 40/152 Verifying : fpc-srpm-macros-1.3-7.fc38.noarch 41/152 Verifying : gawk-5.1.1-5.fc38.i686 42/152 Verifying : gdb-minimal-13.1-5.fc39.i686 43/152 Verifying : gdbm-libs-1:1.23-3.fc38.i686 44/152 Verifying : ghc-srpm-macros-1.6.1-1.fc38.noarch 45/152 Verifying : glibc-2.37.9000-10.fc39.i686 46/152 Verifying : glibc-common-2.37.9000-10.fc39.i686 47/152 Verifying : glibc-gconv-extra-2.37.9000-10.fc39.i686 48/152 Verifying : glibc-minimal-langpack-2.37.9000-10.fc39.i686 49/152 Verifying : gmp-1:6.2.1-4.fc38.i686 50/152 Verifying : gnat-srpm-macros-6-2.fc38.noarch 51/152 Verifying : go-srpm-macros-3.2.0-3.fc39.noarch 52/152 Verifying : grep-3.9-1.fc39.i686 53/152 Verifying : gzip-1.12-3.fc38.i686 54/152 Verifying : info-7.0.3-1.fc39.i686 55/152 Verifying : jansson-2.13.1-6.fc38.i686 56/152 Verifying : kernel-srpm-macros-1.0-18.fc39.noarch 57/152 Verifying : keyutils-libs-1.6.1-6.fc38.i686 58/152 Verifying : krb5-libs-1.20.1-9.fc39.i686 59/152 Verifying : libacl-2.3.1-7.fc39.i686 60/152 Verifying : libarchive-3.6.1-5.fc39.i686 61/152 Verifying : libattr-2.5.1-7.fc39.i686 62/152 Verifying : libblkid-2.39-2.fc39.i686 63/152 Verifying : libbrotli-1.0.9-11.fc38.i686 64/152 Verifying : libcap-2.48-6.fc38.i686 65/152 Verifying : libcap-ng-0.8.3-5.fc38.i686 66/152 Verifying : libcom_err-1.46.5-4.fc38.i686 67/152 Verifying : libcurl-8.1.0-1.fc39.i686 68/152 Verifying : libdb-5.3.28-55.fc38.i686 69/152 Verifying : libeconf-0.4.0-5.fc38.i686 70/152 Verifying : libevent-2.1.12-8.fc38.i686 71/152 Verifying : libfdisk-2.39-2.fc39.i686 72/152 Verifying : libffi-3.4.4-2.fc38.i686 73/152 Verifying : libgcc-13.1.1-2.fc39.i686 74/152 Verifying : libgomp-13.1.1-2.fc39.i686 75/152 Verifying : libidn2-2.3.4-2.fc38.i686 76/152 Verifying : libmount-2.39-2.fc39.i686 77/152 Verifying : libnghttp2-1.53.0-1.fc39.i686 78/152 Verifying : libnsl2-2.0.0-5.fc38.i686 79/152 Verifying : libpkgconf-1.9.4-2.fc39.i686 80/152 Verifying : libpsl-0.21.2-2.fc38.i686 81/152 Verifying : libpwquality-1.4.5-3.fc38.i686 82/152 Verifying : libselinux-3.5-1.fc39.i686 83/152 Verifying : libsemanage-3.5-2.fc39.i686 84/152 Verifying : libsepol-3.5-1.fc39.i686 85/152 Verifying : libsigsegv-2.14-4.fc38.i686 86/152 Verifying : libsmartcols-2.39-2.fc39.i686 87/152 Verifying : libssh-0.10.5-1.fc39.i686 88/152 Verifying : libssh-config-0.10.5-1.fc39.noarch 89/152 Verifying : libstdc++-13.1.1-2.fc39.i686 90/152 Verifying : libtasn1-4.19.0-2.fc38.i686 91/152 Verifying : libtirpc-1.3.3-1.rc1.fc39.i686 92/152 Verifying : libunistring1.0-1.0-1.fc38.i686 93/152 Verifying : libutempter-1.2.1-9.fc39.i686 94/152 Verifying : libuuid-2.39-2.fc39.i686 95/152 Verifying : libverto-0.3.2-5.fc38.i686 96/152 Verifying : libxcrypt-4.4.33-7.fc39.i686 97/152 Verifying : libxml2-2.10.4-1.fc39.i686 98/152 Verifying : libzstd-1.5.5-1.fc39.i686 99/152 Verifying : lua-libs-5.4.4-9.fc39.i686 100/152 Verifying : lua-srpm-macros-1-8.fc38.noarch 101/152 Verifying : lz4-libs-1.9.4-3.fc39.i686 102/152 Verifying : mpfr-4.1.1-3.fc38.i686 103/152 Verifying : ncurses-base-6.4-3.20230114.fc38.noarch 104/152 Verifying : ncurses-libs-6.4-3.20230114.fc38.i686 105/152 Verifying : ocaml-srpm-macros-7-3.fc38.noarch 106/152 Verifying : openblas-srpm-macros-2-13.fc38.noarch 107/152 Verifying : openldap-2.6.4-2.fc39.i686 108/152 Verifying : openssl-libs-1:3.0.8-2.fc39.i686 109/152 Verifying : p11-kit-0.24.1-6.fc38.i686 110/152 Verifying : p11-kit-trust-0.24.1-6.fc38.i686 111/152 Verifying : package-notes-srpm-macros-0.5-7.fc38.noarch 112/152 Verifying : pam-1.5.2-19.fc39.i686 113/152 Verifying : pam-libs-1.5.2-19.fc39.i686 114/152 Verifying : patch-2.7.6-21.fc39.i686 115/152 Verifying : pcre2-10.42-1.fc38.1.i686 116/152 Verifying : pcre2-syntax-10.42-1.fc38.1.noarch 117/152 Verifying : perl-srpm-macros-1-48.fc38.noarch 118/152 Verifying : pkgconf-1.9.4-2.fc39.i686 119/152 Verifying : pkgconf-m4-1.9.4-2.fc39.noarch 120/152 Verifying : pkgconf-pkg-config-1.9.4-2.fc39.i686 121/152 Verifying : popt-1.19-2.fc38.i686 122/152 Verifying : publicsuffix-list-dafsa-20230318-1.fc39.noarch 123/152 Verifying : pyproject-srpm-macros-1.8.0-1.fc39.noarch 124/152 Verifying : python-srpm-macros-3.11-10.fc39.noarch 125/152 Verifying : qt5-srpm-macros-5.15.9-1.fc39.noarch 126/152 Verifying : readline-8.2-3.fc38.i686 127/152 Verifying : redhat-rpm-config-254-1.fc39.noarch 128/152 Verifying : rpm-4.18.1-3.fc39.i686 129/152 Verifying : rpm-build-4.18.1-3.fc39.i686 130/152 Verifying : rpm-build-libs-4.18.1-3.fc39.i686 131/152 Verifying : rpm-libs-4.18.1-3.fc39.i686 132/152 Verifying : rpm-sequoia-1.4.0-2.fc39.i686 133/152 Verifying : rpmautospec-rpm-macros-0.3.5-1.fc38.noarch 134/152 Verifying : rust-srpm-macros-24-1.fc39.noarch 135/152 Verifying : sed-4.8-12.fc38.i686 136/152 Verifying : setup-2.14.3-3.fc39.noarch 137/152 Verifying : shadow-utils-2:4.13-6.fc39.i686 138/152 Verifying : sqlite-libs-3.41.2-1.fc39.i686 139/152 Verifying : systemd-libs-253.4-1.fc39.i686 140/152 Verifying : tar-2:1.34-8.fc39.i686 141/152 Verifying : tzdata-2023c-1.fc39.noarch 142/152 Verifying : unzip-6.0-60.fc38.i686 143/152 Verifying : util-linux-2.39-2.fc39.i686 144/152 Verifying : util-linux-core-2.39-2.fc39.i686 145/152 Verifying : which-2.21-39.fc39.i686 146/152 Verifying : xxhash-libs-0.8.1-4.fc38.i686 147/152 Verifying : xz-5.4.3-1.fc39.i686 148/152 Verifying : xz-libs-5.4.3-1.fc39.i686 149/152 Verifying : zip-3.0-36.fc38.i686 150/152 Verifying : zlib-1.2.13-3.fc38.i686 151/152 Verifying : zstd-1.5.5-1.fc39.i686 152/152 Installed: alternatives-1.24-1.fc39.i686 ansible-srpm-macros-1-10.fc39.noarch audit-libs-3.1.1-1.fc39.i686 authselect-1.4.2-2.fc38.i686 authselect-libs-1.4.2-2.fc38.i686 basesystem-11-15.fc38.noarch bash-5.2.15-3.fc38.i686 binutils-2.40-7.fc39.i686 binutils-gold-2.40-7.fc39.i686 bzip2-1.0.8-13.fc38.i686 bzip2-libs-1.0.8-13.fc38.i686 ca-certificates-2023.2.60-2.fc38.noarch coreutils-9.3-1.fc39.i686 coreutils-common-9.3-1.fc39.i686 cpio-2.13-14.fc38.i686 cracklib-2.9.7-31.fc38.i686 crypto-policies-20230420-1.git3d08ae7.fc39.noarch curl-8.1.0-1.fc39.i686 cyrus-sasl-lib-2.1.28-10.fc39.i686 debugedit-5.0-7.fc38.i686 diffutils-3.9-4.fc39.i686 dwz-0.15-2.fc38.i686 ed-1.19-2.fc38.i686 efi-srpm-macros-5-7.fc38.noarch elfutils-0.189-2.fc39.i686 elfutils-debuginfod-client-0.189-2.fc39.i686 elfutils-default-yama-scope-0.189-2.fc39.noarch elfutils-libelf-0.189-2.fc39.i686 elfutils-libs-0.189-2.fc39.i686 fedora-gpg-keys-39-0.1.noarch fedora-release-39-0.11.noarch fedora-release-common-39-0.11.noarch fedora-release-identity-basic-39-0.11.noarch fedora-repos-39-0.1.noarch fedora-repos-rawhide-39-0.1.noarch file-5.44-3.fc39.i686 file-libs-5.44-3.fc39.i686 filesystem-3.18-4.fc39.i686 findutils-1:4.9.0-4.fc39.i686 fonts-srpm-macros-1:2.0.5-11.fc38.noarch fpc-srpm-macros-1.3-7.fc38.noarch gawk-5.1.1-5.fc38.i686 gdb-minimal-13.1-5.fc39.i686 gdbm-libs-1:1.23-3.fc38.i686 ghc-srpm-macros-1.6.1-1.fc38.noarch glibc-2.37.9000-10.fc39.i686 glibc-common-2.37.9000-10.fc39.i686 glibc-gconv-extra-2.37.9000-10.fc39.i686 glibc-minimal-langpack-2.37.9000-10.fc39.i686 gmp-1:6.2.1-4.fc38.i686 gnat-srpm-macros-6-2.fc38.noarch go-srpm-macros-3.2.0-3.fc39.noarch grep-3.9-1.fc39.i686 gzip-1.12-3.fc38.i686 info-7.0.3-1.fc39.i686 jansson-2.13.1-6.fc38.i686 kernel-srpm-macros-1.0-18.fc39.noarch keyutils-libs-1.6.1-6.fc38.i686 krb5-libs-1.20.1-9.fc39.i686 libacl-2.3.1-7.fc39.i686 libarchive-3.6.1-5.fc39.i686 libattr-2.5.1-7.fc39.i686 libblkid-2.39-2.fc39.i686 libbrotli-1.0.9-11.fc38.i686 libcap-2.48-6.fc38.i686 libcap-ng-0.8.3-5.fc38.i686 libcom_err-1.46.5-4.fc38.i686 libcurl-8.1.0-1.fc39.i686 libdb-5.3.28-55.fc38.i686 libeconf-0.4.0-5.fc38.i686 libevent-2.1.12-8.fc38.i686 libfdisk-2.39-2.fc39.i686 libffi-3.4.4-2.fc38.i686 libgcc-13.1.1-2.fc39.i686 libgomp-13.1.1-2.fc39.i686 libidn2-2.3.4-2.fc38.i686 libmount-2.39-2.fc39.i686 libnghttp2-1.53.0-1.fc39.i686 libnsl2-2.0.0-5.fc38.i686 libpkgconf-1.9.4-2.fc39.i686 libpsl-0.21.2-2.fc38.i686 libpwquality-1.4.5-3.fc38.i686 libselinux-3.5-1.fc39.i686 libsemanage-3.5-2.fc39.i686 libsepol-3.5-1.fc39.i686 libsigsegv-2.14-4.fc38.i686 libsmartcols-2.39-2.fc39.i686 libssh-0.10.5-1.fc39.i686 libssh-config-0.10.5-1.fc39.noarch libstdc++-13.1.1-2.fc39.i686 libtasn1-4.19.0-2.fc38.i686 libtirpc-1.3.3-1.rc1.fc39.i686 libunistring1.0-1.0-1.fc38.i686 libutempter-1.2.1-9.fc39.i686 libuuid-2.39-2.fc39.i686 libverto-0.3.2-5.fc38.i686 libxcrypt-4.4.33-7.fc39.i686 libxml2-2.10.4-1.fc39.i686 libzstd-1.5.5-1.fc39.i686 lua-libs-5.4.4-9.fc39.i686 lua-srpm-macros-1-8.fc38.noarch lz4-libs-1.9.4-3.fc39.i686 mpfr-4.1.1-3.fc38.i686 ncurses-base-6.4-3.20230114.fc38.noarch ncurses-libs-6.4-3.20230114.fc38.i686 ocaml-srpm-macros-7-3.fc38.noarch openblas-srpm-macros-2-13.fc38.noarch openldap-2.6.4-2.fc39.i686 openssl-libs-1:3.0.8-2.fc39.i686 p11-kit-0.24.1-6.fc38.i686 p11-kit-trust-0.24.1-6.fc38.i686 package-notes-srpm-macros-0.5-7.fc38.noarch pam-1.5.2-19.fc39.i686 pam-libs-1.5.2-19.fc39.i686 patch-2.7.6-21.fc39.i686 pcre2-10.42-1.fc38.1.i686 pcre2-syntax-10.42-1.fc38.1.noarch perl-srpm-macros-1-48.fc38.noarch pkgconf-1.9.4-2.fc39.i686 pkgconf-m4-1.9.4-2.fc39.noarch pkgconf-pkg-config-1.9.4-2.fc39.i686 popt-1.19-2.fc38.i686 publicsuffix-list-dafsa-20230318-1.fc39.noarch pyproject-srpm-macros-1.8.0-1.fc39.noarch python-srpm-macros-3.11-10.fc39.noarch qt5-srpm-macros-5.15.9-1.fc39.noarch readline-8.2-3.fc38.i686 redhat-rpm-config-254-1.fc39.noarch rpm-4.18.1-3.fc39.i686 rpm-build-4.18.1-3.fc39.i686 rpm-build-libs-4.18.1-3.fc39.i686 rpm-libs-4.18.1-3.fc39.i686 rpm-sequoia-1.4.0-2.fc39.i686 rpmautospec-rpm-macros-0.3.5-1.fc38.noarch rust-srpm-macros-24-1.fc39.noarch sed-4.8-12.fc38.i686 setup-2.14.3-3.fc39.noarch shadow-utils-2:4.13-6.fc39.i686 sqlite-libs-3.41.2-1.fc39.i686 systemd-libs-253.4-1.fc39.i686 tar-2:1.34-8.fc39.i686 tzdata-2023c-1.fc39.noarch unzip-6.0-60.fc38.i686 util-linux-2.39-2.fc39.i686 util-linux-core-2.39-2.fc39.i686 which-2.21-39.fc39.i686 xxhash-libs-0.8.1-4.fc38.i686 xz-5.4.3-1.fc39.i686 xz-libs-5.4.3-1.fc39.i686 zip-3.0-36.fc38.i686 zlib-1.2.13-3.fc38.i686 zstd-1.5.5-1.fc39.i686 Complete! Finish: dnf install Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: binutils-gold-2.40-7.fc39.i686 publicsuffix-list-dafsa-20230318-1.fc39.noarch pkgconf-1.9.4-2.fc39.i686 ghc-srpm-macros-1.6.1-1.fc38.noarch filesystem-3.18-4.fc39.i686 libidn2-2.3.4-2.fc38.i686 python-srpm-macros-3.11-10.fc39.noarch dwz-0.15-2.fc38.i686 readline-8.2-3.fc38.i686 sed-4.8-12.fc38.i686 zlib-1.2.13-3.fc38.i686 libcurl-8.1.0-1.fc39.i686 cpio-2.13-14.fc38.i686 libuuid-2.39-2.fc39.i686 elfutils-debuginfod-client-0.189-2.fc39.i686 zstd-1.5.5-1.fc39.i686 ncurses-base-6.4-3.20230114.fc38.noarch pcre2-syntax-10.42-1.fc38.1.noarch ca-certificates-2023.2.60-2.fc38.noarch libgomp-13.1.1-2.fc39.i686 libdb-5.3.28-55.fc38.i686 crypto-policies-20230420-1.git3d08ae7.fc39.noarch util-linux-2.39-2.fc39.i686 libsemanage-3.5-2.fc39.i686 tzdata-2023c-1.fc39.noarch libpwquality-1.4.5-3.fc38.i686 setup-2.14.3-3.fc39.noarch libcap-2.48-6.fc38.i686 libmount-2.39-2.fc39.i686 gnat-srpm-macros-6-2.fc38.noarch libpsl-0.21.2-2.fc38.i686 ocaml-srpm-macros-7-3.fc38.noarch libevent-2.1.12-8.fc38.i686 rpm-4.18.1-3.fc39.i686 rust-srpm-macros-24-1.fc39.noarch cyrus-sasl-lib-2.1.28-10.fc39.i686 krb5-libs-1.20.1-9.fc39.i686 pcre2-10.42-1.fc38.1.i686 libarchive-3.6.1-5.fc39.i686 gawk-5.1.1-5.fc38.i686 libtasn1-4.19.0-2.fc38.i686 bash-5.2.15-3.fc38.i686 ansible-srpm-macros-1-10.fc39.noarch grep-3.9-1.fc39.i686 lz4-libs-1.9.4-3.fc39.i686 bzip2-libs-1.0.8-13.fc38.i686 keyutils-libs-1.6.1-6.fc38.i686 libunistring1.0-1.0-1.fc38.i686 libnghttp2-1.53.0-1.fc39.i686 systemd-libs-253.4-1.fc39.i686 rpm-libs-4.18.1-3.fc39.i686 libselinux-3.5-1.fc39.i686 libblkid-2.39-2.fc39.i686 audit-libs-3.1.1-1.fc39.i686 package-notes-srpm-macros-0.5-7.fc38.noarch redhat-rpm-config-254-1.fc39.noarch xz-libs-5.4.3-1.fc39.i686 libfdisk-2.39-2.fc39.i686 fedora-gpg-keys-39-0.1.noarch tar-1.34-8.fc39.i686 coreutils-common-9.3-1.fc39.i686 libeconf-0.4.0-5.fc38.i686 authselect-libs-1.4.2-2.fc38.i686 ed-1.19-2.fc38.i686 patch-2.7.6-21.fc39.i686 zip-3.0-36.fc38.i686 libxcrypt-4.4.33-7.fc39.i686 libffi-3.4.4-2.fc38.i686 gdb-minimal-13.1-5.fc39.i686 gzip-1.12-3.fc38.i686 alternatives-1.24-1.fc39.i686 libverto-0.3.2-5.fc38.i686 fedora-release-common-39-0.11.noarch xxhash-libs-0.8.1-4.fc38.i686 fonts-srpm-macros-2.0.5-11.fc38.noarch fedora-release-identity-basic-39-0.11.noarch libsmartcols-2.39-2.fc39.i686 mpfr-4.1.1-3.fc38.i686 efi-srpm-macros-5-7.fc38.noarch curl-8.1.0-1.fc39.i686 openblas-srpm-macros-2-13.fc38.noarch libnsl2-2.0.0-5.fc38.i686 libutempter-1.2.1-9.fc39.i686 go-srpm-macros-3.2.0-3.fc39.noarch pam-libs-1.5.2-19.fc39.i686 file-5.44-3.fc39.i686 openssl-libs-3.0.8-2.fc39.i686 glibc-gconv-extra-2.37.9000-10.fc39.i686 glibc-2.37.9000-10.fc39.i686 libattr-2.5.1-7.fc39.i686 libbrotli-1.0.9-11.fc38.i686 libstdc++-13.1.1-2.fc39.i686 glibc-minimal-langpack-2.37.9000-10.fc39.i686 util-linux-core-2.39-2.fc39.i686 libsepol-3.5-1.fc39.i686 ncurses-libs-6.4-3.20230114.fc38.i686 qt5-srpm-macros-5.15.9-1.fc39.noarch elfutils-0.189-2.fc39.i686 rpm-build-libs-4.18.1-3.fc39.i686 libpkgconf-1.9.4-2.fc39.i686 perl-srpm-macros-1-48.fc38.noarch gdbm-libs-1.23-3.fc38.i686 lua-libs-5.4.4-9.fc39.i686 pkgconf-m4-1.9.4-2.fc39.noarch shadow-utils-4.13-6.fc39.i686 elfutils-default-yama-scope-0.189-2.fc39.noarch libsigsegv-2.14-4.fc38.i686 pkgconf-pkg-config-1.9.4-2.fc39.i686 fedora-repos-rawhide-39-0.1.noarch diffutils-3.9-4.fc39.i686 rpm-build-4.18.1-3.fc39.i686 file-libs-5.44-3.fc39.i686 p11-kit-trust-0.24.1-6.fc38.i686 libcap-ng-0.8.3-5.fc38.i686 libxml2-2.10.4-1.fc39.i686 which-2.21-39.fc39.i686 elfutils-libelf-0.189-2.fc39.i686 libacl-2.3.1-7.fc39.i686 libgcc-13.1.1-2.fc39.i686 findutils-4.9.0-4.fc39.i686 kernel-srpm-macros-1.0-18.fc39.noarch authselect-1.4.2-2.fc38.i686 openldap-2.6.4-2.fc39.i686 pam-1.5.2-19.fc39.i686 p11-kit-0.24.1-6.fc38.i686 unzip-6.0-60.fc38.i686 jansson-2.13.1-6.fc38.i686 coreutils-9.3-1.fc39.i686 xz-5.4.3-1.fc39.i686 gmp-6.2.1-4.fc38.i686 fedora-repos-39-0.1.noarch debugedit-5.0-7.fc38.i686 glibc-common-2.37.9000-10.fc39.i686 elfutils-libs-0.189-2.fc39.i686 rpmautospec-rpm-macros-0.3.5-1.fc38.noarch lua-srpm-macros-1-8.fc38.noarch pyproject-srpm-macros-1.8.0-1.fc39.noarch binutils-2.40-7.fc39.i686 fedora-release-39-0.11.noarch libssh-0.10.5-1.fc39.i686 cracklib-2.9.7-31.fc38.i686 sqlite-libs-3.41.2-1.fc39.i686 libtirpc-1.3.3-1.rc1.fc39.i686 info-7.0.3-1.fc39.i686 libssh-config-0.10.5-1.fc39.noarch basesystem-11-15.fc38.noarch bzip2-1.0.8-13.fc38.i686 rpm-sequoia-1.4.0-2.fc39.i686 libcom_err-1.46.5-4.fc38.i686 libzstd-1.5.5-1.fc39.i686 popt-1.19-2.fc38.i686 fpc-srpm-macros-1.3-7.fc38.noarch Start: buildsrpm Start: rpmbuild -bs warning: %patchN is deprecated (6 usages found), use %patch N (or %patch -P N) Building target platforms: i686 Building for target i686 setting SOURCE_DATE_EPOCH=1674259200 Wrote: /builddir/build/SRPMS/smoldyn-2.67.3-4.fc39.src.rpm RPM build warnings: %patchN is deprecated (6 usages found), use %patch N (or %patch -P N) Finish: rpmbuild -bs cp: ‘var/lib/mock/fedora-rawhide-i686-1684437149.692264/root/var/log’: No such file or directory INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-i686-1684437149.692264/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-i686-1684437149.692264/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-i686-1684437149.692264/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-w777_is2/smoldyn/smoldyn.spec) Config(child) 0 minutes 42 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running (timeout=18000): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/smoldyn-2.67.3-4.fc39.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1684437149.692264 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 3.5 starting (python version = 3.11.0, NVR = mock-3.5-1.fc37)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/results/smoldyn-2.67.3-4.fc39.src.rpm) Config(fedora-rawhide-i686) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-i686-bootstrap-1684437149.692264/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-i686-bootstrap-1684437149.692264/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.5 INFO: Mock Version: 3.5 Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-i686-1684437149.692264/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.5 INFO: Mock Version: 3.5 Start: dnf update No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 37 kB/s | 1.5 kB 00:00 local 93 kB/s | 3.8 kB 00:00 Dependencies resolved. Nothing to do. Complete! Finish: dnf update Finish: chroot init Start: build phase for smoldyn-2.67.3-4.fc39.src.rpm Start: build setup for smoldyn-2.67.3-4.fc39.src.rpm warning: %patchN is deprecated (6 usages found), use %patch N (or %patch -P N) Building target platforms: i686 Building for target i686 setting SOURCE_DATE_EPOCH=1674259200 Wrote: /builddir/build/SRPMS/smoldyn-2.67.3-4.fc39.src.rpm RPM build warnings: %patchN is deprecated (6 usages found), use %patch N (or %patch -P N) No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 41 kB/s | 1.5 kB 00:00 local 95 kB/s | 3.8 kB 00:00 Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing: boost-devel i686 1.81.0-1.fc39 local 12 M cmake i686 3.26.3-3.fc39 local 7.4 M freeglut-devel i686 3.4.0-3.fc39 local 891 k gcc i686 13.1.1-2.fc39 local 34 M gcc-c++ i686 13.1.1-2.fc39 local 13 M libXi-devel i686 1.8.1-1.fc39 local 103 k libXmu-devel i686 1.1.4-2.fc38 local 22 k libglvnd-devel i686 1:1.6.0-2.fc38 local 157 k libtiff-devel i686 4.5.0-1.fc39 copr_base 240 k make i686 1:4.4.1-1.fc39 local 588 k perl-macros noarch 4:5.36.1-497.fc39 local 13 k pybind11-devel i686 2.10.4-1.fc39 local 164 k python3-devel i686 3.11.3-1.fc39 local 235 k python3-flaky noarch 3.7.0-10.fc38 local 40 k python3-matplotlib i686 3.7.1-1.fc39 local 4.2 M python3-setuptools noarch 67.7.2-2.fc39 local 1.4 M python3-wheel noarch 1:0.40.0-1.fc39 local 150 k xorg-x11-server-Xvfb i686 1.20.14-23.fc39 local 950 k zlib-devel i686 1.2.13-3.fc38 local 45 k Installing dependencies: annobin-docs noarch 12.10-1.fc39 local 95 k annobin-plugin-gcc i686 12.10-1.fc39 local 893 k boost i686 1.81.0-1.fc39 local 14 k boost-atomic i686 1.81.0-1.fc39 local 20 k boost-chrono i686 1.81.0-1.fc39 local 27 k boost-container i686 1.81.0-1.fc39 local 41 k boost-context i686 1.81.0-1.fc39 local 17 k boost-contract i686 1.81.0-1.fc39 local 48 k boost-coroutine i686 1.81.0-1.fc39 local 21 k boost-date-time i686 1.81.0-1.fc39 local 16 k boost-fiber i686 1.81.0-1.fc39 local 45 k boost-filesystem i686 1.81.0-1.fc39 local 73 k boost-graph i686 1.81.0-1.fc39 local 158 k boost-iostreams i686 1.81.0-1.fc39 local 45 k boost-json i686 1.81.0-1.fc39 local 123 k boost-locale i686 1.81.0-1.fc39 local 243 k boost-log i686 1.81.0-1.fc39 local 531 k boost-math i686 1.81.0-1.fc39 local 219 k boost-nowide i686 1.81.0-1.fc39 local 21 k boost-numpy3 i686 1.81.0-1.fc39 local 31 k boost-program-options i686 1.81.0-1.fc39 local 117 k boost-python3 i686 1.81.0-1.fc39 local 104 k boost-random i686 1.81.0-1.fc39 local 25 k boost-regex i686 1.81.0-1.fc39 local 116 k boost-serialization i686 1.81.0-1.fc39 local 145 k boost-stacktrace i686 1.81.0-1.fc39 local 32 k boost-system i686 1.81.0-1.fc39 local 16 k boost-test i686 1.81.0-1.fc39 local 256 k boost-thread i686 1.81.0-1.fc39 local 62 k boost-timer i686 1.81.0-1.fc39 local 25 k boost-type_erasure i686 1.81.0-1.fc39 local 35 k boost-wave i686 1.81.0-1.fc39 local 230 k cairo i686 1.17.8-4.fc39 local 748 k cmake-data noarch 3.26.3-3.fc39 local 1.7 M cmake-filesystem i686 3.26.3-3.fc39 local 17 k cmake-rpm-macros noarch 3.26.3-3.fc39 local 16 k cpp i686 13.1.1-2.fc39 local 11 M dejavu-sans-fonts noarch 2.37-20.fc38 local 1.3 M emacs-filesystem noarch 1:28.2-6.fc39 copr_base 8.3 k expat i686 2.5.0-2.fc38 local 115 k flexiblas i686 3.3.1-2.fc39 local 33 k flexiblas-netlib i686 3.3.1-2.fc39 local 3.1 M flexiblas-openblas-openmp i686 3.3.1-2.fc39 local 17 k fontconfig i686 2.14.2-2.fc39 local 291 k fonts-filesystem noarch 1:2.0.5-11.fc38 local 8.1 k freeglut i686 3.4.0-3.fc39 local 154 k freetype i686 2.13.0-1.fc39 local 419 k fribidi i686 1.0.13-1.fc39 local 91 k gc i686 8.2.2-3.fc38 local 112 k gcc-plugin-annobin i686 13.1.1-2.fc39 local 44 k gl-manpages noarch 1.1-26.20190306.fc38 local 1.0 M glib2 i686 2.76.2-1.fc39 local 2.8 M glibc-devel i686 2.37.9000-10.fc39 local 67 k glibc-headers-x86 noarch 2.37.9000-10.fc39 local 475 k gnutls i686 3.8.0-3.fc39 local 1.1 M google-noto-fonts-common noarch 20230501-1.fc39 local 16 k google-noto-sans-vf-fonts noarch 20230501-1.fc39 local 583 k graphite2 i686 1.3.14-11.fc38 local 96 k groff-base i686 1.22.4-11.fc38 local 1.0 M guile22 i686 2.2.7-8.fc39 local 6.5 M harfbuzz i686 7.3.0-1.fc39 local 926 k hwdata noarch 0.370-1.fc39 local 1.6 M jbigkit-libs i686 2.1-25.fc38 local 53 k jsoncpp i686 1.9.5-4.fc38 local 106 k kernel-headers i686 6.4.0-0.rc2.git0.1.fc39 local 1.4 M langpacks-core-font-en noarch 3.0-32.fc39 local 9.6 k lcms2 i686 2.15-1.fc39 copr_base 194 k libICE i686 1.0.10-10.fc38 local 73 k libICE-devel i686 1.0.10-10.fc38 local 46 k libSM i686 1.2.3-12.fc38 local 42 k libSM-devel i686 1.2.3-12.fc38 local 12 k libX11 i686 1.8.4-1.fc38 local 672 k libX11-common noarch 1.8.4-1.fc38 local 145 k libX11-devel i686 1.8.4-1.fc38 local 937 k libX11-xcb i686 1.8.4-1.fc38 local 11 k libXau i686 1.0.11-2.fc38 local 32 k libXau-devel i686 1.0.11-2.fc38 local 14 k libXdmcp i686 1.1.3-10.fc38 local 35 k libXext i686 1.3.5-2.fc38 local 42 k libXext-devel i686 1.3.5-2.fc38 local 72 k libXfixes i686 6.0.0-5.fc38 local 20 k libXfixes-devel i686 6.0.0-5.fc38 local 12 k libXfont2 i686 2.0.3-14.fc38 local 143 k libXft i686 2.3.8-2.fc39 local 73 k libXi i686 1.8.1-1.fc39 local 42 k libXmu i686 1.1.4-2.fc38 local 80 k libXrender i686 0.9.11-2.fc38 local 29 k libXt i686 1.2.1-4.fc38 local 189 k libXt-devel i686 1.2.1-4.fc38 local 408 k libXxf86vm i686 1.1.5-2.fc38 local 19 k libasan i686 13.1.1-2.fc39 local 503 k libatomic i686 13.1.1-2.fc39 local 30 k libb2 i686 0.98.1-8.fc38 local 29 k libdrm i686 2.4.114-2.fc38 local 172 k libdrm-devel i686 2.4.114-2.fc38 local 164 k libfontenc i686 1.1.6-2.fc38 local 32 k libgfortran i686 13.1.1-2.fc39 local 836 k libglvnd i686 1:1.6.0-2.fc38 local 126 k libglvnd-core-devel i686 1:1.6.0-2.fc38 local 17 k libglvnd-egl i686 1:1.6.0-2.fc38 local 38 k libglvnd-gles i686 1:1.6.0-2.fc38 local 30 k libglvnd-glx i686 1:1.6.0-2.fc38 local 135 k libglvnd-opengl i686 1:1.6.0-2.fc38 local 40 k libicu i686 72.1-2.fc38 local 11 M libicu-devel i686 72.1-2.fc38 local 845 k libimagequant i686 4.0.1-4.fc39 local 325 k libjpeg-turbo i686 2.1.4-2.fc38 local 198 k libjpeg-turbo-devel i686 2.1.4-2.fc38 local 98 k libmpc i686 1.3.1-2.fc38 local 77 k libpciaccess i686 0.16-8.fc38 local 29 k libpciaccess-devel i686 0.16-8.fc38 local 12 k libpng i686 2:1.6.37-14.fc38 local 128 k libqhull_r i686 1:7.2.1-12.fc38 local 181 k libquadmath i686 13.1.1-2.fc39 local 239 k libquadmath-devel i686 13.1.1-2.fc39 local 33 k libraqm i686 0.8.0-4.fc38 local 21 k libstdc++-devel i686 13.1.1-2.fc39 local 2.5 M libtiff i686 4.5.0-1.fc39 copr_base 328 k libtool-ltdl i686 2.4.7-6.fc38 local 39 k libubsan i686 13.1.1-2.fc39 local 232 k libunistring i686 1.1-3.fc38 local 552 k libunwind i686 1.7.0-0.1.rc2.fc39 local 67 k libuv i686 1:1.44.2-3.fc38 local 159 k libwayland-client i686 1.22.0-1.fc39 local 33 k libwayland-server i686 1.22.0-1.fc39 local 44 k libwebp i686 1.3.0-2.fc39 copr_base 293 k libwebp-devel i686 1.3.0-2.fc39 copr_base 39 k libxcb i686 1.13.1-11.fc38 local 247 k libxcb-devel i686 1.13.1-11.fc38 local 1.0 M libxcrypt-devel i686 4.4.33-7.fc39 local 30 k libxkbfile i686 1.1.1-2.fc38 local 93 k libxshmfence i686 1.3-12.fc38 local 12 k libxslt i686 1.1.38-1.fc39 local 199 k libzstd-devel i686 1.5.5-1.fc39 local 51 k mesa-libEGL i686 23.0.3-4.fc39 local 143 k mesa-libGL i686 23.0.3-4.fc39 local 186 k mesa-libGL-devel i686 23.0.3-4.fc39 local 35 k mesa-libGLU i686 9.0.1-8.fc38 local 158 k mesa-libGLU-devel i686 9.0.1-8.fc38 local 13 k mesa-libgbm i686 23.0.3-4.fc39 local 47 k mesa-libglapi i686 23.0.3-4.fc39 local 55 k mpdecimal i686 2.5.1-6.fc38 local 91 k ncurses i686 6.4-3.20230114.fc38 local 409 k nettle i686 3.8-3.fc38 local 425 k openblas i686 0.3.21-4.fc38 local 35 k openblas-openmp i686 0.3.21-4.fc38 local 3.8 M openjpeg2 i686 2.5.0-3.fc39 copr_base 189 k perl-Carp noarch 1.54-1.fc39 local 29 k perl-Class-Struct noarch 0.66-497.fc39 local 23 k perl-DynaLoader i686 1.52-497.fc39 local 27 k perl-Encode i686 4:3.19-493.fc38 local 1.2 M perl-Errno i686 1.36-497.fc39 local 16 k perl-Exporter noarch 5.77-490.fc38 local 31 k perl-Fcntl i686 1.15-497.fc39 local 22 k perl-File-Basename noarch 2.85-497.fc39 local 18 k perl-File-Path noarch 2.18-490.fc38 local 35 k perl-File-Temp noarch 1:0.231.100-490.fc38 local 59 k perl-File-stat noarch 1.12-497.fc39 local 18 k perl-Getopt-Long noarch 1:2.54-2.fc38 local 60 k perl-Getopt-Std noarch 1.13-497.fc39 local 17 k perl-HTTP-Tiny noarch 0.082-2.fc38 local 55 k perl-IO i686 1.50-497.fc39 local 89 k perl-IPC-Open3 noarch 1.22-497.fc39 local 24 k perl-MIME-Base64 i686 3.16-490.fc38 local 30 k perl-POSIX i686 2.03-497.fc39 local 103 k perl-PathTools i686 3.89-1.fc39 local 83 k perl-Pod-Escapes noarch 1:1.07-490.fc38 local 20 k perl-Pod-Perldoc noarch 3.28.01-491.fc38 local 80 k perl-Pod-Simple noarch 1:3.45-2.fc39 local 209 k perl-Pod-Usage noarch 4:2.03-4.fc38 local 40 k perl-Scalar-List-Utils i686 5:1.63-490.fc38 local 75 k perl-SelectSaver noarch 1.02-497.fc39 local 13 k perl-Socket i686 4:2.036-2.fc38 local 56 k perl-Storable i686 1:3.31-1.fc39 local 100 k perl-Symbol noarch 1.09-497.fc39 local 15 k perl-Term-ANSIColor noarch 5.01-491.fc38 local 47 k perl-Term-Cap noarch 1.18-1.fc39 local 22 k perl-Text-ParseWords noarch 3.31-490.fc38 local 16 k perl-Text-Tabs+Wrap noarch 2023.0511-1.fc39 local 22 k perl-Time-Local noarch 2:1.350-1.fc39 local 34 k perl-constant noarch 1.33-491.fc38 local 23 k perl-if noarch 0.61.000-497.fc39 local 15 k perl-interpreter i686 4:5.36.1-497.fc39 local 73 k perl-libs i686 4:5.36.1-497.fc39 local 2.2 M perl-locale noarch 1.10-497.fc39 local 15 k perl-mro i686 1.26-497.fc39 local 31 k perl-overload noarch 1.35-497.fc39 local 47 k perl-overloading noarch 0.02-497.fc39 local 14 k perl-parent noarch 1:0.241-1.fc39 local 14 k perl-podlators noarch 1:5.01-2.fc38 local 121 k perl-vars noarch 1.05-497.fc39 local 14 k pixman i686 0.42.2-1.fc39 local 296 k pyproject-rpm-macros noarch 1.8.0-1.fc39 local 41 k python-pip-wheel noarch 23.0.1-2.fc39 local 1.4 M python-rpm-macros noarch 3.11-10.fc39 local 20 k python-setuptools-wheel noarch 67.7.2-2.fc39 local 661 k python3 i686 3.11.3-1.fc39 local 28 k python3-appdirs noarch 1.4.4-8.fc38 local 23 k python3-brotli i686 1.0.9-11.fc38 local 321 k python3-cairo i686 1.23.0-2.fc38 local 128 k python3-contourpy i686 1.0.7-2.fc38 local 240 k python3-cycler noarch 0.11.0-7.fc38 local 21 k python3-dateutil noarch 1:2.8.2-6.fc39 local 349 k python3-fonttools i686 4.39.4-1.fc39 local 2.6 M python3-fs noarch 2.4.16-1.fc39 local 281 k python3-kiwisolver i686 1.4.4-7.fc38 local 72 k python3-libs i686 3.11.3-1.fc39 local 9.3 M python3-lxml i686 4.9.2-2.fc38 local 1.3 M python3-matplotlib-data noarch 3.7.1-1.fc39 local 526 k python3-matplotlib-data-fonts noarch 3.7.1-1.fc39 local 2.3 M python3-matplotlib-tk i686 3.7.1-1.fc39 local 53 k python3-munkres noarch 1.1.2-14.fc38 local 26 k python3-numpy i686 1:1.24.3-1.fc39 local 7.6 M python3-numpy-f2py i686 1:1.24.3-1.fc39 local 461 k python3-olefile noarch 0.46-19.fc38 local 67 k python3-packaging noarch 23.1-1.fc39 local 107 k python3-pillow i686 9.5.0-1.fc39 copr_base 890 k python3-pillow-tk i686 9.5.0-1.fc39 copr_base 31 k python3-pyparsing noarch 3.0.9-3.fc38 local 254 k python3-rpm-generators noarch 14-5.fc39 local 30 k python3-rpm-macros noarch 3.11-10.fc39 local 15 k python3-scipy i686 1.10.1-2.fc39 local 21 M python3-six noarch 1.16.0-9.fc38 local 42 k python3-tkinter i686 3.11.3-1.fc39 local 394 k rhash i686 1.4.3-2.fc38 local 210 k tcl i686 1:8.6.12-4.fc38 local 1.1 M tk i686 1:8.6.12-4.fc38 local 1.6 M vim-filesystem noarch 2:9.0.1562-1.fc39 local 18 k xkbcomp i686 1.4.6-5.fc38 local 104 k xkeyboard-config noarch 2.38-1.fc38 local 908 k xml-common noarch 0.6.3-60.fc38 local 31 k xorg-x11-proto-devel noarch 2022.2-3.fc38 local 264 k xorg-x11-server-common i686 1.20.14-23.fc39 local 35 k xorg-x11-xauth i686 1:1.1.2-3.fc38 local 36 k Transaction Summary ================================================================================ Install 253 Packages Total size: 206 M Total download size: 132 M Installed size: 852 M Downloading Packages: [SKIPPED] libtiff-4.5.0-1.fc39.i686.rpm: Already downloaded [SKIPPED] libtiff-devel-4.5.0-1.fc39.i686.rpm: Already downloaded [SKIPPED] libwebp-1.3.0-2.fc39.i686.rpm: Already downloaded [SKIPPED] libwebp-devel-1.3.0-2.fc39.i686.rpm: Already downloaded [SKIPPED] annobin-docs-12.10-1.fc39.noarch.rpm: Already downloaded [SKIPPED] annobin-plugin-gcc-12.10-1.fc39.i686.rpm: Already downloaded [SKIPPED] cairo-1.17.8-4.fc39.i686.rpm: Already downloaded [SKIPPED] cmake-filesystem-3.26.3-3.fc39.i686.rpm: Already downloaded [SKIPPED] cpp-13.1.1-2.fc39.i686.rpm: Already downloaded [SKIPPED] expat-2.5.0-2.fc38.i686.rpm: Already downloaded [SKIPPED] fontconfig-2.14.2-2.fc39.i686.rpm: Already downloaded [SKIPPED] fonts-filesystem-2.0.5-11.fc38.noarch.rpm: Already downloaded [SKIPPED] freetype-2.13.0-1.fc39.i686.rpm: Already downloaded [SKIPPED] fribidi-1.0.13-1.fc39.i686.rpm: Already downloaded [SKIPPED] gc-8.2.2-3.fc38.i686.rpm: Already downloaded [SKIPPED] gcc-13.1.1-2.fc39.i686.rpm: Already downloaded [SKIPPED] gcc-plugin-annobin-13.1.1-2.fc39.i686.rpm: Already downloaded [SKIPPED] gl-manpages-1.1-26.20190306.fc38.noarch.rpm: Already downloaded [SKIPPED] glib2-2.76.2-1.fc39.i686.rpm: Already downloaded [SKIPPED] glibc-devel-2.37.9000-10.fc39.i686.rpm: Already downloaded [SKIPPED] glibc-headers-x86-2.37.9000-10.fc39.noarch.rpm: Already downloaded [SKIPPED] gnutls-3.8.0-3.fc39.i686.rpm: Already downloaded [SKIPPED] google-noto-fonts-common-20230501-1.fc39.noarch.rpm: Already downloaded [SKIPPED] google-noto-sans-vf-fonts-20230501-1.fc39.noarch.rpm: Already downloaded [SKIPPED] graphite2-1.3.14-11.fc38.i686.rpm: Already downloaded [SKIPPED] guile22-2.2.7-8.fc39.i686.rpm: Already downloaded [SKIPPED] harfbuzz-7.3.0-1.fc39.i686.rpm: Already downloaded [SKIPPED] hwdata-0.370-1.fc39.noarch.rpm: Already downloaded [SKIPPED] jbigkit-libs-2.1-25.fc38.i686.rpm: Already downloaded [SKIPPED] kernel-headers-6.4.0-0.rc2.git0.1.fc39.i686.rpm: Already downloaded [SKIPPED] langpacks-core-font-en-3.0-32.fc39.noarch.rpm: Already downloaded [SKIPPED] libX11-1.8.4-1.fc38.i686.rpm: Already downloaded [SKIPPED] libX11-common-1.8.4-1.fc38.noarch.rpm: Already downloaded [SKIPPED] libX11-devel-1.8.4-1.fc38.i686.rpm: Already downloaded [SKIPPED] libX11-xcb-1.8.4-1.fc38.i686.rpm: Already downloaded [SKIPPED] libXau-1.0.11-2.fc38.i686.rpm: Already downloaded [SKIPPED] libXau-devel-1.0.11-2.fc38.i686.rpm: Already downloaded [SKIPPED] libXext-1.3.5-2.fc38.i686.rpm: Already downloaded [SKIPPED] libXfixes-6.0.0-5.fc38.i686.rpm: Already downloaded [SKIPPED] libXft-2.3.8-2.fc39.i686.rpm: Already downloaded [SKIPPED] libXrender-0.9.11-2.fc38.i686.rpm: Already downloaded [SKIPPED] libXxf86vm-1.1.5-2.fc38.i686.rpm: Already downloaded [SKIPPED] libasan-13.1.1-2.fc39.i686.rpm: Already downloaded [SKIPPED] libatomic-13.1.1-2.fc39.i686.rpm: Already downloaded [SKIPPED] libdrm-2.4.114-2.fc38.i686.rpm: Already downloaded [SKIPPED] libglvnd-1.6.0-2.fc38.i686.rpm: Already downloaded [SKIPPED] libglvnd-core-devel-1.6.0-2.fc38.i686.rpm: Already downloaded [SKIPPED] libglvnd-devel-1.6.0-2.fc38.i686.rpm: Already downloaded [SKIPPED] libglvnd-egl-1.6.0-2.fc38.i686.rpm: Already downloaded [SKIPPED] libglvnd-gles-1.6.0-2.fc38.i686.rpm: Already downloaded [SKIPPED] libglvnd-glx-1.6.0-2.fc38.i686.rpm: Already downloaded [SKIPPED] libglvnd-opengl-1.6.0-2.fc38.i686.rpm: Already downloaded [SKIPPED] libjpeg-turbo-2.1.4-2.fc38.i686.rpm: Already downloaded [SKIPPED] libjpeg-turbo-devel-2.1.4-2.fc38.i686.rpm: Already downloaded [SKIPPED] libmpc-1.3.1-2.fc38.i686.rpm: Already downloaded [SKIPPED] libpciaccess-0.16-8.fc38.i686.rpm: Already downloaded [SKIPPED] libpng-1.6.37-14.fc38.i686.rpm: Already downloaded [SKIPPED] libtool-ltdl-2.4.7-6.fc38.i686.rpm: Already downloaded [SKIPPED] libubsan-13.1.1-2.fc39.i686.rpm: Already downloaded [SKIPPED] libunistring-1.1-3.fc38.i686.rpm: Already downloaded [SKIPPED] libwayland-client-1.22.0-1.fc39.i686.rpm: Already downloaded [SKIPPED] libwayland-server-1.22.0-1.fc39.i686.rpm: Already downloaded [SKIPPED] libxcb-1.13.1-11.fc38.i686.rpm: Already downloaded [SKIPPED] libxcb-devel-1.13.1-11.fc38.i686.rpm: Already downloaded [SKIPPED] libxcrypt-devel-4.4.33-7.fc39.i686.rpm: Already downloaded [SKIPPED] libxshmfence-1.3-12.fc38.i686.rpm: Already downloaded [SKIPPED] libzstd-devel-1.5.5-1.fc39.i686.rpm: Already downloaded [SKIPPED] make-4.4.1-1.fc39.i686.rpm: Already downloaded [SKIPPED] mesa-libEGL-23.0.3-4.fc39.i686.rpm: Already downloaded [SKIPPED] mesa-libGL-23.0.3-4.fc39.i686.rpm: Already downloaded [SKIPPED] mesa-libGLU-9.0.1-8.fc38.i686.rpm: Already downloaded [SKIPPED] mesa-libGLU-devel-9.0.1-8.fc38.i686.rpm: Already downloaded [SKIPPED] mesa-libgbm-23.0.3-4.fc39.i686.rpm: Already downloaded [SKIPPED] mesa-libglapi-23.0.3-4.fc39.i686.rpm: Already downloaded [SKIPPED] nettle-3.8-3.fc38.i686.rpm: Already downloaded [SKIPPED] pixman-0.42.2-1.fc39.i686.rpm: Already downloaded [SKIPPED] xml-common-0.6.3-60.fc38.noarch.rpm: Already downloaded [SKIPPED] xorg-x11-proto-devel-2022.2-3.fc38.noarch.rpm: Already downloaded [SKIPPED] zlib-devel-1.2.13-3.fc38.i686.rpm: Already downloaded (80/253): emacs-filesystem-28.2-6.fc39.noarch.r 220 kB/s | 8.3 kB 00:00 (81/253): lcms2-2.15-1.fc39.i686.rpm 4.9 MB/s | 194 kB 00:00 (82/253): python3-pillow-tk-9.5.0-1.fc39.i686.r 2.9 MB/s | 31 kB 00:00 (83/253): openjpeg2-2.5.0-3.fc39.i686.rpm 3.7 MB/s | 189 kB 00:00 (84/253): python3-pillow-9.5.0-1.fc39.i686.rpm 58 MB/s | 890 kB 00:00 (85/253): boost-1.81.0-1.fc39.i686.rpm 491 kB/s | 14 kB 00:00 (86/253): boost-atomic-1.81.0-1.fc39.i686.rpm 722 kB/s | 20 kB 00:00 (87/253): boost-chrono-1.81.0-1.fc39.i686.rpm 987 kB/s | 27 kB 00:00 (88/253): boost-context-1.81.0-1.fc39.i686.rpm 4.9 MB/s | 17 kB 00:00 (89/253): boost-container-1.81.0-1.fc39.i686.rp 9.3 MB/s | 41 kB 00:00 (90/253): boost-coroutine-1.81.0-1.fc39.i686.rp 5.0 MB/s | 21 kB 00:00 (91/253): boost-date-time-1.81.0-1.fc39.i686.rp 3.8 MB/s | 16 kB 00:00 (92/253): boost-contract-1.81.0-1.fc39.i686.rpm 7.6 MB/s | 48 kB 00:00 (93/253): boost-fiber-1.81.0-1.fc39.i686.rpm 11 MB/s | 45 kB 00:00 (94/253): boost-filesystem-1.81.0-1.fc39.i686.r 14 MB/s | 73 kB 00:00 (95/253): boost-iostreams-1.81.0-1.fc39.i686.rp 6.9 MB/s | 45 kB 00:00 (96/253): boost-graph-1.81.0-1.fc39.i686.rpm 9.0 MB/s | 158 kB 00:00 (97/253): boost-json-1.81.0-1.fc39.i686.rpm 8.9 MB/s | 123 kB 00:00 (98/253): boost-locale-1.81.0-1.fc39.i686.rpm 22 MB/s | 243 kB 00:00 (99/253): boost-log-1.81.0-1.fc39.i686.rpm 38 MB/s | 531 kB 00:00 (100/253): 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Verifying : perl-File-stat-1.12-497.fc39.noarch 170/253 Verifying : perl-Getopt-Long-1:2.54-2.fc38.noarch 171/253 Verifying : perl-Getopt-Std-1.13-497.fc39.noarch 172/253 Verifying : perl-HTTP-Tiny-0.082-2.fc38.noarch 173/253 Verifying : perl-IO-1.50-497.fc39.i686 174/253 Verifying : perl-IPC-Open3-1.22-497.fc39.noarch 175/253 Verifying : perl-MIME-Base64-3.16-490.fc38.i686 176/253 Verifying : perl-POSIX-2.03-497.fc39.i686 177/253 Verifying : perl-PathTools-3.89-1.fc39.i686 178/253 Verifying : perl-Pod-Escapes-1:1.07-490.fc38.noarch 179/253 Verifying : perl-Pod-Perldoc-3.28.01-491.fc38.noarch 180/253 Verifying : perl-Pod-Simple-1:3.45-2.fc39.noarch 181/253 Verifying : perl-Pod-Usage-4:2.03-4.fc38.noarch 182/253 Verifying : perl-Scalar-List-Utils-5:1.63-490.fc38.i686 183/253 Verifying : perl-SelectSaver-1.02-497.fc39.noarch 184/253 Verifying : perl-Socket-4:2.036-2.fc38.i686 185/253 Verifying : perl-Storable-1:3.31-1.fc39.i686 186/253 Verifying : perl-Symbol-1.09-497.fc39.noarch 187/253 Verifying : perl-Term-ANSIColor-5.01-491.fc38.noarch 188/253 Verifying : perl-Term-Cap-1.18-1.fc39.noarch 189/253 Verifying : perl-Text-ParseWords-3.31-490.fc38.noarch 190/253 Verifying : perl-Text-Tabs+Wrap-2023.0511-1.fc39.noarch 191/253 Verifying : perl-Time-Local-2:1.350-1.fc39.noarch 192/253 Verifying : perl-constant-1.33-491.fc38.noarch 193/253 Verifying : perl-if-0.61.000-497.fc39.noarch 194/253 Verifying : perl-interpreter-4:5.36.1-497.fc39.i686 195/253 Verifying : perl-libs-4:5.36.1-497.fc39.i686 196/253 Verifying : perl-locale-1.10-497.fc39.noarch 197/253 Verifying : perl-macros-4:5.36.1-497.fc39.noarch 198/253 Verifying : perl-mro-1.26-497.fc39.i686 199/253 Verifying : perl-overload-1.35-497.fc39.noarch 200/253 Verifying : perl-overloading-0.02-497.fc39.noarch 201/253 Verifying : perl-parent-1:0.241-1.fc39.noarch 202/253 Verifying : perl-podlators-1:5.01-2.fc38.noarch 203/253 Verifying : perl-vars-1.05-497.fc39.noarch 204/253 Verifying : pixman-0.42.2-1.fc39.i686 205/253 Verifying : pybind11-devel-2.10.4-1.fc39.i686 206/253 Verifying : pyproject-rpm-macros-1.8.0-1.fc39.noarch 207/253 Verifying : python-pip-wheel-23.0.1-2.fc39.noarch 208/253 Verifying : python-rpm-macros-3.11-10.fc39.noarch 209/253 Verifying : python-setuptools-wheel-67.7.2-2.fc39.noarch 210/253 Verifying : python3-3.11.3-1.fc39.i686 211/253 Verifying : python3-appdirs-1.4.4-8.fc38.noarch 212/253 Verifying : python3-brotli-1.0.9-11.fc38.i686 213/253 Verifying : python3-cairo-1.23.0-2.fc38.i686 214/253 Verifying : python3-contourpy-1.0.7-2.fc38.i686 215/253 Verifying : python3-cycler-0.11.0-7.fc38.noarch 216/253 Verifying : python3-dateutil-1:2.8.2-6.fc39.noarch 217/253 Verifying : python3-devel-3.11.3-1.fc39.i686 218/253 Verifying : python3-flaky-3.7.0-10.fc38.noarch 219/253 Verifying : python3-fonttools-4.39.4-1.fc39.i686 220/253 Verifying : python3-fs-2.4.16-1.fc39.noarch 221/253 Verifying : python3-kiwisolver-1.4.4-7.fc38.i686 222/253 Verifying : python3-libs-3.11.3-1.fc39.i686 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Verifying : python3-wheel-1:0.40.0-1.fc39.noarch 241/253 Verifying : rhash-1.4.3-2.fc38.i686 242/253 Verifying : tcl-1:8.6.12-4.fc38.i686 243/253 Verifying : tk-1:8.6.12-4.fc38.i686 244/253 Verifying : vim-filesystem-2:9.0.1562-1.fc39.noarch 245/253 Verifying : xkbcomp-1.4.6-5.fc38.i686 246/253 Verifying : xkeyboard-config-2.38-1.fc38.noarch 247/253 Verifying : xml-common-0.6.3-60.fc38.noarch 248/253 Verifying : xorg-x11-proto-devel-2022.2-3.fc38.noarch 249/253 Verifying : xorg-x11-server-Xvfb-1.20.14-23.fc39.i686 250/253 Verifying : xorg-x11-server-common-1.20.14-23.fc39.i686 251/253 Verifying : xorg-x11-xauth-1:1.1.2-3.fc38.i686 252/253 Verifying : zlib-devel-1.2.13-3.fc38.i686 253/253 Installed: annobin-docs-12.10-1.fc39.noarch annobin-plugin-gcc-12.10-1.fc39.i686 boost-1.81.0-1.fc39.i686 boost-atomic-1.81.0-1.fc39.i686 boost-chrono-1.81.0-1.fc39.i686 boost-container-1.81.0-1.fc39.i686 boost-context-1.81.0-1.fc39.i686 boost-contract-1.81.0-1.fc39.i686 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libwebp-1.3.0-2.fc39.i686 libwebp-devel-1.3.0-2.fc39.i686 libxcb-1.13.1-11.fc38.i686 libxcb-devel-1.13.1-11.fc38.i686 libxcrypt-devel-4.4.33-7.fc39.i686 libxkbfile-1.1.1-2.fc38.i686 libxshmfence-1.3-12.fc38.i686 libxslt-1.1.38-1.fc39.i686 libzstd-devel-1.5.5-1.fc39.i686 make-1:4.4.1-1.fc39.i686 mesa-libEGL-23.0.3-4.fc39.i686 mesa-libGL-23.0.3-4.fc39.i686 mesa-libGL-devel-23.0.3-4.fc39.i686 mesa-libGLU-9.0.1-8.fc38.i686 mesa-libGLU-devel-9.0.1-8.fc38.i686 mesa-libgbm-23.0.3-4.fc39.i686 mesa-libglapi-23.0.3-4.fc39.i686 mpdecimal-2.5.1-6.fc38.i686 ncurses-6.4-3.20230114.fc38.i686 nettle-3.8-3.fc38.i686 openblas-0.3.21-4.fc38.i686 openblas-openmp-0.3.21-4.fc38.i686 openjpeg2-2.5.0-3.fc39.i686 perl-Carp-1.54-1.fc39.noarch perl-Class-Struct-0.66-497.fc39.noarch perl-DynaLoader-1.52-497.fc39.i686 perl-Encode-4:3.19-493.fc38.i686 perl-Errno-1.36-497.fc39.i686 perl-Exporter-5.77-490.fc38.noarch perl-Fcntl-1.15-497.fc39.i686 perl-File-Basename-2.85-497.fc39.noarch perl-File-Path-2.18-490.fc38.noarch perl-File-Temp-1:0.231.100-490.fc38.noarch perl-File-stat-1.12-497.fc39.noarch perl-Getopt-Long-1:2.54-2.fc38.noarch perl-Getopt-Std-1.13-497.fc39.noarch perl-HTTP-Tiny-0.082-2.fc38.noarch perl-IO-1.50-497.fc39.i686 perl-IPC-Open3-1.22-497.fc39.noarch perl-MIME-Base64-3.16-490.fc38.i686 perl-POSIX-2.03-497.fc39.i686 perl-PathTools-3.89-1.fc39.i686 perl-Pod-Escapes-1:1.07-490.fc38.noarch perl-Pod-Perldoc-3.28.01-491.fc38.noarch perl-Pod-Simple-1:3.45-2.fc39.noarch perl-Pod-Usage-4:2.03-4.fc38.noarch perl-Scalar-List-Utils-5:1.63-490.fc38.i686 perl-SelectSaver-1.02-497.fc39.noarch perl-Socket-4:2.036-2.fc38.i686 perl-Storable-1:3.31-1.fc39.i686 perl-Symbol-1.09-497.fc39.noarch perl-Term-ANSIColor-5.01-491.fc38.noarch perl-Term-Cap-1.18-1.fc39.noarch perl-Text-ParseWords-3.31-490.fc38.noarch perl-Text-Tabs+Wrap-2023.0511-1.fc39.noarch perl-Time-Local-2:1.350-1.fc39.noarch perl-constant-1.33-491.fc38.noarch perl-if-0.61.000-497.fc39.noarch perl-interpreter-4:5.36.1-497.fc39.i686 perl-libs-4:5.36.1-497.fc39.i686 perl-locale-1.10-497.fc39.noarch perl-macros-4:5.36.1-497.fc39.noarch perl-mro-1.26-497.fc39.i686 perl-overload-1.35-497.fc39.noarch perl-overloading-0.02-497.fc39.noarch perl-parent-1:0.241-1.fc39.noarch perl-podlators-1:5.01-2.fc38.noarch perl-vars-1.05-497.fc39.noarch pixman-0.42.2-1.fc39.i686 pybind11-devel-2.10.4-1.fc39.i686 pyproject-rpm-macros-1.8.0-1.fc39.noarch python-pip-wheel-23.0.1-2.fc39.noarch python-rpm-macros-3.11-10.fc39.noarch python-setuptools-wheel-67.7.2-2.fc39.noarch python3-3.11.3-1.fc39.i686 python3-appdirs-1.4.4-8.fc38.noarch python3-brotli-1.0.9-11.fc38.i686 python3-cairo-1.23.0-2.fc38.i686 python3-contourpy-1.0.7-2.fc38.i686 python3-cycler-0.11.0-7.fc38.noarch python3-dateutil-1:2.8.2-6.fc39.noarch python3-devel-3.11.3-1.fc39.i686 python3-flaky-3.7.0-10.fc38.noarch python3-fonttools-4.39.4-1.fc39.i686 python3-fs-2.4.16-1.fc39.noarch python3-kiwisolver-1.4.4-7.fc38.i686 python3-libs-3.11.3-1.fc39.i686 python3-lxml-4.9.2-2.fc38.i686 python3-matplotlib-3.7.1-1.fc39.i686 python3-matplotlib-data-3.7.1-1.fc39.noarch python3-matplotlib-data-fonts-3.7.1-1.fc39.noarch python3-matplotlib-tk-3.7.1-1.fc39.i686 python3-munkres-1.1.2-14.fc38.noarch python3-numpy-1:1.24.3-1.fc39.i686 python3-numpy-f2py-1:1.24.3-1.fc39.i686 python3-olefile-0.46-19.fc38.noarch python3-packaging-23.1-1.fc39.noarch python3-pillow-9.5.0-1.fc39.i686 python3-pillow-tk-9.5.0-1.fc39.i686 python3-pyparsing-3.0.9-3.fc38.noarch python3-rpm-generators-14-5.fc39.noarch python3-rpm-macros-3.11-10.fc39.noarch python3-scipy-1.10.1-2.fc39.i686 python3-setuptools-67.7.2-2.fc39.noarch python3-six-1.16.0-9.fc38.noarch python3-tkinter-3.11.3-1.fc39.i686 python3-wheel-1:0.40.0-1.fc39.noarch rhash-1.4.3-2.fc38.i686 tcl-1:8.6.12-4.fc38.i686 tk-1:8.6.12-4.fc38.i686 vim-filesystem-2:9.0.1562-1.fc39.noarch xkbcomp-1.4.6-5.fc38.i686 xkeyboard-config-2.38-1.fc38.noarch xml-common-0.6.3-60.fc38.noarch xorg-x11-proto-devel-2022.2-3.fc38.noarch xorg-x11-server-Xvfb-1.20.14-23.fc39.i686 xorg-x11-server-common-1.20.14-23.fc39.i686 xorg-x11-xauth-1:1.1.2-3.fc38.i686 zlib-devel-1.2.13-3.fc38.i686 Complete! Finish: build setup for smoldyn-2.67.3-4.fc39.src.rpm Start: rpmbuild smoldyn-2.67.3-4.fc39.src.rpm warning: %patchN is deprecated (6 usages found), use %patch N (or %patch -P N) Building target platforms: i686 Building for target i686 setting SOURCE_DATE_EPOCH=1674259200 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.Fs5Aed + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf Smoldyn-2.67.3 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/Smoldyn-2.67.3.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd Smoldyn-2.67.3 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + echo 'Patch #0 (smoldyn-fix_libpaths.patch):' Patch #0 (smoldyn-fix_libpaths.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .fix_libpaths --fuzz=0 patching file CMakeLists.txt Hunk #1 succeeded at 253 (offset 44 lines). Hunk #2 succeeded at 269 (offset 44 lines). Hunk #3 succeeded at 433 (offset 44 lines). Hunk #4 succeeded at 510 (offset 47 lines). Patch #1 (smoldyn-freeglut.patch): + echo 'Patch #1 (smoldyn-freeglut.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .freeglut --fuzz=0 patching file CMakeLists.txt Hunk #1 succeeded at 365 (offset 39 lines). + echo 'Patch #2 (smoldyn-create_soname.patch):' Patch #2 (smoldyn-create_soname.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .create_soname --fuzz=0 patching file CMakeLists.txt Hunk #2 succeeded at 517 (offset 47 lines). Patch #3 (smoldyn-avoid_automatic_wheel.patch): + echo 'Patch #3 (smoldyn-avoid_automatic_wheel.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .avoid_automatic_wheel --fuzz=0 patching file source/python/CMakeLists.txt Hunk #1 succeeded at 20 (offset -3 lines). Patch #4 (smoldyn-bug121.patch): + echo 'Patch #4 (smoldyn-bug121.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .bug121 --fuzz=0 patching file tests/test_api.py Patch #5 (smoldyn-bug123.patch): + echo 'Patch #5 (smoldyn-bug123.patch):' + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .bug123 --fuzz=0 patching file tests/test_api.py + rm -rf source/MSVClibs + rm -rf source/pybind11 + rm -rf source/BioNetGen source/MinGWlibs Toolchain-mingw32.cmake + rm -rf source/vcell/SimpleMesh.cpp source/vcell/SimpleMesh.h source/vcell/SimpleValueProvider.cpp source/vcell/SimpleValueProvider.h source/vcell/zconf.h source/vcell/zlib.h source/vcell/zlib.lib source/NextSubVolume/Eigen + rm -rf source/NextSubVolume/boost_include + rm -f 'source/vtk/*' + find . -type f -name '*.h' -exec chmod 0644 '{}' ';' + find . -type f -name '*.c' -exec chmod 0644 '{}' ';' + find . -type f -name '*.pdf' -exec chmod 0644 '{}' ';' + find . -type f -name '*.txt' -exec chmod 0644 '{}' ';' + find . -type f -name '*.txt' -exec sed -i 's/\r$//' '{}' ';' + sed -e 's|../../../source/BioNetGen/BNG2.pl|/usr/share/perl5/vendor_perl/BioNetGen/BNG2.pl|g' -i examples/S95_regression/lrmsim.txt examples/S12_bionetgen/lrm/lrmsim.txt examples/S12_bionetgen/abba/abbasim.txt examples/S94_archive/Andrews_2016/BioNetGen/lrm/lrmsim.txt examples/S94_archive/Andrews_2016/BioNetGen/abba/abbasim.txt + cp -p source/libSteve/SFMT/LICENSE.txt source/libSteve/SFMT/SFMT-LICENSE.txt + cp -p source/libSteve/SFMT/README.txt source/libSteve/SFMT/SFMT-README.txt + find -name '*.pyc' -delete + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.TOnKNI + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd Smoldyn-2.67.3 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DBUILD_SHARED_LIBS:BOOL=ON -Wno-dev -B build -DCPACK_BINARY_STGZ:BOOL=OFF -DCPACK_BINARY_TGZ:BOOL=OFF -DCPACK_BINARY_TZ:BOOL=OFF -DCPACK_SOURCE_TBZ2:BOOL=OFF -DCPACK_SOURCE_TGZ:BOOL=OFF -DCPACK_SOURCE_TXZ:BOOL=OFF -DCPACK_SOURCE_TZ:BOOL=OFF -DOPTION_VCELL:BOOL=OFF -DOPTION_VTK:BOOL=OFF -DBUILD_SHARED_LIBS:BOOL=ON -DSMOLDYN_VERSION:STRING=2.67.3 -DSMOLDYN_VERSION_MAJOR:STRING=2 -DOPTION_TARGET_LIBSMOLDYN:BOOL=ON -DOPTION_STATIC:BOOL=OFF -DOPTION_PYTHON:BOOL=ON -DPYBIND11_FINDPYTHON:BOOL=ON -Dpybind11_DIR:PATH=/usr/share/cmake/pybind11 -DOPTION_USE_ZLIB:BOOL=ON -DOPTION_PDE:BOOL=ON -DPERL_VENDORLIB:PATH=/usr/share/perl5/vendor_perl -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_INSTALL_LIBDIR:PATH=/usr/lib -DCMAKE_INSTALL_PREFIX:PATH=/usr -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE -DCMAKE_COLOR_MAKEFILE:BOOL=ON -DCMAKE_SKIP_RPATH:BOOL=YES -DHAVE_GL_FREEGLUT_H=TRUE -DOPTION_EXAMPLES:BOOL=OFF -DOPTION_DOCS:BOOL=OFF -- The CXX compiler identification is GNU 13.1.1 -- The C compiler identification is GNU 13.1.1 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Smoldyn version is set to: '2.67.3' -- Compiling for Smoldyn: ON -- Compiling for Libsmoldyn: ON -- Option to compile Smoldyn for VCell: OFF -- Option to cross-compile for Windows using MinGW: OFF -- Option to include NextSubvolume: ON -- Option to include VTK: OFF -- Option to compile with static libraries: OFF -- Option to include OpenGL support: ON -- Option to include LibTiff: ON -- Option to include Zlib: ON -- Option to incude Python module: ON -- Option to run Libsmoldyn examples: OFF -- Option to build documentation: OFF -- Performing Test C_FLAG_EXISTS -- Performing Test C_FLAG_EXISTS - Success -- Performing Test CXX_FLAG_EXISTS -- Performing Test CXX_FLAG_EXISTS - Success -- [COMPILER] Adding -Wno-unused-parameter -- Build type: Release -- Compiling on a Linux computer -- CMAKE_CXX_FLAGS variable: '-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' -- BioNetGen path: '/usr/share/perl5/vendor_perl/BioNetGen/BNG2.pl' -- Found OpenGL: /usr/lib/libOpenGL.so -- OpenGL found: '/usr/include', '/usr/lib/libGL.so;/usr/lib/libGLU.so' -- Found GLUT: /usr/lib/libglut.so -- Found TIFF: /usr/lib/libtiff.so (found version "4.5.0") -- Found Libtiff: '/usr/include', '/usr/lib/libtiff.so' -- Found Zlib: '/usr/include', '/usr/lib/libz.so' -- Boost headers found: '/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/boost_include' -- Found Python3: /usr/bin/python3.11 (found version "3.11.3") found components: Interpreter Development Development.Module Development.Embed -- Performing Test HAS_FLTO -- Performing Test HAS_FLTO - Success -- Found pybind11: /usr/include (found version "2.10.4") -- [TEST] Found 15 test scripts -- Configuring done (2.0s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP LIB_INSTALL_DIR SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/Smoldyn-2.67.3/build + /usr/bin/make -O -j2 V=1 VERBOSE=1 -C build make: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/cmake -S/builddir/build/BUILD/Smoldyn-2.67.3 -B/builddir/build/BUILD/Smoldyn-2.67.3/build --check-build-system CMakeFiles/Makefile.cmake 0 make: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/Smoldyn-2.67.3/build/CMakeFiles /builddir/build/BUILD/Smoldyn-2.67.3/build//CMakeFiles/progress.marks make: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f CMakeFiles/Makefile2 all /usr/bin/make -f source/NextSubVolume/CMakeFiles/nsv.dir/build.make source/NextSubVolume/CMakeFiles/nsv.dir/depend /usr/bin/make -f source/libSteve/CMakeFiles/Steve.dir/build.make source/libSteve/CMakeFiles/Steve.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/NextSubVolume /builddir/build/BUILD/Smoldyn-2.67.3/build/source/NextSubVolume/CMakeFiles/nsv.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/NextSubVolume/CMakeFiles/nsv.dir/build.make source/NextSubVolume/CMakeFiles/nsv.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve/CMakeFiles/Steve.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/libSteve/CMakeFiles/Steve.dir/build.make source/libSteve/CMakeFiles/Steve.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 1%] Building CXX object source/NextSubVolume/CMakeFiles/nsv.dir/StructuredGrid.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/NextSubVolume && /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -isystem /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/boost_include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/NextSubVolume/CMakeFiles/nsv.dir/StructuredGrid.cpp.o -MF CMakeFiles/nsv.dir/StructuredGrid.cpp.o.d -o CMakeFiles/nsv.dir/StructuredGrid.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/StructuredGrid.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 2%] Building C object source/libSteve/CMakeFiles/Steve.dir/Geometry.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/Geometry.c.o -MF CMakeFiles/Steve.dir/Geometry.c.o.d -o CMakeFiles/Steve.dir/Geometry.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/Geometry.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 3%] Building CXX object source/NextSubVolume/CMakeFiles/nsv.dir/Species.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/NextSubVolume && /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -isystem /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/boost_include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/NextSubVolume/CMakeFiles/nsv.dir/Species.cpp.o -MF CMakeFiles/nsv.dir/Species.cpp.o.d -o CMakeFiles/nsv.dir/Species.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/Species.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 4%] Building C object source/libSteve/CMakeFiles/Steve.dir/List.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/List.c.o -MF CMakeFiles/Steve.dir/List.c.o.d -o CMakeFiles/Steve.dir/List.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/List.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 7%] Building C object source/libSteve/CMakeFiles/Steve.dir/math2.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/math2.c.o -MF CMakeFiles/Steve.dir/math2.c.o.d -o CMakeFiles/Steve.dir/math2.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/math2.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 6%] Building CXX object source/NextSubVolume/CMakeFiles/nsv.dir/ReactionEquation.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/NextSubVolume && /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -isystem /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/boost_include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/NextSubVolume/CMakeFiles/nsv.dir/ReactionEquation.cpp.o -MF CMakeFiles/nsv.dir/ReactionEquation.cpp.o.d -o CMakeFiles/nsv.dir/ReactionEquation.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/ReactionEquation.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 8%] Building C object source/libSteve/CMakeFiles/Steve.dir/opengl2.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/opengl2.c.o -MF CMakeFiles/Steve.dir/opengl2.c.o.d -o CMakeFiles/Steve.dir/opengl2.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/opengl2.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 11%] Building C object source/libSteve/CMakeFiles/Steve.dir/parse.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/parse.c.o -MF CMakeFiles/Steve.dir/parse.c.o.d -o CMakeFiles/Steve.dir/parse.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/parse.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 12%] Building C object source/libSteve/CMakeFiles/Steve.dir/queue.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/queue.c.o -MF CMakeFiles/Steve.dir/queue.c.o.d -o CMakeFiles/Steve.dir/queue.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/queue.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 13%] Building C object source/libSteve/CMakeFiles/Steve.dir/random2.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/random2.c.o -MF CMakeFiles/Steve.dir/random2.c.o.d -o CMakeFiles/Steve.dir/random2.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/random2.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 14%] Building C object source/libSteve/CMakeFiles/Steve.dir/Rn.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/Rn.c.o -MF CMakeFiles/Steve.dir/Rn.c.o.d -o CMakeFiles/Steve.dir/Rn.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/Rn.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 16%] Building C object source/libSteve/CMakeFiles/Steve.dir/RnSort.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/RnSort.c.o -MF CMakeFiles/Steve.dir/RnSort.c.o.d -o CMakeFiles/Steve.dir/RnSort.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/RnSort.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 9%] Building CXX object source/NextSubVolume/CMakeFiles/nsv.dir/NextSubvolumeMethod.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/NextSubVolume && /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -isystem /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/boost_include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/NextSubVolume/CMakeFiles/nsv.dir/NextSubvolumeMethod.cpp.o -MF CMakeFiles/nsv.dir/NextSubvolumeMethod.cpp.o.d -o CMakeFiles/nsv.dir/NextSubvolumeMethod.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/NextSubvolumeMethod.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 17%] Building C object source/libSteve/CMakeFiles/Steve.dir/rxnparam.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/rxnparam.c.o -MF CMakeFiles/Steve.dir/rxnparam.c.o.d -o CMakeFiles/Steve.dir/rxnparam.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/rxnparam.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 18%] Building CXX object source/NextSubVolume/CMakeFiles/nsv.dir/Kairos.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/NextSubVolume && /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -isystem /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/boost_include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/NextSubVolume/CMakeFiles/nsv.dir/Kairos.cpp.o -MF CMakeFiles/nsv.dir/Kairos.cpp.o.d -o CMakeFiles/nsv.dir/Kairos.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/Kairos.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 20%] Building CXX object source/NextSubVolume/CMakeFiles/nsv.dir/Io.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/NextSubVolume && /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -isystem /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/boost_include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/NextSubVolume/CMakeFiles/nsv.dir/Io.cpp.o -MF CMakeFiles/nsv.dir/Io.cpp.o.d -o CMakeFiles/nsv.dir/Io.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/Io.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 19%] Building C object source/libSteve/CMakeFiles/Steve.dir/SimCommand.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/SimCommand.c.o -MF CMakeFiles/Steve.dir/SimCommand.c.o.d -o CMakeFiles/Steve.dir/SimCommand.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/SimCommand.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 22%] Building CXX object source/NextSubVolume/CMakeFiles/nsv.dir/Geometry.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/NextSubVolume && /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -isystem /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/boost_include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/NextSubVolume/CMakeFiles/nsv.dir/Geometry.cpp.o -MF CMakeFiles/nsv.dir/Geometry.cpp.o.d -o CMakeFiles/nsv.dir/Geometry.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/Geometry.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 23%] Building C object source/libSteve/CMakeFiles/Steve.dir/Sphere.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/Sphere.c.o -MF CMakeFiles/Steve.dir/Sphere.c.o.d -o CMakeFiles/Steve.dir/Sphere.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/Sphere.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 25%] Building C object source/libSteve/CMakeFiles/Steve.dir/string2.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection 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-Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/SurfaceParam.c.o -MF CMakeFiles/Steve.dir/SurfaceParam.c.o.d -o CMakeFiles/Steve.dir/SurfaceParam.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/SurfaceParam.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 28%] Building C object source/libSteve/CMakeFiles/Steve.dir/Zn.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/libSteve/CMakeFiles/Steve.dir/Zn.c.o -MF CMakeFiles/Steve.dir/Zn.c.o.d -o CMakeFiles/Steve.dir/Zn.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/Zn.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 29%] Building C object source/libSteve/CMakeFiles/Steve.dir/SFMT/SFMT.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/../Smoldyn -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall 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-grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT source/NextSubVolume/CMakeFiles/nsv.dir/nsvc.cpp.o -MF CMakeFiles/nsv.dir/nsvc.cpp.o.d -o CMakeFiles/nsv.dir/nsvc.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/nsvc.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[1]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 29%] Built target nsv make[1]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f CMakeFiles/smoldyn_static.dir/build.make CMakeFiles/smoldyn_static.dir/depend /usr/bin/make -f CMakeFiles/smoldyn_shared.dir/build.make CMakeFiles/smoldyn_shared.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/CMakeFiles/smoldyn_static.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f CMakeFiles/smoldyn_static.dir/build.make CMakeFiles/smoldyn_static.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/CMakeFiles/smoldyn_shared.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f CMakeFiles/smoldyn_shared.dir/build.make CMakeFiles/smoldyn_shared.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 30%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolbng.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolbng.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolbng.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolbng.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolbng.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 32%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolbng.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolbng.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolbng.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolbng.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolbng.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 34%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolboxes.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolboxes.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolboxes.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolboxes.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c: In function 'boxesupdatelists': /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c:783:55: warning: argument 1 range [2147483648, 4294967294] exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 783 | bptr->neigh=(boxptr*) calloc(nneigh,sizeof(boxptr)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/random2.h:17, from /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c:13: /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 33%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolboxes.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolboxes.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolboxes.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolboxes.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c: In function 'boxesupdatelists': /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c:783:55: warning: argument 1 range [2147483648, 4294967294] exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 783 | bptr->neigh=(boxptr*) calloc(nneigh,sizeof(boxptr)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/random2.h:17, from /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c:13: /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 35%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcmd.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcmd.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcmd.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcmd.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolcmd.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 37%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcmd.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcmd.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcmd.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcmd.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolcmd.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 39%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcomparts.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcomparts.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcomparts.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcomparts.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolcomparts.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 38%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcomparts.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcomparts.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcomparts.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcomparts.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolcomparts.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 41%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolfilament.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolfilament.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolfilament.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolfilament.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolfilament.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 40%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolfilament.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolfilament.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolfilament.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolfilament.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolfilament.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 44%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolgraphics.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolgraphics.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolgraphics.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolgraphics.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolgraphics.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 43%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolgraphics.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolgraphics.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolgraphics.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolgraphics.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolgraphics.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 46%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolmolec.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolmolec.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolmolec.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolmolec.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolmolec.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 45%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolmolec.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolmolec.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolmolec.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolmolec.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolmolec.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 48%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolport.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolport.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolport.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolport.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolport.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 49%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolport.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolport.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolport.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolport.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolport.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 51%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smollattice.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smollattice.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smollattice.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smollattice.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smollattice.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 50%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smollattice.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smollattice.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smollattice.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smollattice.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smollattice.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 53%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolreact.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolreact.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolreact.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolreact.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolreact.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 54%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolreact.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolreact.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolreact.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolreact.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolreact.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 56%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolrule.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolrule.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolrule.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolrule.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolrule.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 55%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolrule.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolrule.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolrule.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolrule.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolrule.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 59%] Building CXX object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsim.cpp.o /usr/bin/g++ -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsim.cpp.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsim.cpp.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsim.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolsim.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 58%] Building CXX object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsim.cpp.o /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsim.cpp.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsim.cpp.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsim.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolsim.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 60%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsurface.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsurface.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsurface.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsurface.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolsurface.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 61%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsurface.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsurface.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsurface.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsurface.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolsurface.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 64%] Building C object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolwall.c.o /usr/bin/gcc -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolwall.c.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolwall.c.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolwall.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolwall.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 62%] Building C object CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolwall.c.o /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolwall.c.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolwall.c.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolwall.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolwall.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 65%] Building CXX object CMakeFiles/smoldyn_shared.dir/source/Smoldyn/libsmoldyn.cpp.o /usr/bin/g++ -Dsmoldyn_shared_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_shared.dir/source/Smoldyn/libsmoldyn.cpp.o -MF CMakeFiles/smoldyn_shared.dir/source/Smoldyn/libsmoldyn.cpp.o.d -o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/libsmoldyn.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/libsmoldyn.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 66%] Building CXX object CMakeFiles/smoldyn_static.dir/source/Smoldyn/libsmoldyn.cpp.o /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn_static.dir/source/Smoldyn/libsmoldyn.cpp.o -MF CMakeFiles/smoldyn_static.dir/source/Smoldyn/libsmoldyn.cpp.o.d -o CMakeFiles/smoldyn_static.dir/source/Smoldyn/libsmoldyn.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/libsmoldyn.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 69%] Linking CXX static library libsmoldyn_static.a /usr/bin/cmake -P CMakeFiles/smoldyn_static.dir/cmake_clean_target.cmake /usr/bin/cmake -E cmake_link_script CMakeFiles/smoldyn_static.dir/link.txt --verbose=1 /usr/bin/ar qc libsmoldyn_static.a CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolbng.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolboxes.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcmd.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolcomparts.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolfilament.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolgraphics.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolmolec.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolport.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smollattice.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolreact.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolrule.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsim.cpp.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolsurface.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/smolwall.c.o CMakeFiles/smoldyn_static.dir/source/Smoldyn/libsmoldyn.cpp.o source/libSteve/CMakeFiles/Steve.dir/Geometry.c.o source/libSteve/CMakeFiles/Steve.dir/List.c.o source/libSteve/CMakeFiles/Steve.dir/math2.c.o source/libSteve/CMakeFiles/Steve.dir/opengl2.c.o source/libSteve/CMakeFiles/Steve.dir/parse.c.o source/libSteve/CMakeFiles/Steve.dir/queue.c.o source/libSteve/CMakeFiles/Steve.dir/random2.c.o source/libSteve/CMakeFiles/Steve.dir/Rn.c.o source/libSteve/CMakeFiles/Steve.dir/RnSort.c.o source/libSteve/CMakeFiles/Steve.dir/rxnparam.c.o source/libSteve/CMakeFiles/Steve.dir/SimCommand.c.o source/libSteve/CMakeFiles/Steve.dir/Sphere.c.o source/libSteve/CMakeFiles/Steve.dir/string2.c.o source/libSteve/CMakeFiles/Steve.dir/SurfaceParam.c.o source/libSteve/CMakeFiles/Steve.dir/Zn.c.o source/libSteve/CMakeFiles/Steve.dir/SFMT/SFMT.c.o source/NextSubVolume/CMakeFiles/nsv.dir/StructuredGrid.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Species.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/ReactionEquation.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/NextSubvolumeMethod.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Kairos.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Io.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Geometry.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/nsvc.cpp.o /usr/bin/ranlib libsmoldyn_static.a make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[1]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 69%] Built target smoldyn_static make[1]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/python/CMakeFiles/_pysmoldyn.dir/build.make source/python/CMakeFiles/_pysmoldyn.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python/CMakeFiles/_pysmoldyn.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/python/CMakeFiles/_pysmoldyn.dir/build.make source/python/CMakeFiles/_pysmoldyn.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 70%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolbng.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolbng.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolbng.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolbng.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolbng.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 71%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolboxes.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolboxes.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolboxes.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolboxes.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c: In function 'boxesupdatelists': /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c:783:55: warning: argument 1 range [2147483648, 4294967294] exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 783 | bptr->neigh=(boxptr*) calloc(nneigh,sizeof(boxptr)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve/random2.h:17, from /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c:13: /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 72%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcmd.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcmd.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcmd.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcmd.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolcmd.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 74%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcomparts.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcomparts.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcomparts.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcomparts.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolcomparts.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 75%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolfilament.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolfilament.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolfilament.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolfilament.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolfilament.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 76%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolgraphics.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolgraphics.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolgraphics.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolgraphics.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolgraphics.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 77%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolmolec.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolmolec.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolmolec.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolmolec.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolmolec.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 79%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolport.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolport.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolport.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolport.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolport.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 80%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smollattice.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smollattice.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smollattice.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smollattice.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smollattice.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 81%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolreact.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolreact.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolreact.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolreact.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolreact.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 82%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolrule.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolrule.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolrule.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolrule.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolrule.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 83%] Building CXX object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsim.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsim.cpp.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsim.cpp.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsim.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolsim.cpp In file included from /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:15, from /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolsim.cpp:27: /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/../python/CallbackFunc.h:20:7: warning: 'CallbackFunc' declared with greater visibility than the type of its field 'CallbackFunc::func_' [-Wattributes] 20 | class CallbackFunc | ^~~~~~~~~~~~ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/../python/CallbackFunc.h:20:7: warning: 'CallbackFunc' declared with greater visibility than the type of its field 'CallbackFunc::target_' [-Wattributes] /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/../python/CallbackFunc.h:20:7: warning: 'CallbackFunc' declared with greater visibility than the type of its field 'CallbackFunc::args_' [-Wattributes] make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 85%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsurface.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsurface.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsurface.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsurface.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolsurface.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 86%] Building C object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolwall.c.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/gcc -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu11 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolwall.c.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolwall.c.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolwall.c.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolwall.c make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 67%] Linking CXX shared library libsmoldyn_shared.so /usr/bin/cmake -E cmake_link_script CMakeFiles/smoldyn_shared.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libsmoldyn_shared.so.2 -o libsmoldyn_shared.so.2.67.3 CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolbng.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolboxes.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcmd.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolcomparts.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolfilament.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolgraphics.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolmolec.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolport.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smollattice.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolreact.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolrule.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsim.cpp.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolsurface.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/smolwall.c.o CMakeFiles/smoldyn_shared.dir/source/Smoldyn/libsmoldyn.cpp.o source/libSteve/CMakeFiles/Steve.dir/Geometry.c.o source/libSteve/CMakeFiles/Steve.dir/List.c.o source/libSteve/CMakeFiles/Steve.dir/math2.c.o source/libSteve/CMakeFiles/Steve.dir/opengl2.c.o source/libSteve/CMakeFiles/Steve.dir/parse.c.o source/libSteve/CMakeFiles/Steve.dir/queue.c.o source/libSteve/CMakeFiles/Steve.dir/random2.c.o source/libSteve/CMakeFiles/Steve.dir/Rn.c.o source/libSteve/CMakeFiles/Steve.dir/RnSort.c.o source/libSteve/CMakeFiles/Steve.dir/rxnparam.c.o source/libSteve/CMakeFiles/Steve.dir/SimCommand.c.o source/libSteve/CMakeFiles/Steve.dir/Sphere.c.o source/libSteve/CMakeFiles/Steve.dir/string2.c.o source/libSteve/CMakeFiles/Steve.dir/SurfaceParam.c.o source/libSteve/CMakeFiles/Steve.dir/Zn.c.o source/libSteve/CMakeFiles/Steve.dir/SFMT/SFMT.c.o source/NextSubVolume/CMakeFiles/nsv.dir/StructuredGrid.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Species.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/ReactionEquation.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/NextSubvolumeMethod.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Kairos.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Io.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/Geometry.cpp.o source/NextSubVolume/CMakeFiles/nsv.dir/nsvc.cpp.o /usr/lib/libGL.so /usr/lib/libGLU.so -lglut /usr/lib/libtiff.so /usr/lib/libz.so /usr/bin/cmake -E cmake_symlink_library libsmoldyn_shared.so.2.67.3 libsmoldyn_shared.so.2 libsmoldyn_shared.so /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:714:16: warning: type 'struct latticestruct' violates the C++ One Definition Rule [-Wodr] 714 | typedef struct latticestruct | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:714:16: note: a different type is defined in another translation unit 714 | typedef struct latticestruct | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:739:26: note: the first difference of corresponding definitions is field 'nsv' 739 | NextSubvolumeMethod* nsv; // nsv class | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:739:26: note: a field of same name but different type is defined in another translation unit 739 | NextSubvolumeMethod* nsv; // nsv class | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:714:16: note: type name 'NextSubvolumeMethod' should match type name 'Kairos::NextSubvolumeMethod' 714 | typedef struct latticestruct | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/NextSubvolumeMethod.h:137:7: note: the incompatible type is defined here 137 | class NextSubvolumeMethod | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c: In function 'boxesupdatelists': /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c:783:55: warning: argument 1 range [2147483648, 4294967294] exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 783 | bptr->neigh=(boxptr*) calloc(nneigh,sizeof(boxptr)); | ^ /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^ make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[1]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 87%] Built target smoldyn_shared make[1]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f CMakeFiles/smoldyn.dir/build.make CMakeFiles/smoldyn.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/CMakeFiles/smoldyn.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f CMakeFiles/smoldyn.dir/build.make CMakeFiles/smoldyn.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 88%] Building CXX object CMakeFiles/smoldyn.dir/source/Smoldyn/smoldyn.cpp.o /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu++14 -Wno-unused-parameter -Wall -Wextra -MD -MT CMakeFiles/smoldyn.dir/source/Smoldyn/smoldyn.cpp.o -MF CMakeFiles/smoldyn.dir/source/Smoldyn/smoldyn.cpp.o.d -o CMakeFiles/smoldyn.dir/source/Smoldyn/smoldyn.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 90%] Linking CXX executable smoldyn /usr/bin/cmake -E cmake_link_script CMakeFiles/smoldyn.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/smoldyn.dir/source/Smoldyn/smoldyn.cpp.o -o smoldyn libsmoldyn_shared.so.2.67.3 /usr/lib/libGL.so /usr/lib/libGLU.so -lglut /usr/lib/libtiff.so /usr/lib/libz.so make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[1]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 90%] Built target smoldyn make[1]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 87%] Building CXX object source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/libsmoldyn.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/g++ -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/usr/include/python3.11 -I/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu++14 -fPIC -Wno-unused-parameter -Wall -Wextra -DENABLE_PYTHON_CALLBACK -DCOMPILE_AS_PY_MODULE -MD -MT source/python/CMakeFiles/_pysmoldyn.dir/__/Smoldyn/libsmoldyn.cpp.o -MF CMakeFiles/_pysmoldyn.dir/__/Smoldyn/libsmoldyn.cpp.o.d -o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/libsmoldyn.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/libsmoldyn.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' In file included from /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:15, from /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/libsmoldyn.cpp:15: /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/../python/CallbackFunc.h:20:7: warning: 'CallbackFunc' declared with greater visibility than the type of its field 'CallbackFunc::func_' [-Wattributes] 20 | class CallbackFunc | ^~~~~~~~~~~~ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/../python/CallbackFunc.h:20:7: warning: 'CallbackFunc' declared with greater visibility than the type of its field 'CallbackFunc::target_' [-Wattributes] /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/../python/CallbackFunc.h:20:7: warning: 'CallbackFunc' declared with greater visibility than the type of its field 'CallbackFunc::args_' [-Wattributes] make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 91%] Linking CXX static library lib_pysmoldyn.a cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/cmake -P CMakeFiles/_pysmoldyn.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/_pysmoldyn.dir/link.txt --verbose=1 /usr/bin/ar qc lib_pysmoldyn.a CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolbng.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolboxes.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcmd.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolcomparts.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolfilament.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolgraphics.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolmolec.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolport.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smollattice.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolreact.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolrule.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsim.cpp.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolsurface.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/smolwall.c.o CMakeFiles/_pysmoldyn.dir/__/Smoldyn/libsmoldyn.cpp.o ../libSteve/CMakeFiles/Steve.dir/Geometry.c.o ../libSteve/CMakeFiles/Steve.dir/List.c.o ../libSteve/CMakeFiles/Steve.dir/math2.c.o ../libSteve/CMakeFiles/Steve.dir/opengl2.c.o ../libSteve/CMakeFiles/Steve.dir/parse.c.o ../libSteve/CMakeFiles/Steve.dir/queue.c.o ../libSteve/CMakeFiles/Steve.dir/random2.c.o ../libSteve/CMakeFiles/Steve.dir/Rn.c.o ../libSteve/CMakeFiles/Steve.dir/RnSort.c.o ../libSteve/CMakeFiles/Steve.dir/rxnparam.c.o ../libSteve/CMakeFiles/Steve.dir/SimCommand.c.o ../libSteve/CMakeFiles/Steve.dir/Sphere.c.o ../libSteve/CMakeFiles/Steve.dir/string2.c.o ../libSteve/CMakeFiles/Steve.dir/SurfaceParam.c.o ../libSteve/CMakeFiles/Steve.dir/Zn.c.o ../libSteve/CMakeFiles/Steve.dir/SFMT/SFMT.c.o ../NextSubVolume/CMakeFiles/nsv.dir/StructuredGrid.cpp.o ../NextSubVolume/CMakeFiles/nsv.dir/Species.cpp.o ../NextSubVolume/CMakeFiles/nsv.dir/ReactionEquation.cpp.o ../NextSubVolume/CMakeFiles/nsv.dir/NextSubvolumeMethod.cpp.o ../NextSubVolume/CMakeFiles/nsv.dir/Kairos.cpp.o ../NextSubVolume/CMakeFiles/nsv.dir/Io.cpp.o ../NextSubVolume/CMakeFiles/nsv.dir/Geometry.cpp.o ../NextSubVolume/CMakeFiles/nsv.dir/nsvc.cpp.o /usr/bin/ranlib lib_pysmoldyn.a make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[1]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 91%] Built target _pysmoldyn make[1]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/python/CMakeFiles/_smoldyn.dir/build.make source/python/CMakeFiles/_smoldyn.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python/CMakeFiles/_smoldyn.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/python/CMakeFiles/_smoldyn.dir/build.make source/python/CMakeFiles/_smoldyn.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 93%] Building CXX object source/python/CMakeFiles/_smoldyn.dir/CallbackFunc.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/g++ -D_smoldyn_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/external/pybind11/include -isystem /usr/include/python3.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -Wno-unused-parameter -Wall -Wextra -DSMOLDYN_VERSION=2.67.3 -DENABLE_PYTHON_CALLBACK -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT source/python/CMakeFiles/_smoldyn.dir/CallbackFunc.cpp.o -MF CMakeFiles/_smoldyn.dir/CallbackFunc.cpp.o.d -o CMakeFiles/_smoldyn.dir/CallbackFunc.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/python/CallbackFunc.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 93%] Building CXX object source/python/CMakeFiles/_smoldyn.dir/Command.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/g++ -D_smoldyn_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/external/pybind11/include -isystem /usr/include/python3.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -Wno-unused-parameter -Wall -Wextra -DSMOLDYN_VERSION=2.67.3 -DENABLE_PYTHON_CALLBACK -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT source/python/CMakeFiles/_smoldyn.dir/Command.cpp.o -MF CMakeFiles/_smoldyn.dir/Command.cpp.o.d -o CMakeFiles/_smoldyn.dir/Command.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/python/Command.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 95%] Building CXX object source/python/CMakeFiles/_smoldyn.dir/Simulation.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/g++ -D_smoldyn_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/external/pybind11/include -isystem /usr/include/python3.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -Wno-unused-parameter -Wall -Wextra -DSMOLDYN_VERSION=2.67.3 -DENABLE_PYTHON_CALLBACK -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT source/python/CMakeFiles/_smoldyn.dir/Simulation.cpp.o -MF CMakeFiles/_smoldyn.dir/Simulation.cpp.o.d -o CMakeFiles/_smoldyn.dir/Simulation.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/python/Simulation.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 96%] Building CXX object source/python/CMakeFiles/_smoldyn.dir/module.cpp.o cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/g++ -D_smoldyn_EXPORTS -I/builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve -I/builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn -I/builddir/build/BUILD/Smoldyn-2.67.3/build -I/usr/include/GL -I/builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume -I/builddir/build/BUILD/Smoldyn-2.67.3/source/external/pybind11/include -isystem /usr/include/python3.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -std=gnu++14 -fPIC -fvisibility=hidden -Wno-unused-parameter -Wall -Wextra -DSMOLDYN_VERSION=2.67.3 -DENABLE_PYTHON_CALLBACK -fvisibility=hidden -flto -fno-fat-lto-objects -MD -MT source/python/CMakeFiles/_smoldyn.dir/module.cpp.o -MF CMakeFiles/_smoldyn.dir/module.cpp.o.d -o CMakeFiles/_smoldyn.dir/module.cpp.o -c /builddir/build/BUILD/Smoldyn-2.67.3/source/python/module.cpp make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 97%] Linking CXX shared module /builddir/build/BUILD/Smoldyn-2.67.3/source/python/smoldyn/_smoldyn.cpython-311-i386-linux-gnu.so cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/_smoldyn.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DNDEBUG -flto -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -o /builddir/build/BUILD/Smoldyn-2.67.3/source/python/smoldyn/_smoldyn.cpython-311-i386-linux-gnu.so CMakeFiles/_smoldyn.dir/CallbackFunc.cpp.o CMakeFiles/_smoldyn.dir/Command.cpp.o CMakeFiles/_smoldyn.dir/Simulation.cpp.o CMakeFiles/_smoldyn.dir/module.cpp.o lib_pysmoldyn.a /usr/lib/libGL.so /usr/lib/libGLU.so -lglut /usr/lib/libtiff.so /usr/lib/libz.so cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/strip /builddir/build/BUILD/Smoldyn-2.67.3/source/python/smoldyn/_smoldyn.cpython-311-i386-linux-gnu.so make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /builddir/build/BUILD/Smoldyn-2.67.3/source/python/../Smoldyn/smoldyn.h:1044:16: warning: type 'struct simstruct' violates the C++ One Definition Rule [-Wodr] 1044 | typedef struct simstruct | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:1044:16: note: a different type is defined in another translation unit 1044 | typedef struct simstruct | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/python/../Smoldyn/smoldyn.h:1104:19: note: the first difference of corresponding definitions is field 'callbacks' 1104 | CallbackFunc* callbacks[MAX_PY_CALLBACK]; // Python callback. | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:1044:16: note: a type with different number of fields is defined in another translation unit 1044 | typedef struct simstruct | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:714:16: warning: type 'struct latticestruct' violates the C++ One Definition Rule [-Wodr] 714 | typedef struct latticestruct | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:714:16: note: a different type is defined in another translation unit 714 | typedef struct latticestruct | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:739:26: note: the first difference of corresponding definitions is field 'nsv' 739 | NextSubvolumeMethod* nsv; // nsv class | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:739:26: note: a field of same name but different type is defined in another translation unit 739 | NextSubvolumeMethod* nsv; // nsv class | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smoldyn.h:714:16: note: type name 'NextSubvolumeMethod' should match type name 'Kairos::NextSubvolumeMethod' 714 | typedef struct latticestruct | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume/NextSubvolumeMethod.h:137:7: note: the incompatible type is defined here 137 | class NextSubvolumeMethod | ^ /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c: In function 'boxesupdatelists': /builddir/build/BUILD/Smoldyn-2.67.3/source/Smoldyn/smolboxes.c:783:55: warning: argument 1 range [2147483648, 4294967294] exceeds maximum object size 2147483647 [-Walloc-size-larger-than=] 783 | bptr->neigh=(boxptr*) calloc(nneigh,sizeof(boxptr)); | ^ /usr/include/stdlib.h:675:14: note: in a call to allocation function 'calloc' declared here 675 | extern void *calloc (size_t __nmemb, size_t __size) | ^ make[1]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 97%] Built target _smoldyn make[1]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/python/CMakeFiles/copy_python_tree.dir/build.make source/python/CMakeFiles/copy_python_tree.dir/depend /usr/bin/make -f source/python/CMakeFiles/wheel.dir/build.make source/python/CMakeFiles/wheel.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python/CMakeFiles/wheel.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python/CMakeFiles/copy_python_tree.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/python/CMakeFiles/copy_python_tree.dir/build.make source/python/CMakeFiles/copy_python_tree.dir/build /usr/bin/make -f source/python/CMakeFiles/wheel.dir/build.make source/python/CMakeFiles/wheel.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 98%] Copying python source tree to binary directory cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/cmake -E copy_directory /builddir/build/BUILD/Smoldyn-2.67.3/source/python/smoldyn /builddir/build/BUILD/Smoldyn-2.67.3/build/py/smoldyn make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[1]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [100%] Built target copy_python_tree make[1]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [100%] Generating wheel in /builddir/build/BUILD/Smoldyn-2.67.3/build cd /builddir/build/BUILD/Smoldyn-2.67.3/build/py && /usr/bin/python3.11 setup.py bdist_wheel -d /builddir/build/BUILD/Smoldyn-2.67.3/build running bdist_wheel running build running build_py creating build creating build/lib.linux-i686-cpython-311 creating build/lib.linux-i686-cpython-311/smoldyn copying smoldyn/__init__.py -> build/lib.linux-i686-cpython-311/smoldyn copying smoldyn/__main__.py -> build/lib.linux-i686-cpython-311/smoldyn copying smoldyn/smoldyn.py -> build/lib.linux-i686-cpython-311/smoldyn copying smoldyn/types.py -> build/lib.linux-i686-cpython-311/smoldyn copying smoldyn/utils.py -> build/lib.linux-i686-cpython-311/smoldyn creating build/lib.linux-i686-cpython-311/smoldyn/biosimulators copying smoldyn/biosimulators/__init__.py -> build/lib.linux-i686-cpython-311/smoldyn/biosimulators copying smoldyn/biosimulators/__main__.py -> build/lib.linux-i686-cpython-311/smoldyn/biosimulators copying smoldyn/biosimulators/_version.py -> build/lib.linux-i686-cpython-311/smoldyn/biosimulators copying smoldyn/biosimulators/combine.py -> build/lib.linux-i686-cpython-311/smoldyn/biosimulators copying smoldyn/biosimulators/data_model.py -> build/lib.linux-i686-cpython-311/smoldyn/biosimulators copying smoldyn/biosimulators/utils.py -> build/lib.linux-i686-cpython-311/smoldyn/biosimulators copying smoldyn/_smoldyn.cpython-311-i386-linux-gnu.so -> build/lib.linux-i686-cpython-311/smoldyn running build_ext installing to build/bdist.linux-i686/wheel running install running install_lib creating build/bdist.linux-i686 creating build/bdist.linux-i686/wheel creating build/bdist.linux-i686/wheel/smoldyn copying build/lib.linux-i686-cpython-311/smoldyn/_smoldyn.cpython-311-i386-linux-gnu.so -> build/bdist.linux-i686/wheel/smoldyn creating build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/utils.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/data_model.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/combine.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/_version.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/__main__.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/__init__.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/utils.py -> build/bdist.linux-i686/wheel/smoldyn copying build/lib.linux-i686-cpython-311/smoldyn/types.py -> build/bdist.linux-i686/wheel/smoldyn copying build/lib.linux-i686-cpython-311/smoldyn/smoldyn.py -> build/bdist.linux-i686/wheel/smoldyn copying build/lib.linux-i686-cpython-311/smoldyn/__main__.py -> build/bdist.linux-i686/wheel/smoldyn copying build/lib.linux-i686-cpython-311/smoldyn/__init__.py -> build/bdist.linux-i686/wheel/smoldyn running install_egg_info running egg_info creating smoldyn.egg-info writing smoldyn.egg-info/PKG-INFO writing dependency_links to smoldyn.egg-info/dependency_links.txt writing requirements to smoldyn.egg-info/requires.txt writing top-level names to smoldyn.egg-info/top_level.txt writing manifest file 'smoldyn.egg-info/SOURCES.txt' reading manifest file 'smoldyn.egg-info/SOURCES.txt' writing manifest file 'smoldyn.egg-info/SOURCES.txt' Copying smoldyn.egg-info to build/bdist.linux-i686/wheel/smoldyn-2.67.3-py3.11.egg-info running install_scripts creating build/bdist.linux-i686/wheel/smoldyn-2.67.3.dist-info/WHEEL creating '/builddir/build/BUILD/Smoldyn-2.67.3/build/smoldyn-2.67.3-cp311-cp311-linux_i686.whl' and adding 'build/bdist.linux-i686/wheel' to it adding 'smoldyn/__init__.py' adding 'smoldyn/__main__.py' adding 'smoldyn/_smoldyn.cpython-311-i386-linux-gnu.so' adding 'smoldyn/smoldyn.py' adding 'smoldyn/types.py' adding 'smoldyn/utils.py' adding 'smoldyn/biosimulators/__init__.py' adding 'smoldyn/biosimulators/__main__.py' adding 'smoldyn/biosimulators/_version.py' adding 'smoldyn/biosimulators/combine.py' adding 'smoldyn/biosimulators/data_model.py' adding 'smoldyn/biosimulators/utils.py' adding 'smoldyn-2.67.3.dist-info/METADATA' adding 'smoldyn-2.67.3.dist-info/WHEEL' adding 'smoldyn-2.67.3.dist-info/top_level.txt' adding 'smoldyn-2.67.3.dist-info/RECORD' removing build/bdist.linux-i686/wheel make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/lib/python3.11/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer, pypa/build or other standards-based tools. Follow the current Python packaging guidelines when building Python RPM packages. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html and https://docs.fedoraproject.org/en-US/packaging-guidelines/Python/ for details. ******************************************************************************** !! self.initialize_options() make[1]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [100%] Built target wheel make[1]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/Smoldyn-2.67.3/build/CMakeFiles 0 make: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.gi5hg2 + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386 ++ dirname /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd Smoldyn-2.67.3 + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386 'INSTALL=/usr/bin/install -p' -C build make: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/cmake -S/builddir/build/BUILD/Smoldyn-2.67.3 -B/builddir/build/BUILD/Smoldyn-2.67.3/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/Smoldyn-2.67.3/build/CMakeFiles /builddir/build/BUILD/Smoldyn-2.67.3/build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/NextSubVolume/CMakeFiles/nsv.dir/build.make source/NextSubVolume/CMakeFiles/nsv.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/NextSubVolume /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/NextSubVolume /builddir/build/BUILD/Smoldyn-2.67.3/build/source/NextSubVolume/CMakeFiles/nsv.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/NextSubVolume/CMakeFiles/nsv.dir/build.make source/NextSubVolume/CMakeFiles/nsv.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Nothing to be done for 'source/NextSubVolume/CMakeFiles/nsv.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 9%] Built target nsv /usr/bin/make -f source/libSteve/CMakeFiles/Steve.dir/build.make source/libSteve/CMakeFiles/Steve.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/libSteve /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve /builddir/build/BUILD/Smoldyn-2.67.3/build/source/libSteve/CMakeFiles/Steve.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/libSteve/CMakeFiles/Steve.dir/build.make source/libSteve/CMakeFiles/Steve.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Nothing to be done for 'source/libSteve/CMakeFiles/Steve.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 29%] Built target Steve /usr/bin/make -f CMakeFiles/smoldyn_static.dir/build.make CMakeFiles/smoldyn_static.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/CMakeFiles/smoldyn_static.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f CMakeFiles/smoldyn_static.dir/build.make CMakeFiles/smoldyn_static.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Nothing to be done for 'CMakeFiles/smoldyn_static.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 49%] Built target smoldyn_static /usr/bin/make -f CMakeFiles/smoldyn_shared.dir/build.make CMakeFiles/smoldyn_shared.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/CMakeFiles/smoldyn_shared.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f CMakeFiles/smoldyn_shared.dir/build.make CMakeFiles/smoldyn_shared.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Nothing to be done for 'CMakeFiles/smoldyn_shared.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 69%] Built target smoldyn_shared /usr/bin/make -f CMakeFiles/smoldyn.dir/build.make CMakeFiles/smoldyn.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/CMakeFiles/smoldyn.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f CMakeFiles/smoldyn.dir/build.make CMakeFiles/smoldyn.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Nothing to be done for 'CMakeFiles/smoldyn.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 71%] Built target smoldyn /usr/bin/make -f source/python/CMakeFiles/_pysmoldyn.dir/build.make source/python/CMakeFiles/_pysmoldyn.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python/CMakeFiles/_pysmoldyn.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/python/CMakeFiles/_pysmoldyn.dir/build.make source/python/CMakeFiles/_pysmoldyn.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Nothing to be done for 'source/python/CMakeFiles/_pysmoldyn.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 91%] Built target _pysmoldyn /usr/bin/make -f source/python/CMakeFiles/_smoldyn.dir/build.make source/python/CMakeFiles/_smoldyn.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python/CMakeFiles/_smoldyn.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/python/CMakeFiles/_smoldyn.dir/build.make source/python/CMakeFiles/_smoldyn.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[2]: Nothing to be done for 'source/python/CMakeFiles/_smoldyn.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 97%] Built target _smoldyn /usr/bin/make -f source/python/CMakeFiles/copy_python_tree.dir/build.make source/python/CMakeFiles/copy_python_tree.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python/CMakeFiles/copy_python_tree.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/python/CMakeFiles/copy_python_tree.dir/build.make source/python/CMakeFiles/copy_python_tree.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 98%] Copying python source tree to binary directory cd /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python && /usr/bin/cmake -E copy_directory /builddir/build/BUILD/Smoldyn-2.67.3/source/python/smoldyn /builddir/build/BUILD/Smoldyn-2.67.3/build/py/smoldyn make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [ 98%] Built target copy_python_tree /usr/bin/make -f source/python/CMakeFiles/wheel.dir/build.make source/python/CMakeFiles/wheel.dir/depend make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' cd /builddir/build/BUILD/Smoldyn-2.67.3/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/Smoldyn-2.67.3 /builddir/build/BUILD/Smoldyn-2.67.3/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python/CMakeFiles/wheel.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/make -f source/python/CMakeFiles/wheel.dir/build.make source/python/CMakeFiles/wheel.dir/build make[2]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [100%] Generating wheel in /builddir/build/BUILD/Smoldyn-2.67.3/build cd /builddir/build/BUILD/Smoldyn-2.67.3/build/py && /usr/bin/python3.11 setup.py bdist_wheel -d /builddir/build/BUILD/Smoldyn-2.67.3/build running bdist_wheel running build running build_py running build_ext /usr/lib/python3.11/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer, pypa/build or other standards-based tools. Follow the current Python packaging guidelines when building Python RPM packages. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html and https://docs.fedoraproject.org/en-US/packaging-guidelines/Python/ for details. ******************************************************************************** !! self.initialize_options() installing to build/bdist.linux-i686/wheel running install running install_lib creating build/bdist.linux-i686/wheel creating build/bdist.linux-i686/wheel/smoldyn copying build/lib.linux-i686-cpython-311/smoldyn/_smoldyn.cpython-311-i386-linux-gnu.so -> build/bdist.linux-i686/wheel/smoldyn creating build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/utils.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/data_model.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/combine.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/_version.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/__main__.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/biosimulators/__init__.py -> build/bdist.linux-i686/wheel/smoldyn/biosimulators copying build/lib.linux-i686-cpython-311/smoldyn/utils.py -> build/bdist.linux-i686/wheel/smoldyn copying build/lib.linux-i686-cpython-311/smoldyn/types.py -> build/bdist.linux-i686/wheel/smoldyn copying build/lib.linux-i686-cpython-311/smoldyn/smoldyn.py -> build/bdist.linux-i686/wheel/smoldyn copying build/lib.linux-i686-cpython-311/smoldyn/__main__.py -> build/bdist.linux-i686/wheel/smoldyn copying build/lib.linux-i686-cpython-311/smoldyn/__init__.py -> build/bdist.linux-i686/wheel/smoldyn running install_egg_info running egg_info writing smoldyn.egg-info/PKG-INFO writing dependency_links to smoldyn.egg-info/dependency_links.txt writing requirements to smoldyn.egg-info/requires.txt writing top-level names to smoldyn.egg-info/top_level.txt reading manifest file 'smoldyn.egg-info/SOURCES.txt' writing manifest file 'smoldyn.egg-info/SOURCES.txt' Copying smoldyn.egg-info to build/bdist.linux-i686/wheel/smoldyn-2.67.3-py3.11.egg-info running install_scripts creating build/bdist.linux-i686/wheel/smoldyn-2.67.3.dist-info/WHEEL creating '/builddir/build/BUILD/Smoldyn-2.67.3/build/smoldyn-2.67.3-cp311-cp311-linux_i686.whl' and adding 'build/bdist.linux-i686/wheel' to it adding 'smoldyn/__init__.py' adding 'smoldyn/__main__.py' adding 'smoldyn/_smoldyn.cpython-311-i386-linux-gnu.so' adding 'smoldyn/smoldyn.py' adding 'smoldyn/types.py' adding 'smoldyn/utils.py' adding 'smoldyn/biosimulators/__init__.py' adding 'smoldyn/biosimulators/__main__.py' adding 'smoldyn/biosimulators/_version.py' adding 'smoldyn/biosimulators/combine.py' adding 'smoldyn/biosimulators/data_model.py' adding 'smoldyn/biosimulators/utils.py' adding 'smoldyn-2.67.3.dist-info/METADATA' adding 'smoldyn-2.67.3.dist-info/WHEEL' adding 'smoldyn-2.67.3.dist-info/top_level.txt' adding 'smoldyn-2.67.3.dist-info/RECORD' removing build/bdist.linux-i686/wheel make[2]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' [100%] Built target wheel make[1]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/Smoldyn-2.67.3/build/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' make[1]: Nothing to be done for 'preinstall'. make[1]: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/bin/smoldyn -- Installing: /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/lib/libsmoldyn_shared.so.2.67.3 -- Installing: /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/lib/libsmoldyn_shared.so.2 -- Installing: /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/lib/libsmoldyn_shared.so -- Installing: /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/lib/libsmoldyn_static.a -- Installing: /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/include/smoldyn/libsmoldyn.h -- Installing: /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/include/smoldyn/smoldyn.h -- Installing: /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/include/smoldyn/smoldynconfigure.h make: Leaving directory '/builddir/build/BUILD/Smoldyn-2.67.3/build' + pushd build/py ~/build/BUILD/Smoldyn-2.67.3/build/py ~/build/BUILD/Smoldyn-2.67.3 + mkdir -p /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/lib/python3.11/site-packages + cp -a smoldyn smoldyn.egg-info /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/lib/python3.11/site-packages/ + popd ~/build/BUILD/Smoldyn-2.67.3 + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 2.67.3-4.fc39 --unique-debug-suffix -2.67.3-4.fc39.i386 --unique-debug-src-base smoldyn-2.67.3-4.fc39.i386 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/Smoldyn-2.67.3 extracting debug info from /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/bin/smoldyn extracting debug info from /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/lib/libsmoldyn_shared.so.2.67.3 original debug info size: 4604kB, size after compression: 4236kB /usr/bin/sepdebugcrcfix: Updated 2 CRC32s, 0 CRC32s did match. 3516 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 Bytecompiling .py files below /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/lib/python3.11 using python3.11 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.uv4tH2 + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m32 -march=i686 -mtune=generic -msse2 -mfpmath=sse -mstackrealign -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd Smoldyn-2.67.3 + cd build + export LD_LIBRARY_PATH=/builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/lib + LD_LIBRARY_PATH=/builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/lib + export PYTHONPATH=/builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/lib/python3.11/site-packages + PYTHONPATH=/builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/lib/python3.11/site-packages + xvfb-run ctest -j1 -VV -R 'test_api|test_sanity|test_biosimulator' --output-on-failure --debug /builddir/build/BUILD/cmake-3.26.3/Source/cmCTest.cxx:422 Here: 422 /builddir/build/BUILD/cmake-3.26.3/Source/cmCTest.cxx:707 UpdateCTestConfiguration from :/builddir/build/BUILD/Smoldyn-2.67.3/build/DartConfiguration.tcl /builddir/build/BUILD/cmake-3.26.3/Source/cmCTest.cxx:434 Here: 434 /builddir/build/BUILD/cmake-3.26.3/Source/cmCTest.cxx:3034 * Read custom CTest configuration directory: /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/cmake-3.26.3/Source/cmCTest.cxx:3039 * Check for file: /builddir/build/BUILD/Smoldyn-2.67.3/build/CTestCustom.cmake /builddir/build/BUILD/cmake-3.26.3/Source/cmCTest.cxx:3059 * Check for file: /builddir/build/BUILD/Smoldyn-2.67.3/build/CTestCustom.ctest /builddir/build/BUILD/cmake-3.26.3/Source/cmCTest.cxx:707 UpdateCTestConfiguration from :/builddir/build/BUILD/Smoldyn-2.67.3/build/DartConfiguration.tcl /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:402 Test project /builddir/build/BUILD/Smoldyn-2.67.3/build /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:1783 Constructing a list of tests /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2387 Add test: test_actions /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2430 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2387 Add test: test_api /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2430 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2387 Add test: test_biosimulators /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2430 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2387 Add test: test_concurrent_simulation /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2430 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2387 Add test: test_connect_func /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2430 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2387 Add test: test_connect_var /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2430 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2387 Add test: test_data_in_array /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2430 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2387 Add test: test_data_outputfile /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2430 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2387 Add test: test_getters /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2430 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2387 Add test: test_issue_118 /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2430 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2387 Add test: test_libsmoldyn /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2430 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2387 Add test: test_multiple_iterations /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2430 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2387 Add test: test_prd_placement /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2430 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2387 Add test: test_sanity /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2430 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2387 Add test: test_sim_from_file /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:2430 Set test directory: /builddir/build/BUILD/Smoldyn-2.67.3/build/source/python /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:1834 Done constructing a list of tests /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:978 Updating test list for fixtures /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:1201 Added 0 tests to meet fixture requirements /builddir/build/BUILD/cmake-3.26.3/Source/cmCTest.cxx:307 Current_Time: May 18 19:15 UTC /builddir/build/BUILD/cmake-3.26.3/Source/cmCTest.cxx:307 Current_Time: May 18 19:15 UTC /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestMultiProcessHandler.cxx:1412 Checking test dependency graph... /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestMultiProcessHandler.cxx:1441 Checking test dependency graph end /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestMultiProcessHandler.cxx:167 test 2 /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:518 Start 2: test_api /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:687 2: Test command: /usr/bin/python3.11 "/builddir/build/BUILD/Smoldyn-2.67.3/tests/test_api.py" /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:695 2: Working Directory: /builddir/build/BUILD/Smoldyn-2.67.3/tests /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:703 2: Environment variables: /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:708 2: PYTHONPATH=/builddir/build/BUILD/Smoldyn-2.67.3/build/py /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:708 2: SMOLDYN_NO_PROMPT=1 /builddir/build/BUILD/cmake-3.26.3/Source/cmCTest.cxx:307 Current_Time: May 18 19:15 UTC /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:777 2: Test timeout computed to be: 10000000 /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:949 1/3 Test #2: test_api ......................... /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:952 Testing test_api ... /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:255 Passed 0.21 sec /builddir/build/BUILD/cmake-3.26.3/Source/cmCTest.cxx:307 Current_Time: May 18 19:15 UTC /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestMultiProcessHandler.cxx:167 test 3 /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:518 Start 3: test_biosimulators /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:687 3: Test command: /usr/bin/python3.11 "/builddir/build/BUILD/Smoldyn-2.67.3/tests/test_biosimulators.py" /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:695 3: Working Directory: /builddir/build/BUILD/Smoldyn-2.67.3/tests /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:703 3: Environment variables: /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:708 3: PYTHONPATH=/builddir/build/BUILD/Smoldyn-2.67.3/build/py /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:708 3: SMOLDYN_NO_PROMPT=1 /builddir/build/BUILD/cmake-3.26.3/Source/cmCTest.cxx:307 Current_Time: May 18 19:15 UTC /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:777 3: Test timeout computed to be: 10000000 /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:42 3: ssssssssssssssssssssssss /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:42 3: ---------------------------------------------------------------------- /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:42 3: Ran 24 tests in 0.000s /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:42 3: /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:42 3: OK (skipped=24) /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:949 2/3 Test #3: test_biosimulators ............... /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:952 Testing test_biosimulators ... /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:255 Passed 0.24 sec /builddir/build/BUILD/cmake-3.26.3/Source/cmCTest.cxx:307 Current_Time: May 18 19:15 UTC /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestMultiProcessHandler.cxx:167 test 14 /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:518 Start 14: test_sanity /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:687 14: Test command: /usr/bin/python3.11 "/builddir/build/BUILD/Smoldyn-2.67.3/tests/test_sanity.py" /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:695 14: Working Directory: /builddir/build/BUILD/Smoldyn-2.67.3/tests /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:703 14: Environment variables: /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:708 14: PYTHONPATH=/builddir/build/BUILD/Smoldyn-2.67.3/build/py /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:708 14: SMOLDYN_NO_PROMPT=1 /builddir/build/BUILD/cmake-3.26.3/Source/cmCTest.cxx:307 Current_Time: May 18 19:15 UTC /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:777 14: Test timeout computed to be: 10000000 /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:42 14: Using smoldyn from /builddir/build/BUILD/Smoldyn-2.67.3/build/py/smoldyn/__init__.py /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:42 14: test_newcursim /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:42 14: /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:42 14: Testing test_get_err /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:42 14: (, '') /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:949 3/3 Test #14: test_sanity ...................... /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:952 Testing test_sanity ... /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestRunTest.cxx:255 Passed 0.19 sec /builddir/build/BUILD/cmake-3.26.3/Source/cmCTest.cxx:307 Current_Time: May 18 19:15 UTC /builddir/build/BUILD/cmake-3.26.3/Source/cmCTest.cxx:307 Current_Time: May 18 19:15 UTC /builddir/build/BUILD/cmake-3.26.3/Source/cmCTest.cxx:307 Current_Time: May 18 19:15 UTC /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:441 The following tests passed: /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:446 test_api /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:446 test_biosimulators /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:446 test_sanity /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:607 100% tests passed, 0 tests failed out of 3 /builddir/build/BUILD/cmake-3.26.3/Source/CTest/cmCTestTestHandler.cxx:623 Total Test time (real) = 0.64 sec + RPM_EC=0 ++ jobs -p + exit 0 Processing files: smoldyn-2.67.3-4.fc39.i686 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.Ziq7bh + umask 022 + cd /builddir/build/BUILD + cd Smoldyn-2.67.3 + DOCDIR=/builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/share/doc/smoldyn + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/share/doc/smoldyn + cp -pr Using-Smoldyn-with-SED-ML-COMBINE-BioSimulators.md /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/share/doc/smoldyn + cp -pr README.md /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/share/doc/smoldyn + RPM_EC=0 ++ jobs -p + exit 0 Provides: bundled(SFMT) = 1.3.3 smoldyn = 2.67.3-4.fc39 smoldyn(x86-32) = 2.67.3-4.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1.3) libc.so.6(GLIBC_2.3.4) libc.so.6(GLIBC_2.34) libc.so.6(GLIBC_2.4) libgcc_s.so.1 libgcc_s.so.1(GCC_3.0) libsmoldyn_shared.so.2 libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) rtld(GNU_HASH) Processing files: smoldyn-doc-2.67.3-4.fc39.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.IbPQ64 + umask 022 + cd /builddir/build/BUILD + cd Smoldyn-2.67.3 + DOCDIR=/builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/share/doc/smoldyn-doc + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/share/doc/smoldyn-doc + cp -pr docs/BioNetGen docs/CMakeLists.txt docs/Doxyfile.in docs/README.md docs/SmolCrowd docs/SmolEmulate docs/Smoldyn docs/_static docs/build_doxygen docs/conf.py docs/doxygen docs/examples docs/index.rst docs/libSteve docs/python docs/requirements.txt docs/tikz docs/user docs/wrl2smol /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/share/doc/smoldyn-doc + RPM_EC=0 ++ jobs -p + exit 0 Provides: smoldyn-doc = 2.67.3-4.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: smoldyn-libs-2.67.3-4.fc39.i686 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.DQ3Cza + umask 022 + cd /builddir/build/BUILD + cd Smoldyn-2.67.3 + LICENSEDIR=/builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/share/licenses/smoldyn-libs + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/share/licenses/smoldyn-libs + cp -pr License.txt /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/share/licenses/smoldyn-libs + cp -pr source/libSteve/SFMT/SFMT-LICENSE.txt /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/share/licenses/smoldyn-libs + cp -pr LICENSE /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/share/licenses/smoldyn-libs + RPM_EC=0 ++ jobs -p + exit 0 Provides: libsmoldyn_shared.so.2 smoldyn-libs = 2.67.3-4.fc39 smoldyn-libs(x86-32) = 2.67.3-4.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: glibc >= 2.37.9000-10 libGL.so.1 libGLU.so.1 libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1) libc.so.6(GLIBC_2.1.3) libc.so.6(GLIBC_2.3) libc.so.6(GLIBC_2.3.4) libc.so.6(GLIBC_2.38) libc.so.6(GLIBC_2.4) libc.so.6(GLIBC_2.7) libgcc_s.so.1 libgcc_s.so.1(GCC_3.0) libgcc_s.so.1(GCC_3.3.1) libgcc_s.so.1(GLIBC_2.0) libglut.so.3 libm.so.6 libm.so.6(GLIBC_2.0) libm.so.6(GLIBC_2.1) libm.so.6(GLIBC_2.29) libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(CXXABI_1.3.8) libstdc++.so.6(CXXABI_1.3.9) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.21) libstdc++.so.6(GLIBCXX_3.4.29) libstdc++.so.6(GLIBCXX_3.4.30) libstdc++.so.6(GLIBCXX_3.4.32) libstdc++.so.6(GLIBCXX_3.4.9) libtiff.so.6 libtiff.so.6(LIBTIFF_4.0) rtld(GNU_HASH) Processing files: smoldyn-libs-devel-2.67.3-4.fc39.i686 Provides: smoldyn-libs-devel = 2.67.3-4.fc39 smoldyn-libs-devel(x86-32) = 2.67.3-4.fc39 smoldyn-libs-static = 0:2.67.3-4.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: libsmoldyn_shared.so.2 Processing files: python3-smoldyn-2.67.3-4.fc39.i686 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.a3jcyh + umask 022 + cd /builddir/build/BUILD + cd Smoldyn-2.67.3 + LICENSEDIR=/builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/share/licenses/python3-smoldyn + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/share/licenses/python3-smoldyn + cp -pr License.txt /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/share/licenses/python3-smoldyn + cp -pr source/libSteve/SFMT/SFMT-LICENSE.txt /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/share/licenses/python3-smoldyn + cp -pr LICENSE /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386/usr/share/licenses/python3-smoldyn + RPM_EC=0 ++ jobs -p + exit 0 Provides: python-smoldyn = 2.67.3-4.fc39 python3-smoldyn = 2.67.3-4.fc39 python3-smoldyn(x86-32) = 2.67.3-4.fc39 python3.11-smoldyn = 2.67.3-4.fc39 python3.11dist(smoldyn) = 2.67.3 python3dist(smoldyn) = 2.67.3 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: glibc >= 2.37.9000-10 libGL.so.1 libGLU.so.1 libc.so.6 libc.so.6(GLIBC_2.0) libc.so.6(GLIBC_2.1) libc.so.6(GLIBC_2.1.3) libc.so.6(GLIBC_2.3) libc.so.6(GLIBC_2.3.4) libc.so.6(GLIBC_2.32) libc.so.6(GLIBC_2.38) libc.so.6(GLIBC_2.4) libc.so.6(GLIBC_2.7) libgcc_s.so.1 libgcc_s.so.1(GCC_3.0) libgcc_s.so.1(GCC_3.3.1) libgcc_s.so.1(GLIBC_2.0) libglut.so.3 libm.so.6 libm.so.6(GLIBC_2.0) libm.so.6(GLIBC_2.1) libm.so.6(GLIBC_2.29) libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(CXXABI_1.3.13) libstdc++.so.6(CXXABI_1.3.2) libstdc++.so.6(CXXABI_1.3.3) libstdc++.so.6(CXXABI_1.3.5) libstdc++.so.6(CXXABI_1.3.8) libstdc++.so.6(CXXABI_1.3.9) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.18) libstdc++.so.6(GLIBCXX_3.4.20) libstdc++.so.6(GLIBCXX_3.4.21) libstdc++.so.6(GLIBCXX_3.4.29) libstdc++.so.6(GLIBCXX_3.4.30) libstdc++.so.6(GLIBCXX_3.4.32) libstdc++.so.6(GLIBCXX_3.4.9) libtiff.so.6 libtiff.so.6(LIBTIFF_4.0) python(abi) = 3.11 rtld(GNU_HASH) Obsoletes: python-smoldyn < 2.67.3-4.fc39 Processing files: smoldyn-debugsource-2.67.3-4.fc39.i686 Provides: smoldyn-debugsource = 2.67.3-4.fc39 smoldyn-debugsource(x86-32) = 2.67.3-4.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: smoldyn-debuginfo-2.67.3-4.fc39.i686 Provides: debuginfo(build-id) = 80ece372dc8c410551bec0f1d3fd878aa21a09e6 smoldyn-debuginfo = 2.67.3-4.fc39 smoldyn-debuginfo(x86-32) = 2.67.3-4.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: smoldyn-debugsource(x86-32) = 2.67.3-4.fc39 Processing files: smoldyn-libs-debuginfo-2.67.3-4.fc39.i686 Provides: debuginfo(build-id) = e8f302bf583c3645da07cb688a27f43d84ad5174 libsmoldyn_shared.so.2.67.3-2.67.3-4.fc39.i386.debug smoldyn-libs-debuginfo = 2.67.3-4.fc39 smoldyn-libs-debuginfo(x86-32) = 2.67.3-4.fc39 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: smoldyn-debugsource(x86-32) = 2.67.3-4.fc39 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386 Wrote: /builddir/build/RPMS/smoldyn-libs-debuginfo-2.67.3-4.fc39.i686.rpm Wrote: /builddir/build/RPMS/python3-smoldyn-2.67.3-4.fc39.i686.rpm Wrote: /builddir/build/RPMS/smoldyn-libs-devel-2.67.3-4.fc39.i686.rpm Wrote: /builddir/build/RPMS/smoldyn-debugsource-2.67.3-4.fc39.i686.rpm Wrote: /builddir/build/RPMS/smoldyn-libs-2.67.3-4.fc39.i686.rpm Wrote: /builddir/build/RPMS/smoldyn-debuginfo-2.67.3-4.fc39.i686.rpm Wrote: /builddir/build/RPMS/smoldyn-2.67.3-4.fc39.i686.rpm Wrote: /builddir/build/RPMS/smoldyn-doc-2.67.3-4.fc39.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.tY4UvO + umask 022 + cd /builddir/build/BUILD + cd Smoldyn-2.67.3 + /usr/bin/rm -rf /builddir/build/BUILDROOT/smoldyn-2.67.3-4.fc39.i386 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.nt2xHk + umask 022 + cd /builddir/build/BUILD + rm -rf Smoldyn-2.67.3 Smoldyn-2.67.3.gemspec + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: %patchN is deprecated (6 usages found), use %patch N (or %patch -P N) Finish: rpmbuild smoldyn-2.67.3-4.fc39.src.rpm Finish: build phase for smoldyn-2.67.3-4.fc39.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-i686-1684437149.692264/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-i686-1684437149.692264/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-i686-1684437149.692264/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/smoldyn-2.67.3-4.fc39.src.rpm) Config(child) 2 minutes 50 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool